[Pdbwiki-devel] taking and updating wikipedia genes to PDBwiki

Dan Bolser dan.bolser at gmail.com
Sun Dec 25 09:28:57 EST 2011


Wow, two years have passed already, and I haven't looked at doing any of
this! We need an international PDBWiki week once a year to focus our
attention!

Maybe some time in March?

Happy Christmas!
Dan.
On 27 Dec 2010 04:05, "Jong Bhak" <jongbhak at gmail.com> wrote:

> Thanks. Also, Jmol on the site will be good. To turn them
> around a bit.
> Cheers
>
> Jong
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> On Mon, Dec 27, 2010 at 6:56 AM, Dan Bolser <dan.bolser at gmail.com> wrote:
>
>> Hi Jong,
>>
>> Yup, all this is possible. I like the idea to add links to Wikipedia
>> from PDBWiki.
>>
>> We do have the EC terms in PDBWiki as categories, but we didn't add GO
>> because its a 'different kind of category'... for this we were
>> thinking of developing PDBWiki using the functionality of Semantic
>> MediaWiki, but we haven't really worked out how to do that 'properly'.
>> I guess we should rather do it piecemeal and see what works?
>>
>>
>> Happy X-mass and new-year to you too!
>>
>>
>> Dan.
>>
>> On 26 December 2010 16:47, Jong Bhak <jongbhak at gmail.com> wrote:
>> > Hi Dan,
>> >
>> > Can you copy wikipedia's gene and protein names that appear in PDBwiki
>> > and actually store them in PDBwiki? And make a script that automates
>> > the text every month?
>> >
>> > Also, can you add Wikipedia's link to PDB entries under Links section?
>> >
>> > Also, can you make a fuctional category in PDBwiki using GO?
>> > and put lists of genes/proteins in the category so that I can
>> > browser functionally linked 3D domains with annotated information?
>> >
>> > Thanks
>> >
>> > Happy new year!
>> > Jong
>> >
>> >
>> >
>> >
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