cluster # 10011

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Schistosoma mansoni
cluster # 10011 cluster # 10011 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10011#0 length = 1157 sequences # 2
consensus_10011#1 length = 940 sequences # 6

consensus_10011#2 length = 494 sequences # 4
consensus_10011#3 length = 171 sequences # 1

consensusID : consensus_10011#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1157
fasta sequence

                              [GCCAGAATTTGGCACGAGGGACTGTATCCAGTAGTTATTGCTGTTGTTGTGTGCTTTGTAACTGTTATACTGTATTGGTTGTCAGTCAGAAAGAGACTTAAAAACGTGTTGTTTATTGGTGCTTGTGATTCAGGGAAAACAACTCTTTTCTCATCTATTGTATATGGAAATCCATCTTCCACTTTTACATCTCTCAATGAGAATGTTGGAAATCTACAAATAGATAAAAAGGCTCTTGTTCTTGTAGATGTTCCTGGTCATGATAAAGTTCGAAACGAGATAATTCACAAATATAAATTGGAGACTTTGGCATTGGTATTTGTCATAGATTCAAAGTCTATTCAGAGTGACGTAAAAGATGTTGCTGAGTTTTTGTACAATATACTTGTGGATAAGGTCTTTATAAAGAATCGCGTAAAATTACTAGTAGCTTGTAATAAACAAGATGCTACCACGGCAAAAGGTGTCAGTGTAGTAACTCATTTACTTGAAAAAGAATTGTCTAGAAAGTTGCGATAAAGATGACAGAAAATCACGTGCTGAGTTTCACTTGTCGCCAATGGACGTAGTTCGACAGTTTATTCACATAAAGCTTCATTTAAGTTGTCTGGGAATACTCTTACGTTTACACGTACTGGTGCGCTTGCTGGCCTCGATCAGTCCACCATATCAACACTGANNCAGGCCGGGAGTGACCTTCACTTTTGCAAAAAGTCGTTTACCGGTGGATTTCGTCGAAATTTCTGCTACAAATAATGCTTCTGCAATTCATAAGTGGCTTGTGCAACTATAAGTTTGTGAGAAAACTTACTGTTCTTGTATTAAAAGATACCTGAGGTTTCCTCTTGTTGTTAATACATTTTGTCAACATTATGCTTCCTGTGAATATGTTGTAATTTCACTTCACCATTCCGTTAAATATTCATGAGTACTATCTGTCGTTCAGATTACTTACGGATAATATATATTCTTTTAATGGTTCACAGTGAACTGCTACGTTGACATTTTGTAGAATAAATATCACTAACATAACTAGATTGCTAATTCGCAAGAAAACTAGTATATGATTGCTATTATAAAGTGTAGATCACGCTTTATCAGCAGAATGCATGCAACTGGTACCGATATTGTTGACTAAATTTCCAGAATAATAGATT]

[+] EMBL CD079610             [GCCAGAATTTGGCACGAGGGACTGTATCCAGTAGTTATTGCTGTTGTTGTGTGCTTTGTAACTGTTATACTGTATTGGTTGTCAGTCAGAAAGAGACTTAAAAACGTGTTGTTTATTGGTGCTTGTGATTCAGGGAAAACAACTCTTTTCTCATCTATTGTATATGGAAATCCATCTTCCACTTTTACATCTCTCAATGAGAATGTTGGAAATCTACAAATAGATAAAAAGGCTCTTGTTCTTGTAGATGTTCCTGGTCATGATAAAGTTCGAAACGAGATAATTCACAAATATAAATTGGAGACTTTGGCATTGGTATTTGTCATAGATTCAAAGTCTATTCAGAGTGACGTAAAAGATGTTGCTGAGTTTTTGTACAATATACTTGTGGATAAGGTCTTTATAAAGAATCGCGTAAAATTACTAGTAGCTTGTAATAAACAAGATGCTACCACGGCAAAAGGTGTCAGTGTAGTAACTCATTTACTTGAAAAAGAATTGTCTAGAAAGTTGCGATAAAGATGACAGAAAATCACGTGCTGAGTTTCACTTGTCGCCAATGGACGTAGTTCGACAGTTTATTCACATAAAGCTTCATTTAAGTTGTCTGGGAATACTCTTACGTTTACACGTACTGGTGCGCTTGCTGGCCTCGATCAGTCCACCATATCAACACTGANNCAGGCCGGGAGTGACCTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD073872             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACTCATTTAC TGAAAAAGAATTGTCTAGAAAGTTGCGATAAAGATGACAGAAAATCACGTGCTGAGTTTCACTTGTCGCCAATGGACGTAGTTCGACAGTTTATTCACATAAAGCTTCATTTAAGTTGTCTGGGAATACTCTTACGTTTACACGTACTGGTGCGCTTGCTGGCCTCGATCAGTCCACCATATCAACACTGA CAAGGCCGGGAGTGACCTTCACTTTTGCAAAAAGTCGTTTACCGGTGGATTTCGTCGAAATTTCTGCTACAAATAATGCTTCTGCAATTCATAAGTGGCTTGTGCAACTATAAGTTTGTGAGAAAACTTACTGTTCTTGTATTAAAAGATACCTGAGGTTTCCTCTTGTTGTTAATACATTTTGTCAACATTATGCTTCCTGTGAATATGTTGTAATTTCACTTCACCATTCCGTTAAATATTCATGAGTACTATCTGTCGTTCAGATTACTTACGGATAATATATATTCTTTTAATGGTTCACAGTGAACTGCTACGTTGACATTTTGTAGAATAAATATCACTAACATAACTAGATTGCTAATTCGCAAGAAAACTAGTATATGATTGCTATTATAAAGTGTAGATCACGCTTTATCAGCAGAATGCATGCAACTGGTACCGATATTGTTGACTAAATTTCCAGAATAATAGATT]




