cluster # 10017

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Schistosoma mansoni
cluster # 10017 cluster # 10017 Sequences # 13 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10017#0 length = 1668 sequences # 11

consensus_10017#1 length = 472 sequences # 1
consensus_10017#2 length = 295 sequences # 1

consensusID : consensus_10017#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1668
fasta sequence

                              [AAAACGAAAATCTTGTAGCGTTTATGTATATCAATAACCACAGCAGTCAAATTTATCCAAGTTTTGCATTCATATATTATCAACGAAATGCAACCTACCTGTTGATTGACATTTATTAGCTTCAGTTGATTATTTTCATCTCGTTAATTTTTACGATAAAACTTTGTTTTGAAAAAGATCTTCATTTTCAATGCTTCCTAATAAATCTGAGTCATTTGCACCATCTGTGGGAAATGAATTAACCAGAAATTTTAAAAATCTTGGTGAACCTGTGTACGTAAATGTATATCATTTGCATTGGCCTAATGGTTTGAAAATGGGTGCTTATCATACTGGAACTGTAGTATACGATAGAGAATTCGGTTTTGGTGGACATCCATTTGCAAGTAGCGGTATCTTCCAGACTACACCAATGGATATTGACAGTTTAGGTGAAGAAATTTCATTCAAAGAAAGATTATATATGGGTCGGACGTATTTATCGAAAAAAGCTGTAGAACGTTTGCTTGCTAGTTTAGCTGATGAATTCCGTGGTGACGCTTACCATTTACTACATTTCAATTGTAATCATTTCACTTCACAGTTCGTTGATCTTTTATGTCACGGTGTTTTACCCAAATGGATTAATCGATTAGCTCGTATTGTATCTGGATTACCATTTATTGAAACTTTTCTACCACCTCATTGGATTCGACCAAGTTTAATGTATGACTGTGAATTCGATGAATTAAGTAATGATGATGAAGAGGAAGAAAGAACAAAAGAAGATATCAATCAGAATGATCAAAATGAGCACTTGATTAATGGGAATACTAATGATAACAATAACAATCAGATTGTTTGTTACAAAAACGAAGACGAAGATCTCTCTATAACAAAGTCATTTACTGAGAAACCATATTTCCAATTTGTTCATTCTACATCTACAAATAATGGTCATGTTCCGCATCGAACTACTAATAGTATAGCAAATAATAATAAAACTTCTGTTGACCATTCGGATAATCATCACCATGACTCTTCATTATTTCAACTAAGGACAGTTTAGTTTTAAGAATGAACAACAAAACTTGCCTTTTTTCCTTACATTTTGCCGCTCAATTAATGTAAAAAAACAGTGTTATTGTGTACAGATTGATGATATATCTTTTCAAGTCTATCAAATGGAGAGAAAGAATAATTACTTGTCATTATTTTTTGATTAATTTTACATGACAATATCTTAAATAAAGTGAATACGTTTTCTACATTCCAATCTGTATTGTTTTTCTATGAACTATGTATCTTTCATAGTCAACGGAAGCTGTGGTTCGTGTAGTTCATCACTTTGATCTTCATCAAATATTCCCCGTTTTTTTCTATGATAGTCTTTCAAAACTTCTGTGTTGTTCACATTTGTTGTCTGGTTAATTACCTCTTTACTGATGTTAATTTGC-TTTTTTTTCTCAATTGAAATGTTTACTTTGTT-AATTATTTTTATT-ATTATTTTCCGCCTGACAGTTCGA-TACTCCACCATATTCCAGTATCCTATCAAGTCCCTCTTCTCTTTGATAAATTAGGTTGTTTTATACCACTAATTGTATTGTTGATAAATCTTCCATTGTTTACGTTACCAGTATGTTTTACATGTATTCTTGTTTTTTTTTTCAATTCAAAATGAAGTTTCCA]

