cluster # 10350

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Schistosoma mansoni
cluster # 10350 cluster # 10350 Sequences # 15 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10350#0 length = 1617 sequences # 12
consensus_10350#1 length = 700 sequences # 1

consensus_10350#2 length = 307 sequences # 1
consensus_10350#3 length = 278 sequences # 1

consensusID : consensus_10350#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1617
fasta sequence

                              [ATCCTGGTACGAGGACTATTTAAAAACTCTCACTTCTATTTCTTCATTATTCAAATATGTTTCGCCTTGAAATTGTCTGCAAGTTATTCCACTTTATGCGTTTGCCAAACGAAGAAATGGAAGTATTTTCTAAACCAACATTATTCACTCGAGTCTTCGCTCTTTCAATAAGAAATATGAGTTCTACAAATCAACAACCAAAGCATAAAATTCTTATCGTAGGTGGAGGTGCAGGTGGTTGTGCAATGGCTAATCGTTTATGTAAACATTTTGAAAAGAATGAAGTTGCTGTTATAGAGCCCTCTGCAACTCATTATTATCAACCTTTATGGACACTTGTTGGTGCTGGCATTAAACCTTTAAAAGAATCAGTCCAACCTTTAGAAAAAGTTTTAACATCAAAAGCCAAATTGTATAAGGAT-AAATTACACATATTGAACCAAAAGAATCTTATGTTGTATTATCAAATGGAGATAAAATATCATATGAATATTTAATC-TTGGCCCTTGGTATAACTT-TACGTTATGATAAGGTTATTGGAGCTGAAGAAGCATTGAAAAATGATCCACGTGTTTGTTCAAATTATTCTACAGATTATGTA-GAAAAAACTTATAAAGCTTATCAAAATTTCAATGGGG-GAAATGCTGTGTTCACATTACCAGCTGGACCAATTAAATGCGCTGGTGCACCACAAAAAGTTATGTACCTATTTGAAGATTACATGAAAAGGTCTGGTAAAAAGATTTTGGCAAATATTCATTATTTTACTGCTACTAACAAATTGTTCTCAGTGGATAAATATTCAGAAAATTTAACTGAAATTTGTAAAAAACGAAATATCAATTGTAATTTATCATACAATTTAGTTGAAGTAGATTCACAAGCTAGTGAAGCAGTATTTCAACACATGGAAACTAAAGAACTTAAACGAATTAAATATGACTTTTTACATATCACTCCACCAATGTGTTGTCCAGAAATTTTAACTAAAACACCAAAATTGACTAATCCA-AAAT-GTGTGACTATGTAGATGTCAATGTGAAAACTTTACGACATAATCATTATGATAATATATTTGC-CCTTGGTGATTGTGCTGCATTGCCCACATCGAAAACTGCCGCAGCTGTATCTAGTCAGGCGGCAACATTAGAAAAGAATCTATGCGATGTTATCAAAGGTGGTCAAGGAAATGTTTCTGAATATGATGGATATACAGCTTGTCCTATAGTTACTGGGTATAATCGTGGTATTATAGCAGAATTTGATTATAGAGCTAAACCATTAGAAACATTACCTATTGATCAAGGAAAAGAACGTTATATATTCTATTTTATGAAAACATACATTCTACCACCACTTTATTGGGATGGACTTTTAAAAGGAATATGGTCTGGTCCAAAATCTATTCGAAATCTGCTTCATTTACATCGACCTTCATATTCCGATCCACAGAAATGATCTGAAGAAAAATAATAATTCACTGACATTTTCTATGTATTCTTCTTCTTCTTCATCATCATCATGAAAGTGTGTGTGTGTATGTATGTGTATGTCTGTGTATGTGCCTATTATGTAATGGATCATTTCTAAAACATCTACATATTTTGTTCTCATTGC]

