cluster # 10166

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 10166 cluster # 10166 Sequences # 14 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10166#0 length = 1984 sequences # 12

consensus_10166#1 length = 624 sequences # 2

consensusID : consensus_10166#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1984
fasta sequence

                              [CACGTACCCTTATTTGGACGTGAAAAAAATAGGATTGGTCTTTTAAATGGACAGCCAATATCCAGAAGAACTGTGTACTTATCTGCTAGTTCGTCGGATTCTGGTGACTATCCATCAGATGTGGATGATCAAGATTTTTCAGGTATCGTTTACGGAAGTCCTACTTCAAAAGCAGCCACTATTCGTGCTCAGAGAGCTCGTGCTAAACCAATTCTTTCAAATGCTCGTGGACCTGCTATTCTTATTGGTGGGATGACATCGATAAGTTTATGTCGTCGGAACAATAAACAATCAGGTCACAGTATTAGTTCAAAAGGTCGTTCAAAATCCGGCCGTACTTCAAGTAGCAGCGGAGAAAGCATCCGAGGCCACCGTTCCAGTTCATCTGATCGATCTCACTCTAAACGAGGGTCACGTAGTGGATTTCGTCGCCCTAAACACTCTCGTGTAGAATACATTACTACATTTGGTGATAACGAAGACAATGCTGATGATAAACGAAATAATAATGGGAGTTCACGACTTAGTTCAAATAAACAAACATCACTATTTGATCGAAATGGAGGTGGATTGTCTGG-TTCATTTGATTCTAAACCTCCTGGATCAGCTGCATCTGCTGTCGCGGC-TTCTGTTGTTTCCAAGCTACTCAGTTCAACATCACAAACATCAGTAGTCAAGGGTAAAAGTAGTTTTGTCAGTGCATCTGGTTCAAAATCCACAAGAACTGAATCTCACATACGGTCCTCTCCTAGTTTTAGTGATCGAAGAAGACCCCTGCAATCTAGAAGCCGCTACCGCCGTTCCACCTCTCGATCTAGTAGTCGGCGATCACACAGTTCTCGTGGTAGCAGAAACCGTAGGAGATATCATAGCCGAACGCGG-AATAGT-ACAGTAGCAGAAGTTATCGTAGTTCTTACCGGAGGTACAAACGTAGTCCAAACCGATACCGCTCAAGGCACAGATCCTCTTCATCAAGAAGATCGTGCTCTGATTCTAGTACTTCAACTGACAATCGAAAGTCTAACTATGATCGGGTTAGTTCAAATCCGTCTACTAGATCCTTCAATCAAAATCCACTATGTGAACAAAACGCCGTTATTCAACCAAACGTTCAAAAACAACCTTCACCTCCAGTAGGCAAACGATATTATCGTCCTGAGTTAGAATCTGCCGATGAATTTGAATTATCAGACGAGGAACAAAGTGATACTAAAAAAGAATCATCAAAGTCTTCAGATGGAAATTCTGGAAAGCAGTTAACCTCAAGGAGGTCGGATTCAAATTCCTATGGAAATTTCGCGGACTCCTGGAGTTGTTGGTTCGGCAGTCCGTTCTCTTATGCCACAAGAATTATTGAAACGTCGTGTTCAGTCTCAGCTAACTAAAGCCTTCAATGCTGAC-AAAAAAGCCGAATTAGAAAAACAAATTCAATTGGAACGAGAACGTCAGGCTCGAGAAGAAGGACTTCGTCGACAAGCTCGCCTTCTCAGACGTCAAGAAGAAAAACGCTTACGTGCTGAACGACGTGCTATGGCCATAGAGTTGGGATCAGTTCTTGGGAATTCTTCCGACTCTTCATCTCATTCCTCTAGCTCATCAGGTAGTAGTTATCGCAACAGTAGCCGTGCTAGATCTAGACGATTTCAAGCTTCACCAACTCGTCGACAATCATCAATGTATTCTTCTAGTAGTCGAAAATATT------CTCCTCTTCATTCAACATACAGTCGACCTCGAATAGAGTCGGAACGAGGACTTTTAGGCAGTCCAAGTCGTGCTGTAGATGCCAGACTACCCTCTCCCCCATCTAATACAAATCTATGTAATTACCCCAGAGACACACGTGCCCCCACTAATCGGATTCCTCGATCTAGTAATTCATTACTCGGTAGTCCTATTCAAAATCCTTATTCTACTTCAAGAGATCGTGGAAGTGTTTCATCATCATCTCGATTTATCGGGTCCAGGGAAGAACAACGAAGTTACA]

