cluster # 10945

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Oryza sativa
cluster # 10945 cluster # 10945 Sequences # 8 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10945#0 length = 1080 sequences # 5
consensus_10945#1 length = 445 sequences # 1

consensus_10945#2 length = 230 sequences # 1
consensus_10945#3 length = 182 sequences # 1

consensusID : consensus_10945#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1080
fasta sequence

                              [CCCTTCGTTTCCCACCCACCACCTCTCTCCGGCGTGCTCGCTCGCACACAGTCCCCAATGGCCTCCCGGAACGCCGACCCGCCGCGTCACCACCCCTCGACGCCGCCTCTCCTCCTCGCCATGCGCCACCTCCCCTTCCCGGGCGTCCACCGGCCGCGCGCGCTCCCCGCCCCGGACCTCGCGCCCCTCGCCGCCCGCCTCGAAGAGCTCGCTGCCGCCGCGGCCGCGCACCCGCTCCTGAAGCCGCTCTTCGCCTTCCACTCCCACCTCGCCGCCTTCTCCCAGAGCAGGAGGCGGGCGATGGCGACGATGCGCCGGCGGCGGACGACGGGCGAGTGCCCGCTGTCCGGCGAGCACTGCTTCGCGGCGGTGCTGGGTGACTCCGTGGCCGGTGTG-GTGGTGTCCAGCGGCATCAACAACTTCCTCAGC-CTGTACAACACCGTCCTCGTCGTCAGGC---TCGTGCTCACCTGGTTCCCCAACACGCCGCCCGCCATCGTCGCGCCCCTCAGCACGATATGTGATC-CGTATCTGAACATTTTCCGGGGAATCATCCCGCCGCTGGGGGGAACGCTCGACCTGTCGCCCATCCTCGCGTTCCTGGTCCTCAACGCCTTGTCCAGCACCGCCGCCGCGCTCCCGGCCGAGCTCCCGGACCCAGCACCGCCGACGTCTCGCGGCGCAACCTCGTCAAGCTCCGTGCTCACCGCAAACCGGAGGAAATGGATGCGGAGAATCCGCCCGGTAAAATCGCAGGAAGGAGAGGAGGAAATGTGATGCTCTATCTAGGTGGGACTTCGTTTGAACCAGTTTGGACAGATGGAATCGCTGTCTCACTGACATGGTGGCCATCAGACTAAGAGTCTGGGCATGTTCAGACGCGAACGATCATCAATTAAGCAGGCGGAATTGTTTTGGTTGTGTTGCTTCAGAAGATTTTTGCTTGTACGCTGTAGAATCCATCCCATTGAGGCTTCGTGTTTTCTGCATGTATGCAGAGGAACAACCTGCTTGACTAGTTTGACATGTTCCAGTCTTTTGGATGAGTTTGTTACTTTGTTGATGAATCGCATGCTCACTGTT]

