cluster # 10388

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Schistosoma mansoni
cluster # 10388 cluster # 10388 Sequences # 16 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10388#0 length = 2883 sequences # 15

consensus_10388#1 length = 198 sequences # 1

consensusID : consensus_10388#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 2883
fasta sequence

                              [CAGCCAANAATTTGGCACGAGGTCCTCATCGGCTACCATGGTCAATGGTACTGAATTAACTGATAGTAATTGTAAAAGAGCTGACACTGGTACATACGTTGATCCCAGTCATTCAACGAACCAGCTTAATGTGAACCAGGAATTAGCTGTTCCAGAATCTATTCAAGATATACATTTAGTGAAAGTGAAGAAGAGAAACGAAAACTTTCTTAATAGTGGATGTGTAGGCGACACCGATCAAAGTATTTACTTATCTTCTTTAGTAAATAAATATTTGGGTAACAAAGCTGTTGATAGCGGAACAGTGGATACAGATAGTTCTACAGTAGTCGACTACAGCTTAGCGACACTGGATTATATGAAGCGACATGGTATAATTGAATGTTGTGGAGATAATAAATGTAAACAAAGTACTGCGCCAGTAGCAAGTAGTACTCCGACCGCTAACCACGAAAAAGCATTACATAACTATACTTGTTTTAACGACCCAAGGGATGATTCTGTGTGTACTCCATCGAGTGACCCGTCATCTTTCACTCCGTTTGTGTCTAAAGATCCAAAATCACCTGACCTTACAACTGGAGAGTCGCTCCCAAATATAATGAACGAGTTGGGTCTAGATAAATTACAAATGACACAACATGCTGAAATATGCAACCGTGACACTAAGTATCTGTCTACCTTGTCTGGTTGTTCATCAGAAAAAGATACTTCAATACAACCAACTNTAACAGTATCTGAATACTCACACATTTTTGATTATGAGCCCAACGTTATAAACAGTCCAATTCTCGACTTGGAACGATTACGATCGCTTCCCAAACTCCTGTGACTCTCGTTGTGTATGAAGTGTACTTTGAAATAAATTTAAAACTTAAGATGCTTGTGATGGGTGTTACAAAATGATGTATTTTGTATTTTAATTTATCATTTTTATAAATAATATTTTACAAATAATATCTTAGAAGGTGGTGCGTGTTTCCATAAAAATGATTATGAATTCAATACATATCTTCATCATCATTGTTTCCTGTTTGTTTATTGCCATGCTGATTCTTTATCTGCTCTTGATTTTGATAAAGTTCATAAACTTGTTGGGCTGTTGTTGCGTCTTCGGGCTTTTTGTCATCTCGAATCCGAACGAATCTCGGAAATCTCAGTGAAATGCCTTTTTGTGGATCCGCTAAACCAGCAGCGGCTTTGTGTCCAGGTGATATACTCAAATCGGCTGCCTTCACTTCCCAAACTTGAACAGG-CTCAAACCATTGATCTGGAATTAAACTTATTGTGTATTGATAATAAGGTTTTGCTTTGTCAGTTGCATGGTTTTTGAAAAACTCCGAAAATGAAGCCAATTCATCATCCTTCATTCCTGTACCAATTTTGCATATTGTCTGGTATTCTTCTGTATCTGGATCATAGCATGCCAGTAAGTAACCACCGTAACGACCAGCACGTTTACCAGTTCCATAAAATCCACCTATTACCACCAAATCCAATGTNATCACCAACACCTTCTAAATAGTCTTTTTTCAATTATAACCAGCTATGGGATCGTTCTGCGATTTCGTATGTAGAATTACGATCTAGTGTTTTTATCATTAAACCTTCACAGTTACCTTTGATTGCTTCGTCAAGAAAAGTCGCGATCTCATCTGTATCAGATGAATCAAGAGAGGTGGCCATCATGAACTCTCCAGAAATGCGCGGAAATACTTCTCTAAGTATCTCTCGACGTATGCGTAACGGTTGTTCAATTAAAGATATACCATTTATAAACAGTATATCAAATACATAAATGCATATTTGTACTTTCAGTGTAGATTCATCGACATCTTTACGCTTTCGCGTTGATAGGACTTGGAATGGTAAAATATGTCCAGCTAAACGATCCCAAGCTACAACTTCCGAGTCAATGATACAACTCTCCAG-TTGTTTCCAACTATACCATTTGATTGAACTTGTATTTTATTATCTTTAACAATTTCACTGAGTAGCTCAATTGCATGAGGCGTTAGTTTAGACTCTGGCAGAACCCTAGACATCAGATTATTTACGATATCAGGATATTTTGTGGTATTATCTTCTTGATTACGTGAATACACGTGACTTGCACCTGAAGGGAGAATATGAATTTGAGCCCTTTCACCATCATATTTATATTCACAAGTGAAATCACATTCTTCAAACCTCTTTAAAATTTCATATATTCCATGTGTAGGAGAAGC-TAA-CATTGGTTTTAGAGGAATACCTGGAGTGATTGTGCAAATTTGATCCAGGGACTCATGACTTTTTGTTAAAAGAGCTTTTATAAGACGGCTGTAGTCTGGACAAACGCAATACGCCCTTTTAACATTCGCAACCGCAATATCCATTGTAACTTTCCACTGCTCACTAGACATACCATTAGAAGCATTAATTATTCGCGTGCTTTTATCACTAACTTTAAAATGGAATGGCGTCATAGCTACAGCCTGACCAAGAGCTGTAAGCACAGTTTGTTCAGCTAAGCCAATACGCAATTTTCCTGATAAACTGCGTATAATATATTTCGTTTCAGGTTCTCGACAAGCCACTAGAAGCGAGCGAATGATTCCCATTTTTTTGTTTTGAGCTGAATTTCCAGACATTGAAGCAATATCTTTCAATTTAGAAAATACTGATGAAATGGTCAATGGTTTTGGAGCTGACAGGATTTTCTGACGTGATCTGATAGTTTCGGCGACAGCACCGAGATCACCATGTTGTTTTAAACTCGAACGCATATGTTCAATCCCAACACCTGTAGTTGCAGCCAAAGCCTTTAGTAGGATTGTTTCCCCCACGCCTAGTTCCATCCCTTCATATGCGGGCCCCAGTCGGTTGAGGCAAAGGTAAACGCAA]

