cluster # 10374

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Schistosoma mansoni
cluster # 10374 cluster # 10374 Sequences # 15 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10374#0 length = 1654 sequences # 8
consensus_10374#1 length = 440 sequences # 3

consensus_10374#2 length = 407 sequences # 2
consensus_10374#3 length = 335 sequences # 1
consensus_10374#4 length = 260 sequences # 1

consensusID : consensus_10374#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1654
fasta sequence

                              [AATTCCATTGATCATCGAAGATGGAAGGGTACAATAACAGACCATTTCCTCATGCAACTGCGCCTACCCAGGCGATAACTTCCGGACAAACCCTAGTTAGCGCACCTGTCTTGGGATCACAAACTGTAACTAGTCAGCCTCCATTGTCACATATGCCAGCGAAAGCATCGCATCCAACATCAGTCTCCCAAATCCCTTCTCGCCTGATTTCTGGCCATCTTCATCATCCACATGCTCCTACACATCCTAGTCAAAGCAGTTTCCACCAGTCAAATCATCCTTTACCACAGCCAGGTTCTCAACATCATGTGATGGGCCATTCTAATCTCCCTCAAGGAAGTGGCGTACTTCGACAGCAGACTAAAGAACCGGCTTATCACCCACAGGTTGAAGCCATATCCCCTGCTCCTGATGAATCTCGTCTAGTGGATGCCCAGGATGCAAAGCTTCATCGTGAAAGGGAAGAAATTAACCGTCAGCTGACAGTATTAGATGCTGATATTAATAAACAAGAATCCCATCTCAGAAATCTGTGTGAGCGAGAGGCTCGTTTAATAGCTCGACTTGCGGTAGCACCTACACGCGATACATCGAACAATAATTTGAAACAGT-ACGATCATGAAAGTAAATCAAATAAAGGGGATCTTGCTGTTCCGGAAGTATCTTTCACTTGTAAAACCGGTTTTGAACGAAATTACGAAAACCCAATACAGGCAATTATTTCTGACAACCGTCAACGTACTCGTCAGCGTCATCTCATTTTCACAAGACTTTGTGGTCCCAAAGTTAGACCTGGACCACATGCCCTGCCATTTTATCGCCAACCATCCGACTTGTCAAGTGTAAGGGCTATACAATCCAACTTTCGCAACCATTTCCGTCCAAAACTTGTTGTTTATCTTCGAAGACGTCTCCGTGCCGAACAAAGTCGTATCAATTTTTTGGCTCAACAATACGGACGAAATTCTAGAGTATTTACCAAAAAGATGGACAAATTACTCAGTACGACCAAACGACGTCAACGTGATCTTCGTCATCGAGATATTTTTGAGAAAGTGATGCCGGAAGTTAAGAAAAATCGCGAAGACAGGGAAATGGGAAACACTGAATACGCCAAACCAGGGGTCGATGATGATTCTGGCGGGGTTTCTAACCTAAATGATGGTTCTCAGACTACTCCCTACGATGCTATAGAAGAGATGAATAAATTAAAGGAATATGCAATTGATCCTCCAGTTATGCTTGCACCTTGGCAGCGTCGATATCAATTCATATGTGAATCAGGTTTAATCACAGACTGTCGTGCTCAGCTTCAAGAAAATCAAGATCTGTCTAAGTGGTCGGAAGAGGAAAAGCAAATATTTAAGGAGCGCTATTTAGCCACTCCTAAGAATTTTACTTCGATAGCTTCATACTTAGAGCGTAAATCTGTTGCAGACTGTATCCACTATTACTATTTATCCAAAAAGAAAGAAGGTTATAAACAGCTGTTGAAGAAGCATAACGCTCGTCGACGCCGAGCAGCTCAGACAGAACGTGCAGGAGGGGGTGGTGGTACTGGAGGAGCTTCTAGCAATTCAAATGCTGGCGGGAGTAGCGGTAGTCATGGTAGTAGTAGTAGTAACAACTCAAATATGAACACTATCCCTCCATC]