[+] EMBL AI976684             [AAAACGAAAATCTTGTAGCGTTTATGTATATCAATAACCACAGCAGTCAAATTTATCCAAGTTTTGCATTCATATATTATCAACGAAATGCAACCTACCTGTTGATTGACATTTATTAGCTTCAGTTGATTATTTTCATCTCGTTAATTTTTACGATAAAACTTTGTTTTGAAAAAGATCTTCATTTTCAATGCTTCCTAATAAATCTGAGTCATTTGCACCATCTGTGGGAAATGAATTAACCAGAAATTTTAAAAATCTTGGTGAACCTGTGTACGTAAATGTATATCATTTGCATTGGCCTAATGGTTTGAAAATGGGTGCTTATCATACTGGAACTGTAGTATACGATAGAGAATTCGGTTTTGGTGGACATCCATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AI976394             [AAAACGAAAATCTTGTAGCGTTTATGTATATCAATAACCACAGCAGTCAAATTTATCCAAGTTTTGCATTCATATATTATCAACGAAATGCAACCTACCTGTTGATTGACATTTATTAGCTTCAGTTGATTATTTTCATCTCGTTAATTTTTACGATAAAACTTTGTTTTGAAAAAGATCTTCATTTTCAATGCTTCCTAATAAATCTGAGTCATTTGCACCATCTGTGGGAAATGAATTAACCAGAAATTTTAAAAATCTTGGTGAACCTGTGTACGTAAATGTATATCATTTGCATTGGCCTAATGGTTTGAAAATGGGTGCTTATCATACTGGAACTGTAGTATACGATAGAGAATTCGGTTTTGGTGGACATCCATTTGCAAGTAGCGGTATCTTCCAGACTACACCAATGGATATTGACAGTTTACGTGAAGAAATTTCATTCAAAGAAAGATTATATATGGGTCGGACGTATTTATCGAAAAAAGCTGTAGAACGTTTGCTTGCTAGTTTAGCTGATGAATTCCGTGGTGACGCTTACCATTTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AI975677             [AAAACGAAAATCTTGTAGCGTTTATGTATATCAATAACCACAGCAGTCAAATTTATCCAAGTTTTGCATTCATATATTATCAACGAAATGCAACCTACCTGTTGATTGACATTTATTAGCTTCAGTTGATTATTTTCATCTCGCTAATTTTTACGATAAAACTTTGTTTTGAAAAAGATCTTCATTTTCAATGCTTCCTAATAAATCTGAGTCATTTGCACCATCTGTGGGAAATGAATTAACCAGAAATTTTAAAAATCTTGGTGAACCTGTGTACGTAAATGTATATCATTTGCATTGGCCTAATGGGTTGAAAATGGGTGCTTATCATACTGGAACTGTAGTATACGATAGAGAATTCGGTTTTGGTGGACATCCATTTGCAAGTAGCGGTATCTTCCATACTACACCAATGGATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD081313             [                                                                                                                                                                                                                                                                                                     TGCATTGGCCTAATGGTTTGAAAATGGGTGCTTATCATACTGGAACTGTAGTATACGATAGAGAATTCGGTTTTGGTGGACATCCATTTGCAAGTAGCGGTATCTTCCAGACTACACCAATGGATATTGACAGTTTAGGTGAAGAAATTTCATTCAAAGAAAGATTATATATGGGTCGGACGTATTTATCGAAAAAAGCTGTAGAACGTTTGCTTGCTAGTTTAGCTGATGAATTCCGTGGTGACGCTTACCATTTACTACATTTCAATTGTAATCATTTCACTTCACAGTTCGTTGATCTTTTATGTCACGGTGTTTTACCCAAATGGATTAATCGATTAGCTCGTATTGTATCTGGATTACCATTTATTGAAACTTTTCTACCACCTCATTGGATTCGACCAAGTTTAATGTATGACTGTGAATTCGATGAATTAAGTAATGATGATGAAGAGGAAGAAAGAACAAAAGAAGATATCAATCAGAATGATCAAAATGAGCACTTGATTAATGGGAATACTAATGATAACAATAACAATCAGATTGTTTGTTACAAAAACGAAGACGAAGATCTCTCTATAACAAAGTCATTTACTGAGAAACCATATTTCCAATTTGTTCATTCTACATCTACAAATAATGGTCATGTTCCGCATCGAACTACTAATAGTATAGCAAATAATAATAAAACTTCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD192074             [                                                                                                                                                                                                                                                                                                                                                                                                  GTAGCGGTATCTTCCAGACTACACCAATGGATATTGACAGTTTAGGTGAAGAAATTTCATTCAAAGAAAGATTATATATGGGTCGGACGTATTTATCGAAAAAAGCTGTAGAACGTTTGCTTGCTAGTTTAGCTaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD062090             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACATTTCAATTGTAATCATTTCACTTCACAGTTCGTTGATCTTTTATGTCACGGTGTTTTACCCAAATGGATTAATCGATTAGCTCGTATTGTATCTGGATTACCATTTATTGAAACTTTTCTACCACCTCATTGGATTCGACCAAGTTTAATGTATGACTGTGAATTCGATGAATTAAGTAATGATGATGAAGAGGAAGAAAGAACAAAAGAAGATATCAATCAGAATGATCAAAATGAGCACTTGATTAATGGGAATACTAATGATAACAATAACAATCAGATTGTTTGTTACAAAAACGAAGACGAAGATCTCTCTATAACAAAGTCATTTACTGAGAAACCATATTTCCAATTTGTTCATTCTACATCTACAAATAATGGTCATGTTCCGCATCGAACTACTAATAGTATAGCAAATAATAATAAAACTTCTGTTGACCATTCGGATAATCATCACCATGACTCTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD081250             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CAGAATGATCAAAATGAGCACTTGATTAATGGGAATACTAATGATAACAATAACAATCAGATTGTTTGTTACAAAAACGAAGACGAAGATCTCTCTATAACAAAGTCATTTACTGAGAAACCATATTTCCAATTTGTTCATTCTACATCTACAAATAATGGTCATGTTCCGCATCGAACTACTAATAGTATAGCAAATAATAATAAAACTTCTGTTGACCATTCGGATAATCATCACCATGACTCTTCATTATTTCAACTAAGGACAGTTTAGTTTTAAGAATGAACAACAAAACTTGCCTTTTTTCCTTACATTTTGCCGCTCAATTAATGTAAAAAAACAGTGTTATTGTGTACAGATTGATGATATATCTTTTCAAGTCTATCAAATGGAGAGAAAGAATAATTACTTGTCATTATTTTTTGATTAATTTTACATGACAATATCTTAAATAAAGTGAATACGTTTTCTACATTCCAATCTGTATTGTTTTT                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD075145             