[+] EMBL AK106024             [CCCTTCGTTTCCCACCCACCACCTCTCTCCGGCGTGCTCGCTCGCACACAGTCCCCAATGGCCTCCCGGAACGCCGACCCGCCGCGTCACCACCCCTCGACGCCGCCTCTCCTCCTCGCCATGCGCCACCTCCCCTTCCCGGGCGTCCACCGGCCGCGCGCGCTCCCCGCCCCGGACCTCGCGCCCCTCGCCGCCCGCCTCGAAGAGCTCGCTGCCGCCGCGGCCGCGCACCCGCTCCTGAAGCCGCTCTTCGCCTTCCACTCCCACCTCGCCGCCTTCTCCCAGAGCAGGAGGCGGGCGATGGCGACGATGCGCCGGCGGCGGACGACGGGCGAGTGCCCGCTGTCCGGCGAGCACTGCTTCGCGGCGGTGCTGGGTGACTCCGTGGCCGGTGTG GTGGTGTCCAGCGGCATCAACAACTTCCTCAGC CTGTACAACACCGTCCTCGTCGTCAGGC   TCGTGCTCACCTGGTTCCCCAACACGCCGCCCGCCATCGTCGCGCCCCTCAGCACGATATGTGATC CGTATCTGAACATTTTCCGGGGAATCATCCCGCCGCTGGGGGGAACGCTCGACCTGTCGCCCATCCTCGCGTTCCTGGTCCTCAACGCCTTGTCCAGCACCGCCGCCGCGCTCCCGGCCGAGCTCCCGGACCCAGCACCGCCGACGTCTCGCGGCGCAACCTCGTCAAGCTCCGTGCTCACCGCAAACCGGAGGAAATGGATGCGGAGAATCCGCCCGGTAAAATCGCAGGAAGGAGAGGAGGAAATGTGATGCTCTATCTAGGTGGGACTTCGTTTGAACCAGTTTGGACAGATGGAATCGCTGTCTCACTGACATGGTGGCCATCAGACTAAGAGTCTGGGCATGTTCAGACGCGAACGATCATCAATTAAGCAGGCGGAATTGTTTTGGTTGTGTTGCTTCAGAAGATTTTTGCTTGTACGCTGTAGAATCCATCCCATTGAGGCTTCGTGTTTTCTGCATGTATGCAGAGGAACAACCTGCTTGACTAGTTTGACATGTTCCAGTCTTTTGGATGAGTTTGTTAC                            ]
[+] EMBL AK060013             [                               GCGTGCTCACTCGCACACAGTCCCCAATGGCCTCCCGGAACGCCGACCCGCCGCGTCACCACCCCTCGACGCCGCCTCTCCTCCTCGCCATGCGCCACCTCCCCTTCCCGGGCGTCCACCGGCCGCGCGCGCTCCCCGCCCCGGACCTCGCGCCCCTCGCCGCCCGCCTCGAAGAGCTCGCTGCCGCCGCGGCCGCGCACCCGCTCCTGAAGCCGCTCTTCGCCTTCCACTCCCACCTCGCCGCCTTCTCCCAGAGCAGGAGGCGGGCGATGGCGACGATGCGCCGGCGGCGGACGACGGGCGAGTGCCCGCTGTCCGGCGAGCACTGCTTCGCGGCGGTGCTGGGTGACTCCGTGGCCGGTGTG GTGGTGTCCAGCGGCATCAACAACTTCCTCAGC CTGTACAACACCGTCCTCGTCGTCAGGC   TCGTGCTCACCTGGTTCCCCAACACGCCGCCCGCCATCGTCGCGCCCCTCAGCACGATATGTGATC CGTATCTGAACATTTTCCGGGGAATCATCCCGCCGCTGGGGGGAACGCTCGACCTGTCGCCCATCCTCGCGTTCCTGGTCCTCAACGCCTTGTCCAGCACCGCCGCCGCGCTCCCGGCCGAGCTCCCGGACCCAGCACCGCCGACGTCTCGCGGCGCAACCTCGTCAAGCTCCGTGCTCACCGCAAACCGGAGGAAATGGATGCGGAGAATCCGCCCGGTAAAATCGCAGGAAGGAGAGGAGGAAATGTGATGCTCTATCTAGGTGGGACTTCGTTTGAACCAGTTTGGACAGATGGAATCGCTGTCTCACTGACATGGTGGCCATCAGACTAAGAGTCTGGGCATGTTCAGACGCGAACGATCATCAATTAAGCAGGCGGAATTGTTTTGGTTGTGTTGCTTCAGAAGATTTTTGCTTGTACGCTGTAGAATCCATCCCATTGAGGCTTCGTGTTTTCTGCATGTATGCAGAGGAACAACCTGCTTGA                                                                    ]
[+] EMBL AK106221             [                                          CGCACACAGTCCCCAATGGCCTCCCGGAACGCCGACCCGCCGCGTCACCACCCCTCGACGCCGCCTCTCCTCCTCGCCATGCGCCACCTCCCCTTCCCGGGCGTCCACCGGCCGCGCGCGCTCCCCGCCCCGGACCTCGCGCCCCTCGCCGCCCGCCTCGAAGAGCTCGCTGCCGCCGCGGCCGCGCACCCGCTCCTGAAGCCGCTCTTCGCCTTCCACTCCCACCTCGCCGCCTTCTCCCAGAGCAGGAGGCGGGCGATGGCGACGATGCGCCGGCGGCGGACGACGGGCGAGTGCCCGCTGTCCGGCGAGCACTGCTTCGCGGCGGTGCTGGGTGACTCCGTGGCCGGTGTG GTGGTGTCCAGCGGCATCAACAACTTCCTCAGC CTGTACAACACCGTCCTCGTCGTCAGGC   TCGTGCTCACCTGGTTCCCCAACACGCCGCCCGCCATCGTCGCGCCCCTCAGCACGATATGTGATC