[+] EMBL CD079618             [CAGCCAANAATTTGGCACGAGGTCCTCATCGGCTACCATGGTCAATGGTACTGAATTAACTGATAGTAATTGTAAAAGAGCTGACACTGGTACATACGTTGATCCCAGTCATTCAACGAACCAGCTTAATGTGAACCAGGAATTAGCTGTTCCAGAATCTATTCAAGATATACATTTAGTGAAAGTGAAGAAGAGAAACGAAAACTTTCTTAATAGTGGATGTGTAGGCGACACCGATCAAAGTATTTACTTATCTTCTTTAGTAAATAAATATTTGGGTAACAAAGCTGTTGATAGCGGAACAGTGGATACAGATAGTTCTACAGTAGTCGACTACAGCTTAGCGACACTGGATTATATGAAGCGACATGGTATAATTGAATGTTGTGGAGATAATAAATGTAAACAAAGTACTGCGCCAGTAGCAAGTAGTACTCCGACCGCTAACCACGAAAAAGCATTACATAACTATACTTGTTTTAACGACCCAAGGGATGATTCTGTGTGTACTCCATCGAGTGACCCGTCATCTTTCACTCCGTTTGTGTCTAAAGATCCAAAATCACCTGACCTTACAACTGGAGAGTCGCTCCCAAATATAATGAACGAGTTGGGTCTAGATAAATTACAAATGACACAACATGCTGAAATATGCAACCGTGACACTAAGTATCTGTCTACCTTGTCTGGTTGTTCATCAGAAAAAGATACTTCAATACAACCAACTNTAACAGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD171005             [                                                     AATTAACTGATAGTAATTGTAAAAGAGCTGACACTGGTACATACGTTGATCCCAGTCATTCAACGAACCAGCTTAATGTGAACCAGGAATTAGCTGTTCCAGAATCTATTCAAGATATACATTTAGTGAAAGTGAAGAAGAGAAACGAAAACTTTCTTAATAGTGGATGTGTAGGCGACACCGATCAAAGTATTTACTTATCTTCTTTAGTAAATAAATATTTGGGTAACAAAGCTGTTGATAGCGGAACAGTGGATACAGATAGTTCTACAGTAGTCGACTACAGCTTAGCGACACTGGATTATATGAGGCGACATGGTATAATTGAATGTTGTGGAGATAATAAATGTAAACAAAGTACTGCACCAGTAGCAAGTAGTACTCCGACCGCTAACCACGAAAAAGCATTACATAACTATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD073882             [                                                                                                                                                                                                                                                                                                                                                                              ACATGGTATAATTGAATGTTGTGGAGATAATAAATGTAAACAAAGTACTGCGCCAGTAGCAAGTAGTACTCCGACCGCTAACCACGAAAAAGCATTACATAACTATACTTGTTTTAACGACCCAAGGGATGATTCTGTGTGTACTCCATCGAGTGACCCGTCATCTTTCACTCCGTTTGTGTCTAAAGATCCAAAATCACCTGACCTTACAACTGGAGAGTCGCTCCCAAATATAATGAACGAGTTGGGTCTAGATAAATTACAAATGACACAACATGCTGAAATATGCAACCGTGACACTAAGTATCTGTCTACCTTGTCTGGTTGTTCATCAGAAAAAGATACTTCAATACAACCAACTTTAACAGTATCTGAATACTCACACATTTTTGATTATGAGCCCAACGTTATAAACAGTCCAATTCTCGACTTGGAACGATTACGATCGCTTCCCAAACTCCTGTGACTCTCGTTGTGTATGAAGTGTACTTTGAAATAAATTTAAAACTTAAGATGCTTGTGATGGGTGTTACAAAATGATGTATTTTGTATTTTAATTTATCATTTTTATAAATAATATTTTACAAATAATATCTTAGAAGGTGGTGCGTGTTTCCATAAAAATGATTATGAATTCAATACATATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD076674             