>consensus_10011#0
GCCAGAATTTGGCACGAGGGACTGTATCCAGTAGTTATTGCTGTTGTTGTGTGCTTTGTA
ACTGTTATACTGTATTGGTTGTCAGTCAGAAAGAGACTTAAAAACGTGTTGTTTATTGGT
GCTTGTGATTCAGGGAAAACAACTCTTTTCTCATCTATTGTATATGGAAATCCATCTTCC
ACTTTTACATCTCTCAATGAGAATGTTGGAAATCTACAAATAGATAAAAAGGCTCTTGTT
CTTGTAGATGTTCCTGGTCATGATAAAGTTCGAAACGAGATAATTCACAAATATAAATTG
GAGACTTTGGCATTGGTATTTGTCATAGATTCAAAGTCTATTCAGAGTGACGTAAAAGAT
GTTGCTGAGTTTTTGTACAATATACTTGTGGATAAGGTCTTTATAAAGAATCGCGTAAAA
TTACTAGTAGCTTGTAATAAACAAGATGCTACCACGGCAAAAGGTGTCAGTGTAGTAACT
CATTTACTTGAAAAAGAATTGTCTAGAAAGTTGCGATAAAGATGACAGAAAATCACGTGC
TGAGTTTCACTTGTCGCCAATGGACGTAGTTCGACAGTTTATTCACATAAAGCTTCATTT
AAGTTGTCTGGGAATACTCTTACGTTTACACGTACTGGTGCGCTTGCTGGCCTCGATCAG
TCCACCATATCAACACTGANNCAGGCCGGGAGTGACCTTCACTTTTGCAAAAAGTCGTTT
ACCGGTGGATTTCGTCGAAATTTCTGCTACAAATAATGCTTCTGCAATTCATAAGTGGCT
TGTGCAACTATAAGTTTGTGAGAAAACTTACTGTTCTTGTATTAAAAGATACCTGAGGTT
TCCTCTTGTTGTTAATACATTTTGTCAACATTATGCTTCCTGTGAATATGTTGTAATTTC
ACTTCACCATTCCGTTAAATATTCATGAGTACTATCTGTCGTTCAGATTACTTACGGATA
ATATATATTCTTTTAATGGTTCACAGTGAACTGCTACGTTGACATTTTGTAGAATAAATA
TCACTAACATAACTAGATTGCTAATTCGCAAGAAAACTAGTATATGATTGCTATTATAAA
GTGTAGATCACGCTTTATCAGCAGAATGCATGCAACTGGTACCGATATTGTTGACTAAAT
TTCCAGAATAATAGATT

consensusID : consensus_10011#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 940
fasta sequence

