cluster # 11740

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Oryza sativa
cluster # 11740 cluster # 11740 Sequences # 9 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11740#0 length = 2497 sequences # 7

consensus_11740#1 length = 664 sequences # 2

consensusID : consensus_11740#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2497
fasta sequence

                              [GGCCAACGCCGACCACCTCCTCCACGTCATGCGCGCCGTCGAGGGCGCCGAGGCCACCATCCGCAACCAGTTGGAAGAGAATAATCGCCTCAAAGAGGAACTGATGCAGAAAACGCGACAATTGCAGAGGATTCGGGAAGATGCTGCATCCCAAGCTTCTTCCAGTGGAGTAGCCCAAGACCGCCGCTCATTCGTTGCTACTAAGATGGATGCGTCAAGGTCACCTGCCAGCGCTGCGTCCTCAGATAATTCCCGCACCCCCTCTGCCCTTCACCACAATGGCGCATTCGAAAGTGGAGAGCCTTCAATGCAGCAGACCATCAGGCAAAACAATGCCCTGTCCAATGGAGCATCTAAAAGATCATCAGGGGAGCAGCCTGCCCTCGACAGCGCTGCCGTCTCACAGTTCTCTACTCCATCCTCCCATTCCCTTTCTCCTACTAGGCATAGAAAAGAAGGCGAGCATGATCCTAGGTTGAACCTAGCTGGACAGGGGTTATTGCCTGCTTCAGAGATGGCCTCGAACATGTCATGGAAGCATGATCTTACTGCTAAGATCAAAGAAAATGAGGAAGAGATTGCGCAATTAAGAAAACATCTTGCTGACTACTCATTGAAGCAAGCACGGATACTCGATGATAAATATATGTTGGAAAGGCGCATTGCTCAAATGCGGATGGCATTTGATCAGCAGCAACAAGATTTAATTGATGCAGCATCAAAAGCTTTATCATATAGACAAGATATTATTGAGGAAAACATCCGTCTGGCATATGCAGTGCAGGCTGCACAACAAGAAAGGACAACTTTCATATCTTCGTTGCTGCCTCTTCTGTCTGAATATGAAAACCTGCAGCCTTCTGTTCTTGATGCTCAATCCATCGTCAGCAATTTGAAGGTTTTGTTTAAGCATCTGCAGGAGCAACTTATTATCACTGAGGAGAAATTAAAAGAGTCACGTTATCAGATTACTCCATGGCAAACTGAATTGGCGAATGATGCCACTCTTCCTGTACACTCACCTACGGATCCTCTTGGAAAAGCATTGGTGACTTCAAACAAAAGCAACCTCGATATTGTGACCCAGACACCGTACCCTCATATACAATCTCCAATGTCTTCCCCTGTTCAAGTTAGAGGTGATTGGGGTGTAGCAGGGAACAAAAACCGTCAAGTCATTCCAACTGATGTTCCTCCAAGAAATGTTGATCATGGTGACATGGGAAGAAACTCTCTTTCAAGCAGGA-GGGATGTTTCTTCTCAAGTATCTCAGCATGATCCACATTCTGTCCCATTGGACTTTGAGCCCGAGAATCAAAACCCACCATTCAAGCACCTTAGTAGAAGTGACGTATCGGATGCTTCGGAGGGTGCTGAAGTCCAACATGCACGAGAACATTCTGCTCATTGGGGTCATGGAGACTCAGTTAATTTGGTATCCGGCATTGAGGATACAAACCCTTCATATCCGTATCTTCCTACTGTTCTTGAGGAGCCTGGATCTTCTTTCTCTGAAGCTGCTGAGGATGATCCACTGCCAGGCATAGAGGGCCTTCGAATCACAGGTGAAGCTTTTCCTGGAAGAGAACTCCAAGCAAGCGGGTACTCCACCAATGGAACCACCAGTTGTAATTTTGAGTGGGTGCGCCATTTAGAAGATGGCTCCGTAAATTTCATAGAAGGAGCAAGACAACCTAACTATTTGGTTACTGCCGATGACGTGGACACATTACTAGCTATTGAAGTACAGCCCCTTGGTGATAGAAAAAGAAAGGGGGAAATTGTAAGGTTTTACGCTAATGATCAAAGAAAAATTACTTGCGATCCTGAAACAAAGGAGCTTATTAAGAGAACTCTTGAAACTGGTCATGTATCTTATGAAGTCCAACTACCTCAGGTGAAATTTTTAGATATGTGGGAACCAGCTATTTTGGCAATAAAGAGGGAAGGCTACAGTATTAAATGTACTGGTCAGCGTGGTGTTGTTCTCACAGAGAAATTTCAGCAAGCAACTTCTATTAATATTCCTTACGGGCGTCCGACAGAGTTCTTGATTACATCTGCTGATGGTGTTGAATATAATTTAAAGCCTGCAGAAAATGCACTGCCGCGGGATACCATTGTTCTGGTTTTAAGATTGTTCAGAATTATGGCTGTTGAGAAGAGGAGAGGAAGAAAGAAGAGCCTTTTCTTCAAGTAGGTTTGGCTCCTATACCGTGGTGTATAATTTGTATTCGTGATTGGCTGGATGTATGTAATTAAGCGGGTGATAGGTTTGGCATATTCTTTCGGCTGTATCTTCTGCTGTAAAGGACCATAGGCGATTTAAACACAAGGGCCCCAGGTGATGGGAGTTTTCTTCTTCTTATTTTTTTCCCTTATTCCTTTTAGAAACATGAGTTTTGTCGTTGCAAGGGATGGAAGCGTGCCGCTGATTAGAATTGAAGCTAATTTAGGCTAATAGAATGGAAAAGATAAATAGGCAACAAAAAAAAGG]