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TACAAAATGATGTATTTTGTATTTTAATTTATCATTTTTATAAATAATATTTTACAAATAATATCTTAGAAGGTGGTGCGTGTTTCCATAAAAATGATTATGAATTCAATACATATCTTCATCATCATTGTTTCCTGTTTGTTTATTGCCATGCTGATTCTTTATCTGCTCTTGATTTTGATAAAGTTCATAAACTTGTTGGGCTGTTGTTGCGTCTTCGGGCTTTTTGTCATCTCGAATCCGAACGAATCTCGGAAATCTCAGTGAAATGCCTTTTTGTGGATCCGCTAAACCAGCAGCGGCTTTGTGTCCAGGTGATATACTCAAATCGGCTGCCTTCACTTCCCAAACTTGAACAGG CTCAAACCATTGATCTGGAATTAAACTTATTGTGTATTGATAATAAGGTTTTGCTTTGTCAGTTGCATGGTTTTTGAAAAACTCCGAAAATGAAGCCAATTCATCATCCTTCATTCCTGTACCAATTTTGCATATTGGCTGGTATTCTTCTGTATCTGGATCATAGCATGCCAGTAAGTAACCACCGTAACGACCAGCACGTTTACCAGTTCCATAAAATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD075975             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TACAAAATGATGTATTTTGTATTTTAATTTATCATTTTTATAAATAATATTTTACAAATAATATCTTAGAAGGTGGTGCGTGTTTCCATAAAAATGATTATGAATTCAATACATATCTTCATCATCATTGTTTCCTGTTTGTTTATTGCCATGCTGATTCTTTATCTGCTCTTGATTTTGATAAAGTTCATAAACTTGTTGGGCTGTTGTTGCGTCTTCGGGCTTTTTGTCATCTCGAATCCGAACGAATCTCGGAAATCTCAGTGAAATGCCTTTTTGTGGATCCGCTAAACCAGCAGCGGCTTTGTGTCCAGGTGATATACTCAAATCGGCTGCCTTCACTTCCCAAACTTGAACAGG CTCAAACCATTGATCTGGAATTAAACTTATTGTGTATTGATAATAAGGTTTTGCTTTGTCAGTTGCATGGTTTTTGAAAAACTCCGAAAATGAAGCCAATTCATCATCCTTCATTCCTGTACCAATTTTGCATATTGNCTGGTATTCTTCTGTATCTGGATCATAGCATGCCAGTAAGTAACCACCGTAACGACCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD076601             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGTATTTTGTATTTTAATTTATCATTTTTATAAATAATATTTTACAAATAATATCTTAAAAGGTGGTGCGTGTTTCCATAAAAATGATTATGAATTCAATACATATCTTCATCATCATTGTTTCCTGTTTGTTTATTGCCATGCTGATTCTTTATCTGCTCTTGATTTTGATAAAGTTCATAAACTTGTTGGGCTGTTGTTGCGTCTTCGGGCTTTTTGTCATCTCGAATCCGAACGAATCTCGGAAATCTCAGTGAAATGCCTTTTTGTGGATCCGCTAAACCAGCAGCGGCTTTGTGTCCAGGTGATATACTCAAATCGGCTGCCTTCACTTCCCAAACTTGAACAGG CTCAAACCATTGATCTGGAATTAAACTTATTGTGTATTGATAATAAGGTTTTGCTTTGTCAGTTGCATGGTTTTTGAAAAACTCCGAAAATGAAGCCAATTCATCATCCTTCATTCCTGTACCAATTTTGCATATTGTCTGGTATTCTTCTGTATCTGGATCATAGCATGCCAGTAAGTAACCACCGTAACGACCAGCACGTTTACCAGTTCCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD130558             