[+] EMBL CD082069             [ATCCTGGTACGAGGACTATTTAAAAACTCTCACTTCTATTTCTTCATTATTCAAATATGTTTCGCCTTGAAATTGTCTGCAAGTTATTCCACTTTATGCGTTTGCCAAACGAAGAAATGGAAGTATTTTCTAAACCAACATTATTCACTCGAGTCTTCGCTCTTTCAATAAGAAATATGAGTTCTACAAATCAACAACCAAAGCATAAAATTCTTATCGTAGGTGGAGGTGCAGGTGGTTGTGCAATGGCTAATCGTTTATGTAAACATTTTGAAAAGAATGAAGTTGCTGTTATAGAGCCCTCTGCAACTCATTATTATCAACCTTTATGGACACTTGTTGGTGCTGGCATTAAACCTTTAAAAGAATCAGTCCAACCTTTAGAAAAAGTTTTAACATCAAAAGCCAAATTGTATAAGGATAAAATTACACATATTGAACCAAAAGAATCTTATGTTGTATTATCAAATGGAGATAAAATATCATATGAATATTTAATC TTGGCCCTTGGTATAACTT TACGTTATGATAAGGTTATTGGAGCTGAAGAAGCATTGAAAAATGATCCACGTGTTTGTTCAAATTATTCTACAGATTATGTA GAAAAAACTTATAAAGCTTATCAAAATTTCAATGGGG GAAATGCTGTGTTCACATTACCAGCTGGACCAATTAAATGCGCTGGTGCACCACAAAAAAGTATGTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL SM144                [                                                                                                                                                                                                                                                  GCAATGGCTAATCGTTTATGTAAACATTTTGAAAAGAATGANGTTGCTGTTATAGAGCCCTCTGCAACTCATTATTATCAACCTTTATGGACACTTGTTGGTGCTGGCATTAAACCTTTAAAAGAATCAGTCCAACCTTTAGAAAAAGTTTTAACATCAAANGCCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD069133             [                                                                                                                                                                                                                                                                                                                                                                        TAAAAGAATCAGTCCAACCTTTAGAAAAGGTTTTAACATCAAAAGCCAAATTGTATAAGGAT AAATTACACATATTGAACCAAAAGAATCTTATGTTGTATTATCAAATGGAGATAAAATATCATATGAATATTTAATC TTGGCCCTTGGTATAACTT TACGTTATGATAAGGTTATTGGAGCTGAAGAAGCATTGAAAAATGATCCACGTGTTTGTTCAAATTATTCTACAGATTATGTA GCAGAAACTTATAAAGCTTATCAAAATTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD069105             [                                                                                                                                                                                                                                                                                                                                                                        TAAAAGAATCAGTCCAACCTTTAGAAAAGGTTTTAACATCAAAAGCCAAATTGTATAAGGAT AAATTACACATATTGAACCAAAAGAATCTTATGTTGTATTATCAAATGGAGATAAAATATCATATGAATATTTAATCGTTGGCCCTTGGTATAACTTGTACGTTATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD082387             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ccTGTTTGTTCAAATTATTCTACAGATTATGTATTAAAAAACTTATAAAGCTCATCAAAATTTCAATGGGGAGAAATGCTGTGTTCACATTACCAGCTGGACCAATTAAATGCGCTGGTGCACCACAAAAAGTTATGTACCTATTTGAAGATTACATGAAAAGGTCTGGTAAAAAGATTTTGGCAAATATTCATTATTTTACTGCTACTAACAAATTGTTCTCAGTGGATAAATATTCAGAAAATTTAACTGAAATTTGTAAAAAACGAAATATCAATTGTAATTTATCATACAATTTAGTTGAAGTAGATTCACAAGCTAGTGAAGCAGTATTTCAACACATGGAAACTAAAGAACTTAAACGAATTAAATATGACTTTTTACATATCACTCCACCAATGTGTTGTCCAGAAATTTTAACTAAAACACCAAAATTGACTAATCCA AAATCGTGTGACTATGTAGATGTCAATGTGAAAACTTTACGACATAATCATTATGATAATATATTTGC CCTTGGTGATTGTGCTGCATTGCCCACATCGAAAACTGCCGCAGCTGTATCTAGTCAGGCGGCAACATTAGAAAAGAATCTATGCGATGTTATCAAAGGTGGTCAAGGAAATGTTTCTGAATATGA                