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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10137#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2350 fasta sequence
[TTCTCCATGTTTGTATGCCATGTATGGTTTCACATCTGGACCTCCTGTACAATCTATTCCTGCGTTTCTGACCAAATTAAAGTTACTGGTGGATGATGAAGAAACAAACGAACTCATATATTGGGATCCGCACGGGACAAGTTTTCACATACGTGATGGAAACCGCTTAGCCAAAGAATTACTACCCCTTTATTTCAAACACAACAATTTATCTAGTTTTATAAGGCAGTTAAATATGTATGGTTTTAGAAAAATAAATCGTGTGGATCCATCTCTGCCTCTAAAATCTGACACAGAAGACATGGAATTTAGTCATCCTTACTTCATCCGCAATAAAGATATTTTGCTATCGAAAATTCAGAGGCGGACCTCAAACATGTTCTCACCAATAATGGGGTCAAGAAACCAAAGTTTTGGTGTGAAAGTACCTTATGTTCAGGCTAATTCGGGTTTAAATGGTTCCATAAGTGTATCACCCCAAAGACCAATAACTGCCACAGACTTCTTAAGACTGGCAGAGACTGTACGGCACTTGCGTTGCAATCAGGAGACTTTAAGTCAACAAATTAGTGTGTTAAAGTCGGAAAATCAGCTTTTGTATCGTGAACTTTCCGATTTACGAGAACATCACGACAAGCAGTCCCAACTTATCCAAACACTCTTCACATTCCTGTCAGCCTTTGCAAAGGAAGGGAGGTCTGCAAGCGTGTGCATCGGACAAACTAAACGTAAAGCTCTCCCTTCTATTACTCCATCCGGTTCAAGACTTCAAAACAAAGAACTAAAGCTGGATCTTCGAAAAGGTTTTCAAATTGAAAGAAACTCGGTTCAACCGCTCCAACTTGTTCAAACTAGCGATTTGCTCGGATCACATAAGCGCCCTAAATTCGACATACGAAATTTGTCTGCAAAAATAGGCAATACAAGTTCCGGTGCAAACATTACTGACCAGATTTCAGATATTGGGTCAGTTGTTCATATTCTCCCTTCAAATCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACGGTAAATATATATACTCTTTAACTGGTTCATCACCAGAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGTGAATGTTCAAGATGGACCGAGATATTATCTGTCTAAGGTGGACGATAATTTCACACATCCCACAAATGACGAAGAGTTTCCTGTAGGCCTTAATGTTGAGGAAGACGGTGTTACAGATGTGAATAATTCGATTTTAGAGTTAAACTGGCCATGTAGTAGATCAGATACGCCTTATTGTCTAACTGATTCTCCTGGTTTGAGTGACGTAATACCTTCAAAGTTAGATGGTGTAACAGATGAAAGTATTTGTGACCTGCTTCTTAACGGTGACTCACAAACTGAACAAGAAGTCGGTAACAACCAGCCTTTCTCAGAATCTACCCTTTCAAAATACAAGAAGGAGCCAATAAGAAAACAACATAAAATTCAGAATAGACCCCGTTGTATCGCACCTTTTGCTGAAAGCGACCCTCAATTTGTTTCCACAACTCTCCAGGACATTGACAGTCTTCCATGGGAGAAGTATCAAGATAGTGGTTTCGACTTCAATCTCGATGTTGAACAAAATCAAACAGAAAATTCACGCAGTTCTTCAAATGGTCTTATAGTCGGAAATGAAATTATTCCTGTAGAACCCGCTAATTTAAACGCATGTGATGATGTTATCCAGTTCTTGAGGTCAGAAATTCCTGGCAAGAAGTTAAAATCAGATGAACCATTAAAAACTGTTGCGACAACTGAGGCACATGCCTCTACTCAAAATGGTGCTATTGATTTAACAAGTAGTTCATCTGCACCAACTACCTGGAAAGCAAGACTTTCTGCCAACAATCGGCTCACAATATCCTCCTCTCCCAAAGTTAAACGAAAACAAGTGCCAGTTTTGATCCGCAGACAATCAATCACCCCTCTTTCAACTCCTGATTTTTGTGAGGAAGAATTGGAATGATGTACAATAAAATGCTCTTCATTTCATTGTAATTTCTACACAGTAGTTTCCCAAAGAATTTCTTCACGATAAAGATTCGCCAAAGTAATATATAATGAACAGCTTCTACGAAACCATTTTCTCCTCACATAAAAGTTTTCTCGTAAGCTCTGTCATAAACAGCGAGTTTCATGATCATGTTGGATGAATACGAATTTAAAGAACATACACGATTGTTTTTTCTATGAATAACCAAGTTTTAAACATTTCTCCAATGTGTTTATTGATCAGTCTTATCTGTTCATGCAGATTTTAATATATTATGTTTTACGAAGTATCAAAGTGGTGTACCAGATTCTATTAAACAATAATTGA]
[+] EMBL AF043418 [TTCTCCATGTTTGTATGCCATGTATGGTTTCACATCTGGACCTCCTGTACAATCTATTCCTGCGTTTCTGACCAAATTAAAGTTACTGGTGGATGATGAAGAAACAAACGAACTCATATATTGGGATCCGCACGGGACAAGTTTTCACATACGTGATGGAAACCGCTTAGCCAAAGAATTACTACCCCTTTATTTCAAACACAACAATTTATCTAGTTTTATAAGGCAGTTAAATATGTATGGTTTTAGAAAAATAAATCGTGTGGATCCATCTCTGCCTCTAAAATCTGACACAGAAGACATGGAATTTAGTCATCCTTACTTCATCCGCAATAAAGATATTTTGCTATCGAAAATTCAGAGGCGGACCTCAAACATGTTCTCACCAATAATGGGGTCAAGAAACCAAAGTTTTGGTGTGAAAGTACCTTATGTTCAGGCTAATTCGGGTTTAAATGGTTCCATAAGTGTATCACCCCAAAGACCAATAACTGCCACAGACTTCTTAAGACTGGCAGAGACTGTACGGCACTTGCGTTGCAATCAGGAGACTTTAAGTCAACAAATTAGTGTGTTAAAGTCGGAAAATCAGCTTTTGTATCGTGAACTTTCCGATTTACGAGAACATCACGACAAGCAGTCCCAACTTATCCAAACACTCTTCACATTCCTGTCAGCCTTTGCAAAGGAAGGGAGGTCTGCAAGCGTGTGCATCGGACAAACTAAACGTAAAGCTCTCCCTTCTATTACTCCATCCGGTTCAAGACTTCAAAACAAAGAACTAAAGCTGGATCTTCGAAAAGGTTTTCAAATTGAAAGAAACTCGGTTCAACCGCTCCAACTTGTTCAAACTAGCGATTTGCTCGGATCACATAAGCGCCCTAAATTCGACATACGAAATTTGTCTGCAAAAATAGGCAATACAAGTTCCGGTGCAAACATTACTGACCAGATTTCAGATATTGGGTCAGTTGTTCATATTCTCCCTTCAAATCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACGGTAAATATATATACTCTTTAACTGGTTCATCACCAGAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGTGAATGTTCAAGATGGACCGAGATATTATCTGTCTAAGGTGGACGATAATTTCACACATCCCACAAATGACGAAGAGTTTCCTGTAGGCCTTAATGTTGAGGAAGACGGTGTTACAGATGTGAATAATTCGATTTTAGAGTTAAACTGGCCATGTAGTAGATCAGATACGCCTTATTGTCTAACTGATTCTCCTGGTTTGAGTGACGTAATACCTTCAAAGTTAGATGGTGTAACAGATGAAAGTATTTGTGACCTGCTTCTTAACGGTGACTCACAAACTGAACAAGAAGTCGGTAACAACCAGCCTTTCTCAGAATCTACCCTTTCAAAATACAAGAAGGAGCCAATAAGAAAACAACATAAAATTCAGAATAGACCCCGTTGTATCGCACCTTTTGCTGAAAGCGACCCTCAATTTGTTTCCACAACTCTCCAGGACATTGACAGTCTTCCATGGGAGAAGTATCAAGATAGTGGTTTCGACTTCAATCTCGATGTTGAACAAAATCAAACAGAAAATTCACGCAGTTCTTCAAATGGTCTTATAGTCGGAAATGAAATTATTCCTGTAGAACCCGCTAATTTAAACGCATGTGATGATGTTATCCAGTTCTTGAGGTCAGAAATTCCTGGCAAGAAGTTAAAATCAGATGAACCATTAAAAACTGTTGCGACAACTGAGGCACATGCCTCTACTCAAAATGGTGCTATTGATTTAACAAGTAGTTCATCTGCACCAACTACCTGGAAAGCAAGACTTTCTGCCAACAATCGGCTCACAATATCCTCCTCTCCCAAAGTTAAACGAAAACAAGTGCCAGTTTTGATCCGCAGACAATCAATCACCCCTCTTTCAACTCCTGATTTTTGTGAGGAAGAATTGGAATGATGTACAATAAAATGCTCTTCATTTCATTGTAATTTCTACACAGTAGTTTCCCAAAGAATTTCTTCACGATAAAGATTCGCCAAAGTAATATATAATGAACAGCTTCTACGAAACCATTTTCTCCTCACATAAAAGTTTTCTCGTAAGCTCTGTCATAAACAGCGAGTTTCATGATCATGTTGGATGAATACGAATTTAAAGAACATACACGATTGTTTTTTCTATGAATAACCAAGTTTTAAACATTTCTCCAATGTGTTTATTGATCAGTCTTATCTGTTCATGCAGATTTTAATATATTATGTTTTACGAAGTATCAAAGTGGTGTACCAGATTCTATTAAACAATAATTGA]
consensusID : consensus_10137#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2280 fasta sequence
[TCTGGACCTCCTGTACAATCTATTCCTGCGTTTCTGACCAAATTAAAGTTACTGGTGGATGATGAAGAAACAAACGAACTCATATATTGGGATCCGCACGGGACAAGTTTTCACATACGTGATGGAAACCGCTTAGCCAAAGAATTACTACCCCTTTATTTCAAACACAACAATTTATCTAGTTTTATAAGGCAGTTAAATATGTATGGTTTTAGAAAAATAAATCGTGTGGATCCATCTCTGCCTCTAAAATCTGACACAGAAGACATGGAATTTAGTCATCCTTACTTCATCCGCAATAAAGATATTTTGCTATCGAAAATTCAGAGGCGGACCTCAAACATGTTCTCACCAATAATGGGGTCAAGAAACCAAAGTTTTGGTGTGAAAGTACCTTATGTTCAGGCTAATTCGGGTTTAAATGGTTCCATAAGTGTATCACCCCAAAGACCAATAACTGCCACAGACTTCTTAAGACTGGCAGAGACTGTACGGCACTTGCGTTGCAATCAGGAGACTTTAAGTCAACAAATTAGTGTGTTAAAGTCGGAAAATCAGCTTTTGTATCGTGAACTTTCCGATTTACGAGAACATCACGACAAGCAGTCCCAACTTATCCAAACACTCTTCACATTCCTGTCAGCCTTTGCAAAGGAAGGGAGGTCTGCAAGCGTGTGCATCGGACAAACTAAACGTAAAGCTCTCCCTTCTATTACTCCATCCGGTTCAAGATTTCAAAACAAAGAACTAAAGCTGGATCTTCGAAAAGGTTTTCAAATTGAAAGAAACTCGGTTCAACCGCTCCAACTTGTTCAAACTAGCGATTTGCTCGGATCACATAAGCGCCCTAAATTCGACATACGAAATTTGTCTGCAAAAATAGGCAATACAAGTTCCGGTGCAAACATTACTGACCAGATTTCA-GATATTGGGTCAGTTGTTCATATTCTCCCTTCAAATCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACGAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGTGAATGTTCAAGATGGACCGAGATATTATCTGTCTAAGGTGGACGATAATTTCACACATCCCACAAATGACGAAGAGTTTCCTGTAGGCCTTAATGTTGAGGAAGACGGTGTTACAGATGTGAATAATTCGATTTTAGAGTTAAACTGGCCATGTAGTAGATCAGATACGCCTTATTGTCTAACTGATTCTCCTGGTTTGAGTGACGTAATACCTTCAAAGTTAGATGGTGTAACAGATGAAAGTATTTGTGACCTGCTTCTTAACGGTGACTCACAAACTGAACAAGAAGTCGGTAACAACCAGCCTTTCTCAGAATCTACCCTTTCAAAATACAAGAAGGAGCCAATAAGAAAACAACAT-AAAATTCAGAATAGACCCCGTTGTATCGCACCTTTTGCTGAAAGCGACCCTCAATTTGTTTCCACAACTCTCCAGGACATTGACAGTCTTCCATGGGAGAAGTATCAAGATAGTGGTTTCGACTTCAATCTCGATGTTGAACAAAATCAAACAGAAAATTCACGCAGTTCTTCAAATGGTCTTATAGTCGGAAATGAAATTATTCCTGTAGAACCCGCTAATTTAAACGCATGTGATGATGTTATCCAGTTCTTGAGGTCAGAAATTCCTGGCAAGAAGTTAAAATCAGATGAACCATTAAAAACTGTTGCGACAACTGAGGCACATGCCTCTACTCAAAATGGTGCTATTGATTTAACAAGTAGTTCATCTGCACCAACTACCTGGAAAGCAAGACTTTCTGCCAACAATCGGCTCACAATATCCTCCTCTCCCAAAGTTAAACGAAAACAAGTGCCAGTTTTGATCCGCAGACAATCAATCACCCCTCTTTCAACTCCTGATTTTTGTGAGGAAGAATTGGAATGATGTACAATAAAATGCTCTTCATTTCATTGTAATTTCTACACAGTAGTTTCCCAAAGAATTTCTTCACGATAAAGATTCGCCAAAGTAATATATAATGAACAGCTTCTACGAAACCATTTTCTCCTCACATAAAAGTTTTCTCGTAAGCTCTGTCATAAACAGCGAGTTTCATGATCATGTTGGATGAATACGAATTTAAAGAACATACACGATTGTTTTTTCTATGAATAACCAAGTTTTAAACATTTCTCCAATGTGTTTATTGATCAGTCTTATCTGTTCATGCAGATTTTAATATATTATGTTTTACGAAGTATCAAAGTGGTGTACCAGATTCTATTAAACAATAATTGA]
[+] EMBL AF043416 [TCTGGACCTCCTGTACAATCTATTCCTGCGTTTCTGACCAAATTAAAGTTACTGGTGGATGATGAAGAAACAAACGAACTCATATATTGGGATCCGCACGGGACAAGTTTTCACATACGTGATGGAAACCGCTTAGCCAAAGAATTACTACCCCTTTATTTCAAACACAACAATTTATCTAGTTTTATAAGGCAGTTAAATATGTATGGTTTTAGAAAAATAAATCGTGTGGATCCATCTCTGCCTCTAAAATCTGACACAGAAGACATGGAATTTAGTCATCCTTACTTCATCCGCAATAAAGATATTTTGCTATCGAAAATTCAGAGGCGGACCTCAAACATGTTCTCACCAATAATGGGGTCAAGAAACCAAAGTTTTGGTGTGAAAGTACCTTATGTTCAGGCTAATTCGGGTTTAAATGGTTCCATAAGTGTATCACCCCAAAGACCAATAACTGCCACAGACTTCTTAAGACTGGCAGAGACTGTACGGCACTTGCGTTGCAATCAGGAGACTTTAAGTCAACAAATTAGTGTGTTAAAGTCGGAAAATCAGCTTTTGTATCGTGAACTTTCCGATTTACGAGAACATCACGACAAGCAGTCCCAACTTATCCAAACACTCTTCACATTCCTGTCAGCCTTTGCAAAGGAAGGGAGGTCTGCAAGCGTGTGCATCGGACAAACTAAACGTAAAGCTCTCCCTTCTATTACTCCATCCGGTTCAAGATTTCAAAACAAAGAACTAAAGCTGGATCTTCGAAAAGGTTTTCAAATTGAAAGAAACTCGGTTCAACCGCTCCAACTTGTTCAAACTAGCGATTTGCTCGGATCACATAAGCGCCCTAAATTCGACATACGAAATTTGTCTGCAAAAATAGGCAATACAAGTTCCGGTGCAAACATTACTGACCAGATTTCA GATATTGGGTCAGTTGTTCATATTCTCCCTTCAAATCTTCAGCTTACTCCAGTGAGTCTT GAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGTGAATGTTCAAGATGGACCGAGATATTATCTGTCTAAGGTGGACGATAATTTCACACATCCCACAAATGACGAAGAGTTTCCTGTAGGCCTTAATGTTGAGGAAGACGGTGTTACAGATGTGAATAATTCGATTTTAGAGTTAAACTGGCCATGTAGTAGATCAGATACGCCTTATTGTCTAACTGATTCTCCTGGTTTGAGTGACGTAATACCTTCAAAGTTAGATGGTGTAACAGATGAAAGTATTTGTGACCTGCTTCTTAACGGTGACTCACAAACTGAACAAGAAGTCGGTAACAACCAGCCTTTCTCAGAATCTACCCTTTCAAAATACAAGAAGGAGCCAATAAGAAAACAACAT AAAATTCAGAATAGACCCCGTTGTATCGCACCTTTTGCTGAAAGCGACCCTCAATTTGTTTCCACAACTCTCCAGGACATTGACAGTCTTCCATGGGAGAAGTATCAAGATAGTGGTTTCGACTTCAATCTCGATGTTGAACAAAATCAAAC ]