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGCTTCTTGTCATCTCGAATCCGAACGAATCTCGGAAATCTCAGTGAAATGCCTTTTTGTGGATCCGCTAAACCAGCAGCGGCTTTGTGTCCAGGTGATATACTCAAATCGGCTGCCTTCACTTCCCAAACTTGAACAGGACTCAAACCATTGATCTGGAATTAAACTTATTGTGTATTGATAATAAGGCTTTGCTTTGACAGTTGCATGGTTTTTGAAAAACTCCGAAAATGAAGCCAATTCATCATCCTTCATTCCTGTACCAATTTTGCATATTGTCTGGAATTCTTCTGTATCTGGATCATAGCATGCCAGTAAGTAACCACCGTATCGACCAGCACGTTTACCAGTTCCATAAAATCCACCTATTACCACCAAATCCAATGTNATCACCAACACCTTCTAAATAGTCTTTTTTCAATTATAACCAGCTATGGGATCGTTCTGCGATTTCGTATGTAGAATTACGATCTAGTGTTTTTATCATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD187718             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATCTCAGTGAAATGCCTTTTTGTGGATCCGCTAAACCAGCAGCGGCTTTGTGTCCAGGTGATATACTCAAATCGGCTGCCTTCACTTCCCAAACTTGAACAGG CTCAAACCATTGATCTGGAATTAAACTTATTGTGTATTGATAATAAGGTTTTGCTTTGTCAGTTGCATGGTTTTTGAAAAACTCCGAAAATGAAGCCAATTCATCATCCTTCATTCCTGTACCAATTTTGCATATTGTCTGGTATTCTTCTGTATCTGGATCATAGCATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD082373             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCTTGNTCAGTTGCATGGTTTTTGAANAACTCCGANAATGAAGCCAATTCATCATCCTTCATTCCTGTACCAATTTTGCATATTGTCTGGTATTCTTCTGTATCTGGATCATAGCATGCCAGTAAGTAACCACCGTAACGACCAGCACGTTTACCAGTTCCATAAAATCCACCTATTACCACCAAATCCAATGT ATCACCAACACCTTCTAAATAGTCTTTTTTCAATTTTAACCAGCTATGGGATCGTTTTGCGATTTCGTAGGTAGAATTACGATCTAGTGTTTTTATCATTAAACCTTCACAGTTACCTTTGATTGCTTCGTCAAGAAAAGTCGCGATCTCATCTGTATCAGATGAATCAAGAGAGGTTGCCATCATGAACTCTCCAGAAATGCGCGGAAATACTTCTCTAAGTATCTCTCGACGTATGCGTAACGGTTGTTCAATTAAAGATATACCATTTATAAACAGTATATCAAATACATAAATGCATATTTGTACTTTCAGTGTAGATTCATCGACATCTTTACGCTTTCGCGTTGATAGGACTTGGAATGGTAAAATATGTCCAGCTGAACGATCCCAAGCTACAACTTCCGAGTCAATGATACAACTCTCCAG TTGTCTCgta                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD083016             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CATCTGTATCAGATGAATCAAGAGAGGTGCCCATCATGAACTCTCCAGAAATGCGCGGAAATACTTCTCTAAGTATCTCTCGACGTATGCGTAACGGTTGTTCAATTAAAGATATACCATTTATAAACAGTATATCAAATACATAAATGCATATTTGTACTTTCAGTGTAGATTCATCGACATCTTTACGCTTTCGCGTTGATAGGACTTGGAATGGTAAAATATGTCCAGCTAAACGATCCCAAGCTACAACTTCCGAGTCAATGATACAACTCTCCAGTTTGTTTCCAACTATACCATTTGATTGAACTTGTATTTTATTATCTTTAACAATTTCACTGAGTAGCTCAATTGCATGAGGCGTTAGTTTAGACTCTGGCAGAACCCTAGACATCAGATTATTTACGATATCAGGATATTTTGTGGTATTATCTTCTTGATTACGTGAATACACGTGACTTGCACCTGAAGGGAGAATATGAATTTGAGCCCTTTCACCATCATATTTATATTCACAAGTGAAATCACATTCTTCAAACCTCTTTAAAATTTCATATATTCCATGTGTAGGAGAAGC TAACCATTGGTTTTAGAGGAATACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD083100             