[+] EMBL AK100813             [GGCCAACGCCGACCACCTCCTCCACGTCATGCGCGCCGTCGAGGGCGCCGAGGCCACCATCCGCAACCAGTTGGAAGAGAATAATCGCCTCAAAGAGGAACTGATGCAGAAAACGCGACAATTGCAGAGGATTCGGGAAGATGCTGCATCCCAAGCTTCTTCCAGTGGAGTAGCCCAAGACCGCCGCTCATTCGTTGCTACTAAGATGGATGCGTCAAGGTCACCTGCCAGCGCTGCGTCCTCAGATAATTCCCGCACCCCCTCTGCCCTTCACCACAATGGCGCATTCGAAAGTGGAGAGCCTTCAATGCAGCAGACCATCAGGCAAAACAATGCCCTGTCCAATGGAGCATCTAAAAGATCATCAGGGGAGCAGCCTGCCCTCGACAGCGCTGCCGTCTCACAGTTCTCTACTCCATCCTCCCATTCCCTTTCTCCTACTAGGCATAGAAAAGAAGGCGAGCATGATCCTAGGTTGAACCTAGCTGGACAGGGGTTATTGCCTGCTTCAGAGATGGCCTCGAACATGTCATGGAAGCATGATCTTACTGCTAAGATCAAAGAAAATGAGGAAGAGATTGCGCAATTAAGAAAACATCTTGCTGACTACTCATTGAAGCAAGCACGGATACTCGATGATAAATATATGTTGGAAAGGCGCATTGCTCAAATGCGGATGGCATTTGATCAGCAGCAACAAGATTTAATTGATGCAGCATCAAAAGCTTTATCATATAGACAAGATATTATTGAGGAAAACATCCGTCTGGCATATGCAGTGCAGGCTGCACAACAAGAAAGGACAACTTTCATATCTTCGTTGCTGCCTCTTCTGTCTGAATATGAAAACCTGCAGCCTTCTGTTCTTGATGCTCAATCCATCGTCAGCAATTTGAAGGTTTTGTTTAAGCATCTGCAGGAGCAACTTATTATCACTGAGGAGAAATTAAAAGAGTCACGTTATCAGATTACTCCATGGCAAACTGAATTGGCGAATGATGCCACTCTTCCTGTACACTCACCTACGGATCCTCTTGGAAAAGCATTGGTGACTTCAAACAAAAGCAACCTCGATATTGTGACCCAGACACCGTACCCTCATATACAATCTCCAATGTCTTCCCCTGTTCAAGTTAGAGGTGATTGGGGTGTAGCAGGGAACAAAAACCGTCAAGTCATTCCAACTGATGTTCCTCCAAGAAATGTTGATCATGGTGACATGGGAAGAAACTCTCTTTCAAGCAGGA GGGATGTTTCTTCTCAAGTATCTCAGCATGATCCACATTCTGTCCCATTGGACTTTGAGCCCGAGAATCAAAACCCACCATTCAAGCACCTTAGTAGAAGTGACGTATCGGATGCTTCGGAGGGTGCTGAAGTCCAACATGCACGAGAACATTCTGCTCATTGGGGTCATGGAGACTCAGTTAATTTGGTATCCGGCATTGAGGATACAAACCCTTCATATCCGTATCTTCCTACTGTTCTTGAGGAGCCTGGATCTTCTTTCTCTGAAGCTGCTGAGGATGATCCACTGCCAGGCATAGAGGGCCTTCGAATCACAGGTGAAGCTTTTCCTGGAAGAGAACTCCAAGCAAGCGGGTACTCCACCAATGGAACCACCAGTTGTAATTTTGAGTGGGTGCGCCATTTAGAAGATGGCTCCGTAAATTTCATAGAAGGAGCAAGACAACCTAACTATTTGGTTACTGCCGATGACGTGGACACATTACTAGCTATTGAAGTACAGCCCCTTGGTGATAGAAAAAGAAAGGGGGAAATTGTAAGGTTTTACGCTAATGATCAAAGAAAAATTACTTGCGATCCTGAAACAAAGGAGCTTATTAAGAGAACTCTTGAAACTGGTCATGTATCTTATGAAGTCCAACTACCT   GTGAAATTTTTAGATATGTGGGAACCAGCTATTTTGGCAATAAAGAGGGAAGGCTACAGTATTAAATGTACTGGTCAGCGTGGTGTTGTTCTCACAGAGAAATTTCAGCAAGCAACTTCTATTAATATTCCTTACGGGCGTCCGACAGAGTTCTTGATTACATCTGCTGATGGTGTTGAATATAATTTAAAGCCTGCAGAAAATGCACTGCCGCGGGATACCATTGTTCTGGTTTTAAGATTGTTCAGAATTATGGCTGTTGAGAAGAGGAGAGGAAGAAAGAAGAGCCTTTTCTTCAAGTAGGTTTGGCTCCTATACCGTGGTGTATAATTTGTATTCGTGATTGGCTGGATGTATGTAATTAAGCGGGTGATAGGTTTGGCATATTCTTTCGGCTGTATCTTCTGCTGTAAAGGACCATAGGCGATTTAAACACAAGGGCCCCAGGTGATGGGAGTTTTCTTCTTCTTATTTTTTTCCCTTATTCCTTTTAGAAACATGAGTTTTGTCGTTGCAAGGGATGGAAGCGTGCCGCTG                                                               ]
[+] EMBL CB633876             [GGCCAACGCCGACCACCTCCTCCACGTCATGCGCGCCGTCGAGGGCGCCGAGGCCACCATCCGCAACCAGTTGGAAGAGAATAATCGCCTCAAAGAGGAACTGATGCAGAAAACGCGACAATTGCAGAGGATTCGGGAAGATGCTGCATCCCAAGCTTCTTCCAGTGGAGTAGCCCAAGACCGCCGCTCATTCGGTGCTACTAAGATGGATGCGTCAAGGTCACCTGCCAGCGCTGCGTCCTCAGATAATTCCCGCACCCCCTCTGCCCTTCACCACAATGGCGCATTCGAAAGTGGAGAGCCTTCAATGCAGCAGACCATCAGGCAAAACAATGCCCTGTCCAATGGAGCATCTAAAAGATCATCAGGGGAGCAGCCTGCCCTCGACAGCGCTGCCGTCTCACAGTTCTCTACTCCATCCTCCCATTCCCTTTCTCCTACTAGGCATAGAAAAGAAGGCGAGCATGATCCTAGGTTGAACCTAGCTGGACAGGGGTTATTGCCTGCTTCAGAGATGGCCTCGAACATGTCATGGAAGCATGATCTTACTGCTAAGATCAAAGAAAATGAGGAAGAGATTGCGCAATTAAGAAAACATCTTGCTGACTACTCATTGAAGCAAGCACGGATACTCGATGATATATATATGTTGGAGAGGCGCATTGCTCAAATGCGGATGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB671232             [GGCCAACGCCGACCACCTCCTCCACGTCATGCGCGCCGTCGAGGGCGCCGAGGCCACCATCCGCAACCAGTTGGAAGAGAATAATCGCCTCAAAGAGGAACTGATGCAGAAAACGCGACAATTGCAGAGGATTCGGGAAGATGCTGCATCCCAAGCTTCTTCCAGTGGAGTAGCCCAAGACCGCCGCTCATTCGTTGCTACTAAGATGGATGCGTCAAGGTCACCTGCCAGCGCTGCGTCCTCAGATAATTCCCGCACCCCCTCTGCCCTTCACCACAATGGCGCATTCGAAAGTGGAGAGCCTTCAATGCAGCAGACCATCAGGCAAAACAATGCCCTGTCCAATGGAGCATCTAAAAGATCATCAGGGGAGCAGCCTGCCCTCGACAGCGCTGCCGTCTCACAGTTCTCTACTCCATCCTCCCATTCCCTTTCTCCTACTAGGCATAGAAAAGAAGGCGAGCATGATCCTAGGTTGAACCTAGCTGGACAGGGGTTATTGCCTGCTTCAGAGATGGCCTCGAACATGTCATGGAAGCATGATCTTACTGCTAAGATCAAAGAAAATGAGGAAGAGATTGCGCAATTAAGAAAACATCTTGCTGACTACTCATTGAAGCAAGCACGGATACTCGATGATAAATATATGTTGGAAAAGCGCATTGCTCAAATGCGGATGGCATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BP184428             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AAGAAGGCGAGCATGATCCTAGGTTGAACCTAGCTGGACAGGGGTTATTGCCTGCTTCAGAGATGGCCTCGAACATGTCATGGAAGCATGATCTTACTGCTAAGATCAAAGAAAATGAGGAAGAGATTGCGCAATTAAGAAAACATCTTGCTGACTACTCATTGAAGCAAGCACGGATACTCGATGATAAATATATGTTGGAAAGGCGCATTGCTCAAATGCGGATGGCATTTGATCAGCAGCAACAAGATTTAATTGATGCAGCATCAAAAGCTTTATCATATAGACAAGATATTATTGAGGAAAACATCCGTCTGGCATATGCAGTGCAGGCTGCACAACAAGAAAGGACAACTTTCATATCTTCGTTGCTGCCTCTTCTGTCTGAATATGAAAACCTGCAGCCTTCTG TCTTGATGCTCAATCCATCGTCAGCAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF303070             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     cgaggATGAAAACCTGCACCCTTCTGTTCTTGATGCTCAATCCATCGTCAGCAATTTGAAGGTTTTGTTTAAGCATCTGCAGGAGCAACTTATTATCACTGAGGAGAAATTAAAAGAGTCACGTTATCAGATTACTCCATGGCAAACTGAATTGGCGAATGATGCCACTCTTCCTGTACACTCACCTACGGATCCTCTTGGAAAAGCATTGGTGACTTCAAACAAAAGCAACCTCGATATTGTGACCCAGACACCGTACCCTCATATACAATCTCCAATGTCTTCCCCTGTTCAAGTTAGAGGTGATTGGGGTGTAGCAGGGAACAAAAACCGTCAAGTCATTCCAACTGATGTTCCTCCAAGAAATGTTGATCATGGTGACATGGGAAGAAACTCTCTTTCAAGCAGGAGGGGATGTTTCTTCTCAAGTATCTCAGCATGATCCACATTCTGTCCCATTGGACTTTGAGCCCGAGAATCAAAACCCACCATTCAAGCACCTTAGTAGAAGTGACGTATCGGATGCTTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB633877             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCCCTTGATGATAGAAAAAGAAAGGGGGAAATTGTAAGGTTTTACGCTAATGATCAAAGAAAAATTACTTGCGATCCTGAAACAAAGGAGCTTATTAAGAGAACTCTTGAAACTGGTCATGTATCTTATGAAGTCCAACTACCTCAGGTGAAATTTTTAGATATGTGGGAACCAGCTATTTTGGCAATAAAGAGGGAAGGCTACAGTATTAAATGTACTGGTCAGCGTGGTGTTGTTCTCACAGAGAAATTTCAGCAAGCAACTTCTATTAATATTCCTTACGGGCGTCCGACAGAGTTCTTGATTACATCTGCTGATGGTGTTGAATATAATTTAAAGCCTGCAGAAAATGCACTGCCGCGGGATACCATTGTTCTGGTTTTAAGATTGTTCAGAATTATGGCTGTTGAGAAGAGGAGAGGAAGAAAGAAGAGCCTTTTCTTCAAGTAGGTTTGGCTCCTATACCGTGGTGTATAATTTGTATTCGTGATTGGCTGGATGTATGTAATTAAGCGGGTGATAGGTTTGGCATATTCTTTCGGCTGTATCTTCTGCTGTAAAGGACCATAGGCGATTTAAACACAAGGGCCCCAGGTGATGGGAGTTTTCTTCTTCTTATTTTTTTCCCTTATTCGGTTTAGAAACATGAGTTTTGTCGTTGCAAGGGATGGAAGCGTGCCGCTGATTAGAATTGAAGCTAATTTAGGCTAATAGAATGGAAAAGATAAATAGGCAACAAAAAAAAGG]
[+] EMBL BP184429             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCAAAGAAAAATTACTTGCGATCCTGAAACAAAGGAGCTTATTAAGAGAACTCTTGAAACTGGTCATGTATCTTATGAAGTCCAACTACCTCAGGTGAAATTTTTAGATATGTGGGAACCAGCTATTTTGGCAATAAAGAGGGAAGGCTACAGTATTAAATGTACTGGTCAGCGTGGTGTTGTTCTCACAGAGAAATTTCAGCAAGCAACTTCTATTAATATTCCTTACGGGCGTCCGACAGAGTTCTTGATTACATCTGCTGATGGTGTTGAATATAATTTAAAGCCTGCAGAAAATGCACTGCCGCGGGATACCATTGTTCTGGTTTTAAGATTGTTCAGAATTATGGCTGTTGAGAAGAGGAGAGGAAGAAAGAAGAGCCTTTTCTTCAAGTAGGTTTGGCTCCTATACCGTGGTGTATAATTTGTATTCGTGATTGGCTGGATGTATGTAATTAAGCGGGTGATAGGTTTGGCATATTCTTTCGGCTGTATCTTCTGCTGTAAAGGACCATAGGCGATTTAAACACAAGGGCCCCAGGTGATGGGAGTTTTCTTCTTCTTATTTTTTTCCCTTATTCCTTTTAGAAACATGAGTTTTGTCGTTGCAAGGGATGGAAGCGTGCCGCTGATTAGAATTGAAaaa                                                ]