CGTATCTGAACATTTTCCGGGGAATCATCCCGCCGCTGGGGGGAACGCTCGACCTGTCGCCCATCCTCGCGTTCCTGGTCCTCAACGCCTTGTCCAGCACCGCCGCCGCGCTCCCGGCCGAGCTCCCGGACCCAGCACCGCCGACGTCTCGCGGCGCAACCTCGTCAAGCTCCGTGCTCACCGCAAACCGGAGGAAATGGATGCGGAGAATCCGCCCGGTAAAATCGCAGGAAGGAGAGGAGGAAATGTGATGCTCTATCTAGGTGGGACTTCGTTTGAACCAGTTTGGACAGATGGAATCGCTGTCTCACTGACATGGTGGCCATCAGACTAAGAGTCTGGGCATGTTCAGACGCGAACGATCATCAATTAAGCAGGCGGAATTGTTTTGGTTGTGTTGCTTCAGAAGATTTTTGCTTGTACGCTGTAGAATCCATCCCATTGAGGCTTCGTGTTTTCTGCATGTATGCAGAGGAACAACCTGCTTGACTAGTTTGACATGTTCCAGTCTTTTGGATGAGTTTGTTACTTTGTTGATGAATCGCATGCTCACTGTT]
[+] EMBL AK071755             [                                           GCACACAGTCCCCAATGGCCTCCCGGAACGCCGACCCGCCGCGTCACCACCCCTCGACGCCGCCTCTCCTCCTCGCCATGCGCCACCTCCCATTCCCGGGCGTCCACCGGCCGCGCGCGCTCCCCGCCCCGGACCTCGCGCCCCTCGCCGCCCGCCTCGAAGAGCTCGCTGCCGCCGCGGCCGCGCACCCGCTCCTGAAGCCGCTCTTCGCCTTCCACTCCCACCTCGCCGCCTTCTCCCAGAGCAGGAGGCGGGCGATGGCGACGATGCGCCGGCGGCGGACGACGGGCGAGTGCCCGCTGTCCGGCGAGCACTGCTTCGCGGCGGTGCTGGGTGACTCCGTGGCCGGTGTG GTGGTGTCCAGCGGCATCAACAACTTCCTCAGC CTGTACAACACCGTCCTCGTCGTCAGGC   TCGTGCTCACCTGGTTCCCCAACACGCCGCCCGCCATCGTCGCGCCCCTCAGCACGATATGTGATC CGTATCTGAACATTTTCCGGGGAATCATCCCGCCGCTGGGGGGAACGCTCGACCTGTCGCCCATCCTCGCGTTCCTGGTCCTCAACGCCTTGTCCAGCACCGCCGCCGCGCTCCCGGCCGAGCTCCCGGACCCAGCACCGCCGACGTCTCGCGGCGCAACCTCGTCAAGCTCCGTGCTCACCGCAAACCGGAGGAAATGGATGCGGAGAATCCGCCCGGTAAAATCGCAGGAAGGAGAGGAGGAAATGTGATGCTCTATCTAGGTGGGACTTCGTTTGAACCAGTTTGGACAGATGGAATCGCTGTCTCACTGACATGGTGGCCATCAGACTAAGAGTCTGGGCATGTTCAGACGCGAACGATCATCAATTAAGCAGGCGGAATTGTTTTGGTTGTGTTGCTTCAGAAGATTTTTGCTTGTACGCTGTAGAATCCATCCCATTGAGGCTTCGTGTTTTCTGCATGTATGCAGAGGAACAACCTGCTTGACTAGTTTGACATGTTCCAGTCTTTTGGATGAGTTTGTTAC                            ]
[+] EMBL CB965464             [                                                                                                                                                                                                                                           TCCTGAAGCCGCTCTTCGCCTT CACTCCCACCTCGCCGCCTTCTCCCAGAGCAGGAGGCGGGCGATGGCGACGATGCGCCGGCGGCGGACGACGGGCGAGTGCCCGCTGTCCGGCGAGCACTGGTTCGCGGCGGTGCTGGGTGACTCCGTGGCCGGTGTGTGTGGTGTCCACCGGGATCTACAACTTCCTCATCACTGTAGAACAACGTCGTCGTCGTCGGGCTGGTGGTGCTCTGCTGCTTCCCCAGCAGGCCGCCCGCCATCGTCGCGCCCCTCAGCACTATATGTGATCTCGTATCTGAACATTTTCCGGGGAATCATCCCGCCGCTGGGGGGAACGCTCGACCTGTCGCCCATCCTCGCGTTCCTGGTCCTCAACGCCTTGTCCAGCACCGGCGCCGCGCTCCCGGCCGAGCTCCCGGACCCAGCACCGCCGACGTCTCGCGGCGCAACCTCGTCAAGCTCCGTGCTCACCGCAAACCGGAGGAAATGGATGCGGAGAATCCGCCCGGTAAAATCGCAGGAAGGAGAGGAGGAAATGTGATGCTCTATCTAGGTGGGACTTCGTTTGAACCAGTTTGGACAGATGGAATCGCTGTCTCACTGACATGGTGGCCATCAGACTAAGAGTCTGGGCATGTTCAGACGCGAACGATCATCAATTAAGCCGGCGGAATTG TTTGGTTGTGTTG TTCAGAAGA CTTTGCTTGT CGCTGTAGAAT CATCCCA TGAGG GTCGGGTTcctcggtc                                                                                             ]