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATGAATCAAGAGAGGTGNCCATCATGAACTCTCCAGAAATGCGCGGAAATACTTCTCTAAGTATCTCTCGACGTATGCGTAACGGTTGTTCAATTAAAGATATACCATTTATAAACAGTATATCAAATACATAAATGCATATTTGTACTTTCAGTGTAGATTCATCGACATCTTTACGCTTTCGCGTTGATAGGACTTGGAATGGTAAAATATGTCCAGCTAAACGATCCCAAGCTACAACTTCCGAGTCAATGATACAACTCTCCAGTTTGTTTCCAACTATACCATTTGATTGAACTTGTATTTTATTATCTTTAACAATTTCACTGAGTAGCTCAATTGCATGAGGCGTTAGTTTAGACTCTGGCAGAACCCTAGACATCAGATTATTTACGATATCAGGATATTTTGTGGTATTATCTTCTTGATTACGTGAATACACGTGACTTGCACCTGAAGGGAGAATATGAATTTGAGCCCTTTCACCATCATATTTATATTCACAAGTGAAATCACATTCTTCAAACCTCTTTAAAATTTCATATATTCCATGTGTAGGAGAAGCNTAA CATTGGTTTTAGAGGAATACCTGGAGTGATTGTGCAAAc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD130700             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATACACGTGACTTGCACCTGAAGGGAGAATATGAATTTGAGCCCTTTCACCATCATATTTATATTCACAAGTGAAATCACATTCTTCAAACCTCTTTAAAATTTCATATATTCCATGTGTAGGAGAAGC TAA CATTGGTTTTAGAGGAATACCTGGAGTGATTGTGCAAATTTGATCCAGGGACTCATGACTTTTTGTTAAAAGAGCTTTTATAAGACGGCTGTAGTCTGGACAAACGCAATACGCCCTTTTAACATTCGCAACCGCAATATCCATTGTAACTTTCCACTGCTCACTAGACATACCATTAGAAGCATTAATTATTCGCGTGCTTTTATCACTAACTTTAAAATGGAATGGCGTCATAGCTACAGCCTGACCAAGAGCTGTAAGCACAGTTTGTTCAGCTAAGCCAATACGCAATTTTCCTGATAAACTGCGTATAATATATT                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD195867             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCTGGAGTGATTGTGCAAATTTGATCCAGGGACTCATGAC TTTTGTTAAAAGAGCTNTTATAAGACGGCTGTAGTCTGGACAAACGCAATACGCCCTTTTAACATTCGCAACCGCAATATCCATTGTAACTTTCCACTGCTCACTAGACATACCATTAGAAGCATTAATTATTCGCGTGCTTTTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD136365             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCTGGACAAACGCAATACGCCCTTTTAACATTCGCAACCGCAATATCCATTGTAACTTTCCACTGCTCACTAGACATACCATTAGAAGCATTAATTATTCGCGTGCTTTTATCACTAACTTTAAAATGGAATGGCGTCATAGCTACAGCCTGACCAAGAGCTGTAAGCACAGTTTGTTCAGCTAAGCCAATACGCAATTTTCCTGATAAACTGCGTATAATATATTTCGTTTCAGG                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD198478             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTACAGCCTGACCAAGAGCTGTAAGCACAGTTTGTTCAGCTAAGCCAATACGCAATTTTCCTGATAAACTGCGTATAATATATTTCGTTTCAGATTCTCGACAAGCCACTAGAAGCGAGCGAATGATTCCCATTTTTTTGTTTTGAGCTGAATTTCCAGACATTGAAGCAATATCTTTCAATTTAGAAAATACTGATGAAATGGTCAATGGTTTTGGAGCTGACAGGATTTTCTGACGTGATCTGATAGTTTCGGCGACAGCACCGAGATCACCATGTTGTTTTAAACTCGAACGCATATGTTCAATCCCAACACCTGTAGTTGCAGCCAAAGCCTTTAGTAGGATTGTTTCCCCCACGCCTAGTTCCATCCCTTCATATGCGGGCCCCAGTCGGTTGAGGCAAAGGTAAACGCAA]