[+] EMBL CD178227             [AATTCCATTGATCATCGAAGATGGAAGGGTACAATAACAGACCATTTCCTCATGCAACTGCGCCTACCCAGGCGATAACTTCCGGACAAACCCTAGTTAGCGCACCTGTCTTGGGATCACAAACTGTAACTAGTCAGCCTCCATTGTCACATATGCCAGCGAAAGCATCGCATCCAACATCAGTCTCCCAAATCCCTTCTCGCCTGATTTCTGGCCATCTTCATCATCCACATGCTCCTACACATCCTAGTCAAAGCAGTTTCCACCAGTCAAATCATCCTTTACCACAGCCAGGTTCTCAACATCATGTGATGGGCCATTCTAATCTCCCTCAAGGAAGTGGCGTACTTCGACAGCAGACTAAAGAACCGGCTTATCACCCACAGGTTGAAGCCATATCCCCTGCTCCTGATGAATCTCGTCTAGTGGATGCCCAGGATGCAAAGCTTCATCGTGAAAGGGAAGAAATTAACCGTCAGCTGACAGTATTAGATGCTGATATTAATAAACAAGAATCCCATCTCAGAAATCTGTGTGAGCGAGAGGCTCGTTTAATAGCTCGACTTGCGGTAGCACCTACACGCGATACATCGAACAATAATTTGAAACAGT ACGATCATGAAAGTAAATCAAATAAAGGGGATCTTGCTGTTCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD160707             [                                                                                                                                                                                                                                                                                                                                                                                                           ATATCCCCTGCTCCTGATGAATCTCGTCTAGTGGATGCCCAGGATGCAAAGCTTCATCGTGAAAGGGAAGAAATTAACCGTCAGCTGACAGTATTAGATGCTGATATTAATAAACAAGAATCCCATCTCAGAAATCTGTGTGAGCGAGAGGCTCGTTTAATAGCTCGACTTGCGGTAGCACCTACACGCGATACATCAAACAATAATTTG AACAGTAACGATCATGAAAGTAAATCAAATAAAGGGGATCTTGCTGTTCCGGAAGTATCTTTCACTTGTAAAACCGGTTTTGAACGAAATTACGAAAACCCAATACAGGCAATTATTTCTGACAACCGTCAACGTACTCGTCAGCGTCATCTCATTTTCACAAGACTTTGTGGTCCCAAAGTTAGACCTGGACCACATGCCCTGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD114086             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CAATACAGGCAATTA TTCTGACAACCGTCAACGTACTCGTCAGCGTCATCTCATTTTCACAAGACTTTGTGGTCCCAAAGTTAGACCTGGACCACATGCCCTGCCATTTTATCGCCAACCATCCGACTTGTCAAGTGTAAGGGCTATACAATCCAACTTTCGCAACCATTTCCGTCCAAAACTTGTTGTTTATCTTCGAAGACGTCTCCGTGCCGAACAAAGTCGTATCAATTTTTTGGCTCAACAATACGGACGAAATTCTAGAGTATTTACCAAAAAGATGGACAAATTACTCAGTACGACCAAACGACGTCAACGTGATCTTCGTCATCGAGATATTTTTGAGAAAGTGATGCCGGAAGTTAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD198006             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TAGACCTGGACCACATGCCCTGCCATTNTATCGCCAACCATCCGACTTGTCAAGTGTAAGGGCTATACAATCCAACTTTCGCAACCATTTCCGTCCAAAACTCGTTGTTTATCTTCGAAGACGTCTCCGTGCTGAACAAAGTCGTATCAATTTTTTGGCTCAACAATACGGACGAAATTCTAGAGTATTTACCAAAAAGATGGACAAATTACTCAGTACGACCAAACGACGTCAACGTGATCTTCGTCATCGAGATATTTTTGAGAAAGTGATGCCGGAAGTTAAGAAAAATCGCGAAGACAGGGAAATGGGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD125753             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACCAANNAGATGGACAAATTACTCAGTACGACCAAACGACGTCAACGTGATCTTCGTCATCGAGATATTTTTGAGAAAGTGATGCCGGAAGTTAAGAAAAATCGCGAAGACAGGGAAATGGGAAACACTGAATACGCCAAACCAGGGGTCGATGATGATTCTGGCGGGGTTTCTAACCTAAATGATGGTTCTCAGACTACTCCCTACGATGCTATAGAAGAGATGAATAAATTAAAGGAATATGCAATTGATCCTCCAGTTATGCTTGCACCTTGGCAGCGTCGATATCAATTCATATGTGAATCAGGTTTAATCACAGACTGTCGTGCTCAGCTTCAAGAAAATCAAGATCT                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD166013             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAAATTACTCAGTACGACCAAACGACGTCAACGTGATCTTCGTCATCGAGATATTTTTGAGAAAGTGATGCCGGAAGTTAAGAAAAATCGCGAAGACAGGGAAATGGGAAACACTGAATACGCCAAACCAGGGGTCGATGATGATTCTGGCGGGGTTTCTAACCTAAATGATGGTTCTCAGACTACTCCCTACGATGCTATAGAAGAGATGAATAAATTAAAGGAATATGCAATTGATCCTCCAGTTATGCTTGCACCTTGGCAGCGTCGATATCAATTCATATGTGAATCAGGTTTAATCACAGACTGTCGTGCTCAGCTTCAAGAAAATCAAGATCT                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD180716             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATGATTCTGGCGGGGTTTCTAACCTAAATGATGGTTCTCAGACTACTCCCTACGATGCTATAGAAGAGATGAATAAATTAAAGGAATATGCAATTGATCCTCCAGTTATGCTTGCACCTTGGCAGCGTCGATATCAATTCATATGTGAATCAGGTTTAATCACAGACTGTCGTGCTCAGCTTCAAGAAAATCAAGATCTGTCTAAGTGGTCGGAAGAGGAAAAGCAAATATTTAAGGAGCGCTATTTAGCCACTCCTAAGAATTTTACTTCGATAGCTTCATACTTAGAGCGTAAATCTGTTGCAGACTGTATCCACTATTACTATTTATCCAAAAAGAAAGAAGGTTATAAACAGCTGTTGAAGAAGCATAACGCTCGTCGACGCCGAGCAGCTCAGACAGAACGTGCAGGAGGGGGTGGTGGTACTGGAGGAGCTTCTAGC                                                                                ]
[+] EMBL CD113079             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCAATTCATATGTGAATCAGGTTTAATCACAGACTGTCGTGCTCAGCTTCAAGAAAATCAAGATCTGTCTAAGTGGTCGGAAGAAGAAAAGCAGATATTTAAGGAGCGCTATTTAGCCACTCCTAAAAATTTTACTTCGATAGCTTCATACTTAGAGCGTAAATCTGTTGCAGACTGTATCCACTATTACTATTTATCCAAAAAGAAAGAAGGTTATAAACAGCTGTTGAAGAAGCATAACGCTCGTCGACGCCGAGCAGCTCAGACAGAACGTGGAGGAGGGGGTGGTGGTACAGGTGGAGTTTCTAGCAATTCAAATGCTGGCGGGAGTAGCGGTAGTCATGGTAGTAGTAGTAGTAACAACTCAAATATGAACACTATCCCTCCATC]