>consensus_10945#0
CCCTTCGTTTCCCACCCACCACCTCTCTCCGGCGTGCTCGCTCGCACACAGTCCCCAATG
GCCTCCCGGAACGCCGACCCGCCGCGTCACCACCCCTCGACGCCGCCTCTCCTCCTCGCC
ATGCGCCACCTCCCCTTCCCGGGCGTCCACCGGCCGCGCGCGCTCCCCGCCCCGGACCTC
GCGCCCCTCGCCGCCCGCCTCGAAGAGCTCGCTGCCGCCGCGGCCGCGCACCCGCTCCTG
AAGCCGCTCTTCGCCTTCCACTCCCACCTCGCCGCCTTCTCCCAGAGCAGGAGGCGGGCG
ATGGCGACGATGCGCCGGCGGCGGACGACGGGCGAGTGCCCGCTGTCCGGCGAGCACTGC
TTCGCGGCGGTGCTGGGTGACTCCGTGGCCGGTGTGGTGGTGTCCAGCGGCATCAACAAC
TTCCTCAGCCTGTACAACACCGTCCTCGTCGTCAGGCTCGTGCTCACCTGGTTCCCCAAC
ACGCCGCCCGCCATCGTCGCGCCCCTCAGCACGATATGTGATCCGTATCTGAACATTTTC
CGGGGAATCATCCCGCCGCTGGGGGGAACGCTCGACCTGTCGCCCATCCTCGCGTTCCTG
GTCCTCAACGCCTTGTCCAGCACCGCCGCCGCGCTCCCGGCCGAGCTCCCGGACCCAGCA
CCGCCGACGTCTCGCGGCGCAACCTCGTCAAGCTCCGTGCTCACCGCAAACCGGAGGAAA
TGGATGCGGAGAATCCGCCCGGTAAAATCGCAGGAAGGAGAGGAGGAAATGTGATGCTCT
ATCTAGGTGGGACTTCGTTTGAACCAGTTTGGACAGATGGAATCGCTGTCTCACTGACAT
GGTGGCCATCAGACTAAGAGTCTGGGCATGTTCAGACGCGAACGATCATCAATTAAGCAG
GCGGAATTGTTTTGGTTGTGTTGCTTCAGAAGATTTTTGCTTGTACGCTGTAGAATCCAT
CCCATTGAGGCTTCGTGTTTTCTGCATGTATGCAGAGGAACAACCTGCTTGACTAGTTTG
ACATGTTCCAGTCTTTTGGATGAGTTTGTTACTTTGTTGATGAATCGCATGCTCACTGTT

