[Pdbwiki-devel] Move of upload pipeline

[Dan Bolser]

Thanks Jose!



On 21 December 2010 17:06, Jose M. Duarte <jose.m.duarte at gmail.com> wrote:
> bifx.org
>
>
> On 21 December 2010 18:04, Henning Stehr <stehr at molgen.mpg.de> wrote:
>>
>> Thanks Jose!
>>
>> Did you check in to the SVN on bifx.org or still on talyn?
>>
>> Have a good holiday!
>>
>> Henning
>>
>> On Tue, Dec 21, 2010 at 5:58 PM, Jose M. Duarte <jose.m.duarte at gmail.com>
>> wrote:
>> > Hi guys
>> >
>> > So I've tried for the first time the upload pipeline from bio.cc. I
>> > basically only needed changing a few hard coded paths and the table
>> > names to
>> > capitals.
>> >
>> > I've run it testing against pdbwiki.molgen.mpg.de (still up) and it
>> > worked.
>> > The thing is that the the pdbwiki.molgen was more up to date than the
>> > pdbase
>> > in bio.cc so it only needed to remove entries, so it's not a full test
>> > yet
>> > (and it's still running now). But it's a start at least. By the way I've
>> > modified the paths and all that in the repo so if we svn update at the
>> > mpimg
>> > site it will overwrite the files with wrong paths and all that.
>> >
>> > For the moment we at least have things more or less set-up so that we
>> > can
>> > start running it from bio.cc regularly soon. The cronjob at mpimg is
>> > still
>> > on anyway.
>> >
>> > For info pipeline files are in /BiO/Store/PDBWiki/ with more or less the
>> > same layout as before.
>> >
>> > That's it for now, I'm off home tomorrow. Hope you guys enjoy the
>> > holidays!
>> > (I'll be reading email but less regularly)
>> >
>> > Jose
>> >
>> >
>> > _______________________________________________
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>> > Pdbwiki-devel at bioinformatics.org
>> > http://www.bioinformatics.org/mailman/listinfo/pdbwiki-devel
>> > http://www.pdbwiki.org
>> >
>> >
>
>
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