ABA signaling Related Sildes (Wild type only) | |
Slide Name | Source |
Hoth_ABA50_mM_3#5hours | Hoth et al(2002) |
Li_ABA_10uM_0#6hours | Li et al(2006) |
ME00333_ABA_10uM_1hours | TAIR microarray experiment ME00333 |
ME00333_ABA_10uM_30minutes | TAIR microarray experiment ME00334 |
ME00333_ABA_10uM_3hours | TAIR microarray experiment ME00335 |
ME00351_ABA_30uM_24hour | TAIR microarray experiment id ME00351 |
ME00351_ABA_3uM_24hours | TAIR microarray experiment id ME00352 |
seki_ABA_100uM_01h | Seki et al(2002) |
seki_ABA_100uM_02hours | Seki et al(2002) |
seki_ABA_100uM_05h | Seki et al(2002) |
seki_ABA_100uM_10h | Seki et al (2002) |
seki_ABA_100uM_24h | Seki et al(2002) |
xin_ABA_1uM_4h | Xin et al (2005) |
ABA signaling Related Sildes (All data) | |
Slide Name | Source |
Hoth_ABA50_mM_3#5hours | Hoth et al(2002) |
Hoth#abi1_mutant | Hoth et al(2002) |
Li_ABA_10uM_0#6hours | Li et al(2006) |
ME00333_ABA_10uM_1hours | TAIR microarray experiment ME00333 |
ME00333_ABA_10uM_30minutes | TAIR microarray experiment ME00334 |
ME00333_ABA_10uM_3hours | TAIR microarray experiment ME00335 |
ME00351_ABA_30uM_24hour | TAIR microarray experiment id ME00351 |
ME00351_ABA_3uM_24hours | TAIR microarray experiment id ME00352 |
seki_ABA_100uM_01h | Seki et al(2002) |
seki_ABA_100uM_02hours | Seki et al(2002) |
seki_ABA_100uM_05h | Seki et al(2002) |
seki_ABA_100uM_10h | Seki et al (2002) |
seki_ABA_100uM_24h | Seki et al(2002) |
xin_ABA_1uM_4h | Xin et al (2005) |
Xin#rop10mutant | Xin et al (2005) |
Sanchez#ABA#2h | Sanchez et al (2005) |
Sanchez#ABA#6h | Sanchez et al(2005) |
Sanchez#cADPR#6h | Sanchez et al (2005) |
Suzuki# ABA_effect_ abi3 | Suzuki et al (2003) |
Suzuki# ABA_effect_ VP1 | Suzuki et al (2003) |
Suzuki# abi3_ noABA | Suzuki et al (2003) |
Suzuki# abi3_ plusABA | Suzuki et al (2003) |
Abiotic Stress | |||
Slide header | Brief description | Experiment ID | TAIR experiment ID |
cold_30min_root | cold(4 C, 30minutes)root | ME00325r | 1007966553#975 |
cold_1h_root | cold(4 C, 1hours)root | ME00325r | 1007966553#977 |
cold_3h_root | cold(4 C, 3hours)root | ME00325r | 1007966553#979 |
cold_6h_root | cold(4 C, 6hours)root | ME00325r | 1007966553#981 |
cold_12h_root | cold(4 C, 12hours)root | ME00325r | 1007966553#983 |
cold_24h_root | cold(4 C, 24hours)root | ME00325r | 1007966553#985 |
cold_30min_shoot | cold(4 C, 30minutes)shoot | ME00325s | 1007966553#974 |
cold_1h_shoot | cold(4 C, 1hours)shoot | ME00325s | 1007966553#976 |
cold_3h_shoot | cold(4 C, 3hours)shoot | ME00325s | 1007966553#978 |
cold_6h_shoot | cold(4 C, 6hours)shoot | ME00325s | 1007966553#980 |
cold_12h_shoot | cold(4 C, 12hours)shoot | ME00325s | 1007966553#982 |
cold_24h_shoot | cold(4 C, 24hours)shoot | ME00325s | 1007966553#984 |
drought_12h_root | time after treatment(12 hrhours)rootdry air stream(15minutes) | ME00338r | 1007966668#1016 |
drought_15min_root | time after treatment(15 minminutes)rootdry air stream(15minutes) | ME00338r | 1007966668#1018 |
drought_1h_root | time after treatment(1 hrhours)rootdry air stream(15minutes) | ME00338r | 1007966668#1020 |
drought_24h_root | time after treatment(24 hrhours)rootdry air stream(15minutes) | ME00338r | 1007966668#1022 |
drought_30min_root | time after treatment(30 minminutes)rootdry air stream(15minutes) | ME00338r | 1007966668#1024 |
drought_3h_root | time after treatment(3 hrhours)rootdry air stream(15minutes) | ME00338r | 1007966668#1026 |
drought_6h_root | time after treatment(6 hrhours)rootdry air stream(15minutes) | ME00338r | 1007966668#1028 |
drought_12h_shoot | time after treatment(12 hrhours)shootdry air stream(15minutes) | ME00338s | 1007966668#1017 |
drought_15min_shoot | time after treatment(15 minminutes)shootdry air stream(15minutes) | ME00338s | 1007966668#1019 |
drought_1h_shoot | time after treatment(1 hrhours)shootdry air stream(15minutes) | ME00338s | 1007966668#1021 |
drought_24h_shoot | time after treatment(24 hrhours)shootdry air stream(15minutes) | ME00338s | 1007966668#1023 |
drought_30min_shoot | time after treatment(30 minminutes)shootdry air stream(15minutes) | ME00338s | 1007966668#1025 |
drought_3h_shoot | time after treatment(3 hrhours)shootdry air stream(15minutes) | ME00338s | 1007966668#1027 |
drought_6h_shoot | time after treatment(6 hrhours)shootdry air stream(15minutes) | ME00338s | 1007966668#1029 |
genotoxic_30min_root | bleomycin plus mitomycin(bleomycin 1.5ug/ml plus mitomycin C 22ug/ml, 30minutes)root | ME00326r | 1007966782#1087 |