>consensus_10374#0
AATTCCATTGATCATCGAAGATGGAAGGGTACAATAACAGACCATTTCCTCATGCAACTG
CGCCTACCCAGGCGATAACTTCCGGACAAACCCTAGTTAGCGCACCTGTCTTGGGATCAC
AAACTGTAACTAGTCAGCCTCCATTGTCACATATGCCAGCGAAAGCATCGCATCCAACAT
CAGTCTCCCAAATCCCTTCTCGCCTGATTTCTGGCCATCTTCATCATCCACATGCTCCTA
CACATCCTAGTCAAAGCAGTTTCCACCAGTCAAATCATCCTTTACCACAGCCAGGTTCTC
AACATCATGTGATGGGCCATTCTAATCTCCCTCAAGGAAGTGGCGTACTTCGACAGCAGA
CTAAAGAACCGGCTTATCACCCACAGGTTGAAGCCATATCCCCTGCTCCTGATGAATCTC
GTCTAGTGGATGCCCAGGATGCAAAGCTTCATCGTGAAAGGGAAGAAATTAACCGTCAGC
TGACAGTATTAGATGCTGATATTAATAAACAAGAATCCCATCTCAGAAATCTGTGTGAGC
GAGAGGCTCGTTTAATAGCTCGACTTGCGGTAGCACCTACACGCGATACATCGAACAATA
ATTTGAAACAGTACGATCATGAAAGTAAATCAAATAAAGGGGATCTTGCTGTTCCGGAAG
TATCTTTCACTTGTAAAACCGGTTTTGAACGAAATTACGAAAACCCAATACAGGCAATTA
TTTCTGACAACCGTCAACGTACTCGTCAGCGTCATCTCATTTTCACAAGACTTTGTGGTC
CCAAAGTTAGACCTGGACCACATGCCCTGCCATTTTATCGCCAACCATCCGACTTGTCAA
GTGTAAGGGCTATACAATCCAACTTTCGCAACCATTTCCGTCCAAAACTTGTTGTTTATC
TTCGAAGACGTCTCCGTGCCGAACAAAGTCGTATCAATTTTTTGGCTCAACAATACGGAC
GAAATTCTAGAGTATTTACCAAAAAGATGGACAAATTACTCAGTACGACCAAACGACGTC
AACGTGATCTTCGTCATCGAGATATTTTTGAGAAAGTGATGCCGGAAGTTAAGAAAAATC
GCGAAGACAGGGAAATGGGAAACACTGAATACGCCAAACCAGGGGTCGATGATGATTCTG
GCGGGGTTTCTAACCTAAATGATGGTTCTCAGACTACTCCCTACGATGCTATAGAAGAGA
TGAATAAATTAAAGGAATATGCAATTGATCCTCCAGTTATGCTTGCACCTTGGCAGCGTC
GATATCAATTCATATGTGAATCAGGTTTAATCACAGACTGTCGTGCTCAGCTTCAAGAAA
ATCAAGATCTGTCTAAGTGGTCGGAAGAGGAAAAGCAAATATTTAAGGAGCGCTATTTAG
CCACTCCTAAGAATTTTACTTCGATAGCTTCATACTTAGAGCGTAAATCTGTTGCAGACT
GTATCCACTATTACTATTTATCCAAAAAGAAAGAAGGTTATAAACAGCTGTTGAAGAAGC
ATAACGCTCGTCGACGCCGAGCAGCTCAGACAGAACGTGCAGGAGGGGGTGGTGGTACTG
GAGGAGCTTCTAGCAATTCAAATGCTGGCGGGAGTAGCGGTAGTCATGGTAGTAGTAGTA
GTAACAACTCAAATATGAACACTATCCCTCCATC

consensusID : consensus_10374#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 440
fasta sequence