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AI975230             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGTTTGTTCAAATTATTCTACAGATTATGTA GAAAAAACTTATAAAGCTTATCAAAATTTCAATGGGG GAGATGCTGTGTTCACATTACCAGCTGGACCAATTAAATGCGCTGGTGCACCACAAAAAGTTATGTACCTATTTGAAGATTACATGAAAAGGTCTGGTAAAAAGATTTTGGCAAATATTCATTATTTTACTGCTACTAACAAATTGTTCTCAGTGGATAAATATTCAGAAAATTTAACTGAAATTTGTAAAAAACGAAATATCAATTGTAATTTATCATACAATTTAGTTGAAGTAGATTCACAAGCTAGTGAAGCAGTATTTCAACACATGGAAACTAAAGAACTTAAACGAATTAAATATGACTTTTTACATATCACTCCACCAATGTGTTGTCCAGAAATTTTAACTAAAACACCAAAATTGACTAATCCANNAAT GTGTGACTATGTAGATGTCAATGTGAAAACTTTACGACATAATCATTATGATAATATATTTGCNCCTTGGTGATTGTGCTGCATTGCCCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BF936291             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGTTTGTTCAAATTATTCTACACATTATGTT GAAAAAACTTATAAAGCTTATCAAAATTTCAATGGGG GAGATGCTGTGTTCACATTACCAGCTTGACCAATTAAATGCGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD076052             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CACATCGAAAACTGCCGCAGCTGTATCTAGTCAGGCGGCAACATTAGAAAAGAATCTATGCGATGTTATCAAAGGTGGTCAAGGAAATGTTTCTGAATATGATGGATATACAGCTTGTCCTATAGTTACTGGGTATAATCGTGGTATTATAGCAGAATTTGATTATAGAGCTAAACCATTAGAAACATTACCTATTGATCAAGGAAAAGAACGTTATATATTCTATTTTATGAAAACATACATTCTACCACCACTTTATTGGGATGGACTTTTAAAAGGAATATGGTCTGGTCCAAAATCTATTCGAAATCTGCTTCATTTACATCGACCTTCATATTCCGATCCACAGAAATGATCTGAAGAAAAATAATAATTCACTGACATTTTCTATGTATTCTTCTTCTTCTTCATCATCATCATGAAAGTGTGTGTGTGTATGTATGTGTATGTCTGTGTATGTGCCTATTATGTAATGGATCATTTCTAAAACATCTACATATTTTGTTCTCATTGC]
[-] EMBL CD075989             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTAGTCAGGCGGCAACATTAGAAAAGAATCTATGCGATGTTATCAAAGGTGGTCAAGGAAATGTTTCTGAATATGATGGATATACAGCTTGTCCTATAGTTACTGGGTATAATCGTGGTATTATAGCAGAATTTGATTATAGAGCTAAACCATTAGAAACATTACCTATTGATCAAGGAAAAGAACGTTATATATTCTATTTTATGAAAACATACATTCTACCACCACTTTATTGGGATGGACTTTTAAAAGGAATATGGTCTGGTCCAAAATCTATTCGAAATCTGCTTCATTTACATCGACCTTCATATTCCGATCCACAGAAATGATCTGAAGAAAAATAATAATTCACTGACATTTTCTATGTATTCTTCTTCTTCTTCATCATCATCATGAAAGTGTGTGTGTGTATGTATGTGTATGTCTGTGTATGTGCCTATTATGTAATGGATCATTTCTAAAACATCTACATATTTTGTTCTCATTGC]
[-] EMBL CD075684             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAAGAATCTATGCGATGTTATCAAAGGTGGTCAAGGAAATGTTTCTGAATATGATGGATATACAGCTTGTCCTATAGTTACTGGGTATAATCGTGGTATTATAGCAGAATTTGATTATAGAGCTAAACCATTAGAAACATTACCTATTGATCAAGGAAAAGAACGTTATATATTCTATTTTATGAAAACATACATTCTACCACCACTTTATTGGGATGGACTTTTAAAAGGAATATGGTCTGGTCCAAAATCTATTCGAAATCTGCTTCATTTACATCGACCTTCATATTCCGATCCACAGAAATGATTTGAAGAAAAATAATAATTCACTGACATTTTCTATGTATTCTTCTTCTTCTTCATCATCATCATGAAAGTGTGTGTGTGTATGTATGTGTATGTCTGTGTATGTGCCTATTATGTAATGGATCATTTCTAAAACATCTACATATTTTGTTCTCATTGC]
[-] EMBL AI976070             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            aGAATATGGTCTGGTCCANAATCTATTCGAAATCTGCTTCATTTACATCGACCTTCATATTCCGATCCACAGAAATGATCTGAAGAAAAATAATAATTCACTGACATTTTCTATGTATTCTTCTTCTTCTTCATCATCATCATGAAAGTGTGTGTGTGTATGTATGTGTATGTCTGTGTATGTGCCTATTATGTAATGGATCATTTCTAAAACATCTACATATTTTGTTCTCATTGC]
[-] EMBL SM143                [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCTTCTTCTTCTTCATCATCATCATGAAAGTGTGTGTGTGTATGTATGTGTATGCCTGTGTATGTGCCNATTATGTAATGGNTCATTTCTAAAACATCTACATATTTTGTTCCCATTGC]




