cluster # 10476

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Schistosoma mansoni
cluster # 10476 cluster # 10476 Sequences # 17 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10476#0 length = 1158 sequences # 11

consensus_10476#1 length = 1052 sequences # 4
consensus_10476#2 length = 314 sequences # 2

consensusID : consensus_10476#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1158
fasta sequence

                              [NNTTATNNTAAGGAATATACANCGAAATTTTTACCATATATAATATACAAAAGTTATNTGACACATGTTGAATGAATTACTATGTTTATCAGTACGGTACAACTCGACGAGCATNTACTTTATAGTTATAACGTCCATCACTCGACTTATCAATTCTTGACTCTTTACCAGATTCGGACTTCTCTGTTTTATCCTGAGAAGTTAAATTAACATTGTTTACATGTCGACGATATTTAGAAGACTCCAAATCAGGATTATTACTATTAGGAGGATGTT-CATGATATTTTTCATGTGAACGACGATTACGAGTGATGGGATTATTTTGTTTTGATAAACGACGACCAGAGTCTAGTATTAATGAATCGTTTTTAATAAATGGAG-CATTTGTATCAGTT-AAGGGTGGTGTGATAGCAACATCAATCATATCTCCAATTGTAAATTGTACATCTTTTAACATGATGCGGTCTGTATCCGAAGGAG-AACCAGAACAAACTGTACCCAATTCACGCATTCTGTACACTGGTGATCGGTGATCCGGAAAAACCAAGGCGAAATCAAACAACGTTCCTC-TTCTACGGGATTCTGGGTTAACTTGTTTAACAAGAGATGCAAGTTCTCTTAGAGTAGCATCAAACCATGTATATACTTGGAGTTCATTTATTGGGGTACGACCCCTAGAATACTCCAAAACGTTATTATGTTTCTTTGTACTGCAGAACATTCTTAGTAACAGTGGACATGTCTTTTCGCGATTTACAGTGCTATCATCTGACACTGTCATTCTAGTAGGTCAGAAACAACCTTTCCAATATTAACGTGAAGAGCTAGTATATACCAGTTGGTTTATTGACGATTGTTCGATTATGTTGGGCAGCGACTTCAGATTTTTGGAGTTGTTTCCTTTAGTGTGCAACTCAACCAGACAACAGGGATAA-TTTTTGATAAATTATCAGAATAAGTAAAAATATGGAGAAGTTAGCGTTCAGTTTGAAGGTACGTTGCGTGCAGAGGTGGGTGTGAGGAAATCTGGATGAGAAAGAATCAAGAAAAAAGTTAGAACTAATTAATGAAGGCGACTGA-TAGCAAGTACCAATAAGACAAGCCTAAGACCAACACAAGCAAAAGGCCGCAAGCGACAGTACAGTACAGTGTAGTTTG]