[+] EMBL CD162486             [CACGTACCCTTATTTGGACGTGAAAAAAATAGGATTGGTCTTTTAAATGGACAGCCAATATCCAGAAGAACTGTGTACTTATCTGCTAGTTCGTCGGATTCTGGTGACTATCCATCAGATGTGGATGATCAAGATTTTTCAGGTATCGTTTACGGAAGTCCTACTTCAAAAGCAGCCACTATTCGTGCTCAGAGAGCTCGTGCTAAACCAATTCTTTCAAATGCTCGTGGACCTGCTATTCTTATTGGTGGGATGACATCGATAAGTTTATGTCGTCGGAACAATAAACAATCAGGTCACAGTATTAGTTCAAAAGGTCGTTCAAAATCCGGCCGTACTTCAAGTAGCAGCGGAGAAAGCATCCGAGGCCACCGTTCCAGTTCATCTGATCGATCTCACTCTAAACGAGGGTCACGTAGTGGATTTCGTCGCCCTAAACACTCTCGTGTAGAATACATTACTACATTTGGTGATAACGAAGACAATGCTGATGATAAACGAAATAATAATGGGAGTTCACGACTTAGTTCANATAAACAAACATCACTATTTGATCGAAATGGAGGTGGATTGTCTGG TTCATTTGATTCTAAACCTCCTGGATCAGCTGCATCTGCTGTCGCGGCTTTCTG TGTTTCCAAGCTACTCAGGTCAACATCACAAACAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD094496             [                                                                                                                                                                                                                                                                                                               ATTAGTTCAAAAGGTCGTTCAGAATCTGGCCGTACTTCAAGTAGCAGCGGAGAAAGCATCCGAGGCCACCGTTCCAGTTCATCTGATCGATCTTACTCTAAACGAGGGTCACGTAGTGGATTTCGTCGCCCTAAACACTCTCGTGTAGAATACATTACTACATTTGGTGATAACGAAGACAATGCTGATGATAAACGAAATAATAATGGGAGTTCACGACTTAGTTCAAATAAACAAACATCACTATTTGATCGAAATGGAGGTGGATTGTCTGG TTCATTTGATTCTAAACCTCCTGGATCAGCTGCATCTGCTGTCGCGGC TTCTGTTGTTTCCAAGCTACTCAGTTCAACATCACAAACATCAGTAGTCAAGGGTAAAAGTAGTTTTGTCAGTGCATCTGGTTCAAAATCCACAAGAACTGAATCTCACATACGGTCCTCTCCTAGTTTTAGTGATCGAAGAAGACCCCTGCAATCTAGAAGCCGCTACCGCCGTTCCACCTCTCGATCTAGTAGTCGGCGATCACACAGTTCTCGTGGTAGCAGAAACCGTAGGAGATATCATAGCCGAACGCGGAAATAGT ACAGTAGCAGAAGTTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD095202             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CAAATAAACAAACATCACTATTTGATCGAAATGGAGGTGGA TGTCTGGTTTCATTTGATTCTAAACCTCCTGGATCAGCTGCATCTGCTGTCGCGGC TTCTGTTGTTTCCAAGCTACTCAGTTCAACATCACAAACATCAGTAGTCAAGGGTAAAAGTAGTTTTGTCAGTGCATCTGGTTCAAAATCCACAAGAACTGAATCTCACATACGGTCCTCTCCTAGTTTTAGTGATCGAAGAAGACCCCTGCAATCTAGAAGCCGCTACCGCTGTTCCACCTCTCGATCTAGTAGTCGGCGATCACACAGTTCTCGTGGTAGCAGAAACCGTAGGAGATATCATAGCCGAACGCGG AATAGTAACAGTAGCAGAAGTTATCGTAGTTCTTACCGGAGGTACAAACGTAGTCCAAACCGATACCGCTCAAGGCACAGATCCTCTTCATCAAGAAGATCGTGCTCTGATTCTAGTACTTCAACTGACAATCGAAAGTCTAACTATGATCGGGTTAGTTCAAATCCGTCTACTAGATCCTTCAATCAAAATCCACTATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD095214             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACAAACATCACTATTTGATCGAAATGGAGGTGGATTGTCTGG TTCATTTGATTCTAAACCTCCTGGATCAGCTGCATCTGCTGTCGCGGC TTCTGTTGTTTCCAAGCTACTCAGTTCAACATCACAAACATCAGTAGTCAAGGGTAAAAGTAGTTTTGTCAGTGCATCTGGTTCAAAATCCACAAGAACTGAATCTCACATACGGTCCTCTCCTAGTTTTAGTGATCGAAGAAGACCCCTGCAATCTAGAAGCCGCTACCGCCGTTCCACCTCTCGATCTAGTAGTCGGCGATCACACAGTTCTCGTGGTAGCAGAAACCGTAGGAGATATCATAGCCGAACGCGG AATAGTAACAGTAGCAGAAGTTATCGTAGTTCTTACCGGAGGTACAAACGTAGTCCAAACCGATACCGCTCAAGGCACAGATCCTCTTCATCAAGAAGATCGTGCTCTGATTCTAGTACTTCAACTGACAATCGAAAGTCTAACTATGATCGGGTTAGTTCAAATCCGTCTACTAGATCCTTCAATCAAAATCCACTATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD160396             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTAACTATGATCGGGTTAGTTCAAATCCGTCTACTAGATCCTTCAATCAAAATCCACTATGTGAACAAAACGCCGTTATTCAACCAAACGTTCAAAAACAACCTTCACCTCCAGTAGGCAAACGATATTATCGTCCTGAGTTAGAATCTGCCGATGAATTTGAATTATCAGACGAGGAACAAAGTGATACTAAAAAAGAATCATCAAAGTCTTCAGATGGAAATTCTGGAAAGCAGTTAACCTCAAGGAGGTCGGATTCAAATTCCTATGGAAATTTCGCGGACTCCTGGAGTTGTTGGTTCGGCAGTCCGTTCTCTTATGCCACAAGAATTATTGAAACGTCGTGTTCAGTCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD088360             