>consensus_10388#0
CAGCCAANAATTTGGCACGAGGTCCTCATCGGCTACCATGGTCAATGGTACTGAATTAAC
TGATAGTAATTGTAAAAGAGCTGACACTGGTACATACGTTGATCCCAGTCATTCAACGAA
CCAGCTTAATGTGAACCAGGAATTAGCTGTTCCAGAATCTATTCAAGATATACATTTAGT
GAAAGTGAAGAAGAGAAACGAAAACTTTCTTAATAGTGGATGTGTAGGCGACACCGATCA
AAGTATTTACTTATCTTCTTTAGTAAATAAATATTTGGGTAACAAAGCTGTTGATAGCGG
AACAGTGGATACAGATAGTTCTACAGTAGTCGACTACAGCTTAGCGACACTGGATTATAT
GAAGCGACATGGTATAATTGAATGTTGTGGAGATAATAAATGTAAACAAAGTACTGCGCC
AGTAGCAAGTAGTACTCCGACCGCTAACCACGAAAAAGCATTACATAACTATACTTGTTT
TAACGACCCAAGGGATGATTCTGTGTGTACTCCATCGAGTGACCCGTCATCTTTCACTCC
GTTTGTGTCTAAAGATCCAAAATCACCTGACCTTACAACTGGAGAGTCGCTCCCAAATAT
AATGAACGAGTTGGGTCTAGATAAATTACAAATGACACAACATGCTGAAATATGCAACCG
TGACACTAAGTATCTGTCTACCTTGTCTGGTTGTTCATCAGAAAAAGATACTTCAATACA
ACCAACTNTAACAGTATCTGAATACTCACACATTTTTGATTATGAGCCCAACGTTATAAA
CAGTCCAATTCTCGACTTGGAACGATTACGATCGCTTCCCAAACTCCTGTGACTCTCGTT
GTGTATGAAGTGTACTTTGAAATAAATTTAAAACTTAAGATGCTTGTGATGGGTGTTACA
AAATGATGTATTTTGTATTTTAATTTATCATTTTTATAAATAATATTTTACAAATAATAT
CTTAGAAGGTGGTGCGTGTTTCCATAAAAATGATTATGAATTCAATACATATCTTCATCA
TCATTGTTTCCTGTTTGTTTATTGCCATGCTGATTCTTTATCTGCTCTTGATTTTGATAA
AGTTCATAAACTTGTTGGGCTGTTGTTGCGTCTTCGGGCTTTTTGTCATCTCGAATCCGA
ACGAATCTCGGAAATCTCAGTGAAATGCCTTTTTGTGGATCCGCTAAACCAGCAGCGGCT
TTGTGTCCAGGTGATATACTCAAATCGGCTGCCTTCACTTCCCAAACTTGAACAGGCTCA
AACCATTGATCTGGAATTAAACTTATTGTGTATTGATAATAAGGTTTTGCTTTGTCAGTT
GCATGGTTTTTGAAAAACTCCGAAAATGAAGCCAATTCATCATCCTTCATTCCTGTACCA
ATTTTGCATATTGTCTGGTATTCTTCTGTATCTGGATCATAGCATGCCAGTAAGTAACCA
CCGTAACGACCAGCACGTTTACCAGTTCCATAAAATCCACCTATTACCACCAAATCCAAT
GTNATCACCAACACCTTCTAAATAGTCTTTTTTCAATTATAACCAGCTATGGGATCGTTC
TGCGATTTCGTATGTAGAATTACGATCTAGTGTTTTTATCATTAAACCTTCACAGTTACC
TTTGATTGCTTCGTCAAGAAAAGTCGCGATCTCATCTGTATCAGATGAATCAAGAGAGGT
GGCCATCATGAACTCTCCAGAAATGCGCGGAAATACTTCTCTAAGTATCTCTCGACGTAT
GCGTAACGGTTGTTCAATTAAAGATATACCATTTATAAACAGTATATCAAATACATAAAT
GCATATTTGTACTTTCAGTGTAGATTCATCGACATCTTTACGCTTTCGCGTTGATAGGAC
TTGGAATGGTAAAATATGTCCAGCTAAACGATCCCAAGCTACAACTTCCGAGTCAATGAT
ACAACTCTCCAGTTGTTTCCAACTATACCATTTGATTGAACTTGTATTTTATTATCTTTA
ACAATTTCACTGAGTAGCTCAATTGCATGAGGCGTTAGTTTAGACTCTGGCAGAACCCTA
GACATCAGATTATTTACGATATCAGGATATTTTGTGGTATTATCTTCTTGATTACGTGAA
TACACGTGACTTGCACCTGAAGGGAGAATATGAATTTGAGCCCTTTCACCATCATATTTA
TATTCACAAGTGAAATCACATTCTTCAAACCTCTTTAAAATTTCATATATTCCATGTGTA
GGAGAAGCTAACATTGGTTTTAGAGGAATACCTGGAGTGATTGTGCAAATTTGATCCAGG
GACTCATGACTTTTTGTTAAAAGAGCTTTTATAAGACGGCTGTAGTCTGGACAAACGCAA
TACGCCCTTTTAACATTCGCAACCGCAATATCCATTGTAACTTTCCACTGCTCACTAGAC
ATACCATTAGAAGCATTAATTATTCGCGTGCTTTTATCACTAACTTTAAAATGGAATGGC
GTCATAGCTACAGCCTGACCAAGAGCTGTAAGCACAGTTTGTTCAGCTAAGCCAATACGC
AATTTTCCTGATAAACTGCGTATAATATATTTCGTTTCAGGTTCTCGACAAGCCACTAGA
AGCGAGCGAATGATTCCCATTTTTTTGTTTTGAGCTGAATTTCCAGACATTGAAGCAATA
TCTTTCAATTTAGAAAATACTGATGAAATGGTCAATGGTTTTGGAGCTGACAGGATTTTC
TGACGTGATCTGATAGTTTCGGCGACAGCACCGAGATCACCATGTTGTTTTAAACTCGAA
CGCATATGTTCAATCCCAACACCTGTAGTTGCAGCCAAAGCCTTTAGTAGGATTGTTTCC
CCCACGCCTAGTTCCATCCCTTCATATGCGGGCCCCAGTCGGTTGAGGCAAAGGTAAACG
CAA