[-] EMBL CD079462             [NNTTATNNTAAGGAATATACANCGAAATTTTTACCATATATAATATACAAAAGTTATNTGACACATGTTGAATGAATTACTATGTTTATCAGTACGGTACAACTCGACGAGCATNTACTTTATAGTTATAACGTCCATCACTCGACTTATCAATTCTTGACTCTTTACCAGATTCGGACTTCTCTGTTTTATCCTGAGAAGTTAAATTAACATTGTTTACATGTCGACGATATTTAGAAGACTCCAAATCAGGATTATTACTATTAGGAGGATGTT CATGATATTTTTCATGTGAACGACGATTACGAGTGATGGGATTATTTTGTTTTGATAAACGACGACCAGAGTCTAGTATTAATGAATCGTTTTTAATAAATGGAG CATTTGTATCAGTT AAGGGTGGTGTGATAGCAACATCAATCATATCTCCAATTGTAAATTGTACATCTTTTAACATGATGCGGTCTGTATCCGAAGGAG AACCAGAACAAACTGTACCCAATTCACGCATTCTGTACACTGGTGATCGGTGATCCGGAAAAACCAAGGCGAAATCAAACAACGTTCCTC TTCTACGGGATTCTGGGTTAACTTGTTTAACAAGAGATGCAAGTTCTCTTAGAGTAGCATCAAACCATGTATATACTTGGAGTTCATTTATTGGGGTACGACCCCTAGAATACTCCAAAACGTTATTATGTTTCTTTGTACTGCAGAACATTCTTAGTAACAGTGGACATGTCTTTTCGCGATTTA                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD143178             [                                                                                                                                                                                    TCTCTGTTTTATCCTGAGAAGTTAAATTAACATTGTTTACATGTCGACGATATTTAGAAGACTCCAAATCAGGATTGTTACTATTAGGAGGATGTT CATGATATTTTTCATGTGAACGACGATTGCGAGTGATGGGATTATTTTGTTTTGATAAACGACGACCAGAGTCTAGTATTAATGAATCGTTTTTAATAAATGGAG CATTTGTATCAGTT AAGGGTGGTGTGATAGCAACATCAATCATATCTCCAATTGTAAATTGTACATCTTTTAACATGATGCGGTCTGTATCCGAAGGAGAAACCAGAAC AACTGTACCCAATTCACGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL AW087121             [                                                                                                                                                                                               aCCTGAGAAGTTAAATTAACATTGTTTACATGTCGACGATATTTAGAAGACTCCAAATCAGGATTATTACTATTAGGAGGATGTTCCATGATATTTTTCATGTGAACGACGATTACGAGTGATGGGATTATTTTGTTTTGATAAACGACGACCAGAGTCTAGTATTAATGAATCGTTTTTAATAACTGGAGCCACTVNTACCAGTTCAAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL AI975518             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATCAAACAACGTTCCTCTTTCTACGGGATTCTGGGTTAACTTGTTTAACAAGAGATGCAAGTTCTCTTAGAGTAGCATCAAACCATGTATATACTTGGAGTTCATTTATTGGGGTACGACCCCTAGAATACTCCAAAACGTTATTATGTTTCTTTGTACTGCAGAACATTCTTAGTAACAGTGGACATGTCTTTTCGCGATTTACAGTGCTATCATCTGACACTGTCATTCTAGTAGGTCAGAAACAACCTTTCCAATATTAACGTGAAGAGCTAGTATATACCAGTTGGTTTATTGACGATTGTTCGATTATGTTGGGCAGCGACTTCAGATTTTTGGAGTTGTTTCCTTTAGTGTGCAACTCAACCAGACAACAGGGATAA TTTTTGATAAATTATCAGAATAAGTAAAAATATGGAGAAGTTAGCGTTCAGTTTGAAGGTACGTTGCGTGCAGAGGTGGGTGTGAGGAAATCTGGATGAGAAAGAATCAAGAAAAAAGTTAGAACTAATTAATGAAGGCGACTGA TAGCAAGTACCAATAAGACAAGCCTAAGACCAACACAAGCAAAAGGCCGCAAGCGACAGTACAGTACAGTGTAGTTTG]
[+] EMBL CD114014             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGGGTTAACTGGTTTAACAAGAGATGCAAGTTCTCTTAGAGTAGCATCAAACCATGTATATACTTGGAGTTCATTTATTGGGGTACGACCCCTAGAATACTCCAAAACGTTATTATGTTTCTTTGTACTGCAGAACATTCTTAGTAACAGTGGACATGTCTTTTCGCGATTTACAGTGCTATCATCTGACACTGTCATTCTAGTAGGTCAGAAACAACCTTTCCAATATTAACGTGAAGAGCTAGTATATACCAGTTGGTTTATTGACGATTGTTCGATTATGTTGGGCAGCGACTTCAGATTTTTGGAGTTGTTTCCTTTAGTGTGCAACCCAACCAGACAACAGGGATAATTTTTTGATAAATTATCAGAATAAGTAAAAATATGGAGAAGTTAGCGTTCAGTTTGAAGGTACGTTGCGTGCANAAGTGGGTGTGAGGAAATCTGGATGAGAAAAGATCAAGAAAAAAG TAGAACTAATT ATGAAAGCGACTGATTAGC AGTACCAATAAGACAAGC                                                       ]
[-] EMBL BF936080             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAACCATGTATATACTTGGAGTTCATTTATTGGGGTACGACCCCTAGAATACTCCAAAACGTTATTATGTTTCTTTGTACTGCAGAACATTCTTAGTAACAGTGGACATGTCTTTTCGCGATTTACAGTGCTATCATCTGACACTGTCATTCTAGTAGGTCAGAAACAACCTTTCCAATATTAACGTGAAGAGCTAGTATATACCAGTTGGTTTATTGACGATTGTTCGATTATGTTGGGCAGCGACTTCAGATTTTTGGAGTTGTTTCCTTTAGTGTGCAACTCAACCAGACAACAGGGATAA TTTTTGATAAATTATCAGAATAAGTAAAAATATGGAGAAGTTAGCGTTCAGTTTGAAGGTACGTTGCGTGCAGAGGTGGGTGTGAGGAAATCTGGATGAGAAAGAATCAAGAAAAAAGTTAGAACTAATTAATGAAGGCGACTGA TAGCAAGTACCAATAAGACAAGCCTAAGACCAACACAAGCAAAAGGCCGCAAGCGACAGTACAGTACAGTGTAGTTTG]
[-] EMBL CD113908             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATTTANTGGGGAACGACCCCTAGAATACTCCAAAACGTTATTATGTTTCTCGGGACTGCAGAACATTCTTAGTAACAGTGGACATGTCTTTTCGCGATTTACAGTGCTATCATCTGACACTGTCATTCTAGTAGGTCAGAAACAACCTTTCCAATATTAACGTGAAGAGCTAGTATATACCAGTTGGTTTATTGACGATTGTTCGATTATGTTGGGCAGCGACTTCAGATTTTTGGAGTTGTTTCCTTTAGTGTGCAACCCAACCAGACAACAGGGATAA TTTTTGATAAATTATCAGAATAAGTAAAAATATGGAGAAGTTAGCGTTCAGTTTGAAGGTACGTTGCGTGCAGAGGTGGGTGTGAGGAAATCTGGATGAGAAAGAATCAAGAAAAAAGTTAGAACTAATTAATGAAGGCGACTGA TAGCAAGTACCAATAAGACAAGCC                                                      ]
[+] EMBL CD116312             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCATCTGACACTGTCATTCTAGTAGGTCAGAAACAACCTTTCCAATATTAACGTGAAGAGCTAGTATATACCAGTTGGTTTATTGACGATTGTTCGATTATGTTGGGCAGCGACTTCAGATTTTTGGAGTTGTTTCCTTTAGTGTGCAACTCAACCAGACAACAGGGATAA TTTTTGATAAATTATCAGAATAAGTAAAAATATGGAGAAGTTAGCGTTCAGTTTGAAGGTACGTTGCGTGCAGAGGTGGGTGTGAGGAAATCTGGATGAGAAAGAATCAAGAAAAAAGTTAGAACTAATTAATGAAGGCGACTGA TAGCAAGTACCAATAAGACAAGCCTAAGACCAACACAAGCAAAAGGCCGCAAGCGACAGTACAGTACAGTGTAGT   ]
[+] EMBL CD071682             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAGATTTTTGGAGTTGTTTCCTGTAGTGTGCAACTCAACCAGACAACAGGGATAA TTTTTGATAAATTATCAGAATAAGTAAAAATATGGAGAAGTTAGCGTTCAGTTTGAAGGTACGTTGCGTGCAGAGGTGGGTGTGAGGAAATTTGGATGAGAAAGAAT                                                                                                                     ]
[+] EMBL CD158644             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGGAGTTGTTTCCTGTAGTGTGCAACTCAACCAGACAACAGGGATAA TTTTTGATAAATTATCAGAATAAGTAAAAATATGGAGAAGTTAGCGTTCAGTTTGAAGGTACGTTGCGTGCAGAGGTGGGTGTGAGGAAATTTGGATGAGAAAGAATGAAGAAAAAAGTTAGAACTAATTAATGAAGGCGACTGA TAGCAAGTACCAATAAGACAAGCCTAAGACCAACACAAGCAAAAGGCCGCAAGCGACAGTACAGTGCAGTG       ]
[-] EMBL CD158605             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGAGTTGTTTCCTGTAGTGTGCAACTCAACCAGACAACAGGGATAA TTTTTGATAAATTATCAGAATAAGTAAAAATATGGAGAAGTTAGCGTTCAGTTTGAAGGTACGTTGCGTGCAGAGGTGGGTGTGAGGAAATTTGGATGAGAAAGAATGAAGAAAAAAGTTAGAACTAATTAATGAAGGCGACTGA TAGCAAGTACCAATAAGACAAGCCTAAGACCAACACAAGCAAAAGGCCGCAAGCGACAGTACAGTGCAGTGT      ]