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AATCATCAAAGTCTTCAGATGGAAATTCTGGAAAGCAGTTAACCTCAAGGAGGTCGGATTCAAATTCCTATGGAAATTTCGCGGACTCCTGGAGTTGTTGGTTCGGCAGTCCGTTCTCTTATGCCACAAGAATTATTGAAACGTCGTGTTCAGTCTCAGCTAACTAAAGCCTTCAATGCTGAC AAAAAAGCCGAATTAGAAAAACAAATTCAATTGGAACGAGAACGTCAGGCTCGAGAAGAAGGACTTCGTCGACAAGCTCGCCTTCTCAGACGTCAAGAAGAAAAACGCTTACGTGCTGAACGACGTGCTATGGCCATAGAGTTGGGATCAGTTCTTGGGAATTCTTCCGACTCTTCATCTCATTCCTCTAGCTCATCAGGTAGTAGTTATCGCAACAGTAGCCGTGCTAGATCTAGACGATTTCAAGCTTCACCAACTCGTCGACAATCATCAATGTATTCTTCTAGTAGTCGAAAATATTCTCCTCCTCCTCTTCATTCAACATACAGTCGACCTCGAATAGAGTCGGAACGAGGACTTTTANGCAGTCCAAGTCGTGCTGTA                                                                                                                                                                                                             ]
[+] EMBL CD066920             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ACCTCAAGGAGGTCGGATTCAAATTCCTATGGAAATTTCGCGGACTCCTGGAGTTGTTGGTTCGGCAGTCCGTTCTCTTATGCCACAAGAATTATTGAAACGTCGTGTTCAGTCTCAGCTAACTAAAGCCTTCAATGCTGACAAAAAAAGCCGAATTAGAAAAACAAATTCAATTGTAACGAGAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD086270             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAAGCTCGCCTTCTCAGACGTCAAGAAGAAAAACGCTTACGTGCTGAACGACGTGCTATGGCCATAGAGTTGGGATCAGTTCTTGGGAATTCTTCCGACTCTTCATCTCATTCCTCTAGCTCATCAGGTAGTAGTTATCGCAACAGTAGCCGTGCTAGATCTAGACGATTTCAAGCTTCACCAACTCGTCGACAATCATCAATGTATTCTTCTAGTAGTCGAAAATATT      CTCCTCTTCATTCAACATACAGTCGACCTCGAATAGAGTCGGAACGAGGACTTTTAGGCAGTCCAAGTCGTGCTGTAGATGCCAGACTACCCTCTCCCCCATCTAATACAAATCTATGTAATTACCCCAGAGACACACGTGCCCCCACTAATCGGATTCCTCGATCTAGTAATTCATTACTCGGTAGTCCTATTCAAAATCCTTATTCTACTTCAAGAGATCGTGGAAGTGTTTCATCATCATCTCGATTTATCGGGTCCAGGGAAGAACAACGAAGTTACA]
[+] EMBL CD086279             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAAGCTCGCCTTCTCAGACGTCAAGAAGAAAAACGCTTACGTGCTGAACGACGTGCTATGGCCATAGAGTTGGGATCAGTTCTTGGGAATTCTTCCGACTCTTCATCTCATTCCTCTAGCTCATCAGGTAGTAGTTATCGCAACAGTAGCCGTGCTAGATCTAGACGATTTCAAGCTTCACCAACTCGTCGACAATCATCAATGTATTCTTCTAGTAGTCGAAAATATT      CTCCTCTTCATTCAACATACAGTCGACCTCGAATAGAGTCGGAACGAGGACTTTTAGGCAGTCCAAGTCGTGCTGTAGATGCCAGACTACCCTCTCCCCCATCTAATACAAATCTATGTAATTACCCCAGAGACACACGTGCCCCCACTAATCGGATTCCTCGATCTAGTAATTCATTACTCGGTAGTCCTATTCAAAATCCTTATTCTACTTCAAGAGATCGTGGAAGTGTTTCATCATCATCTCGATTTATCGGGTCCAGGGAAGAACAACGAAGTTACA]
[-] EMBL CD066850             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCATAGAGTTGGGATCAGTTCTTGGGAATTCTTCCGACTGTTCATCTCATTCCTCTAGCTCATCAGGTAGTAGTTATCGCAACAGTAGCCGTGCTAGATCTAGACGATTTCAAGCTTCACCAACTCGTCGACAATCATCAATGTATTCTTCTAGTAGTCGAAAATATT      CTCCTCTTCATTCAACATACAGTCGACCTCGAATAGAGTCGGAACGAGGACTTTTAGGCAGTCCAAGTCGTGCTGTAGATGCCAGACTACCCTCTCCCCCATCTAATACAAATCTATGTAATTACCCCAGAGACACACGTGCCCCCACTAATCGGATTCCTCGATCTAGTAATTCATT                                                                                                        ]
[-] EMBL CD114389             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GTTGGGATCAGTTCTTGGGAATTCTTCCGACTCTTCATCTCATTCCTCTAGCTCATCAGGTAGCAGTTATCGCAACAGTAGCCGTGTTAGATCTAGACGATTTCAAGCTTCACCAACTCGTCGACAATCATCAATGTATTCTTCTAGTAGTCGAAATTATT      CTCCTCTTCATTCAACATACAGTCGACCTCGAATAGAGTCGGAACGAGGACTTTTAGGCAGTCCAAGTCGTGCTGTAG                                                                                                                                                                                                            ]
[-] EMBL CD068895             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCAAGTCGTGCTGTAGATGCCAGACTACCCTCTCCCCCATCTAATACAAATCTGTGTAATTACCCCAGAGACACACGTGCCCCCACTAATCGGATTCCTCGATCTAGTAATTCATTACTCGGTAGTCCTATTCAAAATCCTTATTCTACTTCAAGAGATCGTGGAAGTGTTTCATCATCATCTCGATT                                ]