                              [TCCGAGGCCANAATTCGGCACGAGGTCCGTTATGGATATTTTGTTGTATCCAGTAGTTATTGCTGTTGTTGTGTGCTTTGTAACTGTTATACTGTATTGGTTGTCAGTCAGAAAGAGACTTAAAAACGTGTTGTTTATTGGTGCTTGTGATTCAGGGAAAACAACTCTTTTCTCATCTATTGTATATGGAAATCCATCTTCCACTTTTACATCTCTCAATGAGAATGTTGGAAATCTACAAATAGATAAAAAGGCTCTTGTTCTTGTAGATGTTCCTGGTCATGATAAAGTTCGAAACGAGATAATTCACAAATATAAATTGGAGACTTTGTATGTCTTGACCGTTACTAATTATTTTTAGGGCATTGGTATTTGTCATAGATTCAAAGTCTATTCAGAGTGACGTAAAAGATGTTGCTGAGTTTTTGTACAATATACTTGTGGATAAGGTCTTTATAAAGAATCGCGTAAAATTACTAGTAGCTTGTAATAAACAAGATGCTACCACGGCAAAAGGTGTCAGTGTAGTAACTCATTTACTTGAAAAAGAATTGAATACTCTTACGTTTACACGTACTGGTGCGCTTGCTGGCCTCGATCAGTCCACCATATCAACACTGACAAGGCCGGGAGTGACCTTCACTTTTGCAAAAAGTCGTTTACCGGTGGATTTCGTCGAAATTTCTGCTACAAATAATGCTTCTGCAATTCATAAGTGGCTTGTGC-AACTATAAGTTTGTGAGAAAACC-TACTGTTCTTGTATTAAAAGATACCTGAGGTTTCCT-CTTGTTGTTAATACATTTTGTCAACATTATGCTTCCTGTGAATATGTTGTAATTTCACTTCACCATTCCGTTAAATATTCATGAGTACTATCTGTCGTTCAGATTACTTACGGATAATATATATTCTTTTAATGGTTCAAAAAAAAAAAAAAAAA]