genotoxic_1h_root | bleomycin plus mitomycin(bleomycin 1.5ug/ml plus mitomycin C 22ug/ml, 1hours)root | ME00326r | 1007966782#1089 |
genotoxic_3h_root | bleomycin plus mitomycin(bleomycin 1.5ug/ml plus mitomycin C 22ug/ml, 3hours)root | ME00326r | 1007966782#1091 |
genotoxic_6h_root | bleomycin plus mitomycin(bleomycin 1.5ug/ml plus mitomycin C 22ug/ml, 6hours)root | ME00326r | 1007966782#1093 |
genotoxic_12h_root | bleomycin plus mitomycin(bleomycin 1.5ug/ml plus mitomycin C 22ug/ml, 12hours)root | ME00326r | 1007966782#1095 |
genotoxic_24h_root | bleomycin plus mitomycin(bleomycin 1.5ug/ml plus mitomycin C 22ug/ml, 24hours)root | ME00326r | 1007966782#1097 |
genotoxic_30min_shoot | bleomycin plus mitomycin(bleomycin 1.5ug/ml plus mitomycin C 22ug/ml, 30minutes)shoot | ME00326s | 1007966782#1086 |
genotoxic_1h_shoot | bleomycin plus mitomycin(bleomycin 1.5ug/ml plus mitomycin C 22ug/ml, 1hours)shoot | ME00326s | 1007966782#1088 |
genotoxic_3h_shoot | bleomycin plus mitomycin(bleomycin 1.5ug/ml plus mitomycin C 22ug/ml, 3hours)shoot | ME00326s | 1007966782#1090 |
genotoxic_6h_shoot | bleomycin plus mitomycin(bleomycin 1.5ug/ml plus mitomycin C 22ug/ml, 6hours)shoot | ME00326s | 1007966782#1092 |
genotoxic_12h_shoot | bleomycin plus mitomycin(bleomycin 1.5ug/ml plus mitomycin C 22ug/ml, 12hours)shoot | ME00326s | 1007966782#1094 |
genotoxic_24h_shoot | bleomycin plus mitomycin(bleomycin 1.5ug/ml plus mitomycin C 22ug/ml, 24hours)shoot | ME00326s | 1007966782#1096 |
heat_12h_root | average daily temperature(25 C, 9hours)heat(38 C, 3hours)root | ME00339r | 1007967124#1239 |
heat_15min_root | heat(38 C, 15minutes)root | ME00339r | 1007967124#1242 |
heat_1h_root | heat(38 C, 1hours)root | ME00339r | 1007967124#1245 |
heat_24h_root | average daily temperature(25 C, 21hours)heat(38 C, 3hours)root | ME00339r | 1007967124#1247 |
heat_30min_root | heat(38 C, 30minutes)root | ME00339r | 1007967124#1250 |
heat_3h_root | heat(38 C, 3hours)root | ME00339r | 1007967124#1257 |
heat_4h_root | average daily temperature(25 C, 1hours)heat(38 C, 3hours)root | ME00339r | 1007967124#1259 |
heat_6h_root | average daily temperature(25 C, 3hours)heat(38 C, 3hours)root | ME00339r | 1007967124#1261 |
heat_12h_shoot | average daily temperature(25 C, 9hours)heat(38 C, 12hours)shoot | ME00339s | 1007967124#1240 |
heat_15min_shoot | heat(38 C, 15minutes)shoot | ME00339s | 1007967124#1243 |
heat_1h_shoot | heat(38 C, 1hours)shoot | ME00339s | 1007967124#1246 |
heat_24h_shoot | average daily temperature(25 C, 21hours)heat(38 C, 3hours)shoot | ME00339s | 1007967124#1248 |
heat_30min_shoot | heat(38 C, 30minutes)shoot | ME00339s | 1007967124#1251 |
heat_3h_shoot | heat(38 C, 3hours)shoot | ME00339s | 1007967124#1258 |
heat_4h_shoot | average daily temperature(25 C, 1hours)heat(38 C, 3hours)shoot | ME00339s | 1007967124#1260 |
heat_6h_shoot | average daily temperature(25 C, 3hours)heat(38 C, 3hours)shoot | ME00339s | 1007967124#1262 |
heat_15min_38C_cell_culture | heat(36 C, 15minutes)cell culture | ME00339c | 1007967124#1241 |
heat_1h_38C_cell_culture | heat(36C, 1hours)cell culture | ME00339c | 1007967124#1244 |
heat_30min_38C_cell_culture | heat(36 C, 30minutes)cell culture | ME00339c | 1007967124#1249 |
heat_3h_38C_1h_recover_cell_culture | average daily temperature(25 C, 1hours)heat(38 C, 3hours)cell culture | ME00339c | 1007967124#1252 |
heat_3h_38C_21h_recover_cell_culture | average daily temperature(25 C, 21hours)heat(38 C, 3hours)cell culture | ME00339c | 1007967124#1253 |
heat_3h_38C_3h_recover_cell_culture | average daily temperature(25 C, 3hours)heat(38 C, 3hours)cell culture | ME00339c | 1007967124#1254 |
heat_3h_38C_9h_recover_cell_culture | average daily temperature(25 C, 9hours)heat(38 C, 3hours)cell culture | ME00339c | 1007967124#1255 |
heat_3h_38C_cell_culture | heat(36 C, 3hours)cell culture | ME00339c | 1007967124#1256 |
osmotic_30min_root | mannitol(300 mM, 30minutes)root | ME00327r | 1007966835#1113 |
osmotic_1h_root | mannitol(300 mM, 1hours)root | ME00327r | 1007966835#1115 |
osmotic_3h_root | mannitol(300 mM, 3hours)root | ME00327r | 1007966835#1117 |
osmotic_6h_root | mannitol(300 mM, 6hours)root | ME00327r | 1007966835#1119 |
osmotic_12h_root | mannitol(300 mM, 12hours)root | ME00327r | 1007966835#1121 |
osmotic_24h_root | mannitol(300 mM, 24hours)root | ME00327r | 1007966835#1123 |
osmotic_30min_shoot | mannitol(300 mM, 30minutes)shoot | ME00327s | 1007966835#1112 |