>consensus_11740#0
GGCCAACGCCGACCACCTCCTCCACGTCATGCGCGCCGTCGAGGGCGCCGAGGCCACCAT
CCGCAACCAGTTGGAAGAGAATAATCGCCTCAAAGAGGAACTGATGCAGAAAACGCGACA
ATTGCAGAGGATTCGGGAAGATGCTGCATCCCAAGCTTCTTCCAGTGGAGTAGCCCAAGA
CCGCCGCTCATTCGTTGCTACTAAGATGGATGCGTCAAGGTCACCTGCCAGCGCTGCGTC
CTCAGATAATTCCCGCACCCCCTCTGCCCTTCACCACAATGGCGCATTCGAAAGTGGAGA
GCCTTCAATGCAGCAGACCATCAGGCAAAACAATGCCCTGTCCAATGGAGCATCTAAAAG
ATCATCAGGGGAGCAGCCTGCCCTCGACAGCGCTGCCGTCTCACAGTTCTCTACTCCATC
CTCCCATTCCCTTTCTCCTACTAGGCATAGAAAAGAAGGCGAGCATGATCCTAGGTTGAA
CCTAGCTGGACAGGGGTTATTGCCTGCTTCAGAGATGGCCTCGAACATGTCATGGAAGCA
TGATCTTACTGCTAAGATCAAAGAAAATGAGGAAGAGATTGCGCAATTAAGAAAACATCT
TGCTGACTACTCATTGAAGCAAGCACGGATACTCGATGATAAATATATGTTGGAAAGGCG
CATTGCTCAAATGCGGATGGCATTTGATCAGCAGCAACAAGATTTAATTGATGCAGCATC
AAAAGCTTTATCATATAGACAAGATATTATTGAGGAAAACATCCGTCTGGCATATGCAGT
GCAGGCTGCACAACAAGAAAGGACAACTTTCATATCTTCGTTGCTGCCTCTTCTGTCTGA
ATATGAAAACCTGCAGCCTTCTGTTCTTGATGCTCAATCCATCGTCAGCAATTTGAAGGT
TTTGTTTAAGCATCTGCAGGAGCAACTTATTATCACTGAGGAGAAATTAAAAGAGTCACG
TTATCAGATTACTCCATGGCAAACTGAATTGGCGAATGATGCCACTCTTCCTGTACACTC
ACCTACGGATCCTCTTGGAAAAGCATTGGTGACTTCAAACAAAAGCAACCTCGATATTGT
GACCCAGACACCGTACCCTCATATACAATCTCCAATGTCTTCCCCTGTTCAAGTTAGAGG
TGATTGGGGTGTAGCAGGGAACAAAAACCGTCAAGTCATTCCAACTGATGTTCCTCCAAG
AAATGTTGATCATGGTGACATGGGAAGAAACTCTCTTTCAAGCAGGAGGGATGTTTCTTC
TCAAGTATCTCAGCATGATCCACATTCTGTCCCATTGGACTTTGAGCCCGAGAATCAAAA
CCCACCATTCAAGCACCTTAGTAGAAGTGACGTATCGGATGCTTCGGAGGGTGCTGAAGT
CCAACATGCACGAGAACATTCTGCTCATTGGGGTCATGGAGACTCAGTTAATTTGGTATC
CGGCATTGAGGATACAAACCCTTCATATCCGTATCTTCCTACTGTTCTTGAGGAGCCTGG
ATCTTCTTTCTCTGAAGCTGCTGAGGATGATCCACTGCCAGGCATAGAGGGCCTTCGAAT
CACAGGTGAAGCTTTTCCTGGAAGAGAACTCCAAGCAAGCGGGTACTCCACCAATGGAAC
CACCAGTTGTAATTTTGAGTGGGTGCGCCATTTAGAAGATGGCTCCGTAAATTTCATAGA
AGGAGCAAGACAACCTAACTATTTGGTTACTGCCGATGACGTGGACACATTACTAGCTAT
TGAAGTACAGCCCCTTGGTGATAGAAAAAGAAAGGGGGAAATTGTAAGGTTTTACGCTAA
TGATCAAAGAAAAATTACTTGCGATCCTGAAACAAAGGAGCTTATTAAGAGAACTCTTGA
AACTGGTCATGTATCTTATGAAGTCCAACTACCTCAGGTGAAATTTTTAGATATGTGGGA
ACCAGCTATTTTGGCAATAAAGAGGGAAGGCTACAGTATTAAATGTACTGGTCAGCGTGG
TGTTGTTCTCACAGAGAAATTTCAGCAAGCAACTTCTATTAATATTCCTTACGGGCGTCC
GACAGAGTTCTTGATTACATCTGCTGATGGTGTTGAATATAATTTAAAGCCTGCAGAAAA
TGCACTGCCGCGGGATACCATTGTTCTGGTTTTAAGATTGTTCAGAATTATGGCTGTTGA
GAAGAGGAGAGGAAGAAAGAAGAGCCTTTTCTTCAAGTAGGTTTGGCTCCTATACCGTGG
TGTATAATTTGTATTCGTGATTGGCTGGATGTATGTAATTAAGCGGGTGATAGGTTTGGC
ATATTCTTTCGGCTGTATCTTCTGCTGTAAAGGACCATAGGCGATTTAAACACAAGGGCC
CCAGGTGATGGGAGTTTTCTTCTTCTTATTTTTTTCCCTTATTCCTTTTAGAAACATGAG
TTTTGTCGTTGCAAGGGATGGAAGCGTGCCGCTGATTAGAATTGAAGCTAATTTAGGCTA
ATAGAATGGAAAAGATAAATAGGCAACAAAAAAAAGG