consensusID : consensus_10388#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 198
fasta sequence

                              [AGCTAAACGATCCCAAGCTACAACTTCCGAGTCAATGATACAACTCTCCAGTTTGTTTCCAACTATACCATTTGATTGAACTTGTATTTTATTATCTTTAACAATTTCACTGAGTAGCTCAATTGCATGAGGCGTTAGTTTAGACTCTGGCAGAACCCTAGACATCAGATTATTTACGCCTCGTGCCGAATTCTGGCC]

[-] EMBL CD077473             [AGCTAAACGATCCCAAGCTACAACTTCCGAGTCAATGATACAACTCTCCAGTTTGTTTCCAACTATACCATTTGATTGAACTTGTATTTTATTATCTTTAACAATTTCACTGAGTAGCTCAATTGCATGAGGCGTTAGTTTAGACTCTGGCAGAACCCTAGACATCAGATTATTTACGCCTCGTGCCGAATTCTGGCC]




>consensus_10388#1
AGCTAAACGATCCCAAGCTACAACTTCCGAGTCAATGATACAACTCTCCAGTTTGTTTCC
AACTATACCATTTGATTGAACTTGTATTTTATTATCTTTAACAATTTCACTGAGTAGCTC
AATTGCATGAGGCGTTAGTTTAGACTCTGGCAGAACCCTAGACATCAGATTATTTACGCC
TCGTGCCGAATTCTGGCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10388#0      CAGCCAANAATTTGGCACGAGGTCCTCATCGGCTACCATGGTCAATGGTACTGAATTAAC 60
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      TGATAGTAATTGTAAAAGAGCTGACACTGGTACATACGTTGATCCCAGTCATTCAACGAA 120
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      CCAGCTTAATGTGAACCAGGAATTAGCTGTTCCAGAATCTATTCAAGATATACATTTAGT 180
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      GAAAGTGAAGAAGAGAAACGAAAACTTTCTTAATAGTGGATGTGTAGGCGACACCGATCA 240
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      AAGTATTTACTTATCTTCTTTAGTAAATAAATATTTGGGTAACAAAGCTGTTGATAGCGG 300
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      AACAGTGGATACAGATAGTTCTACAGTAGTCGACTACAGCTTAGCGACACTGGATTATAT 360
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      GAAGCGACATGGTATAATTGAATGTTGTGGAGATAATAAATGTAAACAAAGTACTGCGCC 420
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      AGTAGCAAGTAGTACTCCGACCGCTAACCACGAAAAAGCATTACATAACTATACTTGTTT 480
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      TAACGACCCAAGGGATGATTCTGTGTGTACTCCATCGAGTGACCCGTCATCTTTCACTCC 540
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      GTTTGTGTCTAAAGATCCAAAATCACCTGACCTTACAACTGGAGAGTCGCTCCCAAATAT 600
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      AATGAACGAGTTGGGTCTAGATAAATTACAAATGACACAACATGCTGAAATATGCAACCG 660
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      TGACACTAAGTATCTGTCTACCTTGTCTGGTTGTTCATCAGAAAAAGATACTTCAATACA 720
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      ACCAACTNTAACAGTATCTGAATACTCACACATTTTTGATTATGAGCCCAACGTTATAAA 780
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      CAGTCCAATTCTCGACTTGGAACGATTACGATCGCTTCCCAAACTCCTGTGACTCTCGTT 840
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      GTGTATGAAGTGTACTTTGAAATAAATTTAAAACTTAAGATGCTTGTGATGGGTGTTACA 900
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      AAATGATGTATTTTGTATTTTAATTTATCATTTTTATAAATAATATTTTACAAATAATAT 960
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      CTTAGAAGGTGGTGCGTGTTTCCATAAAAATGATTATGAATTCAATACATATCTTCATCA 1020
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      TCATTGTTTCCTGTTTGTTTATTGCCATGCTGATTCTTTATCTGCTCTTGATTTTGATAA 1080
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      AGTTCATAAACTTGTTGGGCTGTTGTTGCGTCTTCGGGCTTTTTGTCATCTCGAATCCGA 1140
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      ACGAATCTCGGAAATCTCAGTGAAATGCCTTTTTGTGGATCCGCTAAACCAGCAGCGGCT 1200
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      TTGTGTCCAGGTGATATACTCAAATCGGCTGCCTTCACTTCCCAAACTTGAACAGGCTCA 1260
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      AACCATTGATCTGGAATTAAACTTATTGTGTATTGATAATAAGGTTTTGCTTTGTCAGTT 1320
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      GCATGGTTTTTGAAAAACTCCGAAAATGAAGCCAATTCATCATCCTTCATTCCTGTACCA 1380
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      ATTTTGCATATTGTCTGGTATTCTTCTGTATCTGGATCATAGCATGCCAGTAAGTAACCA 1440
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      CCGTAACGACCAGCACGTTTACCAGTTCCATAAAATCCACCTATTACCACCAAATCCAAT 1500
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      GTNATCACCAACACCTTCTAAATAGTCTTTTTTCAATTATAACCAGCTATGGGATCGTTC 1560
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      TGCGATTTCGTATGTAGAATTACGATCTAGTGTTTTTATCATTAAACCTTCACAGTTACC 1620
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      TTTGATTGCTTCGTCAAGAAAAGTCGCGATCTCATCTGTATCAGATGAATCAAGAGAGGT 1680
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      GGCCATCATGAACTCTCCAGAAATGCGCGGAAATACTTCTCTAAGTATCTCTCGACGTAT 1740
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      GCGTAACGGTTGTTCAATTAAAGATATACCATTTATAAACAGTATATCAAATACATAAAT 1800
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      GCATATTTGTACTTTCAGTGTAGATTCATCGACATCTTTACGCTTTCGCGTTGATAGGAC 1860
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      TTGGAATGGTAAAATATGTCCAGCTAAACGATCCCAAGCTACAACTTCCGAGTCAATGAT 1920
consensus_10388#1      ---------------------AGCTAAACGATCCCAAGCTACAACTTCCGAGTCAATGAT 39
                                            ***************************************