>consensus_10476#0
NNTTATNNTAAGGAATATACANCGAAATTTTTACCATATATAATATACAAAAGTTATNTG
ACACATGTTGAATGAATTACTATGTTTATCAGTACGGTACAACTCGACGAGCATNTACTT
TATAGTTATAACGTCCATCACTCGACTTATCAATTCTTGACTCTTTACCAGATTCGGACT
TCTCTGTTTTATCCTGAGAAGTTAAATTAACATTGTTTACATGTCGACGATATTTAGAAG
ACTCCAAATCAGGATTATTACTATTAGGAGGATGTTCATGATATTTTTCATGTGAACGAC
GATTACGAGTGATGGGATTATTTTGTTTTGATAAACGACGACCAGAGTCTAGTATTAATG
AATCGTTTTTAATAAATGGAGCATTTGTATCAGTTAAGGGTGGTGTGATAGCAACATCAA
TCATATCTCCAATTGTAAATTGTACATCTTTTAACATGATGCGGTCTGTATCCGAAGGAG
AACCAGAACAAACTGTACCCAATTCACGCATTCTGTACACTGGTGATCGGTGATCCGGAA
AAACCAAGGCGAAATCAAACAACGTTCCTCTTCTACGGGATTCTGGGTTAACTTGTTTAA
CAAGAGATGCAAGTTCTCTTAGAGTAGCATCAAACCATGTATATACTTGGAGTTCATTTA
TTGGGGTACGACCCCTAGAATACTCCAAAACGTTATTATGTTTCTTTGTACTGCAGAACA
TTCTTAGTAACAGTGGACATGTCTTTTCGCGATTTACAGTGCTATCATCTGACACTGTCA
TTCTAGTAGGTCAGAAACAACCTTTCCAATATTAACGTGAAGAGCTAGTATATACCAGTT
GGTTTATTGACGATTGTTCGATTATGTTGGGCAGCGACTTCAGATTTTTGGAGTTGTTTC
CTTTAGTGTGCAACTCAACCAGACAACAGGGATAATTTTTGATAAATTATCAGAATAAGT
AAAAATATGGAGAAGTTAGCGTTCAGTTTGAAGGTACGTTGCGTGCAGAGGTGGGTGTGA
GGAAATCTGGATGAGAAAGAATCAAGAAAAAAGTTAGAACTAATTAATGAAGGCGACTGA
TAGCAAGTACCAATAAGACAAGCCTAAGACCAACACAAGCAAAAGGCCGCAAGCGACAGT
ACAGTACAGTGTAGTTTG