consensusID : consensus_11740#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 664
fasta sequence

                              [GTTCCGACAGAGTTCTNGATTACATCTGCTGATGGTGTTTGATATAATTTAAACCTGCAGAAGATGCACCTGCCGCGGGATACCATTGTTCTGGTTTTAAGATTGTTCAGAATTATGGCCTGTTGAGAAGAGGAGAGGAAGAAAGAAAGACCTTTTCTTCAAGTAGGTTTTGGCTCCTATACCGTGGTGTATAATTTGTATTCGTGATTGGCTGGATGTATGTAATTAAGCGGGTGATAGGTTTGGCATATTCTTTCGGCTGTATCTTCTGCTGTAAAGGACCATAGGCGATTTAAACACAAGGGCCCCAGGTGATGGGAGTTTTCTTCTTCTTATTTTTTTCCCTTATTCCTTTTAGAAACATGAGTTTGTCGTTGCAAGGGATGGAAGCGTGCCGCTGATTAGAATTGAAGCTAATTTATGCTAATAGAATGGAAAAGATAAATAGGCAAGTCCTAGGATGCTCTGGAAATATTCCCTGCATCGTAGGGTAGTGACCATCATCAGTTCACGGGTGACCTCCCTGCCTGCTGGTTACTTCCAACGAGCTTGCAATTTTGGAGATGACGCATAGCAGTACCTGAACATGTATACAAGTATAACTGATGTATCATATGCTGTGTAATTAAAAAAGACGAAATAGACTTCAGTAATTTAAGAAAAA]