[+] EMBL CD081381             [TCCGAGGCCANAATTCGGCACGAGGTCCGTTATGGATATTTTGTTGTATCCAGTAGTTATTGCTGTTGTTGTGTGCTTTGTAACTGTTATACTGTATTGGTTGTCAGTCAGAAAGAGACTTAAAAACGTGTTGTTTATTGGTGCTTGTGATTCAGGGAAAACAACTCTTTTCTCATCTATTGTATATGGAAATCCATCTTCCACTTTTACATCTCTCAATGAGAATGTTGGAAATCTACAAATAGATAAAAAGGCTCTTGTTCTTGTAGATGTTCCTGGTCATGATAAAGTTCGAAACGAGATAATTCACAAATATAAATTGGAGACTTTGTATGTCTTGACCGTTACTAATTATTTTTAGGGCATTGGTATTTGTCATAGATTCAAAGTCTATTCAGAGTGACGTAAAAGATGTTGCTGAGTTTTTGTACAATATACTTGTGGATAAGGTCTTTATAAAGAATCGCGTAAAATTACTAGTAGCTTGTAATAAACAAGATGCTACCACGGCAAAAGGTGTCAGTGTAGTAACTCATTTACTTGAAAAAGAATTGAATACTTTTACGTTTACACGTACTGGTGCGCTTGCTGGCCTCGATCAGTCCACCATATCAACACTGACAAGGCCCGGAGTGACCTTCACTTTTGCAAAAAGTCGTTTACCGGTGGATTTCGTCGAAATTTCTGCTACAAAT ATGCTTCTGCAATTCATAAGTGGCTTGTGC ACCTAT AGTTTGTGAG AAACC TACTGCTCTTGTATT AAAGATACCTGAAG TTCCTCCTTG TGCTAATACAct                                                                                                                                          ]
[+] EMBL CD080669             [                            GTTATGGATATTTTGTTGTATCCAGTAGTTATTGCTGTTGTTGTGTGCTTTGTAACTGTTATACTGTATTGGTTGTCAGTCAGAAAGAGACTTAAAAACGTGTTGTTTATTGGTGCTTGTGATTCAGGGAAAACAACTCTTTTCTCATCTATTGTATATGGAAATCCATCTTCCACTTTTACATCTCTCAATGAGAATGTTGGAAATCTACAAATAGATAAAAAGGCTCTTGTTCTTGTAGATGTTCCTGGTCATGATAAAGTTCGAAACGAGATAATTCACAAATATAAATTGGAGACTTTGTATGTCTTGACCGTTACTAATTATTTTTAGGGCATTGGTATTTGTCATAGATTCAAAGTCTATTCAGAGTGACGTAAAAGATGTTGCTGAGTTTTTGTACAATATACTTGTGGATAAGGTCTTTATAAAGAATCGCGTAAAATTACTAGTAGCTTGTAATAAACAAGATGCTACCACGGCAAAAGGTGTCAGTGTAGTAACTCATTTACTTGAAAAAGAATTGAATACTCTTACGTTTACACGTACTGGTGCGCTTGCTGGCCTCGATCAGTCCACCATATCAACACTGACAAGGCCGGGAGTGACCTTCACTTTTGCAAAAAGTCGTTTACCGGTGGATTTCGTCGAAATTTCTGCT CCAATAATGCTTCTGNCATTCATAAGTGGCTTGTGCAAACTATAAG TTGTGAGAAAA C TACTGTTC TGTAT  AAAGATACCTGA GTTTCCT CT  TTGTGTATACA                                                                                                                                            ]
[-] EMBL CD074588             [                                                                                                                                                            GAAAACAACTCTTTTCTCATCTATGGTATATGGAAATCCATCTTCCACTTTTACATCTCTCAATGAGAATGTTGGAAATCTACAAATAGATAAAAAGGCTCTTGTTCTTGTAGATGTTCCTGGTCATGATAAAGTTCGAAACGAGATAATTCACAAATATAAATTGGAGACTTTGTATGTCTTGACCGTTACTAATTATTTTTAGGGCATTGGTATTTGTCATAGATTCAAAGTCTATTCAGAGTGACGTAAAAGATGTTGCTGAGTTTTTGTACAATATACTTGTGGATAAGGTCTTTATAAAGAATCGCGTAAAATTACTAGTAGCTTGTAATAAACAAGATGCTACCACGGCAAAAGGTGTCAGTGTAGTAACTCATTTACTTGAAAAAGAATTGAATACTCTTACGTTTACACGTACTGGTGCGCTTGCTGGCCTCGATCAGTCCACCATATCAACACTGACAAGGCCGGGAGTGACCTTCACTTTTGCAAAAAGTCGTTTACCGGTGGATTTCGTCGAAATTTCTGCTACAAATAATGCTTCTGCAATTCATAAGTGGCTTGTGC AACTATAAGTTTGTGAGAAAACT TACTGTTCTTGTATTAAAAGATACCTGAGGTTTCCT CTTGTTGATAATACATTTT                                                                                                                                        ]
[-] EMBL CD075215             [                                                                                                                                                                                       ATATGGAAATCCATCTTCCACTTTTACATCTCTCAATGAGAATGTTGGAAATCTACAAATAGATAAAAAGGCTCTTGTTCTTGTAGATGTTCCTGGTCATGATAAAGTTCGAAACGAGATAATTCACAAATATAAATTGGAGACTTTGTATGTCTTGACCGTTACTAATTATTTTTAGGGCATTGGTATTTGTCATAGATTCAAAGTCTATTCAGAGTGACGTAAAAGATGTTGCTGAGTTTTTGTACAATATACTTGTGGATAAGGTCTTTATAAAGAATCGCGTAAAATTACTAGTAGCTTGTAATAAACAAGATGCTACCACGGCAAAAGGTGTCAGTGTAGTAACTCATTTACTTGAAAAAGAATTGAATACTTTTACGTTTACACGTACTGGTGCGCTTGCTGGCCTCGATCAGTCCACCATATCAACACTGACAAGGCCGGGAGTGACCTTCACTTTTGCAAAAAGTCGTTTACCGGTGGATTTCGTCGAAATTTCTGCTACAAATAATGCTTCTGCAATTCATAAGTGGCTTGTGC AACTATAAGTTTGTGAGAAAACCTTACTGTTCTTGTATTAAAAGATACCTGAGGTTTCCT CTTGTTGTTAATACATTTTGTCAAC                                                                                                                                  ]
[-] EMBL CD076542             [                                                                                                                                                                                                                                                                                                                                                                                                            AGAGTGACGTAAAAGATGTTGCTGAGTTTTTGTACAATATACTTGTGGATAAGGTCTTTATAAAGAATCGCGTAAAATTACTAGTAGCTTGTAATAAACAAGATGCTACCACGGCAAAAGGTGTCAGTGTAGTAACTCATTTACTTGAAAAAGAATTGAATACTCTTACGTTTACACGTACTGGTGCGCTTGCTGGCCTCGATCAGTCCACCATATCAACACTGACAAGGCCGGGAGTGACCTTCACTTTTGCAAAAAGTCGTTTACCGGTGGATTTCGTCGAAATTTCTGCTACAAATAATGCTTCTGCAATTCATAAGTGGCTTGTGC AACTATAAGTTTGTGAGAAAACT TACTGTTCTTGTATTAAAAGATACCTGAGGTTTCCT CTTGTTGTTAATACATTTTGTCAACATTATGCTTCCTGTGAATATGTTGTAATTTCACTTCACCATTCCGTTAAATATTCATGAGTACTATCTGTCGTTCAGATTACTT                                              ]
[-] EMBL AI395355             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCGCTTGCTGCCCTCAATCAGTCCACCATATCAACACTGACAAGGCCGGGAGTGACCTTCACTTTTGCAAAAAGTCGTTTACCGGTGGATTTCGTCGAAATTTCTGCTACAAATAATGCTTCTGCAATTCATAAGTGGCTTGTGC AACTATAAGTTTGTGAGAAAACT TACTGTTCTTGTATTAAAAGATACCTGAGGTTTCCT CTTGTTGTTAATACATTTTGTCAACATTATGCTTCCTGTGAATATGTTGTAATTTCACTTCACCATTCCGTTAAATATTCATGAGTACTATCTGTCGTTCAGATTACTTACGGATAATATATATTCTTTTAATGGTTCAAAAAAAAAAAAAAAAA]