consensusID : consensus_10476#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1052
fasta sequence

                              [TACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATATTACTTATTTA-TTT-A-GGAATATACAACGAAA-T-T-TACCATATATAATATACAAAAGTTATTTGACACATGTTGAATGAATTACTATGTTTATCAGTACGGTACAACTCGACGAGCATTTACTTTATAGTTATAACGT-CCATCACTCGACTTATCAATTCTTGACTC-TTTACCAGATTCGGACTTCTCTGTTTTATCCTGAGAAGTTAAATTAACATTGTTTACATGTCGACGATATTTAGAAGACTCCAAATCAGGATTATTACTATTAGGAGGATGTTCATGATATTTTTCATGTGAACGACGATTACGAGTGATGGGATTATTTTGTTTTGATAAACGACGACCAGAGTCTAGTATTAATGAATCGTTTTTAATAAATGGAGCATTTGTATCAGTTAAGGGTGGTGTGATAGCAACATCAATCATATCTCCAATTGTAAATTGTACATCTTTTAACATGATGCGGTCTGTATCCGAAGGAGAACCAGAACAAACTGTACCCAATTCACGCATTCTGTACACTGGTGATCGGTGATCCGGAAAAACCAAGGCGAAATCAAACAACGTTCCTCTTCTACGGGATTCTGGGTTAACTTGTTTAACAAGAAGATGCAAGTTCTCTTAGAGTAGCATCAAACCTTTAAAGTAAGACAGACGTAAGAGAACTGAAATTAGATATATCAACTTAGAACTTTGCGCAAAGGCGCACGGTTCCCAGTTATCTATTTATGTGACATCTGAATGTCACCCGTGATTTACATGGAAAGGTCGCTTAATGTTGCAAGAGGTCATGGAGTAGGAATCGCAGTCGGTGTGGTATACGAAAGAAACGACTAAATGACTACTATTTGATTGGCGATTTTGCAAGATCCATATAGTGAGTTGACAAAACTAGTAATCTTACCAGGTCAATGATATTTCGTAACAAAATATCAGGATACACAGCTAACTAGAGTAGTTTATCACCTCGTGCCGAATTTTGGCCTCGGAGGG]