[+] EMBL BI805584             [GTTCCGACAGAGTTCTNGATTACATCTGCTGATGGTGTTTGATATAATTTAAACCTGCAGAAGATGCACCTGCCGCGGGATACCATTGTTCTGGTTTTAAGATTGTTCAGAATTATGGCCTGTTGAGAAGAGGAGAGGAAGAAAGAAAGACCTTTTCTTCAAGTAGGTTTTGGCTCCTATACCGTGGTGTATAATTTGTATTCGTGATTGGCTGGATGTATGTAATTAAGCGGGTGATAGGTTTGGCATATTCTTTCGGCTGTATCTTCTGCTGTAAAGGACCATAGGCGATTTAAACACAAGGGCCCCAGGTGATGGGAGTTTTCTTCTTCTTATTTTTTTCCCTTATTCCTTTTAGAAACATGAGTTTGTCGTTGCAAGGGATGGAAGCGTGCCGCTGATTAGAATTGAAGCTAATTTATGCTAATAGAATGGAAAAGATAAATAGGCAAGTCCTAGGATGCTCTGGAAATATTCCCTGCATCGTAGGGTAGTGACCATCATCAGTTCACGGGTGACCTCCCTGCCTGCTGGTTACTTCCAACGAGCTTGCAATTTTGGAGATGACGCATAGCAGTACCTGAACATGTATACAAGTATAACTGATGTATCATATGCTGTGTAATTAAAAAA                               ]
[+] EMBL BI812665             [                                                                                                                                                                                                                                                                                                                                                                            agtTTTGTC TTGCAAGGGATGGAAGCGT CCCCTGATTAGAATTGAA CTAATTTATGCTAATAGAATGGGAAAGATAAA     AAGTCCTAGGATGCTCTGGAAATATTCCCTGTATCGTAGGGTAGTGACCATCATCAGTTCACGGGTGACCTCCCTGCCTGCTGGTTACTTCC ACGAGCTTGC ATTTTGGAGATGATGCATAGCAGTACCTGAACATGTATACAAGTATAACTGATGTATCATCTGCTGTGTAATTATTTGAGACGAAATAGACTTCAGTAATTTAAGAAAAA]