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CATTCGGATAATCATCACCATGACTCTTCATTATTTCAACTAAGGACAGTTTAGTTTTAAGAATGAACAACAAAACTTGCCTTTTTTCCTTACATTTTGCCGCTCAATTAACGTAAAAAAACAGTGTTATTGTGTACAGATTGATGATATATCTTTTCAAGTCTATCAAATGGAGAGAAAGAATAATTACTTGTCATTATTTTTTGATTAATTTTACATGACAATATCTTAAATAAAGTGAATACGTTTTCTACATTCCAATCTGTATTGTTTTTCTATGAACTATGTATCTTTCATAGTCAACGGAAGCTGTGGTTCGTGTAGTTCATCACTTTGATCTTCATCAAATATTCCCCGTTTTTTTCTATGATAGTCTTTCAAAACTTCTGTGTTGTTCACATTTGTTGTCTGGTTAATTACCTCTTTACTGATGTTAATTTGCTTTTTTTTTCTCAATTGAAATGTTTACTTTGTT AATTATTTTTATT ATTATTTTCCGCCTGACAGTTCGA TACTCCACCATATTCCAGTATCCTATCAAGTCCCTCTTCTCTTTGATAAATTAGGTTGTTTTATACCACTAATTGTATTGTTGATAAATCTT                                                                       ]
[-] EMBL CD075080             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTTGCCGCTCAATTAATGTAAAAAAACAGTGTTATTGTGTACAGATTGATGATATATCTTTTCAAGTCTATCAAATGGAGAGAAAGAATAATTACTTGTCATTATTTTTTGATTAATTTTACATGACAATATCTTAAATAAAGTGAATACGTTTTCTACATTCCAATCTGTATTGTTTTTCTATGAACTATGTATCTTTCATAGTCAACGGAAGCTGTGGTTCGTGTAGTTCATCACTTTGATCTTCATCAAATATTCCCCGTTTTTTTCTATGATAGTCTTTCAAAACTTCTGTGTTGTTCACATTTGTTGTCTGGTTAATTACCTCTTTACTGATGTTAATTTGC TTTTTTTTCTCAATTGAAATGTTTACTTTGTT AATTATTTTTATT ATTATTTTCCGCCTGACAGTTCGA TACTCCACCATATTCCAGTATCCTATCAAGTCCCTCTTCTCTTTGATAAATTAGGTTGTTTTATACCACTAATTGTATTGTTGATAAATCTTCCATTGTTTACGTTACCAGTATGTTTTACATGTATTCTTGTTTTTTTTTTCAATTCAAAATGAAGTTTC  ]
[+] EMBL AI977425             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATGAACTATGTATCTTTCATAGTCAACGGAAGCTGTGGTTCGTGTAGTTCATCACTTTGATCTTCATCAAATATTCCCCGTTTTTTTCTATGATAGTCTTTCAAAACTTCTGTGTTGTTCACATTTGTTGTCTGGTTAATTACCTCTTTACTGATGTTAATTTGC TTTTTTTTCTCAATTGAAATGTTTACTTTGTT AATTATTTTTATT ATTATTTTCCGCCTGACAGTTCGA TACTCCACCATATTCCAGTATCCTATCAAGTCCCTCTTCTCTTTGATAAATTAGGTTGTTTTATACCACTAATTGTATTGTTGATAAATCTTCCATTGTTTACGTTACCAGTATGTTTTACATGTATTCTTGTTTTTTTTTTCAATTCAGAATGAAGTTTCCA]
[+] EMBL AA917181             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     nGTTTTTTTCTATGATAGTCTTTCAAAACTTCTGTGTTGTTCACATTTGTTGTCTGGTTAATTACCTCTTTACTGATGTTAATTTGC TTTTTTTTCTCAATTGAAATGTTTACTTTGTTAAATTAAATTTATTAATTA TTTCCGCCTGACAGTTCGATTACTCCACC TA TCC GTATCCTATCgttc                                                                                                                                    ]