osmotic_1h_shoot | mannitol(300 mM, 1hours)shoot | ME00327s | 1007966835#1114 |
osmotic_3h_shoot | mannitol(300 mM, 3hours)shoot | ME00327s | 1007966835#1116 |
osmotic_6h_shoot | mannitol(300 mM, 6hours)shoot | ME00327s | 1007966835#1118 |
osmotic_12h_shoot | mannitol(300 mM, 12hours)shoot | ME00327s | 1007966835#1120 |
osmotic_24h_shoot | mannitol(300 mM, 24hours)shoot | ME00327s | 1007966835#1122 |
oxidative_30min_root | methyl viologen(10 uM, 30minutes)root | ME00340r | 1007966941#1165 |
oxidative_1h_root | methyl viologen(10 uM, 1hours)root | ME00340r | 1007966941#1167 |
oxidative_3h_root | methyl viologen(10 uM, 3hours)root | ME00340r | 1007966941#1169 |
oxidative_6h_root | methyl viologen(10 uM, 6hours)root | ME00340r | 1007966941#1171 |
oxidative_12h_root | methyl viologen(10 uM, 12hours)root | ME00340r | 1007966941#1173 |
oxidative_24h_root | methyl viologen(10 uM, 24hours)root | ME00340r | 1007966941#1175 |
oxidative_30min_shoot | methyl viologen(10 uM, 30minutes)shoot | ME00340s | 1007966941#1164 |
oxidative_1h_shoot | methyl viologen(10 uM, 1hours)shoot | ME00340s | 1007966941#1166 |
oxidative_3h_shoot | methyl viologen(10 uM, 3hours)shoot | ME00340s | 1007966941#1168 |
oxidative_6h_shoot | methyl viologen(10 uM, 6hours)shoot | ME00340s | 1007966941#1170 |
oxidative_12h_shoot | methyl viologen(10 uM, 12hours)shoot | ME00340s | 1007966941#1172 |
oxidative_24h_shoot | methyl viologen(10 uM, 24hours)shoot | ME00340s | 1007966941#1174 |
salt_30min_root | NaCl(150 mM, 30minutes)root | ME00328r | 1007966888#1139 |
salt_1h_root | NaCl(150 mM, 1hours)root | ME00328r | 1007966888#1141 |
salt_3h_root | NaCl(150 mM, 3hours)root | ME00328r | 1007966888#1143 |
salt_6h_root | NaCl(150 mM, 6hours)root | ME00328r | 1007966888#1145 |
salt_12h_root | NaCl(150 mM, 12hours)root | ME00328r | 1007966888#1147 |
salt_24h_root | NaCl(150 mM, 24hours)root | ME00328r | 1007966888#1149 |
ME00328s | 1007966888#1148 | ||
UV-B_30min_root | time after treatment(30minutes)light wavelength(UV-B light, 30minutes)root | ME00329r | 1007966606#1003 |
UV-B_1h_root | time after treatment(1hours)light wavelength(UV-B light, 1hours)root | ME00329r | 1007966606#1005 |
UV-B_3h_root | time after treatment(3hours)light wavelength(UV-B light, 3hours)root | ME00329r | 1007966606#1007 |
UV-B_6h_root | time after treatment(6hours)light wavelength(UV-B light, 6hours)root | ME00329r | 1007966606#1009 |
UV-B_12h_root | time after treatment(12hours)light wavelength(UV-B light, 12hours)root | ME00329r | 1007966606#1011 |
UV-B_24h_root | time after treatment(24hours)light wavelength(UV-B light, 24hours)root | ME00329r | 1007966606#1013 |
UV-B_15min_root | time after treatment(15minutes)light wavelength(UV-B light, 15minutes)root | ME00329r | 1007966606#1015 |
UV-B_30min_shoot | time after treatment(30minutes)light wavelength(UV-B light, 30minutes)shoot | ME00329s | 1007966606#1002 |
UV-B_1h_shoot | time after treatment(1hours)light wavelength(UV-B light, 1hours)shoot | ME00329s | 1007966606#1004 |
UV-B_3h_shoot | time after treatment(3hours)light wavelength(UV-B light, 3hours)shoot | ME00329s | 1007966606#1006 |
UV-B_6h_shoot | time after treatment(6hours)light wavelength(UV-B light, 6hours)shoot | ME00329s | 1007966606#1008 |
UV-B_12h_shoot | time after treatment(12hours)light wavelength(UV-B light, 12hours)shoot | ME00329s | 1007966606#1010 |
UV-B_24h_shoot | time after treatment(24hours)light wavelength(UV-B light, 24hours)shoot | ME00329s | 1007966606#1012 |
UV-B_15min_shoot | time after treatment(15minutes)light wavelength(UV-B light, 15minutes)shoot | ME00329s | 1007966606#1014 |
wound_30min_root | time after treatment(30minutes)woundingroot | ME00330r | 1007966439#946 |
wound_1h_root | time after treatment(1hours)woundingroot | ME00330r | 1007966439#948 |
wound_3h_root | time after treatment(3hours)woundingroot | ME00330r | 1007966439#950 |
wound_6h_root | time after treatment(6hours)woundingroot | ME00330r | 1007966439#952 |
wound_12h_root | time after treatment(12hours)woundingroot | ME00330r | 1007966439#954 |
wound_24h_root | time after treatment(24hours)woundingroot | ME00330r | 1007966439#956 |
wound_15min_root | time after treatment(15minutes)woundingroot | ME00330r | 1007966439#958 |
wound_30min_shoot | time after treatment(30minutes)woundingshoot | ME00330s | 1007966439#945 |
wound_1h_shoot | time after treatment(1hours)woundingshoot | ME00330s | 1007966439#947 |
wound_3h_shoot | time after treatment(3hours)woundingshoot | ME00330s | 1007966439#949 |