>consensus_11740#1
GTTCCGACAGAGTTCTNGATTACATCTGCTGATGGTGTTTGATATAATTTAAACCTGCAG
AAGATGCACCTGCCGCGGGATACCATTGTTCTGGTTTTAAGATTGTTCAGAATTATGGCC
TGTTGAGAAGAGGAGAGGAAGAAAGAAAGACCTTTTCTTCAAGTAGGTTTTGGCTCCTAT
ACCGTGGTGTATAATTTGTATTCGTGATTGGCTGGATGTATGTAATTAAGCGGGTGATAG
GTTTGGCATATTCTTTCGGCTGTATCTTCTGCTGTAAAGGACCATAGGCGATTTAAACAC
AAGGGCCCCAGGTGATGGGAGTTTTCTTCTTCTTATTTTTTTCCCTTATTCCTTTTAGAA
ACATGAGTTTGTCGTTGCAAGGGATGGAAGCGTGCCGCTGATTAGAATTGAAGCTAATTT
ATGCTAATAGAATGGAAAAGATAAATAGGCAAGTCCTAGGATGCTCTGGAAATATTCCCT
GCATCGTAGGGTAGTGACCATCATCAGTTCACGGGTGACCTCCCTGCCTGCTGGTTACTT
CCAACGAGCTTGCAATTTTGGAGATGACGCATAGCAGTACCTGAACATGTATACAAGTAT
AACTGATGTATCATATGCTGTGTAATTAAAAAAGACGAAATAGACTTCAGTAATTTAAGA
AAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11740#0      GGCCAACGCCGACCACCTCCTCCACGTCATGCGCGCCGTCGAGGGCGCCGAGGCCACCAT 60
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      CCGCAACCAGTTGGAAGAGAATAATCGCCTCAAAGAGGAACTGATGCAGAAAACGCGACA 120
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      ATTGCAGAGGATTCGGGAAGATGCTGCATCCCAAGCTTCTTCCAGTGGAGTAGCCCAAGA 180
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      CCGCCGCTCATTCGTTGCTACTAAGATGGATGCGTCAAGGTCACCTGCCAGCGCTGCGTC 240
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      CTCAGATAATTCCCGCACCCCCTCTGCCCTTCACCACAATGGCGCATTCGAAAGTGGAGA 300
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      GCCTTCAATGCAGCAGACCATCAGGCAAAACAATGCCCTGTCCAATGGAGCATCTAAAAG 360
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      ATCATCAGGGGAGCAGCCTGCCCTCGACAGCGCTGCCGTCTCACAGTTCTCTACTCCATC 420
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      CTCCCATTCCCTTTCTCCTACTAGGCATAGAAAAGAAGGCGAGCATGATCCTAGGTTGAA 480
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      CCTAGCTGGACAGGGGTTATTGCCTGCTTCAGAGATGGCCTCGAACATGTCATGGAAGCA 540
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      TGATCTTACTGCTAAGATCAAAGAAAATGAGGAAGAGATTGCGCAATTAAGAAAACATCT 600
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      TGCTGACTACTCATTGAAGCAAGCACGGATACTCGATGATAAATATATGTTGGAAAGGCG 660
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      CATTGCTCAAATGCGGATGGCATTTGATCAGCAGCAACAAGATTTAATTGATGCAGCATC 720
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      AAAAGCTTTATCATATAGACAAGATATTATTGAGGAAAACATCCGTCTGGCATATGCAGT 780
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      GCAGGCTGCACAACAAGAAAGGACAACTTTCATATCTTCGTTGCTGCCTCTTCTGTCTGA 840
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      ATATGAAAACCTGCAGCCTTCTGTTCTTGATGCTCAATCCATCGTCAGCAATTTGAAGGT 900
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      TTTGTTTAAGCATCTGCAGGAGCAACTTATTATCACTGAGGAGAAATTAAAAGAGTCACG 960
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      TTATCAGATTACTCCATGGCAAACTGAATTGGCGAATGATGCCACTCTTCCTGTACACTC 1020
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      ACCTACGGATCCTCTTGGAAAAGCATTGGTGACTTCAAACAAAAGCAACCTCGATATTGT 1080
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      GACCCAGACACCGTACCCTCATATACAATCTCCAATGTCTTCCCCTGTTCAAGTTAGAGG 1140
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      TGATTGGGGTGTAGCAGGGAACAAAAACCGTCAAGTCATTCCAACTGATGTTCCTCCAAG 1200
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      AAATGTTGATCATGGTGACATGGGAAGAAACTCTCTTTCAAGCAGGAGGGATGTTTCTTC 1260
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      TCAAGTATCTCAGCATGATCCACATTCTGTCCCATTGGACTTTGAGCCCGAGAATCAAAA 1320
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      CCCACCATTCAAGCACCTTAGTAGAAGTGACGTATCGGATGCTTCGGAGGGTGCTGAAGT 1380
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      CCAACATGCACGAGAACATTCTGCTCATTGGGGTCATGGAGACTCAGTTAATTTGGTATC 1440
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      CGGCATTGAGGATACAAACCCTTCATATCCGTATCTTCCTACTGTTCTTGAGGAGCCTGG 1500
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      ATCTTCTTTCTCTGAAGCTGCTGAGGATGATCCACTGCCAGGCATAGAGGGCCTTCGAAT 1560
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      CACAGGTGAAGCTTTTCCTGGAAGAGAACTCCAAGCAAGCGGGTACTCCACCAATGGAAC 1620
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      CACCAGTTGTAATTTTGAGTGGGTGCGCCATTTAGAAGATGGCTCCGTAAATTTCATAGA 1680
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      AGGAGCAAGACAACCTAACTATTTGGTTACTGCCGATGACGTGGACACATTACTAGCTAT 1740
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      TGAAGTACAGCCCCTTGGTGATAGAAAAAGAAAGGGGGAAATTGTAAGGTTTTACGCTAA 1800
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      TGATCAAAGAAAAATTACTTGCGATCCTGAAACAAAGGAGCTTATTAAGAGAACTCTTGA 1860
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      AACTGGTCATGTATCTTATGAAGTCCAACTACCTCAGGTGAAATTTTTAGATATGTGGGA 1920
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      ACCAGCTATTTTGGCAATAAAGAGGGAAGGCTACAGTATTAAATGTACTGGTCAGCGTGG 1980
consensus_11740#1      ------------------------------------------------------------
                                                                                   