>consensus_10017#0
AAAACGAAAATCTTGTAGCGTTTATGTATATCAATAACCACAGCAGTCAAATTTATCCAA
GTTTTGCATTCATATATTATCAACGAAATGCAACCTACCTGTTGATTGACATTTATTAGC
TTCAGTTGATTATTTTCATCTCGTTAATTTTTACGATAAAACTTTGTTTTGAAAAAGATC
TTCATTTTCAATGCTTCCTAATAAATCTGAGTCATTTGCACCATCTGTGGGAAATGAATT
AACCAGAAATTTTAAAAATCTTGGTGAACCTGTGTACGTAAATGTATATCATTTGCATTG
GCCTAATGGTTTGAAAATGGGTGCTTATCATACTGGAACTGTAGTATACGATAGAGAATT
CGGTTTTGGTGGACATCCATTTGCAAGTAGCGGTATCTTCCAGACTACACCAATGGATAT
TGACAGTTTAGGTGAAGAAATTTCATTCAAAGAAAGATTATATATGGGTCGGACGTATTT
ATCGAAAAAAGCTGTAGAACGTTTGCTTGCTAGTTTAGCTGATGAATTCCGTGGTGACGC
TTACCATTTACTACATTTCAATTGTAATCATTTCACTTCACAGTTCGTTGATCTTTTATG
TCACGGTGTTTTACCCAAATGGATTAATCGATTAGCTCGTATTGTATCTGGATTACCATT
TATTGAAACTTTTCTACCACCTCATTGGATTCGACCAAGTTTAATGTATGACTGTGAATT
CGATGAATTAAGTAATGATGATGAAGAGGAAGAAAGAACAAAAGAAGATATCAATCAGAA
TGATCAAAATGAGCACTTGATTAATGGGAATACTAATGATAACAATAACAATCAGATTGT
TTGTTACAAAAACGAAGACGAAGATCTCTCTATAACAAAGTCATTTACTGAGAAACCATA
TTTCCAATTTGTTCATTCTACATCTACAAATAATGGTCATGTTCCGCATCGAACTACTAA
TAGTATAGCAAATAATAATAAAACTTCTGTTGACCATTCGGATAATCATCACCATGACTC
TTCATTATTTCAACTAAGGACAGTTTAGTTTTAAGAATGAACAACAAAACTTGCCTTTTT
TCCTTACATTTTGCCGCTCAATTAATGTAAAAAAACAGTGTTATTGTGTACAGATTGATG
ATATATCTTTTCAAGTCTATCAAATGGAGAGAAAGAATAATTACTTGTCATTATTTTTTG
ATTAATTTTACATGACAATATCTTAAATAAAGTGAATACGTTTTCTACATTCCAATCTGT
ATTGTTTTTCTATGAACTATGTATCTTTCATAGTCAACGGAAGCTGTGGTTCGTGTAGTT
CATCACTTTGATCTTCATCAAATATTCCCCGTTTTTTTCTATGATAGTCTTTCAAAACTT
CTGTGTTGTTCACATTTGTTGTCTGGTTAATTACCTCTTTACTGATGTTAATTTGCTTTT
TTTTCTCAATTGAAATGTTTACTTTGTTAATTATTTTTATTATTATTTTCCGCCTGACAG
TTCGATACTCCACCATATTCCAGTATCCTATCAAGTCCCTCTTCTCTTTGATAAATTAGG
TTGTTTTATACCACTAATTGTATTGTTGATAAATCTTCCATTGTTTACGTTACCAGTATG
TTTTACATGTATTCTTGTTTTTTTTTTCAATTCAAAATGAAGTTTCCA