                              [ACTGTAACTAGTCAGCCTCCATTGTCACATATGCCAGCGAAAGCATCGCATCCAACATCAGTCTCCCAAATCCCTTCTCGCCTGATTTCTGGCCATCTTCATCATCCACATGCTCCTACACATCCTAGTCAAAGCAGTTTCCACCAGTCAAATCATCCTTTACCACAGCCAGGTTCTCAACATCATGTGATGGGCCATTCTAATCTCCCTCAAGGAAGTGGCGTACTTCGACAGCAGACTAAAGAACCGGCTTATCACCCACAGGTGGGTGTTTGTATCTTGATATTTTAAACTTAGATCTCGCCAGTTGTTTTTACGTCTGTTACCTCAGTGAATTTCCATTTCACCCAAATTAGTAATAATGTTTCAAAGCTTTTTATGTTGAGAATATTGACGTTTCTTAGGTTCATGTGACAATTTTTTATTCCCATGTACTTGAG]

[+] EMBL CD198656             [ACTGTAACTAGTCAGCCTCCATTGTCACATATGCCAGCGAAAGCATCGCATCCAACATCAGTCTCCCAAATCCCTTCTCGCCTGATTTCTGGCCATCTTCATCATCCACATGCTCCTACACATCCTAGTCAAAGCAGTTTCCACCAGTCAAATCATCCTTTACCACAGCCAGGTTCTCAACATCATGTGATGGGCCATTCTAATCTCCCTCAAGGAAGTGGCGTACTTCGACAGCAGACTAAAGAACCGGCTTATCACCCACAGGTGGGTGTTTGTATCTTGATATTTTAAACTTAGATCTCGCCAGTTGTTTTTACGTCTGTTACCTCAGTGAATTTCCATTTCACCCAAATTAGTAATAATGTTTCAAAGCTTTTTATGTTGAGAATATTGACGTTTCTTAGGTTCATGTGACAATTTTTTATTCCCATGTACTTGAG]
[+] EMBL CD202806             [                            ATATGCCAGCGAAAGCATCGCATCCAACATCAGTCTCCCAAATCCCTTCTCGCCTGATTTCTGGCCATCTTCATCATCCACATGCTCCTACACATCCTAGTCAAAGCAGTTTCCACCAGTCAAATCATCCTTTACCACAGCCAGGCTCTCAACATCATGTGATGGGCCATTCTAATCTCCCTCA                                                                                                                                                                                                                                    ]
[-] EMBL CD154843             [                                                          CAGTCTCCCAAATCCCTTCTCGCCTGATTTCTGGCCATCTTCATCATCCACATGCTCCTACACATCCTAGTCAAAGCAGTTTCCACCAGTCAAATCATCCTTTACCACAGCCAGGTTCTCAACATCATGTGATGGGCCATTCTAATCTCCCTCAA                                                                                                                                                                                                                                   ]




>consensus_10374#1
ACTGTAACTAGTCAGCCTCCATTGTCACATATGCCAGCGAAAGCATCGCATCCAACATCA
GTCTCCCAAATCCCTTCTCGCCTGATTTCTGGCCATCTTCATCATCCACATGCTCCTACA
CATCCTAGTCAAAGCAGTTTCCACCAGTCAAATCATCCTTTACCACAGCCAGGTTCTCAA
CATCATGTGATGGGCCATTCTAATCTCCCTCAAGGAAGTGGCGTACTTCGACAGCAGACT
AAAGAACCGGCTTATCACCCACAGGTGGGTGTTTGTATCTTGATATTTTAAACTTAGATC
TCGCCAGTTGTTTTTACGTCTGTTACCTCAGTGAATTTCCATTTCACCCAAATTAGTAAT
AATGTTTCAAAGCTTTTTATGTTGAGAATATTGACGTTTCTTAGGTTCATGTGACAATTT
TTTATTCCCATGTACTTGAG

consensusID : consensus_10374#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 407
fasta sequence