wound_6h_shoot | time after treatment(6hours)woundingshoot | ME00330s | 1007966439#951 |
wound_12h_shoot | time after treatment(12hours)woundingshoot | ME00330s | 1007966439#953 |
wound_24h_shoot | time after treatment(24hours)woundingshoot | ME00330s | 1007966439#955 |
wound_15min_shoot | time after treatment(15minutes)woundingshoot | ME00330s | 1007966439#957 |
Col-0_DS | light regime(continuous darkness, 45minutes) | ME00345 | 1007966126#885 |
Col-0_FS | light wavelength(far-red light, 45minutes) | ME00345 | 1007966126#886 |
Col-0_PS | light regime(continuous darkness, 44minutes)light wavelength(red light, 1minutes) | ME00345 | 1007966126#887 |
Col-0_RS | light wavelength(red light, 45minutes) | ME00345 | 1007966126#888 |
Col-0_BS | light wavelength(blue light, 45minutes) | ME00345 | 1007966126#889 |
Col-0_AS | light regime(continuous darkness, 40minutes)light wavelength(UV-A light, 5minutes) | ME00345 | 1007966126#890 |
Col-0_US | light regime(continuous darkness, 40minutes)light wavelength(UV-A/B light, 5minutes) | ME00345 | 1007966126#891 |
Col-0_WS | light wavelength(white light, 45minutes) | ME00345 | 1007966126#892 |
Col-0_DL | light regime(continuous darkness, 4hours) | ME00345 | 1007966126#893 |
Col-0_FL | light wavelength(far-red light, 4hours) | ME00345 | 1007966126#894 |
Col-0_PL | light regime(continuous darkness, 4hours)light wavelength(red light, 1minutes) | ME00345 | 1007966126#895 |
Col-0_RL | light wavelength(red light, 4hours) | ME00345 | 1007966126#896 |
Col-0_BL | light wavelength(blue light, 4hours) | ME00345 | 1007966126#897 |
Col-0_AL | light regime(continuous darkness, 4hours)light wavelength(UV-A light, 5minutes) | ME00345 | 1007966126#898 |
Col-0_UL | light regime(continuous darkness, 4hours)light wavelength(UV-A/B light, 5minutes) | ME00345 | 1007966126#899 |
Col-0_WL | light wavelength(white light, 4hours) | ME00345 | 1007966126#900 |
RIKEN-Yamauchi Sample1 | average daily temperature(22 C, 96 hr) | ME00348 | 1007967219#1286 |
RIKEN-Yamauchi Sample2 | cold(4 C, 96 hr) | ME00348 | 1007967219#1287 |
Biotic Stress | |||
Slide header | Brief description | Experiment ID | TAIR experiment ID |
Ct18 | potato dextrose brothtime after treatment(18hours) | ME00341 | 1007967417#1306 |
Bc18 | Botrytis cinerea(5X10^5 spores/ml)time after treatment(18hours) | ME00341 | 1007967417#1307 |
Ct48 | potato dextrose brothtime after treatment(48hours) | ME00341 | 1007967417#1308 |
Bc48 | Botrytis cinerea(5X10^5 spores/ml)time after treatment(48hours) | ME00341 | 1007967417#1309 |
avr_4h | Pseudomonas syringae ES4326 avrRpt2time after treatment(4hours) | ME00353 | 1008031517#1351 |
avr_8h | Pseudomonas syringae ES4326 avrRpt2time after treatment(8hours) | ME00353 | 1008031517#1352 |
avr_16h | Pseudomonas syringae ES4326 avrRpt2time after treatment(16hours) | ME00353 | 1008031517#1353 |
avr_24h | Pseudomonas syringae ES4326 avrRpt2time after treatment(24hours) | ME00353 | 1008031517#1354 |
avr_48h | Pseudomonas syringae ES4326 avrRpt2time after treatment(48hours) | ME00353 | 1008031517#1355 |
vir_4h | Pseudomonas syringae ES4326time after treatment(4hours) | ME00353 | 1008031517#1356 |
vir_8h | Pseudomonas syringae ES4326time after treatment(8hours) | ME00353 | 1008031517#1357 |
vir_16h | Pseudomonas syringae ES4326time after treatment(16hours) | ME00353 | 1008031517#1358 |
vir_24h | Pseudomonas syringae ES4326time after treatment(24hours) | ME00353 | 1008031517#1359 |
vir_48h | Pseudomonas syringae ES4326time after treatment(48hours) | ME00353 | 1008031517#1360 |
Atgen-21_2h_DC3000 | Pseudomonas syringae pv. tomato DC3000(10e8 cfu/ml)time after treatment(2hours) | ME00331 | 1007966202#914 |
Atgen-22_6h_DC3000 | Pseudomonas syringae pv. tomato DC3000(10e8 cfu/ml)time after treatment(6hours) | ME00331 | 1007966202#915 |
Atgen-23_24h_DC3000 | Pseudomonas syringae pv. tomato DC3000(10e8 cfu/ml)time after treatment(24hours) | ME00331 | 1007966202#916 |
Atgen-24_2h_avrRpm1 | Pseudomonas syringae pv. tomato avrRpm1(10e8 cfu/ml)time after treatment(2hours) | ME00331 | 1007966202#917 |
Atgen-25_6h_avrRpm1 | Pseudomonas syringae pv. tomato avrRpm1(10e8 cfu/ml)time after treatment(6hours) | ME00331 | 1007966202#918 |
Atgen-26_24h_avrRpm1 | Pseudomonas syringae pv. tomato avrRpm1(10e8 cfu/ml)time after treatment(24hours) | ME00331 | 1007966202#919 |
Atgen-27_2h_HrcC | Pseudomonas syringae pv. tomato DC3000 hrcC-(10e8 cfu/ml)time after treatment(2hours) | ME00331 | 1007966202#920 |