consensusID : consensus_10017#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 472
fasta sequence

                              [ATGTATATCAATAACCACATCAGTCAAATTTATCCAAGTTTTGCATTCATATATTATCAACNAAATGCAACCTACCTGTTGATTGACATGTAGTTTCTTTCATTATAAATACTGAAACAGCATACGACTTGTTATTAGCTTCAGTTGATTATTTTCATCTCGTTAATTTTTACNATAAAACTTTGTTTTGAAAAANATCTTCATTTTCAATGCTTCCTAATAAATCTGAGTCATTTGCACCATCTGTGGGAAATGAATTAACCAGAAATTTTAAAAATCTTGGTGAACCTGTGTACGTAAATGTATATCATTTGCATTGGCCTAATGGTTTGAAAATGGGTGCTTATCATACTGGAACTGTAGTATACGATAGAGAATTCGGTTTTGGTGGACATCCATTTGCAAGTAGCGGTATCTTCCANACTACACCAATGGATATTGACAGTTTAGGTTGAAGAAATTTCATTCCAAG]

[+] EMBL AI111035             [ATGTATATCAATAACCACATCAGTCAAATTTATCCAAGTTTTGCATTCATATATTATCAACNAAATGCAACCTACCTGTTGATTGACATGTAGTTTCTTTCATTATAAATACTGAAACAGCATACGACTTGTTATTAGCTTCAGTTGATTATTTTCATCTCGTTAATTTTTACNATAAAACTTTGTTTTGAAAAANATCTTCATTTTCAATGCTTCCTAATAAATCTGAGTCATTTGCACCATCTGTGGGAAATGAATTAACCAGAAATTTTAAAAATCTTGGTGAACCTGTGTACGTAAATGTATATCATTTGCATTGGCCTAATGGTTTGAAAATGGGTGCTTATCATACTGGAACTGTAGTATACGATAGAGAATTCGGTTTTGGTGGACATCCATTTGCAAGTAGCGGTATCTTCCANACTACACCAATGGATATTGACAGTTTAGGTTGAAGAAATTTCATTCCAAG]




>consensus_10017#1
ATGTATATCAATAACCACATCAGTCAAATTTATCCAAGTTTTGCATTCATATATTATCAA
CNAAATGCAACCTACCTGTTGATTGACATGTAGTTTCTTTCATTATAAATACTGAAACAG
CATACGACTTGTTATTAGCTTCAGTTGATTATTTTCATCTCGTTAATTTTTACNATAAAA
CTTTGTTTTGAAAAANATCTTCATTTTCAATGCTTCCTAATAAATCTGAGTCATTTGCAC
CATCTGTGGGAAATGAATTAACCAGAAATTTTAAAAATCTTGGTGAACCTGTGTACGTAA
ATGTATATCATTTGCATTGGCCTAATGGTTTGAAAATGGGTGCTTATCATACTGGAACTG
TAGTATACGATAGAGAATTCGGTTTTGGTGGACATCCATTTGCAAGTAGCGGTATCTTCC
ANACTACACCAATGGATATTGACAGTTTAGGTTGAAGAAATTTCATTCCAAG

consensusID : consensus_10017#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 295
fasta sequence

                              [ACTAGATCGACAGAATTCGATCAGAACTATGAGCTACTTTTATGTCACGGTGTTTTACCCAAATGGATTAATCGATTAGCTCGTATTGTATCTGGATTACCATTTATTGAAACTTTTCTACCACCTCATTGGATTCGACCAAGTTTAATGTATGACTGTGAATTCGATGAATTAAGTAATGATGATGAAGAGGAAGAAAGAACAAAAGAAGATATCAATCAGAATGATCAAAATGAGCACTTGATTAATGNGAATACTAATGATAACAATAACCATCAGATTGTTTGTTACAAAA]

[+] EMBL CD179874             [ACTAGATCGACAGAATTCGATCAGAACTATGAGCTACTTTTATGTCACGGTGTTTTACCCAAATGGATTAATCGATTAGCTCGTATTGTATCTGGATTACCATTTATTGAAACTTTTCTACCACCTCATTGGATTCGACCAAGTTTAATGTATGACTGTGAATTCGATGAATTAAGTAATGATGATGAAGAGGAAGAAAGAACAAAAGAAGATATCAATCAGAATGATCAAAATGAGCACTTGATTAATGNGAATACTAATGATAACAATAACCATCAGATTGTTTGTTACAAAA]




>consensus_10017#2
ACTAGATCGACAGAATTCGATCAGAACTATGAGCTACTTTTATGTCACGGTGTTTTACCC
AAATGGATTAATCGATTAGCTCGTATTGTATCTGGATTACCATTTATTGAAACTTTTCTA
CCACCTCATTGGATTCGACCAAGTTTAATGTATGACTGTGAATTCGATGAATTAAGTAAT
GATGATGAAGAGGAAGAAAGAACAAAAGAAGATATCAATCAGAATGATCAAAATGAGCAC
TTGATTAATGNGAATACTAATGATAACAATAACCATCAGATTGTTTGTTACAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10017#0      AAAACGAAAATCTTGTAGCGTTTATGTATATCAATAACCACAGCAGTCAAATTTATCCAA 60
consensus_10017#1      -----------------------ATGTATATCAATAACCACATCAGTCAAATTTATCCAA 37
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      GTTTTGCATTCATATATTATCAACGAAATGCAACCTACCTGTTGATTGACAT-------- 112
consensus_10017#1      GTTTTGCATTCATATATTATCAACNAAATGCAACCTACCTGTTGATTGACATGTAGTTTC 97
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      ----------------------------------TTATTAGCTTCAGTTGATTATTTTCA 138
consensus_10017#1      TTTCATTATAAATACTGAAACAGCATACGACTTGTTATTAGCTTCAGTTGATTATTTTCA 157
consensus_10017#2      --------------------------------------------------ACTAGATCGA 10
                                                                         * **  *  *

