cluster # 10153

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Schistosoma mansoni
cluster # 10153 cluster # 10153 Sequences # 14 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10153#0 length = 1656 sequences # 12

consensus_10153#1 length = 479 sequences # 1
consensus_10153#2 length = 293 sequences # 1

consensusID : consensus_10153#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1656
fasta sequence

                              [AAAACTCTGACTCACCACTAGACCAGGTTTACCTTGAAGTCCCGGTGGACCAATATCTCCACGTTCTCCTGCTAATCCAGGTCTTCCATCTAATCCTGGATCTCCTGAATCACCAATTATACCAGGGTCTCCTTGCGAACCTTTTGGACCTGGTATACCTGGCCGCCCAGGTTCACCACGTTCTCCGGGGATTCCAGCTCCAGGTTGACCAGGCAATCCTTTTTCTCCTTTTGGACCTGGGTAACCACGATCTCCTACTGGACCAATATCACCTACATCTCCTTTCACTCCGGTAACGCCAGCGGCCCCTGATACTCCTGGACTACCCTGTTCACCAGGATCACCTGGTTCACCTACAATTCCTTTTATTCCAGCAGGTCCAGGTATTCCTGGAAGTCCTTTTTCACCTCTAATCCCACTATCTCCAGGTTGACCTGGTGGTCCCTCATCACCTGGTTTTCCTTTATCTCCTCTTGGTCCAGGTTCACCTTTAGGTCCACGATCACCTTTTTCAACAGTTAAATTACGACTTTGAATAACATTCACAGTACAATTTCCAGGTTCTCCAGAATCGCCTAATTCACCTTTCAGTCCAGGACGTCCAGGTTGACCTTTTTCACCTTTATCACCAAATCTAACTTCAGCTGTCGCACCTTTGTAACCTTTTTCGCCTAGTATACCTTTAGGACCTTTCTGTCCAGGTAAACCTCGTAAGCCAGGGTCACCCTGTGGTCCTTCTAATCCTCGGTCTCCTTTCTCTCCTGGAGAGCCTATAATACCCTTGATTCCTTTGTCGCCTTTGACTCCATCCACACCCGGATAACCTTTAGGGCCTTTTAGAATTCCAGTGTATTCTGTTCTTGTTTCACCTGGTTCACCTTTGAAACCTTTTGGTCCAGGGAGACCATGTTCACCTTGATCACCTTCATAACCCTGTGAACCCGTACGACCTTGATTCCCAGGAGCACCGCGACTCCCTCGTTCTCCTTTGGCACCATCTCGACCTCGTGGACCTGGAAGACCAGCTGGACCGATATCGCCTTTTTCACCCTTTGCTCCAGGTATACCGGGTCTACACAAACTACATCGTTCTCCAGGTTCACCTTGAGGCCCCATTGGACCTTGTTTTCCATGTTTTCCAGCTAAACCATCCAATCCGCGTTCACCTTTTTCACCTGGTGGACCAGGACGACCAGATCCTTTAGTACCCGGCAATCCACGTTCACCTTTTAAACCCTTTGGACCTTTCGGACCTTGAGGCCCATCATAACCTCTATCTCCAGGATC-ACCCGGCGCACCTCTATGGCCAATACCCGGTTCTCCTTTATCACCCGGTAGTCCATCATCACCTGGACTTCCAGGTAGTCCAGGTAAACCAGTTCGTCCGTCATCACCAGGTGATCCTTTTGGACCCGGTGGACCAGGTGGTCC-AATGGGACAGTCAAATCCAGGGTCACCAACCGGTCCTTGTGGACCAACCAAGCCTTTCAATCCCCTGTCTCCTATGGATCCAGGAATCCCAGGAAATCCCTTCTCTCCAGGTTCTCCGGGTATACCACGTTGTCCAGGTCTCCCAGGTAAAATACCTGTGCATTCTGTAGTACCCCCAGGTTCACCAGGATCTCCAACAAATCCGCGTAGTCCATCTGCCCCTGG]