[+] EMBL AA819925             [TACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATATTACTTATTTA TTTAA GGAATATACAACGAAATT T TACCATATATAATATACAAAAGTTATTTGACACATGTTGAATGAATTACTATGTTTATCAGTACGGTACAACTCGACGAGCATTTACTTTATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD073734             [                                                               TTATTTA TTT ATTGAATATACAACGAAA T TCTACCATATATAATATACAAAAGTTATTTGACACATGTTGAATGAATTACTATGTTTATCAGTACGGTACAACTCGACGAGCATTTACTTTATAGTTATAACGT CCATCACTCGACTTATCAATTCTTGACTC TTTACCAGATTCGGACTTCTCTGTTTTATCCTGAGAAGTTAAATTAACATTGTTTACATGTCGACGATATTTAGAAGACTCCAAATCAGGATTATTACTATTAGGAGGATGTTCATGATATTTTTCATGTGAACGACGATTACGAGTGATGGGATTATTTTGTTTTGATAAACGACGACCAGAGTCTAGTATTAATGAATCGTTTTTAATAAATGGAGCATTTGTATCAGTTAAGGGTGGTGTGATAGCAACATCAATCATATCTCCAATTGTAAATTGTACATCTTTTAACATGATGCGGTCTGTATCCGAAGGAGAACCAGAACAAACTGTACCCAATTCACGCATTCTGTACACTGGTGATCGGTGATCCGGAAAAACCAAGGCGAAATCAAACAACGTTCCTCTTCTACGGGATTCTGGGTTAACTTGTTTAACAAGAAGATGCA                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD073983             [                                                               TTATTTATTTT A TGAATATACAACGAAA TCT TACCATATATAATATACAAAAGTTATTTGACACATGTTGAATGAATTACTATGTTTATCAGTACGGTACAACTCGACGAGCATTTACTTTATAGTTATAACGT CCATCACTCGACTTATCAATTCTTGACTC TTTACCAGATTCGGACTTCTCTGTTTTATCCTGAGAAGTTAAATTAACATTGTTTACATGTCGACGATATTTAGAAGACTCCAAATCAGGATTATTACTATTAGGAGGATGTTCATGATATTTTTCATGTGAACGACGATTACGAGTGATGGGATTATTTTGTTTTGATAAACGACGACCAGAGTCTAGTATTAATGAATCGTTTTTAATAAATGGAGCATTTGTATCAGTTAAGGGTGGTGTGATAGCAACATCAATCATATCTCCAATTGTAAATTGTACATCTTTTAACATGATGCGGTCTGTATCCGAAGGAGAACCAGAACAAACTGTACCCAATTCACGCATTCTGTACACTGGTGATCGGTGATCCGGAAAAACCAAGGCGAAATCAAACAACGTTCCTCTTCTACGGGATTCTGGGTTAACTTGTTTAACAAG                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD079726             [                                                                   TTA TTA A GGAATA NCANNGAAA T T T CCATATTTAAAAT C AAAG TATTTGACACATG TGAATG ATTACTATGTTTATCAGTAC GTACAACTCGACGAGCA TTACTTTATAGTTAT ACGTCCCATCACTCGACTNATCAATTC TGACTCTTTTACCAGATTCGGACTTCTCTG TTTATCCTGAGAAGTTAATTTAACATTGTTTACATGTCGACGATATTTAGAAGACTCCAAATCAGGATTATTACTATTAGGAGGATGTTCATGATATTTTTCATGTGAACGACGATTACGAGTGATGGGATTATTTTGTTTTGATAAACGACGACCAGAGTCTAGTATTAATGAATCGTTTTTAATAAATGGAGCATTTGTATCAGTTAAGGGTGGTGTGATAGCAACATCAATCATATCTCCAATTGTAAATTGTACATCTTTTAACATGATGCGGTCTGTATCCGAAGGAGAACCAGAACAAACTGTACCCAATTCACGCATTCTGTACACTGGTGATCGGTGATCCGGAAAAACCAAGGCGAAATCAAACAACGTTCCTCTTCTACGGGATTCTGGGTTAACTTGTTTAACAAG AGATGCAAGTTCTCTTAGAGTAGCATCAAACCTTTAAAGTAAGACAGACGTAAGAGAACTGAAATTAGATATATCAACTTAGAACTTTGCGCAAAGGCGCACGGTTCCCAGTTATCTATTTATGTGACATCTGAATGTCACCCGTGATTTACATGGAAAGGTCGCTTAATGTTGCAAGAGGTCATGGAGTAGGAATCGCAGTCGGTGTGGTATACGAAAGAAACGACTAAATGACTACTATTTGATTGGCGATTTTGCAAGATCCATATAGTGAGTTGACAAAACTAGTAATCTTACCAGGTCAATGATATTTCGTAACAAAATATCAGGATACACAGCTAACTAGAGTAGTTTATCACCTCGTGCCGAATTTTGGCCTCGGAGGG]




