cluster # 8345

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Oryza sativa
cluster # 8345 cluster # 8345 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8345#0 length = 1886 sequences # 5
consensusID : consensus_8345#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1886
fasta sequence
                              [CTAGGGCACTACTCGCCGCCGCAGGCGGCCGCGGGGGACGGGGGAGCGCCTCCGTGTCCCGGGTGCCCGCGCCGCGCAGAGGGGGCTCACATGGCTGGAAGGAAGGAAAATCCGGTGCTTACTGCTTGCCAAGCACCCAGTGGTCGAATCACACGAGCTCAAGCTGCTGCAAATCGTGGACGGTTTGGGTTTGCTCCCTCCGTATCACTACCCGCAAGAACTGAACGAAAGCAGACAGCAAAAGGAAAGACAAAAAGGGGAGCTTTGGATGAAATCACTAGTGCAAGTACTGCAACTTCAGCTCCTCAGCCTAAACGGCGCACAGTGCTCAAGGATGTAACCAACATCGGCTGTGCCAACTCATCCAAAAATTGCACCACCACGAGCAAGCTGCAGCAAAAGTCAAAGCCCACCCAAAGGGTGAAACAAATCCCGAGCAAAAAGCAGTGTGCAATGAAGGTTCCTAAGCTACCCCCTCCGGCTGTTGCTGGAACTTCATTTGTGATTGATTCTAAAAGTTCTGAAGAAACTCAAAAGGTGGAGCTTTTGGCAAAAGCAGAGGAACCCACAAATTTGTTTGAAAACGAGGGGTTACTGTCATTGCAGAATATTGAGCGAGACAGGGACAGTAATTGCCATGAGGCATTCTTTGAGGCAAGAAACGCCATGGATAAACATGAACTCGCTGACTCCAAGCCTGGTGACTCTAGTGGTTTAGGTTTTATAGATATTGACAATGATAATGGAAATCCTCAAATGTGTGCTTCCTATGCTTCAGAGATATACACAAATCTGATGGCCTCTGAGCTTATCAGAAGACCCAGGTCAAATTACATGGAGGTTTTGCAACGTGACATCACAAAGGGCATGCGAGGCATTCTCATTGATTGGCTTGTTGAGGTTTCTGAAGAATATAAGCTTGTGCCAGACACACTCTACCTAACCATTAATCTTATTGACCGATTTCTTTCTCAACATTATATTGAAAGACAGAAACTCCAACTTCTTGGAATAACAAGCATGCTGATTGCCTCGAAATATGAAGAGATATGTGCTCCTCGTGCTGAAGAATTTTGTTTCATAACTGACAATACATACACAAAAGCTGAGGTGCTGAAAATGGAGGGCCTGGTGCTTAATGATCTGGGGTTTCATCTATCTGTTCCAACAACAAAAACATTTCTCAGGAGATTCCTTAGAGCCGCACAGGCTTCTCGTAATGTTCCTTCAATTACCTTGGGATATCTGGCCAATTATCTTGCAGAGCTGACCCTGATCGATTACAGTTTCCTCAAATTTCTTCCTTCAGTGGTGGCAGCATCTGCAGTCTTTCTTGCAAGATGGACACTTGACCAATCTGACATTCCATGGAATCATACTCTTGAGCACTACACTTCTTACAAAAGCTCTGATATTCAAATATGTGTCTGTGCTCTACGGGAACTGCAGCATAACACCAGTAATTGCCCTCTCAATGCTATACGTGAAAAGTATAGGCAACAAAAGTTTGAGTGTGTAGCCAACCTGACATCACCGGAGCTGGGGCAGTCACTCTTCAGCTGACAAAGGCAATGGTATCA-GTTTCCTGTTAATCAACAACCGTTAGCAGCAGTCATTACCATGACTGCTTTCTGATTTGTTGTGTTGTCCTGAAGTGTTGTTTCCCGACCATTTTAGAGTCGTGCAGTAAAAAAAAAAGAAAAAGAAAAGGAGAGATAGCTTGCATTTGTTTGACCTTAAGTATGCCTTTAGTTGATAATTGTAAGAAAACACTCACTGTGTGTAGGCTGCCGCCTTTGGGTTGATAATTGTAAGATGATCCTGCTTGTATAACAAATGGTTGCTTGGTTTGACCGAGATTATGTTATTCCGTTATTAGAAAAAAA]