                              [TTCCCGCCATGCAACTGCGCCTACCCAGGCGATAACTTCCGGACAAACCCTAGTTAGCGCACCTGTCTTGGGATCACAAACTGTAACTAGTCAGCCTCCATTGTCACATATGCCAGCGAAAGCATCGCATCCAACATCAGTCTCCCAAATCCCTTCTCGCCTGATTTCTGGCCATCTTCATCATCCACATGCTCCTACACATCCTAGTCAAAGCAGTTTCCACCAGTCAAATCATCCTTTACCACAGCCAGGTTCTCAACATCATGTGATGGGCCATTCTAATCTCCCTCAAGGAAGTGGCGTACTTCGACAGCAGACTAAAGAACCGGCTTATCACCCACAGGTGGTACTGGTGGAGTTTCTAGCAATTCAAATGCTGGCGGGAAGACTGCAGGCAGCGGGAAGAC]

[+] EMBL CD180464             [TTCCCGCCATGCAACTGCGCCTACCCAGGCGATAACTTCCGGACAAACCCTAGTTAGCGCACCTGTCTTGGGATCACAAACTGTAACTAGTCAGCCTCCATTGTCACATATGCCAGCGAAAGCATCGCATCCAACATCAGTCTCCCAAATCCCTTCTCGCCTGATTTCTGGCCATCTTCATCATCCACATGCTCCTACACATCCTAGTCAAAGCAGTTTCCACCAGTCAAATCATCCTTTACCACAGCCAGGTTCTCAACATCATGTGATGGGCCATTCTAATCTCCCTCAAGGAAGTGGCGTACTTCGACAGCAGACTAAAGAACCGGCTTATCACCCACAGGTGGTACTGGTGGAGTTTCTAGCAATTCAAATGCTGGCGGGAAGACTGCAGGCAGCGGGAAGAC]
[+] EMBL CD163664             [                GCGCCTACCCAGGCGATAACTTCCGGACAAACCCTAGTTAGCGCACCTGTCTTGGGATCACAAACTGTAACTAGTCAGCCTCCATTGTCACATATGCCAGCGAAAGCATCGCATCCAACATCAGTCTCCCAAATCCCTTCTCGCCTGATTTCTGGCCATCTTCATCATCCACATGCTCCTACACATCCTAGTCAAAGCAGTTTCCACCAGTCAAATCATCCTTTACCACAGCCAGGTTCTCAACATCATGTGATGGGCCATTCTAATCTCCCTCAAGGAAGTGGCGTACTTCGACAGCAGACTAAAGAACCGGCTTATCACCCACAGGTGGTACTGGTGGAGTTTCTAGCAAT                                      ]




>consensus_10374#2
TTCCCGCCATGCAACTGCGCCTACCCAGGCGATAACTTCCGGACAAACCCTAGTTAGCGC
ACCTGTCTTGGGATCACAAACTGTAACTAGTCAGCCTCCATTGTCACATATGCCAGCGAA
AGCATCGCATCCAACATCAGTCTCCCAAATCCCTTCTCGCCTGATTTCTGGCCATCTTCA
TCATCCACATGCTCCTACACATCCTAGTCAAAGCAGTTTCCACCAGTCAAATCATCCTTT
ACCACAGCCAGGTTCTCAACATCATGTGATGGGCCATTCTAATCTCCCTCAAGGAAGTGG
CGTACTTCGACAGCAGACTAAAGAACCGGCTTATCACCCACAGGTGGTACTGGTGGAGTT
TCTAGCAATTCAAATGCTGGCGGGAAGACTGCAGGCAGCGGGAAGAC

consensusID : consensus_10374#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 335
fasta sequence

                              [GCTCTTTATTAAGTCTCCTATAGTGCTAATCAGTAAAAAATTGGTTGTTTATTTCACTTTTCTGTAGAAATTGCAAATCTGTTTATGAATATTTTTCTAGGTTGAAGCCATATCCCCTGCTCCTGATGAATCTCGTCTAGTGGATGCCCAGGATGCAAAGCTTCATCGTGAAAGGGAAGAAATTAACCGTCAGCTGACAGTATTAGATGCTGATATTAATAAACAAGAATCCCATCTCAGAAATCTGTGTGAGCGAGAGGCTCGTTTAATAGCTCGACTTGCGGTAGCACCTACACGCGATACATCGAACAATAATTTGAACAGTAACGATCATG]

[+] EMBL CD131602             [GCTCTTTATTAAGTCTCCTATAGTGCTAATCAGTAAAAAATTGGTTGTTTATTTCACTTTTCTGTAGAAATTGCAAATCTGTTTATGAATATTTTTCTAGGTTGAAGCCATATCCCCTGCTCCTGATGAATCTCGTCTAGTGGATGCCCAGGATGCAAAGCTTCATCGTGAAAGGGAAGAAATTAACCGTCAGCTGACAGTATTAGATGCTGATATTAATAAACAAGAATCCCATCTCAGAAATCTGTGTGAGCGAGAGGCTCGTTTAATAGCTCGACTTGCGGTAGCACCTACACGCGATACATCGAACAATAATTTGAACAGTAACGATCATG]