Atgen-28_6h_HrcC | Pseudomonas syringae pv. tomato DC3000 hrcC-(10e8 cfu/ml)time after treatment(6hours) | ME00331 | 1007966202#921 |
Atgen-29_24h_HrcC | Pseudomonas syringae pv. tomato DC3000 hrcC-(10e8 cfu/ml)time after treatment(24hours) | ME00331 | 1007966202#922 |
Atgen-30_2h_Psph | Pseudomonas syringae pv. Phaseolicola(10e8 cfu/ml)time after treatment(2hours) | ME00331 | 1007966202#923 |
Atgen-31_6h_Psph | Pseudomonas syringae pv. Phaseolicola(10e8 cfu/ml)time after treatment(6hours) | ME00331 | 1007966202#924 |
Atgen-32_24h_Psph | Pseudomonas syringae pv. Phaseolicola(10e8 cfu/ml)time after treatment(24hours) | ME00331 | 1007966202#925 |
atgen x-1-1 H2O 1h | watertime after treatment(1hours) | ME00332 | 1008080727#1376 |
atgen x-1-4 H2O 4h | watertime after treatment(4hours) | ME00332 | 1008080727#1377 |
atgen x-2-1 Mg/Ca 1h | CaCl2 + MgCl2(1mM CaCl2 + 2.5 mM MgCl2)time after treatment(1hours) | ME00332 | 1008080727#1378 |
atgen x-2-4 Mg/Ca 4h | CaCl2 + MgCl2(1mM CaCl2 + 2.5 mM MgCl2)time after treatment(4hours) | ME00332 | 1008080727#1379 |
atgen x-3-1 GST 1h | GST(1 uM)time after treatment(1hours) | ME00332 | 1008080727#1380 |
atgen x-3-4 GST 4h | GST(1 uM)time after treatment(4hours) | ME00332 | 1008080727#1381 |
atgen x-4-1 HrpZ 1h | hairpin Z(10 uM)time after treatment(1hours) | ME00332 | 1008080727#1382 |
atgen x-4-4 HrpZ 4h | hairpin Z(10 uM)time after treatment(4hours) | ME00332 | 1008080727#1383 |
atgen x-5-1 GST-NPP1 1h | GST-Necrosis-inducing Phytophthora Protein 1(1 uM)time after treatment(1hours) | ME00332 | 1008080727#1384 |
atgen x-5-4 GST-NPP1 4h | GST-Necrosis-inducing Phytophthora Protein 1(1 uM)time after treatment(4hours) | ME00332 | 1008080727#1385 |
atgen x-6-1 Flg22 1h | flagellin(1 uM)time after treatment(1hours) | ME00332 | 1008080727#1386 |
atgen x-6-4 Flg22 4h | flagellin(1 uM)time after treatment(4hours) | ME00332 | 1008080727#1387 |
atgen x-7-1 LPS 1h | lipopolysaccaride(1 uM)time after treatment(1hours) | ME00332 | 1008080727#1388 |
atgen x-7-4 LPS 4h | lipopolysaccaride(1 uM)time after treatment(4hours) | ME00332 | 1008080727#1389 |
atgenx-C-6 | watertime after treatment(6hours) | ME00342 | 1007966021#849 |
atgenx-C-12 | watertime after treatment(12hours) | ME00342 | 1007966021#850 |
atgenx-C-24 | watertime after treatment(24hours) | ME00342 | 1007966021#851 |
atgenx-Pi-6 | Phytophthora infestans(10^6 spores/ml)time after treatment(6hours) | ME00342 | 1007966021#852 |
atgenx-Pi-12 | Phytophthora infestans(10^6 spores/ml)time after treatment(12hours) | ME00342 | 1007966021#853 |
atgenx-Pi-24 | Phytophthora infestans(10^6 spores/ml)time after treatment(12hours) | ME00342 | 1007966021#854 |
col wt 06h infected | Erysiphe orontiitime after treatment(6hours) | ME00354 | 1008031468#1330 |
col wt 12h infected | Erysiphe orontiitime after treatment(12hours) | ME00354 | 1008031468#1332 |
col wt 18h infected | Erysiphe orontiitime after treatment(18hours) | ME00354 | 1008031468#1334 |
col wt 24h infected | Erysiphe orontiitime after treatment(24hours) | ME00354 | 1008031468#1336 |
col wt 02d infected | Erysiphe orontiitime after treatment(2days) | ME00354 | 1008031468#1338 |
col wt 03d infected | Erysiphe orontiitime after treatment(3days) | ME00354 | 1008031468#1340 |
col wt 04d infected | Erysiphe orontiitime after treatment(4days) | ME00354 | 1008031468#1342 |
col wt 05d infected | Erysiphe orontiitime after treatment(5days) | ME00354 | 1008031468#1344 |
Chemical Treatment | |||
Slide header | Brief description | Experiment ID | TAIR experiment ID |
RIKEN-Goda Sample3 | propiconazole(10 uM, 3hours) | ME00357 | 1008080692#1363 |
RIKEN-Goda Sample4 | propiconazole(10 uM, 12hours) | ME00357 | 1008080692#1364 |
RIKEN-Goda Sample5 | uniconazole(10 uM, 3hours) | ME00357 | 1008080692#1365 |
RIKEN-Goda Sample6 | uniconazole(10 uM, 12hours) | ME00357 | 1008080692#1366 |
RIKEN-Goda Sample11 | paclobutrazol(10 uM, 3hours) | ME00357 | 1008080692#1367 |
RIKEN-Goda Sample12 | paclobutrazol(10 uM, 12hours) | ME00357 | 1008080692#1368 |
RIKEN-Goda Sample13 | prohexadione(10 uM, 3hours) | ME00357 | 1008080692#1369 |
RIKEN-Goda Sample14 | prohexadione(10 uM, 12hours) | ME00357 | 1008080692#1370 |
RIKEN-Goda Sample23 | 2,4,6-trihydroxybenzamide(10 uM, 3hours) | ME00358 | 1008080715#1372 |
RIKEN-Goda Sample24 | p-chlorophenoxyisobutyric acid(10 uM, 3hours) | ME00358 | 1008080715#1373 |
RIKEN-Goda Sample25 | 2,3,5-triiodobenzoic acid(10 uM, 3hours) | ME00358 | 1008080715#1374 |