[+] EMBL AF043417 [ CAAATTAAAGTTACTGGTGGATGATGAAGAAACAAACGAACTCATATATTGGGATCCGCACGGGACAAGTTTTCACATACGTGATGGAAACCGCTTAGCCAAAGAATTACTACCCCTTTATTTCAAACACAACAATTTATCTAGTTTTATAAGGCAGTTAAATATGTATGGTTTTAGAAAAATAAATCGTGTGGATCCATCTCTGCCTCTAAAATCTGACACAGAAGACATGGAATTTAGTCATCCTTACTTCATCCGCAATAAAGATATTTTGCTATCGAAAATTCAGAGGCGGACCTCAAACATGTTCTCACCAATAATGGGGTCAAGAAACCAAAGTTTTGGTGTGAAAGTACCTTATGTTCAGGCTAATTCGGGTTTAAATGGTTCCATAAGTGTATCACCCCAAAGACCAATAACTGCCACAGACTTCTTAAGACTGGCAGAGACTGTACGGCACTTGCGTTGCAATCAGGAGACTTTAAGTCAACAAATTAGTGTGTTAAAGTCGGAAAATCAGCTTTTGTATCGTGAACTTTCCGATTTACGAGAACATCACGACAAGCAGTCCCAACTTATCCAAACACTCTTCACATTCCTGTCAGCCTTTGCAAAGGAAGGGAGGTCTGCAAGCGTGTGCATCGGACAAACTAAACGTAAAGCTCTCCCTTCTATTACTCCATCCGGTTCAAGACTTCAAAACAAAGAACTAAAGCTGGATCTTCGAAAAGGTTTTCAAATTGAAAGAAACTCGGTTCAACCGCTCCAACTTGTTCAAACTAGCGATTTGCTCGGATCACATAAGCGCCCTAAATTCGACATACGAAATTTGTCTGCAAAAATAGGCAATACAAGTTCCGGTGCAAACATTACTGACCAGATTTCA GATATTGGGTCAGTTGTTCATATTCTCCCTTCAAATCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACGAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGTGAATGTTCAAGATGGACCGAGATATTATCTGTCTAAGGTGGACGATAATTTCACACATCCCACAAATGACGAAGAGTTTCCTGTAGGCCTTAATGTTGAGGAAGACGGTGTTACAGATGTGAATAATTCGATTTTAGAGTTAAACTGGCCATGTAGTAGATCAGATACGCCTTATTGTCTAACTGATTCTCCTGGTTTGAGTGACGTAATACCTTCAAAGTTAGATGGTGTAACAGATGAAAGTATTTGTGACCTGCTTCTTAACGGTGACTCACAAACTGAACAAGAAGTCGGTAACAACCAGCCTTTCTCAGAATCTACCCTTTCAAAATACAAGAAGGAGCCAATAAGAAAACAACAT AAAATTCAGAATAGACCCCGTTGTATCGCACCTTTTGCTGAAAGCGACCCTCAATTTGTTTCCACAACTCTCCAGGACATTGACAGTCTTCCATGGGAGAAGTATCAAGATAGTGGTTTCGACTTCAATCTCGATGTTGAACAAAATCAAACAGAAAATTCACGCAGTTCTTCAAATGGTCTTATAGTCGGAAATGAAATTATTCCTGTAGAACCCGCTAATTTAAACGCATGTGATGATGTTATCCAGTTCTTGAGGTCAGAAATTCCTGGCAAGAAGTTAAAATCAGATGAACCATTAAAAACTGTTGCGACAACTGAGGCACATGCCTCTACTCAAAATGGTGCTATTGATTTAACAAGTAGTTCATCTGCACCAACTACCTGGAAAGCAAGACTTTCTGCCAACAATCGGCTCACAATATCCTCCTCTCCCAAAGTTAAACGAAAACAAGTGCCAGTTTTGATCCGCAGACAATCAATCACCCCTCTTTCAACTCCTGATTTTTGTGAGGAAGAATTGGAATGATGTACAATAAAATGCTCTTCATTTCATTGTAATTTCTACACAGTAGTTTCCCAAAGAATTTCTTCACGATAAAGATTCGCCAAAGTAATATATAATGAACAGCTTCTACGAAACCATTTTCTCCTCACATAAAAGTTTTCTCGTAAGCTCTGTCATAAACAGCGAGTTTCATGATCATGTTGGATGAATACGAATTTAAAGAACATACACGATTGTTTTTTCTATGAATAACCAAGTTTTAAACATTTCTCCAATGTGTTTATTGATCAGTCTTATCTGTTCATGCAGATTTTAATATATTATGTTTTACGAAGTATCAAAGTGGTGTACCAGATTCTATTAAACAATAATTGA]
[+] EMBL CD168565 [ AGTCATCCTTACTTCATCCGCAATAAAGATATTTTGCTATCGAAAATTCAGAGGCGGACCTCAAACATGTTCTCACCAATAATGGGGTCAAGAAACCAAAGTTTTGGTGTGAAAGTACCTTATGTTCAGGCTAATTCGGGTTTAAATGGTTCCATAAGTGTATCACCCCAAAGACCAATAACTGCCACAGACTTCTTAAGGCTGGCAGAGACTGTACGGCACTTGCGTTGCAATCAGGAGGCTTTAAGTCAACAAATTGGTGTGTTAAGGTCGGAAAATCAGCTTTTGTATCGTGAACTTTCCGATTTACGAGAAC ]
[+] EMBL CD069753 [ AAGCGTGTGCATCGGACAAACTAAACGTAAAGCTCTCCCTTCTATTACTCCATCCGGTTCAAGATTTCAAAACAAAGAACTAAAGCTGGATCTTCGAAAAGGTTTTCAAATTGAAAGAAACTCGGTTCAACCGCTCCAACTTGTTCAAACTAGCGATTTGCTCGGATCACATAAGCGCCCTAAATTCGACATACGAAATTTGTCTGCAAAAATAGGCAATACAAGTTCCGGTGCAAACATTACTGACCAGATTTCA GATATTGGGTCAGTTGTTCATATTCTCCCTTCAAATCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACGAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGTGAATGTTCAAGATGGACCGAGATATTATCTGTCTAAGGTGGACGATAATTTCACACATCCCACAAATGACGAAGAGTTTCCTGTAGGCCTTAATGTTGAGGA ]