>consensus_10374#3
GCTCTTTATTAAGTCTCCTATAGTGCTAATCAGTAAAAAATTGGTTGTTTATTTCACTTT
TCTGTAGAAATTGCAAATCTGTTTATGAATATTTTTCTAGGTTGAAGCCATATCCCCTGC
TCCTGATGAATCTCGTCTAGTGGATGCCCAGGATGCAAAGCTTCATCGTGAAAGGGAAGA
AATTAACCGTCAGCTGACAGTATTAGATGCTGATATTAATAAACAAGAATCCCATCTCAG
AAATCTGTGTGAGCGAGAGGCTCGTTTAATAGCTCGACTTGCGGTAGCACCTACACGCGA
TACATCGAACAATAATTTGAACAGTAACGATCATG

consensusID : consensus_10374#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 260
fasta sequence

                              [CTCTATTTCTTGAACCAGTACTCCCACTGCTACCACCATGTGTCTCTTTTTTCATATTTTTGTATCCATCAACATCCTTATGCTCAGCTGTTTCATTAGATTCAGGAAACCTAGAAGAATCAGTTTGTGAATTTTTTAATCCTCTTGGATCTTTTTCATCCGTTTCATTACGTTCTCCACGAGGAGAATTTATATTCGTGTGCCCATTTTGACAACTACCAGAAGATGGAGGGATAGTGTTCATATTTGAGTTGTTGCTA]

[+] EMBL CD193584             [CTCTATTTCTTGAACCAGTACTCCCACTGCTACCACCATGTGTCTCTTTTTTCATATTTTTGTATCCATCAACATCCTTATGCTCAGCTGTTTCATTAGATTCAGGAAACCTAGAAGAATCAGTTTGTGAATTTTTTAATCCTCTTGGATCTTTTTCATCCGTTTCATTACGTTCTCCACGAGGAGAATTTATATTCGTGTGCCCATTTTGACAACTACCAGAAGATGGAGGGATAGTGTTCATATTTGAGTTGTTGCTA]




>consensus_10374#4
CTCTATTTCTTGAACCAGTACTCCCACTGCTACCACCATGTGTCTCTTTTTTCATATTTT
TGTATCCATCAACATCCTTATGCTCAGCTGTTTCATTAGATTCAGGAAACCTAGAAGAAT
CAGTTTGTGAATTTTTTAATCCTCTTGGATCTTTTTCATCCGTTTCATTACGTTCTCCAC
GAGGAGAATTTATATTCGTGTGCCCATTTTGACAACTACCAGAAGATGGAGGGATAGTGT
TCATATTTGAGTTGTTGCTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10374#1      ------------------------------------------------------------
consensus_10374#2      -------------------------------------------TTCCCGCCATGCAACTG 17
consensus_10374#0      AATTCCATTGATCATCGAAGATGGAAGGGTACAATAACAGACCATTTCCTCATGCAACTG 60
consensus_10374#3      ------------------------------------------------------------
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      ------------------------------------------------------------
consensus_10374#2      CGCCTACCCAGGCGATAACTTCCGGACAAACCCTAGTTAGCGCACCTGTCTTGGGATCAC 77
consensus_10374#0      CGCCTACCCAGGCGATAACTTCCGGACAAACCCTAGTTAGCGCACCTGTCTTGGGATCAC 120
consensus_10374#3      ------------------------------------------------------------
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      --ACTGTAACTAGTCAGCCTCCATTGTCACATATGCCAGCGAAAGCATCGCATCCAACAT 58
consensus_10374#2      AAACTGTAACTAGTCAGCCTCCATTGTCACATATGCCAGCGAAAGCATCGCATCCAACAT 137
consensus_10374#0      AAACTGTAACTAGTCAGCCTCCATTGTCACATATGCCAGCGAAAGCATCGCATCCAACAT 180
consensus_10374#3      ------------------GCTCTTTATTAAGTCTCCTATAGTGCTAATCA-GTAAAAAAT 41
consensus_10374#4      ---------------------CTCTATTTCTTGAACCAGTACTCCCACTGCTACCACCAT 39
                                            *  * *    *   * *        *        *  **

consensus_10374#1      CAGTCTCCCAAATCCCTTCTCGCCTGATTTCTGGCCATCTTCATCATCCACATGCTCCTA 118
consensus_10374#2      CAGTCTCCCAAATCCCTTCTCGCCTGATTTCTGGCCATCTTCATCATCCACATGCTCCTA 197
consensus_10374#0      CAGTCTCCCAAATCCCTTCTCGCCTGATTTCTGGCCATCTTCATCATCCACATGCTCCTA 240
consensus_10374#3      TGGTTGTTTATTTCACTTTTCTGTAGAAATT--GCAAATCTGTTTATGAATATTTTTCTA 99
consensus_10374#4      GTGTCTCTTTTTTCATATTTTTGTATCCATC-AACATCCTTATGCTCAGCTGTTTCATTA 98
                         **        **   * *         *    *     *           *     **