[+] EMBL AK106653             [CTAGGGCACTACTCGCCGCCGCAGGCGGCCGCGGGGGACGGGGGAGCGCCTCCGTGTCCCGGGTGCCCGCGCCGCGCAGAGGGGGCTCACATGGCTGGAAGGAAGGAAAATCCGGTGCTTACTGCTTGCCAAGCACCCAGTGGTCGAATCACACGAGCTCAAGCTGCTGCAAATCGTGGACGGTTTGGGTTTGCTCCCTCCGTATCACTACCCGCAAGAACTGAACGAAAGCAGACAGCAAAAGGAAAGACAAAAAGGGGAGCTTTGGATGAAATCACTAGTGCAAGTACTGCAACTTCAGCTCCTCAGCCTAAACGGCGCACAGTGCTCAAGGATGTAACCAACATCGGCTGTGCCAACTCATCCAAAAATTGCACCACCACGAGCAAGCTGCAGCAAAAGTCAAAGCCCACCCAAAGGGTGAAACAAATCCCGAGCAAAAAGCAGTGTGCAATGAAGGTTCCTAAGCTACCCCCTCCGGCTGTTGCTGGAACTTCATTTGTGATTGATTCTAAAAGTTCTGAAGAAACTCAAAAGGTGGAGCTTTTGGCAAAAGCAGAGGAACCCACAAATTTGTTTGAAAACGAGGGGTTACTGTCATTGCAGAATATTGAGCGAGACAGGGACAGTAATTGCCATGAGGCATTCTTTGAGGCAAGAAACGCCATGGATAAACATGAACTCGCTGACTCCAAGCCTGGTGACTCTAGTGGTTTAGGTTTTATAGATATTGACAATGATAATGGAAATCCTCAAATGTGTGCTTCCTATGCTTCAGAGATATACACAAATCTGATGGCCTCTGAGCTTATCAGAAGACCCAGGTCAAATTACATGGAGGTTTTGCAACGTGACATCACAAAGGGCATGCGAGGCATTCTCATTGATTGGCTTGTTGAGGTTTCTGAAGAATATAAGCTTGTGCCAGACACACTCTACCTAACCATTAATCTTATTGACCGATTTCTTTCTCAACATTATATTGAAAGACAGAAACTCCAACTTCTTGGAATAACAAGCATGCTGATTGCCTCGAAATATGAAGAGATATGTGCTCCTCGTGTTGAAGAATTTTGTTTCATAACTGACAATACATACACAAAAGCTGAGGTGCTGAAAATGGAGGGCCTGGTGCTTAATGATATGGGGTTTCATCTATCTGTTCCAACAACAAAAACATTTCTCAGGAGATTCCTTAGAGCCGCACAGGCTTCTCGTAATGTTCCTTCAATTACCTTGGGATATCTGGCCAATTATCTTGCAGAGCTGACCCTGATCGATTACAGTTTCCTCAAATTTCTTCCTTCAGTGGTGGCAGCATCTGCAGTCTTTCTTGCAAGATGGACACTTGACCAATCTGACATTCCATGGAATCATACTCTTGAGCACTACACTTCTTACAAAAGCTCTGATATTCAAATATGTGTCTGTGCTCTACGGGAACTGCAGCATAACACCAGTAATTGCCCTCTCAATGCTATACGTGAAAAGTATAGGCAACAAAAGTTTGAGTGTGTAGCCAACCTGACATCACCGGAGCTGGGGCAGTCACTCTTCAGCTGACAAAGGCAATGGTATCA GTTTCCTGTTAATCAACAACCGTTAGCAGCAGTCATTACCATGACTGCTTTCTGATTTGTTGTGTTGTCCTGAAGTGTTGTTTCCCGACCATTTTAGAGTCGTGCAGTAAAAAAAAAAGAAAAAGAAAAGGAGAGATAGCTTGCATTTGTTTGACCTTAAGTATGCCTTTAGTTGATAATTGTAAGAAAACACTCACTGTGTGTAGGCTGCCGCCTTTGGGTTGATAATTGTAAGATGATCCTGCTTGTATAACAAATGGTTGCTTGGTTTGACCG                              ]