consensus_10388#0      ACAACTCTCCAGTT-GTTTCCAACTATACCATTTGATTGAACTTGTATTTTATTATCTTT 1979
consensus_10388#1      ACAACTCTCCAGTTTGTTTCCAACTATACCATTTGATTGAACTTGTATTTTATTATCTTT 99
                       ************** *********************************************

consensus_10388#0      AACAATTTCACTGAGTAGCTCAATTGCATGAGGCGTTAGTTTAGACTCTGGCAGAACCCT 2039
consensus_10388#1      AACAATTTCACTGAGTAGCTCAATTGCATGAGGCGTTAGTTTAGACTCTGGCAGAACCCT 159
                       ************************************************************

consensus_10388#0      AGACATCAGATTATTTACGATATCAGGATATTTTGTGGTATTATCTTCTTGATTACGTGA 2099
consensus_10388#1      AGACATCAGATTATTTACG-CCTCGTGCCGAATTCTGGCC-------------------- 198
                       *******************   **  *     ** ***                      

consensus_10388#0      ATACACGTGACTTGCACCTGAAGGGAGAATATGAATTTGAGCCCTTTCACCATCATATTT 2159
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      ATATTCACAAGTGAAATCACATTCTTCAAACCTCTTTAAAATTTCATATATTCCATGTGT 2219
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      AGGAGAAGCTAACATTGGTTTTAGAGGAATACCTGGAGTGATTGTGCAAATTTGATCCAG 2279
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      GGACTCATGACTTTTTGTTAAAAGAGCTTTTATAAGACGGCTGTAGTCTGGACAAACGCA 2339
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      ATACGCCCTTTTAACATTCGCAACCGCAATATCCATTGTAACTTTCCACTGCTCACTAGA 2399
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      CATACCATTAGAAGCATTAATTATTCGCGTGCTTTTATCACTAACTTTAAAATGGAATGG 2459
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      CGTCATAGCTACAGCCTGACCAAGAGCTGTAAGCACAGTTTGTTCAGCTAAGCCAATACG 2519
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      CAATTTTCCTGATAAACTGCGTATAATATATTTCGTTTCAGGTTCTCGACAAGCCACTAG 2579
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      AAGCGAGCGAATGATTCCCATTTTTTTGTTTTGAGCTGAATTTCCAGACATTGAAGCAAT 2639
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      ATCTTTCAATTTAGAAAATACTGATGAAATGGTCAATGGTTTTGGAGCTGACAGGATTTT 2699
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      CTGACGTGATCTGATAGTTTCGGCGACAGCACCGAGATCACCATGTTGTTTTAAACTCGA 2759
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      ACGCATATGTTCAATCCCAACACCTGTAGTTGCAGCCAAAGCCTTTAGTAGGATTGTTTC 2819
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      CCCCACGCCTAGTTCCATCCCTTCATATGCGGGCCCCAGTCGGTTGAGGCAAAGGTAAAC 2879
consensus_10388#1      ------------------------------------------------------------
                                                                                   

consensus_10388#0      GCAA 2883
consensus_10388#1      ----