consensus_10017#0      TCTCGTT-AATTTTTACGATAAAACTTTGTTTTGAAAAAGATCTTCATTTTCAATGCTTC 197
consensus_10017#1      TCTCGTT-AATTTTTACNATAAAACTTTGTTTTGAAAAANATCTTCATTTTCAATGCTTC 216
consensus_10017#2      CAGAATTCGATCAGAACTATGAGCTACTTTTATGTCACGGTGTTTTACCCA-AATG---- 65
                            **  **    ** ** *     * ** **  *      ** *     ****    

consensus_10017#0      CTAATAAATCTGAGTCATTTGCACCATCTGTGGGAAATGAATTAACCAGAAATTTTAAAA 257
consensus_10017#1      CTAATAAATCTGAGTCATTTGCACCATCTGTGGGAAATGAATTAACCAGAAATTTTAAAA 276
consensus_10017#2      --GATTAATC-GATTAGCTCGTATTGTATCTGGATTACCATTTATTGAAACTTTTCTACC 122
                          ** **** ** *   * * *   * * ***   *  * ***   * *  ***  *  

consensus_10017#0      ATCTTGGTGAACCTGTGTACGTA-AATGTATATCATTTGCATTGGCCTAATGGTTTGAAA 316
consensus_10017#1      ATCTTGGTGAACCTGTGTACGTA-AATGTATATCATTTGCATTGGCCTAATGGTTTGAAA 335
consensus_10017#2      ACCTCATTGGATTCGACCAAGTTTAATGTATGAC-TGTGAATTCGATGAATTAAGTAATG 181
                       * **   ** *   *   * **  *******  * * ** *** *   ***    * *  

consensus_10017#0      ATGGGTGCTTATCATACTGGAACTGTAGTATACGATAGAGAATTCGGTTTTGGTGGACAT 376
consensus_10017#1      ATGGGTGCTTATCATACTGGAACTGTAGTATACGATAGAGAATTCGGTTTTGGTGGACAT 395
consensus_10017#2      ATGA-TGAAGAGGAAGAAAGAACAAAAGAAGATATCAATCAGAATGATCAAAATGAGCAC 240
                       ***  **   *  *     ****   ** * *    *   *    * *     **  ** 

consensus_10017#0      CCATTTGCAAGTAGCGGTATCTTCCAGACTACACCAATGGATATT-GACAGTTTAGGT-G 434
consensus_10017#1      CCATTTGCAAGTAGCGGTATCTTCCANACTACACCAATGGATATT-GACAGTTTAGGTTG 454
consensus_10017#2      TTGATT---AATGNGAATACT-----AATGATAACAATAACCATCAGATTGTTT--GTTA 290
                           **   * *     **        *  * * ****    **  **  ****  **  

consensus_10017#0      AAGAAATTTCATTCAAAGAAAGATTATATATGGGTCGGACGTATTTATCGAAAAAAGCTG 494
consensus_10017#1      AAGAAATTTCATTCCAAG------------------------------------------ 472
consensus_10017#2      CAAAA------------------------------------------------------- 295
                        * **                                                       