[+] EMBL CD128963             [AAAACTCTGACTCACCACTAGACCAGGTTTACCTTGAAGTCCCGGTGGACCAATATCTCCACGTTCTCCTGCTAATCCAGGTCTTCCATCTAATCCTGGATCTCCTGAATCACCAATTATACCAGGGTCTCCTTGCGAACCTTTTGGACCTGGTATACCTGGCCGCCCAGGTTCACCACGTTCTCCGGGGATTCCAGCTCCAGGTTGACCAGGCAATCCTTTTTCTCCTTTTGGACCTGGGTAACCACGATCTCCTACTGGACCAATATCACCTACATCTCCTTTCACTCCGGTAACGCCAGCGGCCCCTGATACTCCTGGACTACCCTGTTCACCAGGATCACCTGGTTCACCTACAATTCCTTTTATTCCAGCAGGTCCAGGTATTCCTGGAAGTCCTTTTTCACCTCTAATCCCACTATCTCCAGGTTGACCTGGTGGTCCCTCATCACCTGGTTTTCCTTTATCTCCTCTTGGTCCAGGTTCACCTTTAGGTCCACGATCACCTTTTTCAACAGTTAAATTACGACTTTGAATAACATTCACAGTACAATTTCCAGGTTCTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD063795             [                                                                                                                                                                                                                   GGC AT CTTTTTCTCCTTATGGACCTGGGT ACCACGATCTCCTACTGGACCAATATCACCTACATCTCCTTTCACTCCGGTAACGCCAGCGGCCCCTGATACTCCTGGACTACCCTGTTCACCAGGATCACCTGGTTCACCTACAATTCCTTTTATTCCAGCAGGTCCAGGTATTCCTGGAAGTCCTTTTTCACCTCTAATCCCACTATCTCCAGGTTGACCTGGTGGTCCCTCATCACCTGGTTTTCCTTTATCTCCTCTTGGTCCAGGTTCACCTTTAGGTCCACGATCACCTTTTTCAACAGTTAAATTACGACTTTGAATAACATTCACAGTACAATTTCCAGGTTCTCCAGAATCGCCTAATTCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD201402             [                                                                                                                                                                                                                                                                                                                                                                                                                                       TCCAGGTTGACCTGGTGGTCCCTCATCACCTGGTTTTCCTTTATCTCCTCTTGGTCCAGGTTCACCTTTAGGTCCACGATCACCTTTTTCAACAGTTAAATTACGACTTTGAATAACATTCACAGTACAATTTCCAGGTTCTCCAGAATCGCCTAATTCACCTTTCAGTCCAGGACGTCCAGGTTGACCTTTTTCACCTTTATCACCAAATCTAACTTCAGCTGTCGCACCTTTGTAACCTTTTTCGCCTAGTATACCTTTAGGACCTTTCTGTCCAGGTAAACCTCGTAAGCCAGGGTCACCCTGTGGTCCTTCTAATCCTCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD171130             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTTTGTAACCTTTTTCGCCTAGTATACCTTTAGGACCTTTCTGTCCAGGTAAACCTCGTAAGCCAGGGTCACCCTGTGGTCCTTCTAATCCTCGGTCTCCTTTCTCTCCTGGAGAGCCTATAATACCCTTGATTCCTTTGTCGCCTTTGACTCCATCCACACCCGGATAACCTTTAGGGCCTTTTAGAATTCCAGTGTATTCTGTTCTTGTTTCACCTGGTTCACCTTTGAAACCTTTTGGTCCAGGGAGACCATGTTCACCTTGATCACCTTCATAACCCTGTGAACCCGTACGACCTTGATTCCCAGGAGCACCGCGACTCCCTCGTTCTCCTTTGGCACCATCTCAACCTCGTGGACCTGGAAGACCAGCTGGACCGATATCGCCTTTTTCACCCTTTGCTCCAGGTATACCGGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD196188             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAACCTCGTAAGCCAGGGTCACCCTGTGGTCCTTCTAATCCTCGGTCTCCTTTCTCTCCTGGAGAGCCTATAATACCCTTGATTCCTTTGTCGCCTTTGACTCCATCCACACCCGGATAACCTTTAGGGCCTTTTAGAATTCCAGTGTATTCTGTCCTTGTTTCACCTGGTTCACCTTTGAAACCTTTTGGTCCAGGGAGACCATGTTCACCTTGATCACCTTCATAACCCTGTGAACCCGTACGACCTTGATTCCCAGGAGCACCGCGACTCCCTCGTTCTCCTTTGGCACCATCTCGACCTCGTGGACCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD189004             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATACCCTTGATTCCTTTGTCGCCTTTGACTCCATCCACACCCGGATAACCTTTAGGGCCTTTTAGAATTCCAGTGTATTCTGTCCTTGTTTCACCTGGTTCACCTTTGAAACCTTTTGGTCCAGGGAGACCATGTTCACCTTGATCACCTTCATAACCCTGTGAACCCGTACGACCTTGATTCCCAGGAGCACCGCGACTCCCTCGTTCTCCTTTGGCACCATCTCGACCTCGTGGACCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD181122             