>consensus_10166#0
CACGTACCCTTATTTGGACGTGAAAAAAATAGGATTGGTCTTTTAAATGGACAGCCAATA
TCCAGAAGAACTGTGTACTTATCTGCTAGTTCGTCGGATTCTGGTGACTATCCATCAGAT
GTGGATGATCAAGATTTTTCAGGTATCGTTTACGGAAGTCCTACTTCAAAAGCAGCCACT
ATTCGTGCTCAGAGAGCTCGTGCTAAACCAATTCTTTCAAATGCTCGTGGACCTGCTATT
CTTATTGGTGGGATGACATCGATAAGTTTATGTCGTCGGAACAATAAACAATCAGGTCAC
AGTATTAGTTCAAAAGGTCGTTCAAAATCCGGCCGTACTTCAAGTAGCAGCGGAGAAAGC
ATCCGAGGCCACCGTTCCAGTTCATCTGATCGATCTCACTCTAAACGAGGGTCACGTAGT
GGATTTCGTCGCCCTAAACACTCTCGTGTAGAATACATTACTACATTTGGTGATAACGAA
GACAATGCTGATGATAAACGAAATAATAATGGGAGTTCACGACTTAGTTCAAATAAACAA
ACATCACTATTTGATCGAAATGGAGGTGGATTGTCTGGTTCATTTGATTCTAAACCTCCT
GGATCAGCTGCATCTGCTGTCGCGGCTTCTGTTGTTTCCAAGCTACTCAGTTCAACATCA
CAAACATCAGTAGTCAAGGGTAAAAGTAGTTTTGTCAGTGCATCTGGTTCAAAATCCACA
AGAACTGAATCTCACATACGGTCCTCTCCTAGTTTTAGTGATCGAAGAAGACCCCTGCAA
TCTAGAAGCCGCTACCGCCGTTCCACCTCTCGATCTAGTAGTCGGCGATCACACAGTTCT
CGTGGTAGCAGAAACCGTAGGAGATATCATAGCCGAACGCGGAATAGTACAGTAGCAGAA
GTTATCGTAGTTCTTACCGGAGGTACAAACGTAGTCCAAACCGATACCGCTCAAGGCACA
GATCCTCTTCATCAAGAAGATCGTGCTCTGATTCTAGTACTTCAACTGACAATCGAAAGT
CTAACTATGATCGGGTTAGTTCAAATCCGTCTACTAGATCCTTCAATCAAAATCCACTAT
GTGAACAAAACGCCGTTATTCAACCAAACGTTCAAAAACAACCTTCACCTCCAGTAGGCA
AACGATATTATCGTCCTGAGTTAGAATCTGCCGATGAATTTGAATTATCAGACGAGGAAC
AAAGTGATACTAAAAAAGAATCATCAAAGTCTTCAGATGGAAATTCTGGAAAGCAGTTAA
CCTCAAGGAGGTCGGATTCAAATTCCTATGGAAATTTCGCGGACTCCTGGAGTTGTTGGT
TCGGCAGTCCGTTCTCTTATGCCACAAGAATTATTGAAACGTCGTGTTCAGTCTCAGCTA
ACTAAAGCCTTCAATGCTGACAAAAAAGCCGAATTAGAAAAACAAATTCAATTGGAACGA
GAACGTCAGGCTCGAGAAGAAGGACTTCGTCGACAAGCTCGCCTTCTCAGACGTCAAGAA
GAAAAACGCTTACGTGCTGAACGACGTGCTATGGCCATAGAGTTGGGATCAGTTCTTGGG
AATTCTTCCGACTCTTCATCTCATTCCTCTAGCTCATCAGGTAGTAGTTATCGCAACAGT
AGCCGTGCTAGATCTAGACGATTTCAAGCTTCACCAACTCGTCGACAATCATCAATGTAT
TCTTCTAGTAGTCGAAAATATTCTCCTCTTCATTCAACATACAGTCGACCTCGAATAGAG
TCGGAACGAGGACTTTTAGGCAGTCCAAGTCGTGCTGTAGATGCCAGACTACCCTCTCCC
CCATCTAATACAAATCTATGTAATTACCCCAGAGACACACGTGCCCCCACTAATCGGATT
CCTCGATCTAGTAATTCATTACTCGGTAGTCCTATTCAAAATCCTTATTCTACTTCAAGA
GATCGTGGAAGTGTTTCATCATCATCTCGATTTATCGGGTCCAGGGAAGAACAACGAAGT
TACA