consensus_10017#0      TAGAACGTTTGCTTGCTAGTTTAGCTGATGAATTCCGTGGTGACGCTTACCATTTACTAC 554
consensus_10017#1      ------------------------------------------------------------
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      ATTTCAATTGTAATCATTTCACTTCACAGTTCGTTGATCTTTTATGTCACGGTGTTTTAC 614
consensus_10017#1      ------------------------------------------------------------
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      CCAAATGGATTAATCGATTAGCTCGTATTGTATCTGGATTACCATTTATTGAAACTTTTC 674
consensus_10017#1      ------------------------------------------------------------
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      TACCACCTCATTGGATTCGACCAAGTTTAATGTATGACTGTGAATTCGATGAATTAAGTA 734
consensus_10017#1      ------------------------------------------------------------
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      ATGATGATGAAGAGGAAGAAAGAACAAAAGAAGATATCAATCAGAATGATCAAAATGAGC 794
consensus_10017#1      ------------------------------------------------------------
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      ACTTGATTAATGGGAATACTAATGATAACAATAACAATCAGATTGTTTGTTACAAAAACG 854
consensus_10017#1      ------------------------------------------------------------
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      AAGACGAAGATCTCTCTATAACAAAGTCATTTACTGAGAAACCATATTTCCAATTTGTTC 914
consensus_10017#1      ------------------------------------------------------------
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      ATTCTACATCTACAAATAATGGTCATGTTCCGCATCGAACTACTAATAGTATAGCAAATA 974
consensus_10017#1      ------------------------------------------------------------
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      ATAATAAAACTTCTGTTGACCATTCGGATAATCATCACCATGACTCTTCATTATTTCAAC 1034
consensus_10017#1      ------------------------------------------------------------
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      TAAGGACAGTTTAGTTTTAAGAATGAACAACAAAACTTGCCTTTTTTCCTTACATTTTGC 1094
consensus_10017#1      ------------------------------------------------------------
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      CGCTCAATTAATGTAAAAAAACAGTGTTATTGTGTACAGATTGATGATATATCTTTTCAA 1154
consensus_10017#1      ------------------------------------------------------------
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      GTCTATCAAATGGAGAGAAAGAATAATTACTTGTCATTATTTTTTGATTAATTTTACATG 1214
consensus_10017#1      ------------------------------------------------------------
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      ACAATATCTTAAATAAAGTGAATACGTTTTCTACATTCCAATCTGTATTGTTTTTCTATG 1274
consensus_10017#1      ------------------------------------------------------------
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      AACTATGTATCTTTCATAGTCAACGGAAGCTGTGGTTCGTGTAGTTCATCACTTTGATCT 1334
consensus_10017#1      ------------------------------------------------------------
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      TCATCAAATATTCCCCGTTTTTTTCTATGATAGTCTTTCAAAACTTCTGTGTTGTTCACA 1394
consensus_10017#1      ------------------------------------------------------------
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      TTTGTTGTCTGGTTAATTACCTCTTTACTGATGTTAATTTGCTTTTTTTTCTCAATTGAA 1454
consensus_10017#1      ------------------------------------------------------------
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      ATGTTTACTTTGTTAATTATTTTTATTATTATTTTCCGCCTGACAGTTCGATACTCCACC 1514
consensus_10017#1      ------------------------------------------------------------
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      ATATTCCAGTATCCTATCAAGTCCCTCTTCTCTTTGATAAATTAGGTTGTTTTATACCAC 1574
consensus_10017#1      ------------------------------------------------------------
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      TAATTGTATTGTTGATAAATCTTCCATTGTTTACGTTACCAGTATGTTTTACATGTATTC 1634
consensus_10017#1      ------------------------------------------------------------
consensus_10017#2      ------------------------------------------------------------
                                                                                   

consensus_10017#0      TTGTTTTTTTTTTCAATTCAAAATGAAGTTTCCA 1668
consensus_10017#1      ----------------------------------
consensus_10017#2      ----------------------------------