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCTTGTTTCACCTGGTTCACCTTTGAAACCTTTTGGTCCAGGGAGACCATGTTCACCTTGATCACCTTCATAACCCTGTGAACCCGTACGACCTTGATTCCCAGGAGCACCGCGACTCCCTCGTTCTCCTTTGGCACCATCTCGACCTCGTGGACCTGGAAGACCAGCTGGACCGATATCGCCTTTTTCACCCTTTGCTCCAGGTATACCGGGTCTACACAAACTACATCGTTCTCCAGGTTCACCTTGAGGCCCCATTGGACCTTGTTTTCCATGTTTTCCAGCTAAACCATCCAATCCGCGTTCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD180935             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TATCGCCTTTTTCACCCTTTGCTCCAGGTATACCGGGTCTACACAAACTACATCGTTCTCCAGGTTCACCTTGAGGCCCCATTGGACCTTGTTTTCCATGTTTTCCAGCTAAACCATCCAATCCACGTTCACCTTTTTCACCTGGTGGACCAGGACGACCAGATCCTTTAGTACCCGGCAATCCACGTTCACCTTTTAAACCCTTTGGACCTTTCGGACCTTGAGGCCCATCATAACCTCTATCTCCAGGATC ACCCGGCGCACCTCTATGGCCAATACCCGGTTCTCCTTTATCACCCGGTAGTCCATCATCACCTGGACTTCCAGGTAGTCCAGGTAAACCAGTTCGTCCGTCATCACCAGGTGAT                                                                                                                                                                                                                                                               ]
[-] EMBL CD180929             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAATCCGCGTTCACCTTTTTCACCTGGTGGACCAGGACGACCAGATCCTTTAGTACCCGGCAATCCACGTTCACCTTTTAAACCCTTTGGACCTTTCGGACCTTGAGGCCCATCATAACCTCTATCTCCAGGATC ACCCGGCGCACCTCTATGGCCAATACCCGGTTCTCCTTTATCACCCGGTAGTCCATCATCACCTGGACTTCCAGGTAGTCCAGGTAAACCAGTTCGTCCGTCATCACCAGGTGATCCTTTTGGACCCGGTGGACCAGGTGGTCC AATGGGACAGTCAAATCCAGGGTCAC                                                                                                                                                                                                       ]
[-] EMBL CD180728             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAATCCGCGTTCACCTTTTTCACCTGGTGGACCAGGACGACCAGATCCTTTAGTACCCGGCAATCCACGTTCACCTTTTAAACCCTTTGGACCTTTCGGACCTTGAGGCCCATCATAACCTCTATCTCCAGGATC ACCCGGCGCACCTCTATGGCCAATACCCGGTTCTCCTTTATCACCCGGTAGTCCATCATCACCTGGACTTCCAGGTAGTCCAGGTAAACCAGTTCGTCCGTCATCACCAGGTGATC                                                                                                                                                                                                                                                              ]
[+] EMBL CD166234             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTCTATGTCCAGGATCTAGCCGGCGCACCTCTATGGCCAATACCCGGTTCTCCTTTATCACCCGGTAGTCCATCATCACCTGGACTTCCAGGTAGTCCAGGTAAACCAGTTCGTCCGTCATCACCAGGTGATCCTTTTGGACCCGGTGGACCAGGTGGTCC AATGGGACAGTCAAATCCAGGGTCACCAACCGGTCCTTGTGGACCAACCAAGCCTTTCAAT                                                                                                                                                                    ]
[-] EMBL CD171416             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  cngaTTCT CTTTATCACCCGGTAGTCCATCATCACCTGGACTTCCAGGTAGTCCAGGTAAACCAGTTCGTCCGTCATCACCAGGTGATCCTTTTGGACCCGGTGGACCAGGTGGTCCAAATGGGACAGTCAAATCCAGGGTCACCAACCGGTCCTTGTGGACCAACCAAGCCTTTCAATCCCCTGTCTCCTATGGATCCAGGAATCCCAGGAAATCCCTTCTCTCCAGGTTCTCCGGGTATACCACGTTGTCCAGGTCTCCCAGGTAAAATACCTGTGCATTCTGTAGTACCCCCAGGTTCACCAGGATCTCCAACAAATCCGCGTAGTCCATCTGCCCCTGG]