>consensus_10011#1
TCCGAGGCCANAATTCGGCACGAGGTCCGTTATGGATATTTTGTTGTATCCAGTAGTTAT
TGCTGTTGTTGTGTGCTTTGTAACTGTTATACTGTATTGGTTGTCAGTCAGAAAGAGACT
TAAAAACGTGTTGTTTATTGGTGCTTGTGATTCAGGGAAAACAACTCTTTTCTCATCTAT
TGTATATGGAAATCCATCTTCCACTTTTACATCTCTCAATGAGAATGTTGGAAATCTACA
AATAGATAAAAAGGCTCTTGTTCTTGTAGATGTTCCTGGTCATGATAAAGTTCGAAACGA
GATAATTCACAAATATAAATTGGAGACTTTGTATGTCTTGACCGTTACTAATTATTTTTA
GGGCATTGGTATTTGTCATAGATTCAAAGTCTATTCAGAGTGACGTAAAAGATGTTGCTG
AGTTTTTGTACAATATACTTGTGGATAAGGTCTTTATAAAGAATCGCGTAAAATTACTAG
TAGCTTGTAATAAACAAGATGCTACCACGGCAAAAGGTGTCAGTGTAGTAACTCATTTAC
TTGAAAAAGAATTGAATACTCTTACGTTTACACGTACTGGTGCGCTTGCTGGCCTCGATC
AGTCCACCATATCAACACTGACAAGGCCGGGAGTGACCTTCACTTTTGCAAAAAGTCGTT
TACCGGTGGATTTCGTCGAAATTTCTGCTACAAATAATGCTTCTGCAATTCATAAGTGGC
TTGTGCAACTATAAGTTTGTGAGAAAACCTACTGTTCTTGTATTAAAAGATACCTGAGGT
TTCCTCTTGTTGTTAATACATTTTGTCAACATTATGCTTCCTGTGAATATGTTGTAATTT
CACTTCACCATTCCGTTAAATATTCATGAGTACTATCTGTCGTTCAGATTACTTACGGAT
AATATATATTCTTTTAATGGTTCAAAAAAAAAAAAAAAAA

consensusID : consensus_10011#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 494
fasta sequence

                              [GTGTGCTTTGTAACTGTTATACTGTATTGGTTGTCAGTCAGAAAGAGACTTAAAAACGTGTTGTTTATTGGTGCTTGTGATTCAGGGAAAACAACTCTTTTCTCATCTATTGTATATGGAAATCCATCTTCCACTTTTACATCTCTCAATGAGAATGTTGGAAATCTACAAATAGATAAAAAGGCTCTTGTTCTTGTAGATGTTCCTGGTCATGATAAAGTTCGAAACGAGATAATTCACAAATATAAATTGGAGACTTTGGCATTGGTATTTGTCATAGATTCAAAGTCTATTCAGAGTGACGTAAAAGATGTTGCTGAGTTTTTGTACAATATACTTGTGGATAAGGTCTTTATAAAGAATCGCGTAAAATTACTAGTAGCTTGTAATAAACAAGATGCTACCACGGCAAAAGGTGTCAGTGTAGTAACTCATTTACTTGAAAAAGATTGAATACTCTTACGTTTACACGTACTGGTGCGCTTGCTGGCCTC]