consensusID : consensus_10945#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 445
fasta sequence

                              [TGCAAAAACACTCTCTCGNGNCGTGCTCGANCGCACACNGTCCCCAATGGCCTCCCGGAACGCCGACCCGCCGCGTCACCGCCCCTCGACGCCGCCTCTCCTCCTCGCCATGCGCCACCTCCCCTTCCCGGGCGTCCACCGGCCGCGCGCGCTCCCCGCCCCGGACCTCGCGCCCCTCGCCGCCCGCCTCGAAGAGCTCGCTGCCGCCGCGGCCGCGCACCCGCTCCTGAAGCCGCTCTTCGCCTTCCACTCCCACCTCGCCGCCTTCTCCCAGAGCAGGAGGCGGGCGATGGCGANNATGCGCCGGCGGCGGACGACGGGCGAGTGCCCGCTGTCCGGCGAGCACTGCTTCGCGGCGGTGCTGGGTGACTCCGTGGCCGGTGTGGTGGTGTCCANCGGCATCAACAACTTCCTCAGCCTGTACAACACCGTCCTCGTCGTNAGG]

[+] EMBL AA751951             [TGCAAAAACACTCTCTCGNGNCGTGCTCGANCGCACACNGTCCCCAATGGCCTCCCGGAACGCCGACCCGCCGCGTCACCGCCCCTCGACGCCGCCTCTCCTCCTCGCCATGCGCCACCTCCCCTTCCCGGGCGTCCACCGGCCGCGCGCGCTCCCCGCCCCGGACCTCGCGCCCCTCGCCGCCCGCCTCGAAGAGCTCGCTGCCGCCGCGGCCGCGCACCCGCTCCTGAAGCCGCTCTTCGCCTTCCACTCCCACCTCGCCGCCTTCTCCCAGAGCAGGAGGCGGGCGATGGCGANNATGCGCCGGCGGCGGACGACGGGCGAGTGCCCGCTGTCCGGCGAGCACTGCTTCGCGGCGGTGCTGGGTGACTCCGTGGCCGGTGTGGTGGTGTCCANCGGCATCAACAACTTCCTCAGCCTGTACAACACCGTCCTCGTCGTNAGG]




>consensus_10945#1
TGCAAAAACACTCTCTCGNGNCGTGCTCGANCGCACACNGTCCCCAATGGCCTCCCGGAA
CGCCGACCCGCCGCGTCACCGCCCCTCGACGCCGCCTCTCCTCCTCGCCATGCGCCACCT
CCCCTTCCCGGGCGTCCACCGGCCGCGCGCGCTCCCCGCCCCGGACCTCGCGCCCCTCGC
CGCCCGCCTCGAAGAGCTCGCTGCCGCCGCGGCCGCGCACCCGCTCCTGAAGCCGCTCTT
CGCCTTCCACTCCCACCTCGCCGCCTTCTCCCAGAGCAGGAGGCGGGCGATGGCGANNAT
GCGCCGGCGGCGGACGACGGGCGAGTGCCCGCTGTCCGGCGAGCACTGCTTCGCGGCGGT
GCTGGGTGACTCCGTGGCCGGTGTGGTGGTGTCCANCGGCATCAACAACTTCCTCAGCCT
GTACAACACCGTCCTCGTCGTNAGG

consensusID : consensus_10945#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 230
fasta sequence