>consensus_10153#0
AAAACTCTGACTCACCACTAGACCAGGTTTACCTTGAAGTCCCGGTGGACCAATATCTCC
ACGTTCTCCTGCTAATCCAGGTCTTCCATCTAATCCTGGATCTCCTGAATCACCAATTAT
ACCAGGGTCTCCTTGCGAACCTTTTGGACCTGGTATACCTGGCCGCCCAGGTTCACCACG
TTCTCCGGGGATTCCAGCTCCAGGTTGACCAGGCAATCCTTTTTCTCCTTTTGGACCTGG
GTAACCACGATCTCCTACTGGACCAATATCACCTACATCTCCTTTCACTCCGGTAACGCC
AGCGGCCCCTGATACTCCTGGACTACCCTGTTCACCAGGATCACCTGGTTCACCTACAAT
TCCTTTTATTCCAGCAGGTCCAGGTATTCCTGGAAGTCCTTTTTCACCTCTAATCCCACT
ATCTCCAGGTTGACCTGGTGGTCCCTCATCACCTGGTTTTCCTTTATCTCCTCTTGGTCC
AGGTTCACCTTTAGGTCCACGATCACCTTTTTCAACAGTTAAATTACGACTTTGAATAAC
ATTCACAGTACAATTTCCAGGTTCTCCAGAATCGCCTAATTCACCTTTCAGTCCAGGACG
TCCAGGTTGACCTTTTTCACCTTTATCACCAAATCTAACTTCAGCTGTCGCACCTTTGTA
ACCTTTTTCGCCTAGTATACCTTTAGGACCTTTCTGTCCAGGTAAACCTCGTAAGCCAGG
GTCACCCTGTGGTCCTTCTAATCCTCGGTCTCCTTTCTCTCCTGGAGAGCCTATAATACC
CTTGATTCCTTTGTCGCCTTTGACTCCATCCACACCCGGATAACCTTTAGGGCCTTTTAG
AATTCCAGTGTATTCTGTTCTTGTTTCACCTGGTTCACCTTTGAAACCTTTTGGTCCAGG
GAGACCATGTTCACCTTGATCACCTTCATAACCCTGTGAACCCGTACGACCTTGATTCCC
AGGAGCACCGCGACTCCCTCGTTCTCCTTTGGCACCATCTCGACCTCGTGGACCTGGAAG
ACCAGCTGGACCGATATCGCCTTTTTCACCCTTTGCTCCAGGTATACCGGGTCTACACAA
ACTACATCGTTCTCCAGGTTCACCTTGAGGCCCCATTGGACCTTGTTTTCCATGTTTTCC
AGCTAAACCATCCAATCCGCGTTCACCTTTTTCACCTGGTGGACCAGGACGACCAGATCC
TTTAGTACCCGGCAATCCACGTTCACCTTTTAAACCCTTTGGACCTTTCGGACCTTGAGG
CCCATCATAACCTCTATCTCCAGGATCACCCGGCGCACCTCTATGGCCAATACCCGGTTC
TCCTTTATCACCCGGTAGTCCATCATCACCTGGACTTCCAGGTAGTCCAGGTAAACCAGT
TCGTCCGTCATCACCAGGTGATCCTTTTGGACCCGGTGGACCAGGTGGTCCAATGGGACA
GTCAAATCCAGGGTCACCAACCGGTCCTTGTGGACCAACCAAGCCTTTCAATCCCCTGTC
TCCTATGGATCCAGGAATCCCAGGAAATCCCTTCTCTCCAGGTTCTCCGGGTATACCACG
TTGTCCAGGTCTCCCAGGTAAAATACCTGTGCATTCTGTAGTACCCCCAGGTTCACCAGG
ATCTCCAACAAATCCGCGTAGTCCATCTGCCCCTGG