consensus_11740#0      TGTTGTTCTCACAGAGAAATTTCAGCAAGCAACTTCTATTAATATTCCTTACGGGCGTCC 2040
consensus_11740#1      -------------------------------------------------------GTTCC 5
                                                                                ***

consensus_11740#0      GACAGAGTTCTTGATTACATCTGCTGATGGTGTTGAATATAATTTAAAGCCTGCAGAAAA 2100
consensus_11740#1      GACAGAGTTCTNGATTACATCTGCTGATGGTGTTTGATATAATTTAAA-CCTGCAGAAGA 64
                       *********** **********************  ************ ********* *

consensus_11740#0      TGCAC-TGCCGCGGGATACCATTGTTCTGGTTTTAAGATTGTTCAGAATTATGGC-TGTT 2158
consensus_11740#1      TGCACCTGCCGCGGGATACCATTGTTCTGGTTTTAAGATTGTTCAGAATTATGGCCTGTT 124
                       ***** ************************************************* ****

consensus_11740#0      GAGAAGAGGAGAGGAAGAAAGAAGAGCCTTTTCTTCAAGTAGGTTT-GGCTCCTATACCG 2217
consensus_11740#1      GAGAAGAGGAGAGGAAGAAAGAAAGACCTTTTCTTCAAGTAGGTTTTGGCTCCTATACCG 184
                       ***********************   ******************** *************

consensus_11740#0      TGGTGTATAATTTGTATTCGTGATTGGCTGGATGTATGTAATTAAGCGGGTGATAGGTTT 2277
consensus_11740#1      TGGTGTATAATTTGTATTCGTGATTGGCTGGATGTATGTAATTAAGCGGGTGATAGGTTT 244
                       ************************************************************

consensus_11740#0      GGCATATTCTTTCGGCTGTATCTTCTGCTGTAAAGGACCATAGGCGATTTAAACACAAGG 2337
consensus_11740#1      GGCATATTCTTTCGGCTGTATCTTCTGCTGTAAAGGACCATAGGCGATTTAAACACAAGG 304
                       ************************************************************

consensus_11740#0      GCCCCAGGTGATGGGAGTTTTCTTCTTCTTATTTTTTTCCCTTATTCCTTTTAGAAACAT 2397
consensus_11740#1      GCCCCAGGTGATGGGAGTTTTCTTCTTCTTATTTTTTTCCCTTATTCCTTTTAGAAACAT 364
                       ************************************************************

consensus_11740#0      GAGTTTTGTCGTTGCAAGGGATGGAAGCGTGCCGCTGATTAGAATTGAAGCTAATTTAGG 2457
consensus_11740#1      GAGTTT-GTCGTTGCAAGGGATGGAAGCGTGCCGCTGATTAGAATTGAAGCTAATTTATG 423
                       ****** *************************************************** *

consensus_11740#0      CTAATAGAATGGAAAAGATAAATAGGCAACAAAAAAAAGG-------------------- 2497
consensus_11740#1      CTAATAGAATGGAAAAGATAAATAGGCAAGTCCTAGGATGCTCTGGAAATATTCCCTGCA 483
                       *****************************     *  * *                    

consensus_11740#0      ------------------------------------------------------------
consensus_11740#1      TCGTAGGGTAGTGACCATCATCAGTTCACGGGTGACCTCCCTGCCTGCTGGTTACTTCCA 543
                                                                                   

consensus_11740#0      ------------------------------------------------------------
consensus_11740#1      ACGAGCTTGCAATTTTGGAGATGACGCATAGCAGTACCTGAACATGTATACAAGTATAAC 603
                                                                                   

consensus_11740#0      ------------------------------------------------------------
consensus_11740#1      TGATGTATCATATGCTGTGTAATTAAAAAAGACGAAATAGACTTCAGTAATTTAAGAAAA 663
                                                                                   

consensus_11740#0      -
consensus_11740#1      A 664