[+] EMBL CD069769 [ AAGCGTGTGCATCGGACAAACTAAACGTAAAGCTCTCCCTTCTATTACTCCATCCGGTTCAAGATTTCAAAACAAAGAACTAAAGCTGGATCTTCGAAAAGGTTTTCAAGTTGAAAGAAACTCGGTTCAACCGCTCCAACTTGTTCAAACTAGCGATTTGCTCGGATCACATAAGCGCCCTAAATTCGACATACGAAATTTGTCTGCAAAAATAGGCAATACAAGTTCCGGTGCAAACATTACTGACCAGATTTCA GATATTGGGTCAGTTGTTCATATTCTCCCTTCAAATCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACGAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGTGAATGTTCGAGATGGACCGAGATATTATCTATCTAAGGTGGACGATAATTTCACACATTCCACAAATGACGAAGAGTTTCCTGTA ]
[+] EMBL CD069749 [ AAGCGTGTGCATCGGACAAACTAAACGTAAAGCTCTCCCTTCTATTACTCCATCCGGTTCAAGATTTCAAAACAAAGAACTAAAGCTGGATCTTCGAAAAGGTTTTCAAGTTGAAAGAAACTCGGTTCAACCGCTCCAACTTGTTCAAACTAGCGATTTGCTCGGATCACATAAGCGCCCTAAATTCGACATACGAAATTTGTCTGCAAAAATAGGCAATACAAGTTCCGGTGCAAACATTACTGACCAGATTTCA GATATTGGGTCAGTTGTTCATATTCTCCCTTCAAATCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACGAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGTGAATGTTCGAGATGGACCGAGATATTATCTATCTAAGGTGGACGATAATTTCACACATTCCAAAAATGACGAAGAG ]
[-] EMBL CD111498 [ ATCACATAAGCGCCCTAAATTCGACATACGAAATTGGTCTGCAAAAATAGGCAATACAAGTTCCGGTGCAAACATTACTGACCAGATTTCA GATATTGGGTCAGTTGTTCATATTCTCCCTTCAATTCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACGAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGTGAATGTTCAAGATGGACCGAGATATTATCTGTCTAAGGTGGACGATAATTTCACACATCCCACAAATGACGAAGAGTTTCCTGTAGGCCTTAATGTTGAGGAAGACGGTGTTACAGATGTGAATAATTCGATTTTAGAGTTAAACTGGCCATGTAGTAGATCAGATACGCCTTATTGTCTA ]
[+] EMBL CD069781 [ AGATGTCATGATATTGGGTCAGTTGTTCATATTCTCCCTTCAAATCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACGAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGTGAATGTTCGAGATGGACCGAGATATTATCTATCTAAGGTGGACGATAATTTCACACATCCCACAAATGACGAAGAG TTCCT ]
[+] EMBL CD171579 [ TGGTTGATAAAAATCCTGTGAATGTTCAAGATGGACCGAGATATTATCTATCTAAGGTGGACGATAATTTCACACATCCCACAAATGACGAAGAGTTTCCTGTAGGCCTTAATGTTGAGGAAGACGGTGTTACAGATGTGAATAATTCGATCTTAGAGTTAAACTGGCCATGTAGTAGAACAGAAACGCCTTATTGTCTAACTGATTCTCCTGGTTTGAGTGACGT ]
[+] EMBL CD167496 [ ACAACATGGAAGTTCAGAATAGACCCCGTTGTATCGCACCTTTTGCTGAAAGCGACCCTCAATTTGTTTCCACAACTCTCCAGGACATTGACAGTCTTCCATGGGAGAAGTATCAAGATAGTGGTTTCGACTTCAATCTCGATGTTGAACAAAATCAAACAGAAAATTCACGCAGTTCTTCAAATGGTCTTATAGTCGGAAATGAAATTATTCCTGTAGAACCCGCTAATTTAAACGCATGTGATGATGTTATCCAGTTCTTGAGGTCAGAAATTCCTGGCAAGAAGTTAAAATCAGATGAACCATTAAAAA ]
[+] EMBL CD196591 [ GCAGTTCTTCAAATGGTCTTATAGTCGGAAATGAAATTATTCCTGTAGAACCCGCTAATTTAAACGCATGTGATGATGTTATCCAGTTCTTGAGGTCAGAAATTCCTGGCAAGAAGTTAAAATCAGATGAACCATTAAAAACTGTTGCGACAACTGAGGCACATGCCTCTACTCAAAATGGTGCTATTGATTTAACAAGTAGTTCATCTGCACCAACTACCTGGAAAGCAAGACTTTCTGCCAACAATCGGCTCACAATATCCTCCTCTCCCAAAGTTAAACGAAAACAAGTGCCAGTTTTGACCCGCAGACAATCAATCACCCCTCTTTCAACTCCTGATTTTTGTGAGGAAGAATTGGAATGATGTACAATAAAATGCTCTTCATTTCATTGTAATTTCTACACAGTAGTTTCCCAAAGAATTTCTTCACGATAAAGATTCG ]
consensusID : consensus_10137#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 275 fasta sequence
[AAGTTTAAGTTTGGTTAGTAACTTCGTTCAGCACGGGACAAGTTTTCACATACGTGATGGAAACCGCTTAGCCAAAGAATTACTACCCCTTTATTTCAAACACAACAATTTATCTAGTTTTATAAGGCAGTTAAATATGTGTATGTGACTATCTTTCCTGAGTTTCTTTGCAGATGGTTTTAGAAAAATAAATCGTGTGGATCCATCTCTGCCTCTAAAATCTGACACAGAAGACATGGAATTTAGTCATCCTTACTTCATCCGCAATAAAGATA]