consensusID : consensus_10153#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 479
fasta sequence

                              [GGAGATCCAGGATTAGATGGAAGACCTGGATTAGCAGGAGAACGTGGAGATATTGGTCCACCGGGACTTCAAGGTGATCCTGGTCCAAGTGGTGGTGCTGGTATCAAGGGAATTATCGGTGATCCAGGAGATAGTGGAGAACCAGGTTTGCCTGGACGTCCTGGTATACCTGGAGATAAAGGCAGATGTCTGGGAGCAGCAGACAAAGGAGAACCTGGACCTCCTGGTCCAGAAGGTCCAGAAGGACAAAAAGGCGAACCTGGATTAAGAGGTGCGAAAGGAGAGCGAGGACCATCAGGTCCAATTGGACGACCAGGTGAAAAAGGTTTAACGGGTGAACCAGGCTTACCTGGACCAGATGGTCCTTCAGGAGATACAGGTCCTCCTGGCCGTCCCGGAACTACTGGTCCTAAAGGCTTTGAAGGAACGACTGCGCCAAAAGGATTTGAAGGACCACCAGGTGGTCCTGGTGATGAAGG]

[+] EMBL CD153788             [GGAGATCCAGGATTAGATGGAAGACCTGGATTAGCAGGAGAACGTGGAGATATTGGTCCACCGGGACTTCAAGGTGATCCTGGTCCAAGTGGTGGTGCTGGTATCAAGGGAATTATCGGTGATCCAGGAGATAGTGGAGAACCAGGTTTGCCTGGACGTCCTGGTATACCTGGAGATAAAGGCAGATGTCTGGGAGCAGCAGACAAAGGAGAACCTGGACCTCCTGGTCCAGAAGGTCCAGAAGGACAAAAAGGCGAACCTGGATTAAGAGGTGCGAAAGGAGAGCGAGGACCATCAGGTCCAATTGGACGACCAGGTGAAAAAGGTTTAACGGGTGAACCAGGCTTACCTGGACCAGATGGTCCTTCAGGAGATACAGGTCCTCCTGGCCGTCCCGGAACTACTGGTCCTAAAGGCTTTGAAGGAACGACTGCGCCAAAAGGATTTGAAGGACCACCAGGTGGTCCTGGTGATGAAGG]