>consensus_10350#0
ATCCTGGTACGAGGACTATTTAAAAACTCTCACTTCTATTTCTTCATTATTCAAATATGT
TTCGCCTTGAAATTGTCTGCAAGTTATTCCACTTTATGCGTTTGCCAAACGAAGAAATGG
AAGTATTTTCTAAACCAACATTATTCACTCGAGTCTTCGCTCTTTCAATAAGAAATATGA
GTTCTACAAATCAACAACCAAAGCATAAAATTCTTATCGTAGGTGGAGGTGCAGGTGGTT
GTGCAATGGCTAATCGTTTATGTAAACATTTTGAAAAGAATGAAGTTGCTGTTATAGAGC
CCTCTGCAACTCATTATTATCAACCTTTATGGACACTTGTTGGTGCTGGCATTAAACCTT
TAAAAGAATCAGTCCAACCTTTAGAAAAAGTTTTAACATCAAAAGCCAAATTGTATAAGG
ATAAATTACACATATTGAACCAAAAGAATCTTATGTTGTATTATCAAATGGAGATAAAAT
ATCATATGAATATTTAATCTTGGCCCTTGGTATAACTTTACGTTATGATAAGGTTATTGG
AGCTGAAGAAGCATTGAAAAATGATCCACGTGTTTGTTCAAATTATTCTACAGATTATGT
AGAAAAAACTTATAAAGCTTATCAAAATTTCAATGGGGGAAATGCTGTGTTCACATTACC
AGCTGGACCAATTAAATGCGCTGGTGCACCACAAAAAGTTATGTACCTATTTGAAGATTA
CATGAAAAGGTCTGGTAAAAAGATTTTGGCAAATATTCATTATTTTACTGCTACTAACAA
ATTGTTCTCAGTGGATAAATATTCAGAAAATTTAACTGAAATTTGTAAAAAACGAAATAT
CAATTGTAATTTATCATACAATTTAGTTGAAGTAGATTCACAAGCTAGTGAAGCAGTATT
TCAACACATGGAAACTAAAGAACTTAAACGAATTAAATATGACTTTTTACATATCACTCC
ACCAATGTGTTGTCCAGAAATTTTAACTAAAACACCAAAATTGACTAATCCAAAATGTGT
GACTATGTAGATGTCAATGTGAAAACTTTACGACATAATCATTATGATAATATATTTGCC
CTTGGTGATTGTGCTGCATTGCCCACATCGAAAACTGCCGCAGCTGTATCTAGTCAGGCG
GCAACATTAGAAAAGAATCTATGCGATGTTATCAAAGGTGGTCAAGGAAATGTTTCTGAA
TATGATGGATATACAGCTTGTCCTATAGTTACTGGGTATAATCGTGGTATTATAGCAGAA
TTTGATTATAGAGCTAAACCATTAGAAACATTACCTATTGATCAAGGAAAAGAACGTTAT
ATATTCTATTTTATGAAAACATACATTCTACCACCACTTTATTGGGATGGACTTTTAAAA
GGAATATGGTCTGGTCCAAAATCTATTCGAAATCTGCTTCATTTACATCGACCTTCATAT
TCCGATCCACAGAAATGATCTGAAGAAAAATAATAATTCACTGACATTTTCTATGTATTC
TTCTTCTTCTTCATCATCATCATGAAAGTGTGTGTGTGTATGTATGTGTATGTCTGTGTA
TGTGCCTATTATGTAATGGATCATTTCTAAAACATCTACATATTTTGTTCTCATTGC

