[ssml] Calibrating homology searches - Looking for code

Dan Bolser dmb at mrc-dunn.cam.ac.uk
Thu Dec 11 09:33:44 EST 2003


I may be totally wrong, but I think that when you run the ncbi prog. formatdb, it is
generating such statistics from your database.



++ Georg Fuellen--
>
> Dear All,
>
> We are looking for generic code that can be used to calibrate
> a homology search by fitting score distributions to the extreme value
> distribution, abstracting from e.g. the "hmmcalibrate" subroutine. We would
> appreciate help very much - any helpful hints would be nice!
>
> Georg Fuellen / Intikhab Alam
>
>
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