>consensus_10153#1
GGAGATCCAGGATTAGATGGAAGACCTGGATTAGCAGGAGAACGTGGAGATATTGGTCCA
CCGGGACTTCAAGGTGATCCTGGTCCAAGTGGTGGTGCTGGTATCAAGGGAATTATCGGT
GATCCAGGAGATAGTGGAGAACCAGGTTTGCCTGGACGTCCTGGTATACCTGGAGATAAA
GGCAGATGTCTGGGAGCAGCAGACAAAGGAGAACCTGGACCTCCTGGTCCAGAAGGTCCA
GAAGGACAAAAAGGCGAACCTGGATTAAGAGGTGCGAAAGGAGAGCGAGGACCATCAGGT
CCAATTGGACGACCAGGTGAAAAAGGTTTAACGGGTGAACCAGGCTTACCTGGACCAGAT
GGTCCTTCAGGAGATACAGGTCCTCCTGGCCGTCCCGGAACTACTGGTCCTAAAGGCTTT
GAAGGAACGACTGCGCCAAAAGGATTTGAAGGACCACCAGGTGGTCCTGGTGATGAAGG

consensusID : consensus_10153#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 293
fasta sequence

                              [AACCAGGGTCACCTGTGTCCCTTCTATCCTCGGTCTCTTTCTCTCCTGGAGAGCTAATATACCCCTGATCCCTTGTCGCCTNGGACTCCATCCACACCCGATTAACCTTTAGGCCCTTTAGGAATNCCAGTGTATCTGTTCTTGTTTCACCTGGTTCACCTTTGAACCCTTTGGTCCAGGGAGACAATGTTCACCTTGATCACCTTCATAACCCTGTGAACCCGTACGACCTTGATTCCCAGGAGCACCGCGACTCCCTCGTTCTCCTTTGGCACCATCTAGACCTCGTGGAC]

[-] EMBL CD143071             [AACCAGGGTCACCTGTGTCCCTTCTATCCTCGGTCTCTTTCTCTCCTGGAGAGCTAATATACCCCTGATCCCTTGTCGCCTNGGACTCCATCCACACCCGATTAACCTTTAGGCCCTTTAGGAATNCCAGTGTATCTGTTCTTGTTTCACCTGGTTCACCTTTGAACCCTTTGGTCCAGGGAGACAATGTTCACCTTGATCACCTTCATAACCCTGTGAACCCGTACGACCTTGATTCCCAGGAGCACCGCGACTCCCTCGTTCTCCTTTGGCACCATCTAGACCTCGTGGAC]




>consensus_10153#2
AACCAGGGTCACCTGTGTCCCTTCTATCCTCGGTCTCTTTCTCTCCTGGAGAGCTAATAT
ACCCCTGATCCCTTGTCGCCTNGGACTCCATCCACACCCGATTAACCTTTAGGCCCTTTA
GGAATNCCAGTGTATCTGTTCTTGTTTCACCTGGTTCACCTTTGAACCCTTTGGTCCAGG
GAGACAATGTTCACCTTGATCACCTTCATAACCCTGTGAACCCGTACGACCTTGATTCCC
AGGAGCACCGCGACTCCCTCGTTCTCCTTTGGCACCATCTAGACCTCGTGGAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10153#0      AAAACTCTGACTCACCACTAGACCAGGTTTACCTTGAAGTCCCGGTGGACCAATATCTCC 60
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      ------------------------------------------------------------
                                                                                   

consensus_10153#0      ACGTTCTCCTGCTAATCCAGGTCTTCCATCTAATCCTGGATCTCCTGAATCACCAATTAT 120
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      ------------------------------------------------------------
                                                                                   

consensus_10153#0      ACCAGGGTCTCCTTGCGAACCTTTTGGACCTGGTATACCTGGCCGCCCAGGTTCACCACG 180
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      ------------------------------------------------------------
                                                                                   