consensusID : consensus_10350#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 700
fasta sequence

                              [CTCGAGGGCCAAAATTCGGCACGAGGTAAAAAACGAAATATCAATTGTAATTTATCATACAATTTAGTTGAAGTAGATTCACAAGCTAGTGAAGCAGTATTTCAACACATGGAAACTAAAGAACTTAAACGAATTAAATATGACTTTTTACATATCACTCCACCAATGTGTTGTCCAGAAATTTTAACTAAAACACCAAAATTGACTAATCCAAAATCGTGTGACTATGTAGATGTCAATGTGAAAACTTTACGACATAATCATTATGATAATATATTTGCCCTTGGTGATTGTGCTGCATTGCCCACATCGAAAACTGCCGCAGCTGTATCTAGTCAGGCGGCAACATTAGAAAAGAATCTATGCGATGTTATCAAAGGTGGTCAAGGAAATGTTTCTGAATATGATGGATATACAGCTTGTCCTATAGTTACTGGGTATAATCGTGGTATTATAGCAGAATTTGATTATAGAGCTAAACCATTAGAAACATTACCTATTGATCAAGGAAAAGAACGTTATATATTCTATTTTATGAAAACATACATTCTACCACCACTTTATTGGGATGGACTTTTAAAAGGAATATGGTCTGGTCCAAAATCTATTCGAAATCTGCTTCATTTACATCGACCTTCATATTCCGATCCACAGAAATGATCTGAAGAANAAATATATTCACTGACATTNTCTATGTATT]

[+] EMBL CD082454             [CTCGAGGGCCAAAATTCGGCACGAGGTAAAAAACGAAATATCAATTGTAATTTATCATACAATTTAGTTGAAGTAGATTCACAAGCTAGTGAAGCAGTATTTCAACACATGGAAACTAAAGAACTTAAACGAATTAAATATGACTTTTTACATATCACTCCACCAATGTGTTGTCCAGAAATTTTAACTAAAACACCAAAATTGACTAATCCAAAATCGTGTGACTATGTAGATGTCAATGTGAAAACTTTACGACATAATCATTATGATAATATATTTGCCCTTGGTGATTGTGCTGCATTGCCCACATCGAAAACTGCCGCAGCTGTATCTAGTCAGGCGGCAACATTAGAAAAGAATCTATGCGATGTTATCAAAGGTGGTCAAGGAAATGTTTCTGAATATGATGGATATACAGCTTGTCCTATAGTTACTGGGTATAATCGTGGTATTATAGCAGAATTTGATTATAGAGCTAAACCATTAGAAACATTACCTATTGATCAAGGAAAAGAACGTTATATATTCTATTTTATGAAAACATACATTCTACCACCACTTTATTGGGATGGACTTTTAAAAGGAATATGGTCTGGTCCAAAATCTATTCGAAATCTGCTTCATTTACATCGACCTTCATATTCCGATCCACAGAAATGATCTGAAGAANAAATATATTCACTGACATTNTCTATGTATT]




>consensus_10350#1
CTCGAGGGCCAAAATTCGGCACGAGGTAAAAAACGAAATATCAATTGTAATTTATCATAC
AATTTAGTTGAAGTAGATTCACAAGCTAGTGAAGCAGTATTTCAACACATGGAAACTAAA
GAACTTAAACGAATTAAATATGACTTTTTACATATCACTCCACCAATGTGTTGTCCAGAA
ATTTTAACTAAAACACCAAAATTGACTAATCCAAAATCGTGTGACTATGTAGATGTCAAT
GTGAAAACTTTACGACATAATCATTATGATAATATATTTGCCCTTGGTGATTGTGCTGCA
TTGCCCACATCGAAAACTGCCGCAGCTGTATCTAGTCAGGCGGCAACATTAGAAAAGAAT
CTATGCGATGTTATCAAAGGTGGTCAAGGAAATGTTTCTGAATATGATGGATATACAGCT
TGTCCTATAGTTACTGGGTATAATCGTGGTATTATAGCAGAATTTGATTATAGAGCTAAA
CCATTAGAAACATTACCTATTGATCAAGGAAAAGAACGTTATATATTCTATTTTATGAAA
ACATACATTCTACCACCACTTTATTGGGATGGACTTTTAAAAGGAATATGGTCTGGTCCA
AAATCTATTCGAAATCTGCTTCATTTACATCGACCTTCATATTCCGATCCACAGAAATGA
TCTGAAGAANAAATATATTCACTGACATTNTCTATGTATT

consensusID : consensus_10350#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 307
fasta sequence