consensus_10374#1      CACATCCTAGTCAAAGCAGTTTCCACCAGTCAAATC----ATCCTTTACCACAGCCAGGT 174
consensus_10374#2      CACATCCTAGTCAAAGCAGTTTCCACCAGTCAAATC----ATCCTTTACCACAGCCAGGT 253
consensus_10374#0      CACATCCTAGTCAAAGCAGTTTCCACCAGTCAAATC----ATCCTTTACCACAGCCAGGT 296
consensus_10374#3      GG--TTGAAGCCATATCCCCTGCTCCTGATGAATCT----CGTCTAGTGGATGCCCAGGA 153
consensus_10374#4      GATTCAGGAAACCTAGAAGAATCAGTTTGTGAATTTTTTAATCCTCTTGGATCTTTTTCA 158
                               *  *  *       *      * **          **     *         

consensus_10374#1      TCTCAA----CATCATGTGATGGGCCATTCTAATCTCCCTCAAGGAAGTGGCGTACTTCG 230
consensus_10374#2      TCTCAA----CATCATGTGATGGGCCATTCTAATCTCCCTCAAGGAAGTGGCGTACTTCG 309
consensus_10374#0      TCTCAA----CATCATGTGATGGGCCATTCTAATCTCCCTCAAGGAAGTGGCGTACTTCG 352
consensus_10374#3      TGCAAAGCTTCATCGTGAAAGGGAAGAAATTAACCGTCAGCT-GACAGTATTAGATGCTG 212
consensus_10374#4      TCCGTT---TCATTACGTTCTCCACGAGGAGAATTTATATTC---GTGTGCC-CATTTTG 211
                       *         ***   *         *    **              **     *    *

consensus_10374#1      ACAGCAGACTAAAGAACCGGCTTATCACCCACAGGTGGGTGTTTGTATCTTGATATTTTA 290
consensus_10374#2      ACAGCAGACTAAAGAACCGGCTTATCACCCACAGGTGG-TACTGGTG----GAGTTTCTA 364
consensus_10374#0      ACAGCAGACTAAAGAACCGGCTTATCACCCACAGGTTGAAGCC-ATATCCCCTGCTCCTG 411
consensus_10374#3      ATATTAA--TAAACAAGAATCCCATC--TCAGAAATCTGTGTGAGCGAGAGGCTCGTTTA 268
consensus_10374#4      ACAACTA-CCAGAAGATGGAGGGATAGTGTTCATATTTGAGTTGTTGCTA---------- 260
                       * *       * *  *       **       *  *                        