consensus_10153#0      TTCTCCGGGGATTCCAGCTCCAGGTTGACCAGGCAATCCTTTTTCTCCTTTTGGACCTGG 240
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      ------------------------------------------------------------
                                                                                   

consensus_10153#0      GTAACCACGATCTCCTACTGGACCAATATCACCTACATCTCCTTTCACTCCGGTAACGCC 300
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      ------------------------------------------------------------
                                                                                   

consensus_10153#0      AGCGGCCCCTGATACTCCTGGACTACCCTGTTCACCAGGATCACCTGGTTCACCTACAAT 360
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      ------------------------------------------------------------
                                                                                   

consensus_10153#0      TCCTTTTATTCCAGCAGGTCCAGGTATTCCTGGAAGTCCTTTTTCACCTCTAATCCCACT 420
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      ------------------------------------------------------------
                                                                                   

consensus_10153#0      ATCTCCAGGTTGACCTGGTGGTCCCTCATCACCTGGTTTTCCTTTATCTCCTCTTGGTCC 480
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      ------------------------------------------------------------
                                                                                   

consensus_10153#0      AGGTTCACCTTTAGGTCCACGATCACCTTTTTCAACAGTTAAATTACGACTTTGAATAAC 540
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      ------------------------------------------------------------
                                                                                   

consensus_10153#0      ATTCACAGTACAATTTCCAGGTTCTCCAGAATCGCCTAATTCACCTTTCAGTCCAGGACG 600
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      -------------------------------------------------------GGAGA 5
                                                                                   

consensus_10153#0      TCCAGGTTGACCTTTTTCACCTTTATCACCAAATCTAACTTCAGCTGTCGCACCTTTGTA 660
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      TCCAGGATTAGATGGAAGACCTGGATTAGCAGGAGAACGTGGAGATATTGGTCCACCGGG 65
                                                                                   

consensus_10153#0      ACCTTTT--TCGCCTAGTATACCTTTAGGACCTTTCTGTCCAGGTAAACCTCGTAAGCCA 718
consensus_10153#2      -------------------------------------------------------AACCA 5
consensus_10153#1      ACTTCAAGGTGATCCTGGTCCAAGTGGTGGTGCTGGTATCAAGGGAATTATCGGTGATCC 125
                                                                                 * 

consensus_10153#0      GGGTCACCCTGT-GGTCCTTCTAATCCTCGGTCTCCTTTCTCTCCTGGAGAGCCTATAAT 777
consensus_10153#2      GGGTCACC-TGT-GTCCCTTCTA-TCCTCGGTCTC-TTTCTCTCCTGGAGAGCTAATA-T 60
consensus_10153#1      AGGAGATAGTGGAGAACCAGGTTTGCCTGGACGTCCTGGTATACCTGGAGATAAAGGCAG 185
                        **  *   **  *  **   *   *** *   ** *      ********         

consensus_10153#0      ACCCTTGATTCCTTTGTCGCCTTTGACTCCATCCACACCCGGATAACCTTTAGGGCCTTT 837
consensus_10153#2      ACCCCTGATCCCTT-GTCGCCTNGGACTCCATCCACACCCGATTAACCTTTAGGCCCTTT 119
consensus_10153#1      ATGTCTGGGAGCAG---CAGACAAAGGAGAACCTGGACCTCCTGGTCCAGAAGGTCCAGA 242
                       *    **    *     *            * *   ***       **   *** **   

consensus_10153#0      TAGAATTCCAGTGTATTCTGTTCTTGTTTCACCTGGTTCACCTTTGAAACCTTTTGGTCC 897
consensus_10153#2      AGGAATNCCAGTGTAT-CTGTTCTTGTTTCACCTGGTTCACCTTTGAA-CCCTTTGGTCC 177
consensus_10153#1      AGGACAAAAAGGCGAACCTGGATTAAGAGGTGCGAAAGGAGAGCGAGGACCATCAGGTCC 302
                         **     **   *  ***   *        *      *         ** *  *****