[-] EMBL CD193995 [AAGTTTAAGTTTGGTTAGTAACTTCGTTCAGCACGGGACAAGTTTTCACATACGTGATGGAAACCGCTTAGCCAAAGAATTACTACCCCTTTATTTCAAACACAACAATTTATCTAGTTTTATAAGGCAGTTAAATATGTGTATGTGACTATCTTTCCTGAGTTTCTTTGCAGATGGTTTTAGAAAAATAAATCGTGTGGATCCATCTCTGCCTCTAAAATCTGACACAGAAGACATGGAATTTAGTCATCCTTACTTCATCCGCAATAAAGATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10137#0 TTCTCCATGTTTGTATGCCATGTATGGTTTCACATCTGGACCTCCTGTACAATCTATTCC 60
consensus_10137#1 ----------------------------------TCTGGACCTCCTGTACAATCTATTCC 26
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 TGCGTTTCTGACCAAATTAAAGTTACTGGTGGATGATGAAGAAACAAACGAACTCATATA 120
consensus_10137#1 TGCGTTTCTGACCAAATTAAAGTTACTGGTGGATGATGAAGAAACAAACGAACTCATATA 86
consensus_10137#2 ---------------------------------------AAGTTTAAGTTTGGTTAGTAA 21
* ** * * *
consensus_10137#0 TTGGGATCCGCACGGGACAAGTTTTCACATACGTGATGGAAACCGCTTAGCCAAAGAATT 180
consensus_10137#1 TTGGGATCCGCACGGGACAAGTTTTCACATACGTGATGGAAACCGCTTAGCCAAAGAATT 146
consensus_10137#2 CTTCGTTCAGCACGGGACAAGTTTTCACATACGTGATGGAAACCGCTTAGCCAAAGAATT 81
* * ** ***************************************************
consensus_10137#0 ACTACCCCTTTATTTCAAACACAACAATTTATCTAGTTTTATAAGGCAGTTAAATATGT- 239
consensus_10137#1 ACTACCCCTTTATTTCAAACACAACAATTTATCTAGTTTTATAAGGCAGTTAAATATGT- 205
consensus_10137#2 ACTACCCCTTTATTTCAAACACAACAATTTATCTAGTTTTATAAGGCAGTTAAATATGTG 141
***********************************************************
consensus_10137#0 --------------------------------ATGGTTTTAGAAAAATAAATCGTGTGGA 267
consensus_10137#1 --------------------------------ATGGTTTTAGAAAAATAAATCGTGTGGA 233
consensus_10137#2 TATGTGACTATCTTTCCTGAGTTTCTTTGCAGATGGTTTTAGAAAAATAAATCGTGTGGA 201
****************************
consensus_10137#0 TCCATCTCTGCCTCTAAAATCTGACACAGAAGACATGGAATTTAGTCATCCTTACTTCAT 327
consensus_10137#1 TCCATCTCTGCCTCTAAAATCTGACACAGAAGACATGGAATTTAGTCATCCTTACTTCAT 293
consensus_10137#2 TCCATCTCTGCCTCTAAAATCTGACACAGAAGACATGGAATTTAGTCATCCTTACTTCAT 261
************************************************************
consensus_10137#0 CCGCAATAAAGATATTTTGCTATCGAAAATTCAGAGGCGGACCTCAAACATGTTCTCACC 387
consensus_10137#1 CCGCAATAAAGATATTTTGCTATCGAAAATTCAGAGGCGGACCTCAAACATGTTCTCACC 353
consensus_10137#2 CCGCAATAAAGATA---------------------------------------------- 275
**************
consensus_10137#0 AATAATGGGGTCAAGAAACCAAAGTTTTGGTGTGAAAGTACCTTATGTTCAGGCTAATTC 447
consensus_10137#1 AATAATGGGGTCAAGAAACCAAAGTTTTGGTGTGAAAGTACCTTATGTTCAGGCTAATTC 413
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 GGGTTTAAATGGTTCCATAAGTGTATCACCCCAAAGACCAATAACTGCCACAGACTTCTT 507
consensus_10137#1 GGGTTTAAATGGTTCCATAAGTGTATCACCCCAAAGACCAATAACTGCCACAGACTTCTT 473
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 AAGACTGGCAGAGACTGTACGGCACTTGCGTTGCAATCAGGAGACTTTAAGTCAACAAAT 567
consensus_10137#1 AAGACTGGCAGAGACTGTACGGCACTTGCGTTGCAATCAGGAGACTTTAAGTCAACAAAT 533
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 TAGTGTGTTAAAGTCGGAAAATCAGCTTTTGTATCGTGAACTTTCCGATTTACGAGAACA 627
consensus_10137#1 TAGTGTGTTAAAGTCGGAAAATCAGCTTTTGTATCGTGAACTTTCCGATTTACGAGAACA 593