>consensus_10476#1
TACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATAT
TACTTATTTATTTAGGAATATACAACGAAATTTACCATATATAATATACAAAAGTTATTT
GACACATGTTGAATGAATTACTATGTTTATCAGTACGGTACAACTCGACGAGCATTTACT
TTATAGTTATAACGTCCATCACTCGACTTATCAATTCTTGACTCTTTACCAGATTCGGAC
TTCTCTGTTTTATCCTGAGAAGTTAAATTAACATTGTTTACATGTCGACGATATTTAGAA
GACTCCAAATCAGGATTATTACTATTAGGAGGATGTTCATGATATTTTTCATGTGAACGA
CGATTACGAGTGATGGGATTATTTTGTTTTGATAAACGACGACCAGAGTCTAGTATTAAT
GAATCGTTTTTAATAAATGGAGCATTTGTATCAGTTAAGGGTGGTGTGATAGCAACATCA
ATCATATCTCCAATTGTAAATTGTACATCTTTTAACATGATGCGGTCTGTATCCGAAGGA
GAACCAGAACAAACTGTACCCAATTCACGCATTCTGTACACTGGTGATCGGTGATCCGGA
AAAACCAAGGCGAAATCAAACAACGTTCCTCTTCTACGGGATTCTGGGTTAACTTGTTTA
ACAAGAAGATGCAAGTTCTCTTAGAGTAGCATCAAACCTTTAAAGTAAGACAGACGTAAG
AGAACTGAAATTAGATATATCAACTTAGAACTTTGCGCAAAGGCGCACGGTTCCCAGTTA
TCTATTTATGTGACATCTGAATGTCACCCGTGATTTACATGGAAAGGTCGCTTAATGTTG
CAAGAGGTCATGGAGTAGGAATCGCAGTCGGTGTGGTATACGAAAGAAACGACTAAATGA
CTACTATTTGATTGGCGATTTTGCAAGATCCATATAGTGAGTTGACAAAACTAGTAATCT
TACCAGGTCAATGATATTTCGTAACAAAATATCAGGATACACAGCTAACTAGAGTAGTTT
ATCACCTCGTGCCGAATTTTGGCCTCGGAGGG

consensusID : consensus_10476#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 314
fasta sequence

                              [GGAGTGTTTNCCTNTAGTGTGCAACTCAACCAGACAACAGGGATAATTTTTGATAAATTATCAGAATAAGTAAAAATATGGAGAAGTTAGCGTTCAGTTTGAAGGTACGTTGCGTGCAGAGGTGGGTGTGAGGAAATCTGGATGAGAAAGAATCAAGAAAAAAGTTAGACTGATAATTTATTGAGGATATGGAATGCACTCACACTAATTAATG-AGGCGACTGATAGCAAGTACCAATAAGACAAGCCTAAGACCAACACAAGCAAAAGGCCGCAAGCGACAGTACAGTACAGTGTAGTTTGTCCAGCCGCTCA]

[-] EMBL CD136371             [GGAGTGTTTNCCTNTAGTGTGCAACTCAACCAGACAACAGGGATAATTTTTGATAAATTATCAGAATAAGTAAAAATATGGAGAAGTTAGCGTTCAGTTTGAAGGTACGTTGCGTGCAGAGGTGGGTGTGAGGAAATCTGGATGAGAAAGAATCAAGAAAAAAGTTAGACTGATAATTTATTGAGGATATGGAATGCACTCACACTAATTAATG AGGCGACTGATAGCAAGTACCAATAAGACAAGCCTAAGACCAACACAAGCAAAAGGCCGCAAGCGACAGTACAGTACAGTGTAGTTTGTCCAGCCGCTCA]
[+] EMBL CD193700             [                                                                                                 TTTGAAGGTACGTTGCGTGCAGAGGTGGGTGTGAGGAAATCTGGATGAGAAAGAATTAAGAAAAAAGTTAGACTGATAATTTATTGAGGATATGGAATGCACTCACACTAATTAATGAAGGCGACTGATAGCAAGTACCAATAAGACAAGCCTAAGACCAACACAAGCAAAAGGCCGCAAGCGACAGTACAGTACAGTG                   ]