[+] EMBL CA765339             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCATTCTCATTGATTGGCTTGTTGAGGTTTCTGAAGAATATAAGCTTGTGCCAGACACACTCTACCTAACCATTAATCTTATTGACCGATTTCTTTCTCAACATTATATTGAAAGACAGAAACTCCAACTTCTTGGAATAACAAGCATGCTGATTGCCTCGAAATATGAAGAGATATGTGCTCCTCGTGCTGAAGAATTTTGTTTCATAACTGACAATACATACACAAAAGCTGAGGTGCTGAAAATGGAGGGCCTGGTGCTTAATGATCTGGGGTTTCATCTATCTGTTCCAACAACAAAAACATTTCTCAGGAGATTCCTTAGAGCCGCACAGGCTTCTCGTAATGTTCCTTCAATTACCTTGGGATATCTGGCCAATTATCTTGCAGAGCTGACCCTGATCGATTACAGTTTCCTCAAATTTCTTCCTTCAGTGGTGGCAGCATCTGCAGTCTTTCTTGCAAGATGGACACTTGACCAATCTGACATTCCATGGAATCATACTCTTGAGCACTACACTTCTTACAAAAGCTCTGATATTCAAATATGTGTCTGTGCTCTACGGGAACTGCAGCATAACACCAGTAATTGCCCTCTCAATGCTATACGTGAAAAGTATAGGCAACAAAAGNTTGAGTGTGTAGCCAACCTGACATCACCGGAGCTGGGGCAGTCACTCTTCAGCTGACAAAGGCAATGGTATCAGGTTTCCTGGTAATCAACAACCGNTAGCAGCAGTCATTACCATGAC                                                                                                                                                                                                                                                                     ]
[-] EMBL CA759858             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TAACAAGCATGCTGATTGCCTCGAAATATGAAGAGATATGTGCTCCTCGTGCTGAAGAATTTTGTTTCATAACTGNCGATACATACACAAAAGNTGAGGTGCTGAAAATGGAGGGCCTGGTGTTTAATGATCTGGGGTTTCATCTATCTGTTCCAACAACAAAAACATTTCTCAGGAGATTCCTTAGAGCCGCACAGGCTTCTCGTAATGTTCCTTCAATTACCTTGGGATATCTGGCCAATTATCTTGCAGAGCTGACCCTGATCGATTACAGTTTCCTCAAATTTCTTCCTTCAGTGGTGGCAGCATCTGCAGTCTTTCTTGCAAGATGGACACTTGACCAATCTGACATTCCATGGAATCATACTCTTGAGCACTACACTTTTTACAAAAGCTCTGATATTCAAATATGTGTCTGTGCTCTACGGGAACTGCAGCATAACACCAGTAATTGCCCTCTCAATGCTATACGTGAAAAGTATAGGCAACAAAAGTTTGAGTGTGTAGCCAACCTGACATCACCGGAGCTGGGGCAGTCACTCTTCAGCTGACAAAGGCAATGGTATCA GTTTCCTGTTAATCAACAACCGTTAGCAGCAGTCATTACCATGACTGCTTTTTGATTTGTTGTGTTGTCCTGAAGTGTTGTTTCCCGACCATTTTAGAGTCGTGCAGTAAAAAAAAAAAAAAAAa                                                                                                                                                                                     ]
[+] EMBL AU085810             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGCAGCAGTCATTACCATGACTGCTTTCTGATTTGTTGTGTTGTCCTGAAGTGTTGTTTCCCGACCATTTTAGAGTCGTGCAGTAAAAAAAAAAGAANAAGAAAAGGAGAGATAGCTTGCATTTGTTTGACCTTAAGTATGCCTTTAGTTGATAATTGTAAGAAAACACTCACTGTGTGTAGGCTGCCGCCTTTGGGTTGATAATTGTAAGATGATCCTGCTTGTATAACAAATGGTTGCTTGGTTTGACCGAGATTATGTTATTCCGTTATTAGAAAAAAA]