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 TCACGACAAGCAGTCCCAACTTATCCAAACACTCTTCACATTCCTGTCAGCCTTTGCAAA 687
consensus_10137#1 TCACGACAAGCAGTCCCAACTTATCCAAACACTCTTCACATTCCTGTCAGCCTTTGCAAA 653
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 GGAAGGGAGGTCTGCAAGCGTGTGCATCGGACAAACTAAACGTAAAGCTCTCCCTTCTAT 747
consensus_10137#1 GGAAGGGAGGTCTGCAAGCGTGTGCATCGGACAAACTAAACGTAAAGCTCTCCCTTCTAT 713
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 TACTCCATCCGGTTCAAGACTTCAAAACAAAGAACTAAAGCTGGATCTTCGAAAAGGTTT 807
consensus_10137#1 TACTCCATCCGGTTCAAGATTTCAAAACAAAGAACTAAAGCTGGATCTTCGAAAAGGTTT 773
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 TCAAATTGAAAGAAACTCGGTTCAACCGCTCCAACTTGTTCAAACTAGCGATTTGCTCGG 867
consensus_10137#1 TCAAATTGAAAGAAACTCGGTTCAACCGCTCCAACTTGTTCAAACTAGCGATTTGCTCGG 833
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 ATCACATAAGCGCCCTAAATTCGACATACGAAATTTGTCTGCAAAAATAGGCAATACAAG 927
consensus_10137#1 ATCACATAAGCGCCCTAAATTCGACATACGAAATTTGTCTGCAAAAATAGGCAATACAAG 893
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 TTCCGGTGCAAACATTACTGACCAGATTTCAGATATTGGGTCAGTTGTTCATATTCTCCC 987
consensus_10137#1 TTCCGGTGCAAACATTACTGACCAGATTTCAGATATTGGGTCAGTTGTTCATATTCTCCC 953
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 TTCAAATCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACGGTAAATATATATACTCTTT 1047
consensus_10137#1 TTCAAATCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACG------------------- 994
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 AACTGGTTCATCACCAGAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGT 1107
consensus_10137#1 -----------------AGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGT 1037
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 GAATGTTCAAGATGGACCGAGATATTATCTGTCTAAGGTGGACGATAATTTCACACATCC 1167
consensus_10137#1 GAATGTTCAAGATGGACCGAGATATTATCTGTCTAAGGTGGACGATAATTTCACACATCC 1097
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 CACAAATGACGAAGAGTTTCCTGTAGGCCTTAATGTTGAGGAAGACGGTGTTACAGATGT 1227
consensus_10137#1 CACAAATGACGAAGAGTTTCCTGTAGGCCTTAATGTTGAGGAAGACGGTGTTACAGATGT 1157
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 GAATAATTCGATTTTAGAGTTAAACTGGCCATGTAGTAGATCAGATACGCCTTATTGTCT 1287
consensus_10137#1 GAATAATTCGATTTTAGAGTTAAACTGGCCATGTAGTAGATCAGATACGCCTTATTGTCT 1217
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 AACTGATTCTCCTGGTTTGAGTGACGTAATACCTTCAAAGTTAGATGGTGTAACAGATGA 1347
consensus_10137#1 AACTGATTCTCCTGGTTTGAGTGACGTAATACCTTCAAAGTTAGATGGTGTAACAGATGA 1277
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 AAGTATTTGTGACCTGCTTCTTAACGGTGACTCACAAACTGAACAAGAAGTCGGTAACAA 1407
consensus_10137#1 AAGTATTTGTGACCTGCTTCTTAACGGTGACTCACAAACTGAACAAGAAGTCGGTAACAA 1337
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 CCAGCCTTTCTCAGAATCTACCCTTTCAAAATACAAGAAGGAGCCAATAAGAAAACAACA 1467
consensus_10137#1 CCAGCCTTTCTCAGAATCTACCCTTTCAAAATACAAGAAGGAGCCAATAAGAAAACAACA 1397
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 TAAAATTCAGAATAGACCCCGTTGTATCGCACCTTTTGCTGAAAGCGACCCTCAATTTGT 1527