>consensus_10476#2
GGAGTGTTTNCCTNTAGTGTGCAACTCAACCAGACAACAGGGATAATTTTTGATAAATTA
TCAGAATAAGTAAAAATATGGAGAAGTTAGCGTTCAGTTTGAAGGTACGTTGCGTGCAGA
GGTGGGTGTGAGGAAATCTGGATGAGAAAGAATCAAGAAAAAAGTTAGACTGATAATTTA
TTGAGGATATGGAATGCACTCACACTAATTAATGAGGCGACTGATAGCAAGTACCAATAA
GACAAGCCTAAGACCAACACAAGCAAAAGGCCGCAAGCGACAGTACAGTACAGTGTAGTT
TGTCCAGCCGCTCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10476#0      NNTTATNNTAAGGAATATACANCGAAATTTTTACCATATATAATATACAAAAGTTATNTG 60
consensus_10476#2      ------------------------------------------------------------
consensus_10476#1      ------------------------------------------------------------
                                                                                   

consensus_10476#0      ACACATGTTGAATGAATTACTATGTTTATCAGTACGGTACAACTCGACGAGCATNTACTT 120
consensus_10476#2      ------------------------------------------------------------
consensus_10476#1      ------------------------------------------------------------
                                                                                   

consensus_10476#0      TATAGTTATAACGTCCATCACTCGACTTATCAATTCTTGACTCTTTACCAGATTCGGACT 180
consensus_10476#2      ------------------------------------------------------------
consensus_10476#1      ------------------------------------------------------------
                                                                                   

consensus_10476#0      TCTCTGTTTTATCCTGAGAAGTTAAATTAACATTGTTTACATGTCGACGATATTTAGAAG 240
consensus_10476#2      ------------------------------------------------------------
consensus_10476#1      ------------------------------------------------------------
                                                                                   

consensus_10476#0      ACTCCAAATCAGGATTATTACTATTAGGAGGATGTTCATGATATTTTTCATGTGAACGAC 300
consensus_10476#2      ------------------------------------------------------------
consensus_10476#1      ------------------------------------------------------------
                                                                                   

consensus_10476#0      GATTACGAGTGATGGGATTATTTTGTTTTGATAAACGACGACCAGAGTCTAGTATTAATG 360
consensus_10476#2      ------------------------------------------------------------
consensus_10476#1      ------------------------------------------------------------
                                                                                   

consensus_10476#0      AATCGTTTTTAATAAATGGAGCATTTGTATCAGTTAAGGGTGGTGTGATAGCAACATCAA 420
consensus_10476#2      ------------------------------------------------------------
consensus_10476#1      ------------------------------------------------------------
                                                                                   

consensus_10476#0      TCATATCTCCAATTGTAAATTGTACATCTTTTAACATGATGCGGTCTGTATCCGAAGGAG 480
consensus_10476#2      ------------------------------------------------------------
consensus_10476#1      ------------------------------------------------------------
                                                                                   

consensus_10476#0      AACCAGAACAAACTGTACCCAATTCACGCATTCTGTACACTGGTGATCGGTGATCCGGAA 540
consensus_10476#2      ------------------------------------------------------------
consensus_10476#1      ----------------------------------TACGGTAATGCAGCTGCATGGCATGT 26
                                                                                   

consensus_10476#0      AAACCAAGGCGAAATCAAACAACGTTCCTCTTCTACGGGATTCTGGGTTAACTTGTTTAA 600
consensus_10476#2      ------------------------------------------------------------
consensus_10476#1      TTTTTTTTTTTTTTTTTTTTTTTTTTTTATATATTACTTATTTATTTAGGAATATACAAC 86
                                                                                   

consensus_10476#0      CAAGAGATGCAAGTTCTCTTAGAGTAGCATCAAACCATGTATATACTTGGAGTTCATTTA 660
consensus_10476#2      ------------------------------------------------------------
consensus_10476#1      GAAATTTACCATATATAATATACAAAAGTTATTTGACACATGTTGAATGAATTACTATGT 146
                                                                                   

consensus_10476#0      TTGGGGTACGACCCCTAGAATACTCCAAAACGTTATTATGTTTCTTTGTACTGCAGAACA 720
consensus_10476#2      ------------------------------------------------------------
consensus_10476#1      TTATCAGTACGGTACAACTCGACGAGCATTTACTTTATAGTTATAACGTCCATCACTCGA 206
                                                                                   