[+] EMBL CD082959             [GTGTGCTTTGTAACTGTTATACTGTATTGGTTGTCAGTCAGAAAGAGACTTAAAAACGTGTTGTTTATTGGTGCTTGTGATTCAGGGAAAACAACTCTTTTCTCATCTATTGTATATGGAAATCCATCTTCCACTTTTACATCTCTCAATGAGAATGTTGGAAATCTACAAATAGATAAAAAGGCTCTTGTTCTTGTAGATGTTCCTGGTCATGATAAAGTTCGAAACGAGATAATTCACAAATATAAATTGGAGACTTTGGCATTGGTATTTGTCATAGATTCAAAGTCTATTCAGAGTGACGTAAAAGATGTTGCTGAGTTTTTGTACAATATACTTGTGGATAAGGTCTTTATAAAGAATCGCGTAAAATTACTAGTAGCTTGTAATAAACAAGATGCTACCACGGCAAAAGGTGTCAGTGTAGTAACTCATTTACTTGAAAAAGATTGAATACTCTTACGTTTACACGTACTGGTGCGCTTGCTGGCCTC]
[-] EMBL CD162708             [                                            GAGACTTAAAAACGTGTTGTTTATTGGTGCTTGTGATTCAGGGAAAACAACTCTTTTCTCATCTATTGTATATGGAAATCCATCTTCCACTTTTACATCTCTCAATGAGAATGTTGGAAATCTACAAATAGATAAAAAGGCTCTTGTTCTTGTAGATGTTCCTGGTCATGATAAAGTTCGAAACGAGATAATTCACAAATATAAATTGGAGACTTTGGCATTGGTATTTGTCATAGATTCAAAGTCTATTCAGAGTGACGTAAAAGATGTTGCTGAGTTTTTG                                                                                                                                                                       ]
[-] EMBL CD162999             [                                            GAGACTTAAAAACGTGTTGTTTATTGGTGCTTGTGATTCAGGGAAAACAACTCTTTTCTCATCTATTGTATATGGAAATCCATCTTCCACTTTTACATCTCTCAATGAGAATGTTGGAAATCTACAAATAGATAAAAAGGCTCTTGTTCTTGTAGATGTTCCTGGTCATGATAAAGTTCGAAACGAGATAATTCACAAATATAAATTGGAGACTTTGGCATTGGTATTTGTCATAGATTCAAAGTCTATTCAGAGTGACGTAAAAGATGTTGCTGAGTTTTTG                                                                                                                                                                       ]
[-] EMBL CD163015             [                                            GAGACTTAAAAACGTGTTGTTTATTGGTGCTTGTGATTCAGGGAAAACAACTCTTTTCTCATCTATTGTATATGGAAATCCATCTTCCACTTTTACATCTCTCAATGAGAATGTTGGAAATCTACAAATAGATAAAAAGGCTCTTGTTCTTGTAGATGTTCCTGGTCATGATAAAGTTCGAAACGAGATAATTCACAAATATAAATTGGAGACTTTGGCATTGGTATTTGTCATAGATTCAAAGTCTATTCAGAGTGACGTAAAAGATGTTGCTGAGTTTTTG                                                                                                                                                                       ]




>consensus_10011#2
GTGTGCTTTGTAACTGTTATACTGTATTGGTTGTCAGTCAGAAAGAGACTTAAAAACGTG
TTGTTTATTGGTGCTTGTGATTCAGGGAAAACAACTCTTTTCTCATCTATTGTATATGGA
AATCCATCTTCCACTTTTACATCTCTCAATGAGAATGTTGGAAATCTACAAATAGATAAA
AAGGCTCTTGTTCTTGTAGATGTTCCTGGTCATGATAAAGTTCGAAACGAGATAATTCAC
AAATATAAATTGGAGACTTTGGCATTGGTATTTGTCATAGATTCAAAGTCTATTCAGAGT
GACGTAAAAGATGTTGCTGAGTTTTTGTACAATATACTTGTGGATAAGGTCTTTATAAAG
AATCGCGTAAAATTACTAGTAGCTTGTAATAAACAAGATGCTACCACGGCAAAAGGTGTC
AGTGTAGTAACTCATTTACTTGAAAAAGATTGAATACTCTTACGTTTACACGTACTGGTG
CGCTTGCTGGCCTC

consensusID : consensus_10011#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 171
fasta sequence

                              [GGTACCTGGGGGTTCCTTTTGGTGGTAAAAAAATTTGTTCAAAATATGCTTCCCGTGGATATGTTGTTATTTCAATTTCACCATTCCGTTAATATTTCATGAGTACTATCTGTCGTTCAGATTACTTACGGATAATATATATTCTTTTAATGGTTCAANNNNNNNNNNNNN]

[-] EMBL AI394794             [GGTACCTGGGGGTTCCTTTTGGTGGTAAAAAAATTTGTTCAAAATATGCTTCCCGTGGATATGTTGTTATTTCAATTTCACCATTCCGTTAATATTTCATGAGTACTATCTGTCGTTCAGATTACTTACGGATAATATATATTCTTTTAATGGTTCAANNNNNNNNNNNNN]




>consensus_10011#3
GGTACCTGGGGGTTCCTTTTGGTGGTAAAAAAATTTGTTCAAAATATGCTTCCCGTGGAT
ATGTTGTTATTTCAATTTCACCATTCCGTTAATATTTCATGAGTACTATCTGTCGTTCAG
ATTACTTACGGATAATATATATTCTTTTAATGGTTCAANNNNNNNNNNNNN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10011#0      GCCAGAATTTGGCACGAGGGACTGTATCCAGTAGTTATTGCTGTTGTTGTGTGCTTTGTA 60
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      ------------------------------------------------------------
consensus_10011#2      ------------------------------------------------------------
                                                                                   

consensus_10011#0      ACTGTTATACTGTATTGGTTGTCAGTCAGAAAGAGACTTAAAAACGTGTTGTTTATTGGT 120
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      ------------------------------------------------------------
consensus_10011#2      ------------------------------------------------------------
                                                                                   