                              [AGGAATAAGCTTGCGGCCGCGCACCCGCTCCTGAAGCCGCTCTTCGCCTTCCACTCCCACCTCGCCGCCTTCTCCCAGAGCAGGAGGCGGGCGATGGCGACGATGCGCCGGCGGCGGACGACGGGCGAGTGCCCGCTGTCCGGCGAGCACTGCTTCGCGGCGGTGCTGGGTGACTCCGTGGCCGGTGTGGTGGTGTCCAGCGGCATCAACAACTTCCTCAGCCTGTACAA]

[+] EMBL BI306645             [AGGAATAAGCTTGCGGCCGCGCACCCGCTCCTGAAGCCGCTCTTCGCCTTCCACTCCCACCTCGCCGCCTTCTCCCAGAGCAGGAGGCGGGCGATGGCGACGATGCGCCGGCGGCGGACGACGGGCGAGTGCCCGCTGTCCGGCGAGCACTGCTTCGCGGCGGTGCTGGGTGACTCCGTGGCCGGTGTGGTGGTGTCCAGCGGCATCAACAACTTCCTCAGCCTGTACAA]




>consensus_10945#2
AGGAATAAGCTTGCGGCCGCGCACCCGCTCCTGAAGCCGCTCTTCGCCTTCCACTCCCAC
CTCGCCGCCTTCTCCCAGAGCAGGAGGCGGGCGATGGCGACGATGCGCCGGCGGCGGACG
ACGGGCGAGTGCCCGCTGTCCGGCGAGCACTGCTTCGCGGCGGTGCTGGGTGACTCCGTG
GCCGGTGTGGTGGTGTCCAGCGGCATCAACAACTTCCTCAGCCTGTACAA

consensusID : consensus_10945#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 182
fasta sequence

                              [TCCTGAAGCCGCTCTTCGCTTCACTCCCACCTCGCCGCCTTCTCCCAGAGCAGTGAGGCGGGCGATGGCTGACGATGCGCCGTGTGTGTGTGACGATGTGGCGACGTGCCCTGCTGTCCTGGCGACGCACTTGCTTCTGCTGGCTGTGTGCTTGGGTTGACTCCTGTGTGCCTGGATGTTGG]

[+] EMBL CB965984             [TCCTGAAGCCGCTCTTCGCTTCACTCCCACCTCGCCGCCTTCTCCCAGAGCAGTGAGGCGGGCGATGGCTGACGATGCGCCGTGTGTGTGTGACGATGTGGCGACGTGCCCTGCTGTCCTGGCGACGCACTTGCTTCTGCTGGCTGTGTGCTTGGGTTGACTCCTGTGTGCCTGGATGTTGG]




>consensus_10945#3
TCCTGAAGCCGCTCTTCGCTTCACTCCCACCTCGCCGCCTTCTCCCAGAGCAGTGAGGCG
GGCGATGGCTGACGATGCGCCGTGTGTGTGTGACGATGTGGCGACGTGCCCTGCTGTCCT
GGCGACGCACTTGCTTCTGCTGGCTGTGTGCTTGGGTTGACTCCTGTGTGCCTGGATGTT
GG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10945#0      CCCTTCGTTTCCCACCCACCACCTCTCTC-CGGCGTGCTCGCTCGCACACAGTCCCCAAT 59
consensus_10945#1      ------------TGCAAAAACACTCTCTCGNGNCGTGCTCGANCGCACACNGTCCCCAAT 48
consensus_10945#2      ------------------------------------------------------------
consensus_10945#3      ------------------------------------------------------------
                                                                                   