RIKEN-Goda Sample26 | naphthylphthalamic acid(10 uM, 3hours) | ME00358 | 1008080715#1375 |
RIKEN-Goda Sample7 | brassinazole 220(10 uM, 3hours) | ME00359 | 1008205330#1413 |
RIKEN-Goda Sample8 | brassinazole 220(10 uM, 12hours) | ME00359 | 1008205330#1414 |
RIKEN-Goda Sample10 | brassinazole 91(10 uM, 12hours) | ME00359 | 1008205330#1415 |
RIKEN-Goda Sample30 | brassinazole 220(3 uM, 3hours) | ME00359 | 1008205330#1417 |
RIKEN-Goda Sample19 | AgNO3(10 uM, 3hours) | ME00360 | 1008080786#1397 |
RIKEN-Goda Sample20 | aminoethoxyvinylglycine(10 uM, 3hours) | ME00360 | 1008080786#1398 |
RIKEN-Goda Sample27 | cycloheximide(10 uM, 3hours) | ME00361 | 1008080804#1400 |
RIKEN-Goda Sample22 | MG132(10 uM, 3hours) | ME00362 | 1008080822#1408 |
RIKEN-Goda Sample15 | PNO8(1 uM, 3hours) | ME00363 | 1008080809#1403 |
RIKEN-Goda Sample16 | PNO8(1 uM, 12hours) | ME00363 | 1008080809#1404 |
RIKEN-Goda Sample29 | PNO8(10 uM, 3hours) | ME00363 | 1008080809#1406 |
RIKEN-Goda Sample17 | ibuprofen(10 uM, 3hours) | ME00364 | 1008080827#1410 |
RIKEN-Goda Sample18 | daminozide(10 uM, 3hours) | ME00364 | 1008080827#1411 |
RIKEN-Goda Sample21 | salicylic acid(10 uM, 3hours) | ME00364 | 1008080827#1412 |
Hormone Treatment | |||
Slide header | Brief description | Experiment ID | TAIR experiment ID |
RIKEN-Goda Sample19 | zeatin(1 uM, 3hours) | ME00344 | 1007966040#857 |
RIKEN-Goda Sample14 | Methyl Jasmonate(10 uM, 1hours) | ME00337 | 1007965964#843 |
RIKEN-Goda Sample6 | Methyl Jasmonate(10 uM, 30minutes) | ME00337 | 1007965964#844 |
RIKEN-Goda Sample22 | Methyl Jasmonate(10 uM, 3hours) | ME00337 | 1007965964#845 |
RIKEN-Goda Sample10 | IAA(1 uM, 1hours) | ME00336 | 1007965859#821 |
RIKEN-Goda Sample2 | IAA(1 uM, 30minutes) | ME00336 | 1007965859#822 |
RIKEN-Goda Sample18 | IAA(1 uM, 3hours) | ME00336 | 1007965859#823 |
RIKEN-Goda Sample13 | ABA(10 uM, 1hours) | ME00333 | 1007964750#594 |
RIKEN-Goda Sample5 | ABA(10 uM, 30minutes) | ME00333 | 1007964750#595 |
RIKEN-Goda Sample21 | ABA(10 uM, 3hours) | ME00333 | 1007964750#596 |
RIKEN-Goda_Sample12 | Col-0GA3(1 uM, 1hours) | ME00343w | 1007966175#902 |
RIKEN-Goda_Sample20 | Col-0GA3(1 uM, 3hours) | ME00343w | 1007966175#904 |
RIKEN-Goda_Sample26 | ga1-5GA3(1 uM, 30minutes) | ME00343m | 1007966175#906 |
RIKEN-Goda_Sample28 | ga1-5GA3(1 uM, 1hours) | ME00343m | 1007966175#908 |
RIKEN-Goda_Sample30 | ga1-5GA3(1 uM, 3hours) | ME00343m | 1007966175#910 |
RIKEN-Goda_Sample4 | Col-0GA3(1 uM, 30minutes) | ME00343w | 1007966175#911 |
RIKEN-Goda Sample9 | 6-deoxotyphasterol(1 uM, 3hours) | ME00343w | 1007999438#1318 |
RIKEN-Goda Sample16 | Col-0Brassinolide(10 nM, 1hours) | ME00335w | 1007966053#861 |
RIKEN-Goda Sample34 | det2-1Brassinolide(10 nM, 1hours) | ME00335m | 1007966053#862 |
RIKEN-Goda Sample32 | det2-1Brassinolide(10 nM, 30minutes) | ME00335m | 1007966053#863 |
RIKEN-Goda Sample8 | Col-0Brassinolide(10 nM, 30minutes) | ME00335w | 1007966053#864 |
RIKEN-Goda Sample24 | Col-0Brassinolide(10 nM, 3hours) | ME00335w | 1007966053#865 |
RIKEN-Goda Sample36 | det2-1Brassinolide(10 nM, 3hours) | ME00335m | 1007966053#866 |
RIKEN-Goda Sample2 | campestanol(10 uM, 3hours) | ME00352 | 1007999438#1311 |
RIKEN-Goda Sample3 | 6-deoxocathasterone(1 uM, 3hours) | ME00352 | 1007999438#1312 |
RIKEN-Goda Sample4 | cathasterone(1 uM, 3hours) | ME00352 | 1007999438#1313 |
RIKEN-Goda Sample5 | 6-deoxoteasterone(1 uM, 3hours) | ME00352 | 1007999438#1314 |
RIKEN-Goda Sample6 | teasterone(1 uM, 3hours) | ME00352 | 1007999438#1315 |
RIKEN-Goda Sample7 | 3-dehydro-6-deoxoteasterone(1 uM, 3hours) | ME00352 | 1007999438#1316 |
RIKEN-Goda Sample8 | 3-dehydroteasterone(1 uM, 3hours) | ME00352 | 1007999438#1317 |
RIKEN-Goda Sample10 | typhasterol(1 uM, 3hours) | ME00352 | 1007999438#1319 |
RIKEN-Goda Sample11 | 6-deoxocastasterone(1 uM, 3hours) | ME00352 | 1007999438#1320 |
RIKEN-Goda Sample12 | castasterone(100 nM, 3hours) | ME00352 | 1007999438#1321 |
RIKEN-Goda Sample13 | brassinolide(1 uM, 3hours) | ME00352 | 1007999438#1322 |
RIKEN-Goda Sample9 | brassinazole 91(10 uM, 3hours) | ME00352 | 1008205330#1416 |
Kiba Sample2 | Col-0t-zeatin(20 uM, 3hours) | ME00356 | 1008031453#1326 |
Kiba Sample4 | ARR22-oxt-zeatin(20 uM, 3hours) | ME00356 | 1008031453#1328 |
RIKEN-Nakabayashi_Sample1 | - | ME00351 | 1007967394#1298 |
RIKEN-Nakabayashi_Sample2 | water(48hours) | ME00351 | 1007967394#1299 |
RIKEN-Nakabayashi_Sample3 | ABA(3 uM, 24hours) | ME00351 | 1007967394#1300 |