consensus_10011#0      GCTTGTGATTCAGGGAAAACAACTCTTTTCTCATCTATTGTATATGGAAATCCATCTTCC 180
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      ------------------------------------------------------------
consensus_10011#2      ------------------------------------------------------------
                                                                                   

consensus_10011#0      ACTTTTACATCTCTCAATGAGAATGTTGGAAATCTACAAATAGATAAAAAGGCTCTTGTT 240
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      ------------------------------------------------------------
consensus_10011#2      ------------------------------------------------------------
                                                                                   

consensus_10011#0      CTTGTAGATGTTCCTGGTCATGATAAAGTTCGAAACGAGATAATTCACAAATATAAATTG 300
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      ------------------------------------------------------------
consensus_10011#2      ------------------------------------------------------------
                                                                                   

consensus_10011#0      GAGACTTTGGCATTGGTATTTGTCATAGATTCAAAGTCTATTCAGAGTGACGTAAAAGAT 360
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      ------------------------------------------------------------
consensus_10011#2      ------------------------------------------------------------
                                                                                   

consensus_10011#0      GTTGCTGAGTTTTTGTACAATATACTTGTGGATAAGGTCTTTATAAAGAATCGCGTAAAA 420
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      ------------------------------------------------------------
consensus_10011#2      ------------------------------------------------------------
                                                                                   

consensus_10011#0      TTACTAGTAGCTTGTAATAAACAAGATGCTACCACGGCAAAAGGTGTCAGTGTAGTAACT 480
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      ------------------------------------------------------------
consensus_10011#2      ------------------------------------------------------------
                                                                                   

consensus_10011#0      CATTTACTTGAAAAAGAATTGTCTAGAAAGTTGCGATAAAGATGACAGAAAATCACGTGC 540
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      ------------------------------------------------------------
consensus_10011#2      ------------------------------------------------------------
                                                                                   

consensus_10011#0      TGAGTTTCACTTGTCGCCAATGGACGTAGTTCGACAGTTTATTCACATAAAGCTTCATTT 600
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      ------------------------------------------------------------
consensus_10011#2      ------------------------------------------------------------
                                                                                   

consensus_10011#0      AAGTTGTCTGGGAATACTCTTACGTTTACACGTACTGGTGCGCTTGCTGGCCTCGATCAG 660
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      ------------------------------------------------------------
consensus_10011#2      ------------------------------------------------------------
                                                                                   

consensus_10011#0      TCCACCATATCAACACTGANNCAGGCCGGGAGTGACCTTCACTTTTGCAAAAAGTCGTTT 720
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      ------------------------------------------------------------
consensus_10011#2      ------------------------------------------------------------
                                                                                   

consensus_10011#0      ACCGGTGGATTTCGTCGAAATTTCTGCTACAAATAATGCTTCTGCAATTCATAAGTGGCT 780
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      -----------------------------TCCGAGGCCANAATTCGGCACGAGGTCCGTT 31
consensus_10011#2      ------------------------------------------------------------
                                                                                   

consensus_10011#0      TGTGCAACTATAAGTTTGTGAGAAAACTTACTGTTCTTGTATTAAAAGATACCTGAGGTT 840
consensus_10011#3      -----------------------------------------------GGTACCTGGGGGT 13
consensus_10011#1      ATGGATATTTTGTTGTATCCAGTAGTTATTGCTGTTGTTGTGTGCTTTGTAACTGTTATA 91
consensus_10011#2      ---------------------------------------GTGTGCTTTGTAACTGTTATA 21
                                                                        ** ***     

consensus_10011#0      TCCTCTTGTT----GTTAATACATTTTGTCAACATTATGCTTCCTGTGAATATGTTGTAA 896
consensus_10011#3      TCCTTTTGGT----GGTAAAAAAATTTGTTCAAAATATGCTTCCCGTGGATATGTTGTTA 69
consensus_10011#1      CTGTATTGGTTGTCAGTCAGAAAGAGACTTAAAAACGTGTTGTTTATTGGTGC-TTGTGA 150
consensus_10011#2      CTGTATTGGTTGTCAGTCAGAAAGAGACTTAAAAACGTGTTGTTTATTGGTGC-TTGTGA 80
                          * *** *      * * * *     *  * *   ** *     *   *   **** *

consensus_10011#0      TTTCA-CTTCACCATTCCGTTAAATATTCATGAGTA-------CTATCTGTCG--TTCAG 946
consensus_10011#3      TTTCAATTTCACCATTCCGTTAATATTTCATGAGTA-------CTATCTGTCG--TTCAG 120
consensus_10011#1      TTCAGGGAAAACAACTCTTTTCTCATCTATTGTATATGGAAATCCATCTTCCACTTTTAC 210
consensus_10011#2      TTCAGGGAAAACAACTCTTTTCTCATCTATTGTATATGGAAATCCATCTTCCACTTTTAC 140
                       **        ** * **  **      *  **  **       * ****  *   ** * 