consensus_10137#1 TAAAATTCAGAATAGACCCCGTTGTATCGCACCTTTTGCTGAAAGCGACCCTCAATTTGT 1457
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 TTCCACAACTCTCCAGGACATTGACAGTCTTCCATGGGAGAAGTATCAAGATAGTGGTTT 1587
consensus_10137#1 TTCCACAACTCTCCAGGACATTGACAGTCTTCCATGGGAGAAGTATCAAGATAGTGGTTT 1517
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 CGACTTCAATCTCGATGTTGAACAAAATCAAACAGAAAATTCACGCAGTTCTTCAAATGG 1647
consensus_10137#1 CGACTTCAATCTCGATGTTGAACAAAATCAAACAGAAAATTCACGCAGTTCTTCAAATGG 1577
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 TCTTATAGTCGGAAATGAAATTATTCCTGTAGAACCCGCTAATTTAAACGCATGTGATGA 1707
consensus_10137#1 TCTTATAGTCGGAAATGAAATTATTCCTGTAGAACCCGCTAATTTAAACGCATGTGATGA 1637
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 TGTTATCCAGTTCTTGAGGTCAGAAATTCCTGGCAAGAAGTTAAAATCAGATGAACCATT 1767
consensus_10137#1 TGTTATCCAGTTCTTGAGGTCAGAAATTCCTGGCAAGAAGTTAAAATCAGATGAACCATT 1697
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 AAAAACTGTTGCGACAACTGAGGCACATGCCTCTACTCAAAATGGTGCTATTGATTTAAC 1827
consensus_10137#1 AAAAACTGTTGCGACAACTGAGGCACATGCCTCTACTCAAAATGGTGCTATTGATTTAAC 1757
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 AAGTAGTTCATCTGCACCAACTACCTGGAAAGCAAGACTTTCTGCCAACAATCGGCTCAC 1887
consensus_10137#1 AAGTAGTTCATCTGCACCAACTACCTGGAAAGCAAGACTTTCTGCCAACAATCGGCTCAC 1817
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 AATATCCTCCTCTCCCAAAGTTAAACGAAAACAAGTGCCAGTTTTGATCCGCAGACAATC 1947
consensus_10137#1 AATATCCTCCTCTCCCAAAGTTAAACGAAAACAAGTGCCAGTTTTGATCCGCAGACAATC 1877
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 AATCACCCCTCTTTCAACTCCTGATTTTTGTGAGGAAGAATTGGAATGATGTACAATAAA 2007
consensus_10137#1 AATCACCCCTCTTTCAACTCCTGATTTTTGTGAGGAAGAATTGGAATGATGTACAATAAA 1937
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 ATGCTCTTCATTTCATTGTAATTTCTACACAGTAGTTTCCCAAAGAATTTCTTCACGATA 2067
consensus_10137#1 ATGCTCTTCATTTCATTGTAATTTCTACACAGTAGTTTCCCAAAGAATTTCTTCACGATA 1997
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 AAGATTCGCCAAAGTAATATATAATGAACAGCTTCTACGAAACCATTTTCTCCTCACATA 2127
consensus_10137#1 AAGATTCGCCAAAGTAATATATAATGAACAGCTTCTACGAAACCATTTTCTCCTCACATA 2057
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 AAAGTTTTCTCGTAAGCTCTGTCATAAACAGCGAGTTTCATGATCATGTTGGATGAATAC 2187
consensus_10137#1 AAAGTTTTCTCGTAAGCTCTGTCATAAACAGCGAGTTTCATGATCATGTTGGATGAATAC 2117
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 GAATTTAAAGAACATACACGATTGTTTTTTCTATGAATAACCAAGTTTTAAACATTTCTC 2247
consensus_10137#1 GAATTTAAAGAACATACACGATTGTTTTTTCTATGAATAACCAAGTTTTAAACATTTCTC 2177
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 CAATGTGTTTATTGATCAGTCTTATCTGTTCATGCAGATTTTAATATATTATGTTTTACG 2307
consensus_10137#1 CAATGTGTTTATTGATCAGTCTTATCTGTTCATGCAGATTTTAATATATTATGTTTTACG 2237
consensus_10137#2 ------------------------------------------------------------
consensus_10137#0 AAGTATCAAAGTGGTGTACCAGATTCTATTAAACAATAATTGA 2350
consensus_10137#1 AAGTATCAAAGTGGTGTACCAGATTCTATTAAACAATAATTGA 2280
consensus_10137#2 -------------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||