RIKEN-Nakabayashi_Sample4 | ABA(30 uM, 24hours) | ME00351 | 1007967394#1301 |
RIKEN-Li Sample1 | water(3hours) | ME00350 | 1007967381#1292 |
RIKEN-Li Sample2 | water(6hours) | ME00350 | 1007967381#1293 |
RIKEN-Li Sample3 | water(9hours) | ME00350 | 1007967381#1294 |
RIKEN-Li Sample4 | gibberellin(5 uM, 3hours) | ME00350 | 1007967381#1295 |
RIKEN-Li Sample5 | gibberellin(5 uM, 6hours) | ME00350 | 1007967381#1296 |
RIKEN-Li Sample6 | gibberellin(5 uM, 9hours) | ME00350 | 1007967381#1297 |
Deveopment | |||
Slide header | Brief description | Experiment ID | TAIR experiment ID |
Col-0_cotyl | Col-0age(7 days)cotyledon | ME00319 | 1006710873#430 |
Col-0_hyp | Col-0age(7 days)hypocotyl | ME00319 | 1006710873#431 |
Col-0_root7 | Col-0age(7 days)root | ME00319 | 1006710873#432 |
Col-0_veg_leaf | Col-0age(7 days)leafshoot apex | ME00319 | 1006710873#433 |
Col-0_leaf_1-2 | Col-0age(7 days)leaf | ME00319 | 1006710873#434 |
Col-0_shoot_veg | Col-0age(7 days)shootshoot apex | ME00319 | 1006710873#435 |
Col-0_seedl_green | Col-0age(7 days)shoot | ME00319 | 1006710873#436 |
Col-0_shoot_trans | Col-0age(14 days)inflorescenceshoot | ME00319 | 1006710873#437 |
Col-0_root17 | Col-0age(17 days)root | ME00319 | 1006710873#438 |
Col-0_roset4_1l | Col-0age(10 days)young leaf | ME00319 | 1006710873#439 |
gl1T_roset4_1l | SALK_039478age(10 days)young leaf | ME00319 | 1006710873#440 |
Col-0_roset2 | Col-0age(17 days)mature leaf | ME00319 | 1006710873#441 |
Col-0_roset4 | Col-0age(17 days)mature leaf | ME00319 | 1006710873#442 |
Col-0_roset6 | Col-0age(17 days)mature leaf | ME00319 | 1006710873#443 |
Col-0_roset8 | Col-0age(17 days)young leaf | ME00319 | 1006710873#444 |
Col-0_roset10 | Col-0age(17 days)young leaf | ME00319 | 1006710873#445 |
Col-0_roset12 | Col-0age(17 days)young leaf | ME00319 | 1006710873#446 |
gl1T_rosett12 | SALK_039478age(17 days)young leaf | ME00319 | 1006710873#447 |
Col-0_lf7_petio | Col-0age(17 days)petiole | ME00319 | 1006710873#448 |
Col-0_lf7_prox | Col-0age(17 days)young leaf | ME00319 | 1006710873#449 |
Col-0_lf7_distal | Col-0age(17 days)young leaf | ME00319 | 1006710873#450 |
Col-0_whole21d | Col-0age(21 days)whole plant | ME00319 | 1006710873#451 |
Col-0_whole22d | Col-0age(22 days)whole plant | ME00319 | 1006710873#452 |
Col-0_whole23d | Col-0age(23 days)whole plant | ME00319 | 1006710873#453 |
Col-0_senescent | Col-0age(35 days)senescence leaf | ME00319 | 1006710873#454 |
Col-0_cauline | Col-0age(21+ days)cauline leaf | ME00319 | 1006710873#455 |
Col-0_stem_2nd | Col-0age(21+ days)internodeshoot | ME00319 | 1006710873#456 |
Col-0_stem_1st | Col-0age(21+ days)nodeshoot | ME00319 | 1006710873#457 |
Col-0_inflo | Col-0age(21 days)inflorescencestage 1-6 flower | ME00319 | 1006710873#458 |
Col-0_flow9 | Col-0age(21+ days)stage 9 flower | ME00319 | 1006710873#459 |
Col-0_flow10/11 | Col-0age(21+ days)stage 10-11 flower | ME00319 | 1006710873#460 |
Col-0_flow12 | Col-0age(21+ days)stage 12 flower | ME00319 | 1006710873#461 |
Col-0_flow12_sepal | Col-0age(21+ days)sepal | ME00319 | 1006710873#462 |
Col-0_flow12_petal | Col-0age(21+ days)petal | ME00319 | 1006710873#463 |
Col-0_flow12_stam | Col-0age(21+ days)stamen | ME00319 | 1006710873#464 |
Col-0_flow12_carp | Col-0age(21+ days)carpel | ME00319 | 1006710873#465 |
Col-0_flow15 | Col-0age(21+ days)stage 15 flower | ME00319 | 1006710873#466 |
Col-0_flow15_pedi | Col-0age(21+ days)pedicelstage 15 flower | ME00319 | 1006710873#467 |
Col-0_flow15_sepal | Col-0age(21+ days)sepalstage 15 flower | ME00319 | 1006710873#468 |
Col-0_flow15_petal | Col-0age(21+ days)petalstage 15 flower | ME00319 | 1006710873#469 |
Col-0_flow15_stam | Col-0age(21+ days)stage 15 flowerstamen | ME00319 | 1006710873#470 |
Col-0_flow15_carp | Col-0age(21+ days)carpelstage 15 flower | ME00319 | 1006710873#471 |
clv3-7_inflor | clv3-7age(21+ days)stage 1-6 flower | ME00319 | 1006710873#472 |
lfy-12_inflor | lfy-12age(21+ days)stage 1-7 flower | ME00319 | 1006710873#473 |
ap1-15_inflor | ap1-15age(21+ days)stage 1-8 flower | ME00319 | 1006710873#474 |
ap2-6_inflor | ap2-6age(21+ days)stage 1-9 flower | ME00319 | 1006710873#475 |
ap3-6_inflor | ap3-6age(21+ days)stage 1-10 flower | ME00319 | 1006710873#476 |
ag-12_inflor | SALK_014999age(21+ days)stage 1-11 flower | ME00319 | 1006710873#477 |
ufo-1_inflor | ufo-1age(21+ days)stage 1-12 flower | ME00319 | 1006710873#478 |
clv3-7_flow12 | clv3-7age(21+ days)stage 12 flower | ME00319 | 1006710873#479 |
lfy-12_flow12 | lfy-12age(21+ days)stage 12 flower | ME00319 | 1006710873#480 |