consensus_10011#0      ATTACTTACGGATAATAT--ATATTCTTTTAATGGTTCACAGTGAACTGCTACGTTGACA 1004
consensus_10011#3      ATTACTTACGGATAATAT--ATATTCTTTTAATGGTTCAANNNNNNNNNNNNN------- 171
consensus_10011#1      ATCTCTCAATGAGAATGTTGGAAATCTACAAATAGATAAAAAGGCTCTTGTTCTTGTAGA 270
consensus_10011#2      ATCTCTCAATGAGAATGTTGGAAATCTACAAATAGATAAAAAGGCTCTTGTTCTTGTAGA 200
                       **  ** *  ** *** *    * ***   *** * * *                     

consensus_10011#0      TTTTGTAGAATAAATATCACTAACATAACTAGATTGCTAATTCGCAAGAAAACTAGTATA 1064
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      TGTTCCTGGTCATGATAAAGTTCGAAACGAGATAATTCACAAATATAAATTGGAGACTTT 330
consensus_10011#2      TGTTCCTGGTCATGATAAAGTTCGAAACGAGATAATTCACAAATATAAATTGGAGACTTT 260
                                                                                   

consensus_10011#0      TGATTGCTATTATAAAGTGTAGATCACGCTTTATCAGCAGAATGCATGCAACTGGTACCG 1124
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      GTATGTCTTGACCGTTACTAATTATTTTTAGGGCATTGGTATTTGTCATAGATTCAAAGT 390
consensus_10011#2      G-------------------------------GCATTGGTATTTGTCATAGATTCAAAGT 289
                                                                                   

consensus_10011#0      ATATTGTTGACTAAATTTCCAGAATAATAGATT--------------------------- 1157
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      CTATTCAGAGTGACGTAAAAGATGTTGCTGAGTTTTTGTACAATATACTTGTGGATAAGG 450
consensus_10011#2      CTATTCAGAGTGACGTAAAAGATGTTGCTGAGTTTTTGTACAATATACTTGTGGATAAGG 349
                                                                                   

consensus_10011#0      ------------------------------------------------------------
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      TCTTTATAAAGAATCGCGTAAAATTACTAGTAGCTTGTAATAAACAAGATGCTACCACGG 510
consensus_10011#2      TCTTTATAAAGAATCGCGTAAAATTACTAGTAGCTTGTAATAAACAAGATGCTACCACGG 409
                                                                                   

consensus_10011#0      ------------------------------------------------------------
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      CAAAAGGTGTCAGTGTAGTAACTCATTTACTTGAAAAAGAATTGAATACTCTTACGTTTA 570
consensus_10011#2      CAAAAGGTGTCAGTGTAGTAACTCATTTACTTGAAAAAGA-TTGAATACTCTTACGTTTA 468
                                                                                   

consensus_10011#0      ------------------------------------------------------------
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      CACGTACTGGTGCGCTTGCTGGCCTCGATCAGTCCACCATATCAACACTGACAAGGCCGG 630
consensus_10011#2      CACGTACTGGTGCGCTTGCTGGCCTC---------------------------------- 494
                                                                                   

consensus_10011#0      ------------------------------------------------------------
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      GAGTGACCTTCACTTTTGCAAAAAGTCGTTTACCGGTGGATTTCGTCGAAATTTCTGCTA 690
consensus_10011#2      ------------------------------------------------------------
                                                                                   

consensus_10011#0      ------------------------------------------------------------
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      CAAATAATGCTTCTGCAATTCATAAGTGGCTTGTGCAACTATAAGTTTGTGAGAAAACCT 750
consensus_10011#2      ------------------------------------------------------------
                                                                                   

consensus_10011#0      ------------------------------------------------------------
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      ACTGTTCTTGTATTAAAAGATACCTGAGGTTTCCTCTTGTTGTTAATACATTTTGTCAAC 810
consensus_10011#2      ------------------------------------------------------------
                                                                                   

consensus_10011#0      ------------------------------------------------------------
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      ATTATGCTTCCTGTGAATATGTTGTAATTTCACTTCACCATTCCGTTAAATATTCATGAG 870
consensus_10011#2      ------------------------------------------------------------
                                                                                   

consensus_10011#0      ------------------------------------------------------------
consensus_10011#3      ------------------------------------------------------------
consensus_10011#1      TACTATCTGTCGTTCAGATTACTTACGGATAATATATATTCTTTTAATGGTTCAAAAAAA 930
consensus_10011#2      ------------------------------------------------------------
                                                                                   

consensus_10011#0      ----------
consensus_10011#3      ----------
consensus_10011#1      AAAAAAAAAA 940
consensus_10011#2      ----------