[+] EMBL C28020               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    nAGCAGCAGTCATTCACATGNNTGCTTTCTNATTTNTNGTGTTGTCCTGAAGTGTTGTTTCCCGACCATTTTAGAGTCGTGCAGTAAAAAAAAAAGAAAAAGAAAAGGAGAGATAGCTTGCATTTTTTTGACCTTAAGTATGCCTTTAGTTGATAATTGTAAGAAAACACTCACTGTGTGTAGGCTGCCGCCTTTGGGTTGATAATTGTAAGATGATCCTGCTTGTATAACAAATGGTTG                                           ]




>consensus_8345#0
CTAGGGCACTACTCGCCGCCGCAGGCGGCCGCGGGGGACGGGGGAGCGCCTCCGTGTCCC
GGGTGCCCGCGCCGCGCAGAGGGGGCTCACATGGCTGGAAGGAAGGAAAATCCGGTGCTT
ACTGCTTGCCAAGCACCCAGTGGTCGAATCACACGAGCTCAAGCTGCTGCAAATCGTGGA
CGGTTTGGGTTTGCTCCCTCCGTATCACTACCCGCAAGAACTGAACGAAAGCAGACAGCA
AAAGGAAAGACAAAAAGGGGAGCTTTGGATGAAATCACTAGTGCAAGTACTGCAACTTCA
GCTCCTCAGCCTAAACGGCGCACAGTGCTCAAGGATGTAACCAACATCGGCTGTGCCAAC
TCATCCAAAAATTGCACCACCACGAGCAAGCTGCAGCAAAAGTCAAAGCCCACCCAAAGG
GTGAAACAAATCCCGAGCAAAAAGCAGTGTGCAATGAAGGTTCCTAAGCTACCCCCTCCG
GCTGTTGCTGGAACTTCATTTGTGATTGATTCTAAAAGTTCTGAAGAAACTCAAAAGGTG
GAGCTTTTGGCAAAAGCAGAGGAACCCACAAATTTGTTTGAAAACGAGGGGTTACTGTCA
TTGCAGAATATTGAGCGAGACAGGGACAGTAATTGCCATGAGGCATTCTTTGAGGCAAGA
AACGCCATGGATAAACATGAACTCGCTGACTCCAAGCCTGGTGACTCTAGTGGTTTAGGT
TTTATAGATATTGACAATGATAATGGAAATCCTCAAATGTGTGCTTCCTATGCTTCAGAG
ATATACACAAATCTGATGGCCTCTGAGCTTATCAGAAGACCCAGGTCAAATTACATGGAG
GTTTTGCAACGTGACATCACAAAGGGCATGCGAGGCATTCTCATTGATTGGCTTGTTGAG
GTTTCTGAAGAATATAAGCTTGTGCCAGACACACTCTACCTAACCATTAATCTTATTGAC
CGATTTCTTTCTCAACATTATATTGAAAGACAGAAACTCCAACTTCTTGGAATAACAAGC
ATGCTGATTGCCTCGAAATATGAAGAGATATGTGCTCCTCGTGCTGAAGAATTTTGTTTC
ATAACTGACAATACATACACAAAAGCTGAGGTGCTGAAAATGGAGGGCCTGGTGCTTAAT
GATCTGGGGTTTCATCTATCTGTTCCAACAACAAAAACATTTCTCAGGAGATTCCTTAGA
GCCGCACAGGCTTCTCGTAATGTTCCTTCAATTACCTTGGGATATCTGGCCAATTATCTT
GCAGAGCTGACCCTGATCGATTACAGTTTCCTCAAATTTCTTCCTTCAGTGGTGGCAGCA
TCTGCAGTCTTTCTTGCAAGATGGACACTTGACCAATCTGACATTCCATGGAATCATACT
CTTGAGCACTACACTTCTTACAAAAGCTCTGATATTCAAATATGTGTCTGTGCTCTACGG
GAACTGCAGCATAACACCAGTAATTGCCCTCTCAATGCTATACGTGAAAAGTATAGGCAA
CAAAAGTTTGAGTGTGTAGCCAACCTGACATCACCGGAGCTGGGGCAGTCACTCTTCAGC
TGACAAAGGCAATGGTATCAGTTTCCTGTTAATCAACAACCGTTAGCAGCAGTCATTACC
ATGACTGCTTTCTGATTTGTTGTGTTGTCCTGAAGTGTTGTTTCCCGACCATTTTAGAGT
CGTGCAGTAAAAAAAAAAGAAAAAGAAAAGGAGAGATAGCTTGCATTTGTTTGACCTTAA
GTATGCCTTTAGTTGATAATTGTAAGAAAACACTCACTGTGTGTAGGCTGCCGCCTTTGG
GTTGATAATTGTAAGATGATCCTGCTTGTATAACAAATGGTTGCTTGGTTTGACCGAGAT
TATGTTATTCCGTTATTAGAAAAAAA
clustalw multiple alignements is not computed in this case