                              [AGACAAACGCAAAATAACGTTTGTAGGAATTTAAAGCCTTCACTTTGTTGTCGTGGTTGAAATAACGTACCTATTTAAAAACTCTCACTTCTATTTCTTCATTATTCAAATATGTTTCGCCTTGAAATTGTCTGCAAGTTATTCCACTTTATGCGTTTGCCAAACGAAGAAATATATGGATACTACACAGATGGAAGTATTTTCTAAACCAACATTATTCACTCGAGTCTTCGCTCTTTCAATAAGAAATATGAGTTGTACAAATCAACAACCAAAGCATAAAATTCTTATCGTAGGTGGAGGTGCA]

[-] EMBL CD154893             [AGACAAACGCAAAATAACGTTTGTAGGAATTTAAAGCCTTCACTTTGTTGTCGTGGTTGAAATAACGTACCTATTTAAAAACTCTCACTTCTATTTCTTCATTATTCAAATATGTTTCGCCTTGAAATTGTCTGCAAGTTATTCCACTTTATGCGTTTGCCAAACGAAGAAATATATGGATACTACACAGATGGAAGTATTTTCTAAACCAACATTATTCACTCGAGTCTTCGCTCTTTCAATAAGAAATATGAGTTGTACAAATCAACAACCAAAGCATAAAATTCTTATCGTAGGTGGAGGTGCA]




>consensus_10350#2
AGACAAACGCAAAATAACGTTTGTAGGAATTTAAAGCCTTCACTTTGTTGTCGTGGTTGA
AATAACGTACCTATTTAAAAACTCTCACTTCTATTTCTTCATTATTCAAATATGTTTCGC
CTTGAAATTGTCTGCAAGTTATTCCACTTTATGCGTTTGCCAAACGAAGAAATATATGGA
TACTACACAGATGGAAGTATTTTCTAAACCAACATTATTCACTCGAGTCTTCGCTCTTTC
AATAAGAAATATGAGTTGTACAAATCAACAACCAAAGCATAAAATTCTTATCGTAGGTGG
AGGTGCA

consensusID : consensus_10350#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 278
fasta sequence

                              [CGGCACGAGGAGTAGATTCACAAGCTAGTGAAGCAGTATTTCAACACATGGAAACTAAAGAACTTAAACGAATTAAATATGACTTTTTACATATCACTCCACCAATGTGTTGTCCAGAAATTTTAACTAAAACACCAAAATTGACTAATCCAAAATCGTGTGACTATGTAGATGTCAATGTGAAAACTTTACGACATAATCATTATGATAATATATTTGCCCTTGGTGATTGTGGTGCATTGCCCACATCGAAAACTGCCGCAGCTGTATCTAGTCAG]

[+] EMBL CD077721             [CGGCACGAGGAGTAGATTCACAAGCTAGTGAAGCAGTATTTCAACACATGGAAACTAAAGAACTTAAACGAATTAAATATGACTTTTTACATATCACTCCACCAATGTGTTGTCCAGAAATTTTAACTAAAACACCAAAATTGACTAATCCAAAATCGTGTGACTATGTAGATGTCAATGTGAAAACTTTACGACATAATCATTATGATAATATATTTGCCCTTGGTGATTGTGGTGCATTGCCCACATCGAAAACTGCCGCAGCTGTATCTAGTCAG]




