[Pdbwiki-devel] PDBWiki now running on the bifx.org server

[Dan Bolser]

On 17 December 2010 23:08, Jose M. Duarte <jose.m.duarte at gmail.com> wrote:
> Actually just tried commenting out the conditional expression and links are
> fine now! So basically we have the normal wgScriptPath=""
>
> I don't understand why though! so don't ask me ;)

I don't know if my brain is making things up... but this exchange
rings a bell... I guess you live and learn... or live and forget in
this case ;-)



> Jose
>
>
>
>
>
> On 17 December 2010 23:52, Dan Bolser <dan.bolser at gmail.com> wrote:
>>
>> On 17 December 2010 21:33, Jose M. Duarte <jose.m.duarte at gmail.com> wrote:
>> > Ooops there is a problem, just realised by chance. All links on the Main
>> > Page are like
>> >
>> > http://pdbwiki.org/~hstehr/pdbwiki/mediawiki-1.15/index.php/2pdt
>> >
>> > So they don't work at all. Links in other pages seem to be fine.
>> >
>> > Could this have something to do with that conditional expression for
>> > wgScriptPath? First thing that comes to mind
>>
>> Yeah, that sprang to my mind too... however, the links work fine for
>> me. I just clicked the one in this email and it get re-written to the
>> appropriate new URL (which is weird).
>>
>> I remember this from last time, but (naturally) I have forgotten what
>> triggers it / how to control it... I think it's todo with the short
>> url scheme...
>>
>> http://www.mediawiki.org/wiki/Manual:Short_URL
>>
>>
>> > Jose
>> >
>> >
>> >
>> > On 17 December 2010 20:11, Dan Bolser <dan.bolser at gmail.com> wrote:
>> >>
>> >> On 17 December 2010 18:47, Jose M. Duarte <jose.m.duarte at gmail.com>
>> >> wrote:
>> >> > Nice one! thanks for the good work.
>> >> >
>> >> > Next thing will be to test the update pipeline. Let's see if it works
>> >> > from
>> >> > MPI this coming Monday. If it does we can then start testing it from
>> >> > bio.cc
>> >>
>> >> It was running in this mode previously iirc, so it *should* work ;-)
>> >>
>> >>
>> >> Cheers Jose!
>> >> Dan.
>> >>
>> >> > Jose
>> >> >
>> >> >
>> >> >
>> >> > On 17 December 2010 18:44, Dan Bolser <dan.bolser at gmail.com> wrote:
>> >> >>
>> >> >> Seems the DNS records have finally updated, and http://PDBWiki.Org
>> >> >> is
>> >> >> now being served from the httpd://bifx.org httpd server.
>> >> >>
>> >> >> So far everything looks good!
>> >> >>
>> >> >>
>> >> >> It took me longer than expected to decipher the Apache configuration
>> >> >> on dallas0 (even though I have used it in anger several times
>> >> >> before).
>> >> >> To help, I've updated some of the information here:
>> >> >>
>> >> >>
>> >> >>
>> >> >> http://www.bioinformatics.org/wiki/Bioinformatics.Org_Wiki:Configuration
>> >> >>
>> >> >>
>> >> >> I particularly like this nugget of information:
>> >> >>
>> >> >> /var/log/httpd -> /etc/httpd/logs
>> >> >> /etc/httpd -> /usr/local/apache
>> >> >> /usr/local -> /home/local
>> >> >>
>> >> >>
>> >> >> which I should probably describe with examples like the .config file
>> >> >> redirects, but you get the general idea ;-)
>> >> >>
>> >> >>
>> >> >> Please let me know if you find any problems.
>> >> >>
>> >> >> Dan.
>> >> >>
>> >> >> _______________________________________________
>> >> >> Pdbwiki-devel mailing list
>> >> >> Pdbwiki-devel at bioinformatics.org
>> >> >> http://www.bioinformatics.org/mailman/listinfo/pdbwiki-devel
>> >> >> http://www.pdbwiki.org
>> >> >
>> >> >
>> >
>> >
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