consensusID : consensus_10166#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 624
fasta sequence

                              [AATCATC-AAGTCTTCAGATGGAANTT-TGG-AAGCAGTTACCTTCAAGGAGGTCGGATTCAAATTCCTATGGAAATTTCGCGGGTAAGATGACGTCTCAACAGTTGGTCACGGGTGGTCCTAGTCCAAGCCACGATTT-AAAACTCCCTGGAGTTGTTGGTTCGGCAGTCCGTTCTCTTATGCCACAAGAATTATTGAAACGTCGTGTTCAGTCTCAGCTAACTAAAGCCTTCAATGCTGACAAAANAGCCGAATTAGAAAAACAAATTC-AATTGGAACGAGAACGTCAGGCTCGAGAAGAAGGACTTCGTCGACAAGCTCGCCTTCTCAGACGTCAAGAAGAAAAACGCTTACGTGCTGAACGACGTGCTATGGCCATAGAGTTGGGATCAGTTCTTGGGAATTCTTCCGACTCTTCATCTCATTCCTCTAGCTCATCAGGTAGTAGTTATCGCAACAGTAGCCGTGCTAGATCTAGACGATTTCAAGCTTCACCAACTCGTCGACAATCATCAATGTATTCTTCTAGTAGTCGAAAATATTCTCCTCCTCCTCTTCATTCAACATACAGTCGACCTCGAATAGAGTCGGAACGAGGACTTTTAGGCAGTCCAAGTCGTGCTGTAG]