>consensus_10350#3
CGGCACGAGGAGTAGATTCACAAGCTAGTGAAGCAGTATTTCAACACATGGAAACTAAAG
AACTTAAACGAATTAAATATGACTTTTTACATATCACTCCACCAATGTGTTGTCCAGAAA
TTTTAACTAAAACACCAAAATTGACTAATCCAAAATCGTGTGACTATGTAGATGTCAATG
TGAAAACTTTACGACATAATCATTATGATAATATATTTGCCCTTGGTGATTGTGGTGCAT
TGCCCACATCGAAAACTGCCGCAGCTGTATCTAGTCAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10350#1      ------------------------------------------------------------
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      ATCCTGGTACGAGGACTATTTAAAAACTCTCACTTCTATTTCTTCATTATTCAAATATGT 60
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      ------------------------------------------------------------
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      TTCGCCTTGAAATTGTCTGCAAGTTATTCCACTTTATGCGTTTGCCAAACGAAGAAATGG 120
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      ------------------------------------------------------------
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      AAGTATTTTCTAAACCAACATTATTCACTCGAGTCTTCGCTCTTTCAATAAGAAATATGA 180
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      ------------------------------------------------------------
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      GTTCTACAAATCAACAACCAAAGCATAAAATTCTTATCGTAGGTGGAGGTGCAGGTGGTT 240
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      ------------------------------------------------------------
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      GTGCAATGGCTAATCGTTTATGTAAACATTTTGAAAAGAATGAAGTTGCTGTTATAGAGC 300
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      ------------------------------------------------------------
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      CCTCTGCAACTCATTATTATCAACCTTTATGGACACTTGTTGGTGCTGGCATTAAACCTT 360
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      ------------------------------------------------------------
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      TAAAAGAATCAGTCCAACCTTTAGAAAAAGTTTTAACATCAAAAGCCAAATTGTATAAGG 420
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      ------------------------------------------------------------
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      ATAAATTACACATATTGAACCAAAAGAATCTTATGTTGTATTATCAAATGGAGATAAAAT 480
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      ------------------------------------------------------------
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      ATCATATGAATATTTAATCTTGGCCCTTGGTATAACTTTACGTTATGATAAGGTTATTGG 540
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      ------------------------------------------------------------
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      AGCTGAAGAAGCATTGAAAAATGATCCACGTGTTTGTTCAAATTATTCTACAGATTATGT 600
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      ------------------------------------------------------------
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      AGAAAAAACTTATAAAGCTTATCAAAATTTCAATGGGGGAAATGCTGTGTTCACATTACC 660
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      ------------------------------------------------------------
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      AGCTGGACCAATTAAATGCGCTGGTGCACCACAAAAAGTTATGTACCTATTTGAAGATTA 720
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      ------------------------------------------------------------
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      CATGAAAAGGTCTGGTAAAAAGATTTTGGCAAATATTCATTATTTTACTGCTACTAACAA 780
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      -------------------CTCGAGGGCCAAAATTCGGCACGAGGTAAAAAACGAAATAT 41
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      ATTGTTCTCAGTGGATAAATATTCAGAAAATTTAACTGAAATTTGTAAAAAACGAAATAT 840
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      CAATTGTAATTTATCATACAATTTAGTTGAAGTAG-ATTCACAAGCTAGTGAAGCAGT-A 99
consensus_10350#3      ------------------CGGCACGA--GGAGTAG-ATTCACAAGCTAGTGAAGCAGT-A 38
consensus_10350#0      CAATTGTAATTTATCATACAATTTAGTTGAAGTAG-ATTCACAAGCTAGTGAAGCAGT-A 898
consensus_10350#2      ------------------AGACAAACGCAAAATAACGTTTGTAGGAATTTAAAGCCTTCA 42
                                                     * **   **   * *    * ****  * *

consensus_10350#1      TTTCAACA-CATGG--AAACTAAAGAACTTAAACGAATTAAATATGACTTTTTACATATC 156
consensus_10350#3      TTTCAACA-CATGG--AAACTAAAGAACTTAAACGAATTAAATATGACTTTTTACATATC 95
consensus_10350#0      TTTCAACA-CATGG--AAACTAAAGAACTTAAACGAATTAAATATGACTTTTTACATATC 955
consensus_10350#2      CTTTGTTGTCGTGGTTGAAATAACGTACCTATTTAAA--AACTCTCACTTCTATTTCTTC 100
                        **      * ***   ** *** * ** **    **  ** * * **** *      **

consensus_10350#1      ACTCCACCAATGTGTT--GTCCAGAAATTTTAACTAAAACACCAAAATTGACTAATCCAA 214
consensus_10350#3      ACTCCACCAATGTGTT--GTCCAGAAATTTTAACTAAAACACCAAAATTGACTAATCCAA 153
consensus_10350#0      ACTCCACCAATGTGTT--GTCCAGAAATTTTAACTAAAACACCAAAATTGACTAATCCAA 1013
consensus_10350#2      ATTATTCAAATATGTTTCGCCTTGAAATTGTCTGCAAGTTATTCCACTTTATGCGTTTGC 160
                       * *   * *** ****  * *  ****** *    **   *    * ** *    *    