ap1-15_flow12 | ap1-15age(21+ days)stage 12 flower | ME00319 | 1006710873#481 |
ap2-6_flow12 | ap2-6age(21+ days)stage 12 flower | ME00319 | 1006710873#482 |
ap3-6_flow12 | ap3-6age(21+ days)stage 12 flower | ME00319 | 1006710873#483 |
ag-12_flow12 | SALK_014999age(21+ days)stage 12 flower | ME00319 | 1006710873#484 |
ufo-1_flow12 | ufo-1age(21+ days)stage 12 flower | ME00319 | 1006710873#485 |
Col-0_pollen | Col-0age(6 weeks)pollen | ME00319 | 1006710873#486 |
Col-0_sil3 | Col-0age(8 weeks)globular embryo | ME00319 | 1006710873#487 |
Col-0_sil4 | Col-0age(8 weeks)heart embryo | ME00319 | 1006710873#488 |
Col-0_sil5 | Col-0age(8 weeks)triangle embryo | ME00319 | 1006710873#489 |
Col-0_seed6 | Col-0age(8 weeks)torpedo embryo | ME00319 | 1006710873#490 |
Col-0_seed7 | Col-0age(8 weeks)walking-stick seed | ME00319 | 1006710873#491 |
Col-0_seed8 | Col-0age(8 weeks)early curled cotyledon | ME00319 | 1006710873#492 |
Col-0_seed9 | Col-0age(8 weeks)early green cotyledon | ME00319 | 1006710873#493 |
Col-0_seed10 | Col-0age(8 weeks)green cotyledon | ME00319 | 1006710873#494 |
Col-0_roset7 | Col-0age(7 days)early rosette | ME00319 | 1006710873#495 |
Col-0_roset14 | Col-0age(14 days)mid rosette | ME00319 | 1006710873#496 |
Col-0_roset21 | Col-0age(21 days)late rosette | ME00319 | 1006710873#497 |
Col-0_leaf | Col-0age(15 days)expanding leaf | ME00319 | 1006710873#498 |
Col-0_flower | Col-0age(4 weeks)stage 12 flower | ME00319 | 1006710873#499 |
Col-0_root_MS1 | Col-0age(15 days)root | ME00319 | 1006710873#500 |
Col-0_root_GM-8 | Col-0age(8 days)root | ME00319 | 1006710873#501 |
Col-0_root_GM5-8 | Col-0age(8 days)root | ME00319 | 1006710873#502 |
Col-0_seedl_GM | Col-0age(8 days)seedlingshoot | ME00319 | 1006710873#503 |
Col-0_seedl_GM5 | Col-0age(8 days)seedlingshoot | ME00319 | 1006710873#504 |
Col-0_root_GM-21 | Col-0age(21 days)root | ME00319 | 1006710873#505 |
Col-0_root_GM5-21 | Col-0age(21 days)root | ME00319 | 1006710873#506 |
Col-0_sedlGM-21 | Col-0age(21 days)seedlingshoot | ME00319 | 1006710873#507 |
Col-0_sedlGM5-21 | Col-0age(21 days)seedlingshoot | ME00319 | 1006710873#508 |
ABA signaling Related Classes | ||
Class | Description | Reference/Source |
Time_IL | Time course expression group (late upregulation) | |
Time_IRC | Time course expression group (rapid and constant upregulation) | |
Time_IRT | Time course expression group (rapid and transient upregulation) | |
Tissue_IMG | Genes upregulated in both mesophyll and gaurd cell | Leonhardt et al (2004) |
Tissue_IMO | Genes upregulated in mesophyll but not in gaurd cell | |
Tissue_IGO | Genes upregulated in gaurd cell but not in mesophyll | |
Tissue_RGO | Genes downregulated in gaurd cell but not in mesophyll | |
Tissue_RMO | Genes downregulated in mesophyll but not in gaurd cell | |
Suzuki_Group_1 | ABA_dependent_Activated_VP1_enhanced | Suzuki et al (2003) |
Suzuki_Group_2 | ABA_dependent_Activated_VP1_suppressed | |
Suzuki_Group_3 | ABA_dependent_repressed_VP1_enhanced | |
Suzuki_Group_4 | ABA_dependent_repressed_VP1_suppressed | |
Suzuki_Group_5 | ABA_regulated_Activated | |
Suzuki_Group_6 | ABA_regulated_Repressed | |
Suzuki_Group_7 | VP1_AND_ABA_dependent_Repressed | |
Suzuki_Group_8 | VP1_AND_ABA_dependent_activated | |
Suzuki_Group_9 | VP1_activated_ABA_activated | |
Suzuki_Group_10 | VP1_activated_ABA_repressed | |
Suzuki_Group_11 | VP1_dependent_Activated_ABA_enhanced | |
Suzuki_Group_12 | VP1_dependent_Activated_ABA_suppressed | |
Suzuki_Group_13 | VP1_dependent_Repressed_ABA_enhanced | |
Suzuki_Group_14 | VP1_dependent_Repressed_ABA_suppressed | |
Suzuki_Group_15 | VP1_regulated_Activated | |
Suzuki_Group_16 | VP1_regulated_Repressed | |
Suzuki_Group_17 | VP1_repressed_ABA_activated | |
Suzuki_Group_18 | VP1_repressed_ABA_repressed | |
Xin1 | Genes induced by ABA in wild-type (Ws) but not in rop10-1 | Xin et al (2005) |
Xin2 | Genes induced by ABA in rop10-1but not in wild-type (Ws) | |
Xin3 | Genes with higher expression in ABA-treated rop10-1 than in ABA-treated Ws | |
R1 | Repressed in 1 experiments | Classes derived from comparison of ABA medaited gene induction and repression in different experiemnts |
R2 | Repressed in 2 experiments | |
R3 | Repressed in 3 experiments | |
I1 | Induced in 1 experiments | |
I2 | Induced in 2 experiments | |
I3 | Induced in 3 experiments | |
I4 | Induced in 4 experiments | |
I5 | Induced in 5 experiments | |
IR | Genes induced and repressed by ABA |