[-] EMBL CD144836             [AATCATC AAGTCTTCAGATGGAANTT TGG AAGCAGTTACCTTCAAGGAGGTCGGATTCAAATTCCTATGGAAATTTCGCGGGTAAGATGACGTCTCAACAGTTGGTCACGGGTGGTCCTAGTCCAAGCCACGATTT AAAACTCCCTGGAGTTGTTGGTTCGGCAGTCCGTTCTCTTATGCCACAAGAATTATTGAAACGTCGTGTTCAGTCTCAGCTAACTAAAGCCTTCAATGCTGACAAAANAGCCGAATTAGAAAAACAAATTC AATTGGAACGAGAACGTCAGGCTCGAGAAGAAGGACTTCGTCGACAAGCTCGCCTTCTCAGACGTCAAGAAGAAAAACGCTTACGTGCTGAACGACGTGCTATGGCCATAGAGTTGGGATCAGTTCTTGGGAATTCTTCCGACTCTTCATCTCATTCCTCTAGCTCATCAGGTAGTAGTTATCGCAACAGTAGCCGTGCTAGATCTAGACGATTTCAAGCTTCACCAACTCGTCGACAATCATCAATGTATTCTTCTAGTAGTCGAAAATATTCTCCTCCTCCTCTTCATTCAACATACAGTCGACCTCGAATAGAGTCGGAACGAGGACTTTTAGGCAGTCCAAGTCGTGCTGTAG]
[+] EMBL CD195880             [   CATCAAAGTCTTCAGATGGAAATTCTGGAAAGCAGTTAACCTCAAGGAGGTCGGATTCAAATTCCTATGGAAATTTCGCGGGTAAGATGACGTCTCAACAGTTGGTCACGGGTGGTCCTAGTCCAAGCCACGATTTAAAAACT CCTGGAGTTGTTGGTTCGGCAGTCCGTTCTCTTATGCCACAAGAATTATTGAAACGTCGTGTTCAGTCTCAGCTAACTAAAGCCTTCAATGCTGACAAAAAAGCCGAATTAGAAAAACAAATTCAAATTGG ACGAGAACGTCAGGCTCGAGAAGAAGGA                                                                                                                                                                                                                                                                                                                                  ]