consensus_10350#1      -AATCGTGTGACTATGTAGATGTCA---ATGTGAAAAC-TTTACGACATAATCATTAT-- 267
consensus_10350#3      -AATCGTGTGACTATGTAGATGTCA---ATGTGAAAAC-TTTACGACATAATCATTAT-- 206
consensus_10350#0      -AAT-GTGTGACTATGTAGATGTCA---ATGTGAAAAC-TTTACGACATAATCATTAT-- 1065
consensus_10350#2      CAAACGAAGAAATATATGGATACTACACAGATGGAAGTATTTTCTAAACCAACATTATTC 220
                        **  *    * *** * ***   *   *  ** **   *** * * *  * ******  

consensus_10350#1      GATAATATATTTGCCCTT--GGTGATTGTGCTGCATTGCCCACATCGAAAACTGCCGCAG 325
consensus_10350#3      GATAATATATTTGCCCTT--GGTGATTGTGGTGCATTGCCCACATCGAAAACTGCCGCAG 264
consensus_10350#0      GATAATATATTTGCCCTT--GGTGATTGTGCTGCATTGCCCACATCGAAAACTGCCGCAG 1123
consensus_10350#2      ACTCGAGTCTTCGCTCTTTCAATAAGAAATATGAGTTGTACAAATCAACAACCAAAGCAT 280
                         *    * ** ** ***    * *      **  ***  ** *** * ***    *** 

consensus_10350#1      CTGTATCTAGTCAGGCGGCAACATTAGAAAAGAATCTATGCGATGTTATCAAAGGTGGTC 385
consensus_10350#3      CTGTATCTAGTCAG---------------------------------------------- 278
consensus_10350#0      CTGTATCTAGTCAGGCGGCAACATTAGAAAAGAATCTATGCGATGTTATCAAAGGTGGTC 1183
consensus_10350#2      AAAATTCTTATCGTAGGTGGAGGTGCA--------------------------------- 307
                            ***  **                                                

consensus_10350#1      AAGGAAATGTTTCTGAATATGATGGATATACAGCTTGTCCTATAGTTACTGGGTATAATC 445
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      AAGGAAATGTTTCTGAATATGATGGATATACAGCTTGTCCTATAGTTACTGGGTATAATC 1243
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      GTGGTATTATAGCAGAATTTGATTATAGAGCTAAACCATTAGAAACATTACCTATTGATC 505
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      GTGGTATTATAGCAGAATTTGATTATAGAGCTAAACCATTAGAAACATTACCTATTGATC 1303
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      AAGGAAAAGAACGTTATATATTCTATTTTATGAAAACATACATTCTACCACCACTTTATT 565
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      AAGGAAAAGAACGTTATATATTCTATTTTATGAAAACATACATTCTACCACCACTTTATT 1363
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      GGGATGGACTTTTAAAAGGAATATGGTCTGGTCCAAAATCTATTCGAAATCTGCTTCATT 625
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      GGGATGGACTTTTAAAAGGAATATGGTCTGGTCCAAAATCTATTCGAAATCTGCTTCATT 1423
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      TACATCGACCTTCATATTCCGATCCACAGAAATGATCTGAAGAANAAATATA-TTCACTG 684
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      TACATCGACCTTCATATTCCGATCCACAGAAATGATCTGAAGAAAAATAATAATTCACTG 1483
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      ACATTNTCTATGTATT-------------------------------------------- 700
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      ACATTTTCTATGTATTCTTCTTCTTCTTCATCATCATCATGAAAGTGTGTGTGTGTATGT 1543
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      ------------------------------------------------------------
consensus_10350#3      ------------------------------------------------------------
consensus_10350#0      ATGTGTATGTCTGTGTATGTGCCTATTATGTAATGGATCATTTCTAAAACATCTACATAT 1603
consensus_10350#2      ------------------------------------------------------------
                                                                                   

consensus_10350#1      --------------
consensus_10350#3      --------------
consensus_10350#0      TTTGTTCTCATTGC 1617
consensus_10350#2      --------------