consensus_10945#0      GGCCTCCCGGAACGCCGACCCGCCGCGTCACCACCCCTCGACGCCGCCTCTCCTCCTCGC 119
consensus_10945#1      GGCCTCCCGGAACGCCGACCCGCCGCGTCACCGCCCCTCGACGCCGCCTCTCCTCCTCGC 108
consensus_10945#2      ------------------------------------------------------------
consensus_10945#3      ------------------------------------------------------------
                                                                                   

consensus_10945#0      CATGCGCCACCTCCCCTTCCCGGGCGTCCACCGGCCGCGCGCGCTCCCCGCCCCGGACCT 179
consensus_10945#1      CATGCGCCACCTCCCCTTCCCGGGCGTCCACCGGCCGCGCGCGCTCCCCGCCCCGGACCT 168
consensus_10945#2      ------------------------------------------------------------
consensus_10945#3      ------------------------------------------------------------
                                                                                   

consensus_10945#0      CGCGCCCCTCGCCGCCCGCCTCGAAGAGCTCGCTGCCGCCGCGGCCGCGCACCCGCTCCT 239
consensus_10945#1      CGCGCCCCTCGCCGCCCGCCTCGAAGAGCTCGCTGCCGCCGCGGCCGCGCACCCGCTCCT 228
consensus_10945#2      -----------------------AGGAATAAGCT-----TGCGGCCGCGCACCCGCTCCT 32
consensus_10945#3      --------------------------------------------------------TCCT 4
                                                                               ****

consensus_10945#0      GAAGCCGCTCTTCGCCTTCCACTCCCACCTCGCCGCCTTCTCCCAGAGCAG-GAGGCGGG 298
consensus_10945#1      GAAGCCGCTCTTCGCCTTCCACTCCCACCTCGCCGCCTTCTCCCAGAGCAG-GAGGCGGG 287
consensus_10945#2      GAAGCCGCTCTTCGCCTTCCACTCCCACCTCGCCGCCTTCTCCCAGAGCAG-GAGGCGGG 91
consensus_10945#3      GAAGCCGCTCTTCGCTT--CACTCCCACCTCGCCGCCTTCTCCCAGAGCAGTGAGGCGGG 62
                       *************** *  ******************************** ********

consensus_10945#0      CGATGGC-GACGATGCGCCGGCGGCGGACGACGGGCGAGTGCCCGCTGTCCGGCGAGCAC 357
consensus_10945#1      CGATGGC-GANNATGCGCCGGCGGCGGACGACGGGCGAGTGCCCGCTGTCCGGCGAGCAC 346
consensus_10945#2      CGATGGC-GACGATGCGCCGGCGGCGGACGACGGGCGAGTGCCCGCTGTCCGGCGAGCAC 150
consensus_10945#3      CGATGGCTGACGATGCGCCGTGTGTGTGTGACGATGTGGCGAC--GTGCCCTGCTGTCCT 120
                       ******* **  ********   * *   ****     * * *   ** ** **   *  

consensus_10945#0      TGCTTCGCGGCGGTGCTGGGTGACTCCGTGGCCGGTGTGGTG---GTGTCCAGCGGCATC 414
consensus_10945#1      TGCTTCGCGGCGGTGCTGGGTGACTCCGTGGCCGGTGTGGTG---GTGTCCANCGGCATC 403
consensus_10945#2      TGCTTCGCGGCGGTGCTGGGTGACTCCGTGGCCGGTGTGGTG---GTGTCCAGCGGCATC 207
consensus_10945#3      GGCGACGCACTTGCTTCTGCTGGCTGTGTGCTTGGGTTGACTCCTGTGTGCCTGGATGTT 180
                        **  ***    *     * ** **  ***   **  **      **** *   *   * 