>consensus_10166#1
AATCATCAAGTCTTCAGATGGAANTTTGGAAGCAGTTACCTTCAAGGAGGTCGGATTCAA
ATTCCTATGGAAATTTCGCGGGTAAGATGACGTCTCAACAGTTGGTCACGGGTGGTCCTA
GTCCAAGCCACGATTTAAAACTCCCTGGAGTTGTTGGTTCGGCAGTCCGTTCTCTTATGC
CACAAGAATTATTGAAACGTCGTGTTCAGTCTCAGCTAACTAAAGCCTTCAATGCTGACA
AAANAGCCGAATTAGAAAAACAAATTCAATTGGAACGAGAACGTCAGGCTCGAGAAGAAG
GACTTCGTCGACAAGCTCGCCTTCTCAGACGTCAAGAAGAAAAACGCTTACGTGCTGAAC
GACGTGCTATGGCCATAGAGTTGGGATCAGTTCTTGGGAATTCTTCCGACTCTTCATCTC
ATTCCTCTAGCTCATCAGGTAGTAGTTATCGCAACAGTAGCCGTGCTAGATCTAGACGAT
TTCAAGCTTCACCAACTCGTCGACAATCATCAATGTATTCTTCTAGTAGTCGAAAATATT
CTCCTCCTCCTCTTCATTCAACATACAGTCGACCTCGAATAGAGTCGGAACGAGGACTTT
TAGGCAGTCCAAGTCGTGCTGTAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10166#0      CACGTACCCTTATTTGGACGTGAAAAAAATAGGATTGGTCTTTTAAATGGACAGCCAATA 60
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      TCCAGAAGAACTGTGTACTTATCTGCTAGTTCGTCGGATTCTGGTGACTATCCATCAGAT 120
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      GTGGATGATCAAGATTTTTCAGGTATCGTTTACGGAAGTCCTACTTCAAAAGCAGCCACT 180
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      ATTCGTGCTCAGAGAGCTCGTGCTAAACCAATTCTTTCAAATGCTCGTGGACCTGCTATT 240
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      CTTATTGGTGGGATGACATCGATAAGTTTATGTCGTCGGAACAATAAACAATCAGGTCAC 300
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      AGTATTAGTTCAAAAGGTCGTTCAAAATCCGGCCGTACTTCAAGTAGCAGCGGAGAAAGC 360
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      ATCCGAGGCCACCGTTCCAGTTCATCTGATCGATCTCACTCTAAACGAGGGTCACGTAGT 420
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      GGATTTCGTCGCCCTAAACACTCTCGTGTAGAATACATTACTACATTTGGTGATAACGAA 480
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      GACAATGCTGATGATAAACGAAATAATAATGGGAGTTCACGACTTAGTTCAAATAAACAA 540
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      ACATCACTATTTGATCGAAATGGAGGTGGATTGTCTGGTTCATTTGATTCTAAACCTCCT 600
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      GGATCAGCTGCATCTGCTGTCGCGGCTTCTGTTGTTTCCAAGCTACTCAGTTCAACATCA 660
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      CAAACATCAGTAGTCAAGGGTAAAAGTAGTTTTGTCAGTGCATCTGGTTCAAAATCCACA 720
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      AGAACTGAATCTCACATACGGTCCTCTCCTAGTTTTAGTGATCGAAGAAGACCCCTGCAA 780
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      TCTAGAAGCCGCTACCGCCGTTCCACCTCTCGATCTAGTAGTCGGCGATCACACAGTTCT 840
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      CGTGGTAGCAGAAACCGTAGGAGATATCATAGCCGAACGCGGAATAGTACAGTAGCAGAA 900
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      GTTATCGTAGTTCTTACCGGAGGTACAAACGTAGTCCAAACCGATACCGCTCAAGGCACA 960
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      GATCCTCTTCATCAAGAAGATCGTGCTCTGATTCTAGTACTTCAACTGACAATCGAAAGT 1020
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      CTAACTATGATCGGGTTAGTTCAAATCCGTCTACTAGATCCTTCAATCAAAATCCACTAT 1080
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      GTGAACAAAACGCCGTTATTCAACCAAACGTTCAAAAACAACCTTCACCTCCAGTAGGCA 1140
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      AACGATATTATCGTCCTGAGTTAGAATCTGCCGATGAATTTGAATTATCAGACGAGGAAC 1200
consensus_10166#1      ---AATCATCAAGTCTTCAGATGGAANTTTGGAAGCAGTT---ACCTTCAA--GGAGGTC 52
                           **  *   *** * ** * ***  *    *  * **   *   ***   *  *  *