consensus_10374#1      --AACTTAGATCTCGCCAGTTGTTTTTACGTCTGTTACCTCAGTGAATTTCCATTTCACC 348
consensus_10374#2      GCAATTCAAATGCTGGCGGG-------AAGACTGCAGGCAGCGGGAAGAC---------- 407
consensus_10374#0      ATGAATCTCGTCTAGTGGATGCCCAGGATGCAAAGCTTCATCGTGAAAGGGAAGAAATTA 471
consensus_10374#3      ATAGCTCGACTTGCGGTAGCACCTACACGCGATACATCGAACAATAATTTGAACAGTAAC 328
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      CAAATTAG-TAATAATGTTTCAAAGCTTTTTATGTTGAGAATATTGACGTTTCTTAGGTT 407
consensus_10374#2      ------------------------------------------------------------
consensus_10374#0      ACCGTCAGCTGACAGTATTAGATGCTGATATTAATAAACAAGAATCCCATCTCAGAAATC 531
consensus_10374#3      GATCATG----------------------------------------------------- 335
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      CATGTGACAATTTTTTATTCCCATGTACTTGAG--------------------------- 440
consensus_10374#2      ------------------------------------------------------------
consensus_10374#0      TGTGTGAGCGAGAGGCTCGTTTAATAGCTCGACTTGCGGTAGCACCTACACGCGATACAT 591
consensus_10374#3      ------------------------------------------------------------
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      ------------------------------------------------------------
consensus_10374#2      ------------------------------------------------------------
consensus_10374#0      CGAACAATAATTTGAAACAGTACGATCATGAAAGTAAATCAAATAAAGGGGATCTTGCTG 651
consensus_10374#3      ------------------------------------------------------------
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      ------------------------------------------------------------
consensus_10374#2      ------------------------------------------------------------
consensus_10374#0      TTCCGGAAGTATCTTTCACTTGTAAAACCGGTTTTGAACGAAATTACGAAAACCCAATAC 711
consensus_10374#3      ------------------------------------------------------------
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      ------------------------------------------------------------
consensus_10374#2      ------------------------------------------------------------
consensus_10374#0      AGGCAATTATTTCTGACAACCGTCAACGTACTCGTCAGCGTCATCTCATTTTCACAAGAC 771
consensus_10374#3      ------------------------------------------------------------
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      ------------------------------------------------------------
consensus_10374#2      ------------------------------------------------------------
consensus_10374#0      TTTGTGGTCCCAAAGTTAGACCTGGACCACATGCCCTGCCATTTTATCGCCAACCATCCG 831
consensus_10374#3      ------------------------------------------------------------
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      ------------------------------------------------------------
consensus_10374#2      ------------------------------------------------------------
consensus_10374#0      ACTTGTCAAGTGTAAGGGCTATACAATCCAACTTTCGCAACCATTTCCGTCCAAAACTTG 891
consensus_10374#3      ------------------------------------------------------------
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      ------------------------------------------------------------
consensus_10374#2      ------------------------------------------------------------
consensus_10374#0      TTGTTTATCTTCGAAGACGTCTCCGTGCCGAACAAAGTCGTATCAATTTTTTGGCTCAAC 951
consensus_10374#3      ------------------------------------------------------------
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      ------------------------------------------------------------
consensus_10374#2      ------------------------------------------------------------
consensus_10374#0      AATACGGACGAAATTCTAGAGTATTTACCAAAAAGATGGACAAATTACTCAGTACGACCA 1011
consensus_10374#3      ------------------------------------------------------------
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      ------------------------------------------------------------
consensus_10374#2      ------------------------------------------------------------
consensus_10374#0      AACGACGTCAACGTGATCTTCGTCATCGAGATATTTTTGAGAAAGTGATGCCGGAAGTTA 1071
consensus_10374#3      ------------------------------------------------------------
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      ------------------------------------------------------------
consensus_10374#2      ------------------------------------------------------------
consensus_10374#0      AGAAAAATCGCGAAGACAGGGAAATGGGAAACACTGAATACGCCAAACCAGGGGTCGATG 1131
consensus_10374#3      ------------------------------------------------------------
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      ------------------------------------------------------------
consensus_10374#2      ------------------------------------------------------------
consensus_10374#0      ATGATTCTGGCGGGGTTTCTAACCTAAATGATGGTTCTCAGACTACTCCCTACGATGCTA 1191
consensus_10374#3      ------------------------------------------------------------
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      ------------------------------------------------------------
consensus_10374#2      ------------------------------------------------------------
consensus_10374#0      TAGAAGAGATGAATAAATTAAAGGAATATGCAATTGATCCTCCAGTTATGCTTGCACCTT 1251
consensus_10374#3      ------------------------------------------------------------
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      ------------------------------------------------------------
consensus_10374#2      ------------------------------------------------------------
consensus_10374#0      GGCAGCGTCGATATCAATTCATATGTGAATCAGGTTTAATCACAGACTGTCGTGCTCAGC 1311
consensus_10374#3      ------------------------------------------------------------
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      ------------------------------------------------------------
consensus_10374#2      ------------------------------------------------------------
consensus_10374#0      TTCAAGAAAATCAAGATCTGTCTAAGTGGTCGGAAGAGGAAAAGCAAATATTTAAGGAGC 1371
consensus_10374#3      ------------------------------------------------------------
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      ------------------------------------------------------------
consensus_10374#2      ------------------------------------------------------------
consensus_10374#0      GCTATTTAGCCACTCCTAAGAATTTTACTTCGATAGCTTCATACTTAGAGCGTAAATCTG 1431
consensus_10374#3      ------------------------------------------------------------
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      ------------------------------------------------------------
consensus_10374#2      ------------------------------------------------------------
consensus_10374#0      TTGCAGACTGTATCCACTATTACTATTTATCCAAAAAGAAAGAAGGTTATAAACAGCTGT 1491
consensus_10374#3      ------------------------------------------------------------
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      ------------------------------------------------------------
consensus_10374#2      ------------------------------------------------------------
consensus_10374#0      TGAAGAAGCATAACGCTCGTCGACGCCGAGCAGCTCAGACAGAACGTGCAGGAGGGGGTG 1551
consensus_10374#3      ------------------------------------------------------------
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      ------------------------------------------------------------
consensus_10374#2      ------------------------------------------------------------
consensus_10374#0      GTGGTACTGGAGGAGCTTCTAGCAATTCAAATGCTGGCGGGAGTAGCGGTAGTCATGGTA 1611
consensus_10374#3      ------------------------------------------------------------
consensus_10374#4      ------------------------------------------------------------
                                                                                   

consensus_10374#1      -------------------------------------------
consensus_10374#2      -------------------------------------------
consensus_10374#0      GTAGTAGTAGTAACAACTCAAATATGAACACTATCCCTCCATC 1654
consensus_10374#3      -------------------------------------------
consensus_10374#4      -------------------------------------------