consensus_10945#0      AACAACTTCCTCAGCCTGTACAACACCGTCCTCGTCGTCAGGCTCGTGCTCACCTGGTTC 474
consensus_10945#1      AACAACTTCCTCAGCCTGTACAACACCGTCCTCGTCGTNAGG------------------ 445
consensus_10945#2      AACAACTTCCTCAGCCTGTACAA------------------------------------- 230
consensus_10945#3      GG---------------------------------------------------------- 182
                                                                                   

consensus_10945#0      CCCAACACGCCGCCCGCCATCGTCGCGCCCCTCAGCACGATATGTGATCCGTATCTGAAC 534
consensus_10945#1      ------------------------------------------------------------
consensus_10945#2      ------------------------------------------------------------
consensus_10945#3      ------------------------------------------------------------
                                                                                   

consensus_10945#0      ATTTTCCGGGGAATCATCCCGCCGCTGGGGGGAACGCTCGACCTGTCGCCCATCCTCGCG 594
consensus_10945#1      ------------------------------------------------------------
consensus_10945#2      ------------------------------------------------------------
consensus_10945#3      ------------------------------------------------------------
                                                                                   

consensus_10945#0      TTCCTGGTCCTCAACGCCTTGTCCAGCACCGCCGCCGCGCTCCCGGCCGAGCTCCCGGAC 654
consensus_10945#1      ------------------------------------------------------------
consensus_10945#2      ------------------------------------------------------------
consensus_10945#3      ------------------------------------------------------------
                                                                                   

consensus_10945#0      CCAGCACCGCCGACGTCTCGCGGCGCAACCTCGTCAAGCTCCGTGCTCACCGCAAACCGG 714
consensus_10945#1      ------------------------------------------------------------
consensus_10945#2      ------------------------------------------------------------
consensus_10945#3      ------------------------------------------------------------
                                                                                   

consensus_10945#0      AGGAAATGGATGCGGAGAATCCGCCCGGTAAAATCGCAGGAAGGAGAGGAGGAAATGTGA 774
consensus_10945#1      ------------------------------------------------------------
consensus_10945#2      ------------------------------------------------------------
consensus_10945#3      ------------------------------------------------------------
                                                                                   

consensus_10945#0      TGCTCTATCTAGGTGGGACTTCGTTTGAACCAGTTTGGACAGATGGAATCGCTGTCTCAC 834
consensus_10945#1      ------------------------------------------------------------
consensus_10945#2      ------------------------------------------------------------
consensus_10945#3      ------------------------------------------------------------
                                                                                   

consensus_10945#0      TGACATGGTGGCCATCAGACTAAGAGTCTGGGCATGTTCAGACGCGAACGATCATCAATT 894
consensus_10945#1      ------------------------------------------------------------
consensus_10945#2      ------------------------------------------------------------
consensus_10945#3      ------------------------------------------------------------
                                                                                   

consensus_10945#0      AAGCAGGCGGAATTGTTTTGGTTGTGTTGCTTCAGAAGATTTTTGCTTGTACGCTGTAGA 954
consensus_10945#1      ------------------------------------------------------------
consensus_10945#2      ------------------------------------------------------------
consensus_10945#3      ------------------------------------------------------------
                                                                                   

consensus_10945#0      ATCCATCCCATTGAGGCTTCGTGTTTTCTGCATGTATGCAGAGGAACAACCTGCTTGACT 1014
consensus_10945#1      ------------------------------------------------------------
consensus_10945#2      ------------------------------------------------------------
consensus_10945#3      ------------------------------------------------------------
                                                                                   

consensus_10945#0      AGTTTGACATGTTCCAGTCTTTTGGATGAGTTTGTTACTTTGTTGATGAATCGCATGCTC 1074
consensus_10945#1      ------------------------------------------------------------
consensus_10945#2      ------------------------------------------------------------
consensus_10945#3      ------------------------------------------------------------
                                                                                   

consensus_10945#0      ACTGTT 1080
consensus_10945#1      ------
consensus_10945#2      ------
consensus_10945#3      ------