consensus_10166#0      AAAGTGATACTAAAAAAGAATCATCAAAGTCTTCAGATGGAAATTCTGGAAAGCAGTTAA 1260
consensus_10166#1      GGATTCAAATTCCTATGGAAATTTCGCGGG--TAAGATGACGTCTC-----AACAGTTGG 105
                         * * * * *   *  ***   **   *   * *****     **     * *****  

consensus_10166#0      CCTCAAGGAGGTCGGATTCAAATTCCTATGGAAATTTCGCGGACTCCTGGAGTTGTTGGT 1320
consensus_10166#1      TCACGGGTGGTCCTAGTCCAAGCCACGATTTAAAACTC-------CCTGGAGTTGTTGGT 158
                        * *  *  *  *   * ***    * **  ***  **       ***************

consensus_10166#0      TCGGCAGTCCGTTCTCTTATGCCACAAGAATTATTGAAACGTCGTGTTCAGTCTCAGCTA 1380
consensus_10166#1      TCGGCAGTCCGTTCTCTTATGCCACAAGAATTATTGAAACGTCGTGTTCAGTCTCAGCTA 218
                       ************************************************************

consensus_10166#0      ACTAAAGCCTTCAATGCTGACAAAAAAGCCGAATTAGAAAAACAAATTCAATTGGAACGA 1440
consensus_10166#1      ACTAAAGCCTTCAATGCTGACAAAANAGCCGAATTAGAAAAACAAATTCAATTGGAACGA 278
                       ************************* **********************************

consensus_10166#0      GAACGTCAGGCTCGAGAAGAAGGACTTCGTCGACAAGCTCGCCTTCTCAGACGTCAAGAA 1500
consensus_10166#1      GAACGTCAGGCTCGAGAAGAAGGACTTCGTCGACAAGCTCGCCTTCTCAGACGTCAAGAA 338
                       ************************************************************

consensus_10166#0      GAAAAACGCTTACGTGCTGAACGACGTGCTATGGCCATAGAGTTGGGATCAGTTCTTGGG 1560
consensus_10166#1      GAAAAACGCTTACGTGCTGAACGACGTGCTATGGCCATAGAGTTGGGATCAGTTCTTGGG 398
                       ************************************************************

consensus_10166#0      AATTCTTCCGACTCTTCATCTCATTCCTCTAGCTCATCAGGTAGTAGTTATCGCAACAGT 1620
consensus_10166#1      AATTCTTCCGACTCTTCATCTCATTCCTCTAGCTCATCAGGTAGTAGTTATCGCAACAGT 458
                       ************************************************************

consensus_10166#0      AGCCGTGCTAGATCTAGACGATTTCAAGCTTCACCAACTCGTCGACAATCATCAATGTAT 1680
consensus_10166#1      AGCCGTGCTAGATCTAGACGATTTCAAGCTTCACCAACTCGTCGACAATCATCAATGTAT 518
                       ************************************************************

consensus_10166#0      TCTTCTAGTAGTCGAAAATATTCTCCTC------TTCATTCAACATACAGTCGACCTCGA 1734
consensus_10166#1      TCTTCTAGTAGTCGAAAATATTCTCCTCCTCCTCTTCATTCAACATACAGTCGACCTCGA 578
                       ****************************      **************************

consensus_10166#0      ATAGAGTCGGAACGAGGACTTTTAGGCAGTCCAAGTCGTGCTGTAGATGCCAGACTACCC 1794
consensus_10166#1      ATAGAGTCGGAACGAGGACTTTTAGGCAGTCCAAGTCGTGCTGTAG-------------- 624
                       **********************************************              

consensus_10166#0      TCTCCCCCATCTAATACAAATCTATGTAATTACCCCAGAGACACACGTGCCCCCACTAAT 1854
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      CGGATTCCTCGATCTAGTAATTCATTACTCGGTAGTCCTATTCAAAATCCTTATTCTACT 1914
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      TCAAGAGATCGTGGAAGTGTTTCATCATCATCTCGATTTATCGGGTCCAGGGAAGAACAA 1974
consensus_10166#1      ------------------------------------------------------------
                                                                                   

consensus_10166#0      CGAAGTTACA 1984
consensus_10166#1      ----------