consensus_10153#0      A---GGGAGACCATGTTCACCTTGATCACCTTCATAACCCTGTGAACCCGTACGACCTTG 954
consensus_10153#2      A---GGGAGACAATGTTCACCTTGATCACCTTCATAACCCTGTGAACCCGTACGACCTTG 234
consensus_10153#1      AATTGGACGACCAGGTGAAAAAGGTTTAACGGGTGAACCAGGCTTACCTGGACCAGATGG 362
                       *   **  *** * **  *    * * * *     ****  *   *** * ** *  * *

consensus_10153#0      ATTCCCAGGAGCACCGCGACTCCCTCGTTCTCCTTTGGCACCATCTCGACCTCGTGGACC 1014
consensus_10153#2      ATTCCCAGGAGCACCGCGACTCCCTCGTTCTCCTTTGGCACCATCTAGACCTCGTGGAC- 293
consensus_10153#1      TCCTTCAGGAGATACAGGTCCTCCTGGCCGTCC--CGGAACTA-CTGGTCCTAAAGGCTT 419
                            ******   *  * *  *** *   ***   ** ** * ** * ***   **   

consensus_10153#0      TGGAAGACCAGCTGGACCGATATCGCCTTTT---TCACCCTTTGCTCCAGGTATACCGGG 1071
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      TGAAGGAACGACTGCGCCAAAAGGATTTGAAGGACCACCAGGTGGTCCTGGTGATGAAGG 479
                                                                                   

consensus_10153#0      TCTACACAAACTACATCGTTCTCCAGGTTCACCTTGAGGCCCCATTGGACCTTGTTTTCC 1131
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      ------------------------------------------------------------
                                                                                   

consensus_10153#0      ATGTTTTCCAGCTAAACCATCCAATCCGCGTTCACCTTTTTCACCTGGTGGACCAGGACG 1191
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      ------------------------------------------------------------
                                                                                   

consensus_10153#0      ACCAGATCCTTTAGTACCCGGCAATCCACGTTCACCTTTTAAACCCTTTGGACCTTTCGG 1251
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      ------------------------------------------------------------
                                                                                   

consensus_10153#0      ACCTTGAGGCCCATCATAACCTCTATCTCCAGGATCACCCGGCGCACCTCTATGGCCAAT 1311
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      ------------------------------------------------------------
                                                                                   

consensus_10153#0      ACCCGGTTCTCCTTTATCACCCGGTAGTCCATCATCACCTGGACTTCCAGGTAGTCCAGG 1371
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      ------------------------------------------------------------
                                                                                   

consensus_10153#0      TAAACCAGTTCGTCCGTCATCACCAGGTGATCCTTTTGGACCCGGTGGACCAGGTGGTCC 1431
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      ------------------------------------------------------------
                                                                                   

consensus_10153#0      AATGGGACAGTCAAATCCAGGGTCACCAACCGGTCCTTGTGGACCAACCAAGCCTTTCAA 1491
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      ------------------------------------------------------------
                                                                                   

consensus_10153#0      TCCCCTGTCTCCTATGGATCCAGGAATCCCAGGAAATCCCTTCTCTCCAGGTTCTCCGGG 1551
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      ------------------------------------------------------------
                                                                                   

consensus_10153#0      TATACCACGTTGTCCAGGTCTCCCAGGTAAAATACCTGTGCATTCTGTAGTACCCCCAGG 1611
consensus_10153#2      ------------------------------------------------------------
consensus_10153#1      ------------------------------------------------------------
                                                                                   

consensus_10153#0      TTCACCAGGATCTCCAACAAATCCGCGTAGTCCATCTGCCCCTGG 1656
consensus_10153#2      ---------------------------------------------
consensus_10153#1      ---------------------------------------------