consensus_10476#0      TTCTTAGTAACAGTGGACATGTCTTTTCGCGATTTACAGTGCTATCATCTGACACTGTCA 780
consensus_10476#2      ------------------------------------------------------------
consensus_10476#1      CTTATCAATTCTTGACTCTTTACCAGATTCGGACTTCTCTGTTTTATCCTGAGAAGTTAA 266
                                                                                   

consensus_10476#0      TTCTAGTAGGTCAGAAACAACCTTTCCAATATTAACGTGAAGAGCTAGTATATACCAGTT 840
consensus_10476#2      ------------------------------------------------------------
consensus_10476#1      ATTAACATTGTTTACATGTCGACGATATTTAGAAGACTCCAAATCAGGATTATTACTATT 326
                                                                                   

consensus_10476#0      GGTTTATTGACGATTGTTCGATTATGTTGGGCAGCGACTTCAGATTTTTGGAGTTGTTTC 900
consensus_10476#2      -------------------------------------------------GGAGTGTTTNC 11
consensus_10476#1      AGGAGGATGTTCATGATATTTTTCATGTGAACGACGATTACGAGTGATGGGATTATTTTG 386
                                                                        *** *  **  

consensus_10476#0      CTTTAGTGTGCAACTCAACCAGACAACAG-------GGATAATTTTTGATAAAT----TA 949
consensus_10476#2      CTNTAGTGTGCAACTCAACCAGACAACAG-------GGATAATTTTTGATAAAT----TA 60
consensus_10476#1      TTTTGATAAACGAC--GACCAGAGTCTAGTATTAATGAATCGTTTTTAATAAATGGAGCA 444
                        * *  *   * **   ******    **       * **  ***** ******     *

consensus_10476#0      TCAGAATAAGT-AAAAATATGGAGAAGTTAGCGTTCA----GTTTGAAGGTACGTTGCGT 1004
consensus_10476#2      TCAGAATAAGT-AAAAATATGGAGAAGTTAGCGTTCA----GTTTGAAGGTACGTTGCGT 115
consensus_10476#1      TTTGTATCAGTTAAGGGTGGTGTGATAGCAACATCAATCATATCTCCAATTGTAAATTGT 504
                       *  * ** *** **   *   * **    * * *  *     * *  *  *       **

consensus_10476#0      GCAGAGGTGGGTGTGAGGAAATCTGGAT--GAGAAAGAATCAAGAAAAAAGTTAGA---- 1058
consensus_10476#2      GCAGAGGTGGGTGTGAGGAAATCTGGAT--GAGAAAGAATCAAGAAAAAAGTTAGACTGA 173
consensus_10476#1      ACATCTTTTAACATGATGCGGTCTGTATCCGAAGGAGAACCAGAACAAACTGTACCCAAT 564
                        **    *     *** *   **** **  **   **** **  * ***   **      

consensus_10476#0      -------------------------------ACTAATTAATGAAGGCGACTGATAGCAA- 1086
consensus_10476#2      TAATTTATTGAGGATA-TGGAATGCACTCACACTAATTAATGA-GGCGACTGATAGCAA- 230
consensus_10476#1      TCACGCATTCTGTACACTGGTGATCGGTGATCCGGAAAAACCAAGGCGAAATCAAACAAC 624
                                                       *  *  **  * *****     * *** 

consensus_10476#0      GTACCAATAAGACAAGCCTA-AGACCAACACA---AGCAAAAGGCCGCAAGCGACAGTAC 1142
consensus_10476#2      GTACCAATAAGACAAGCCTA-AGACCAACACA---AGCAAAAGGCCGCAAGCGACAGTAC 286
consensus_10476#1      GTTCCTCTTCTACGGGATTCTGGGTTAACTTGTTTAACAAGAAGATGCAAGTTCTCTTAG 684
                       ** **  *   **  *  *   *   ***      * *** * *  *****      ** 

consensus_10476#0      AGTACAGTGTAGTTTG-------------------------------------------- 1158
consensus_10476#2      AGTACAGTGTAGTTTGTCCAGCCGCTCA-------------------------------- 314
consensus_10476#1      AGTAGCATCAAACCTTTAAAGTAAGACAGACGTAAGAGAACTGAAATTAGATATATCAAC 744
                       ****   *  *   *                                             

consensus_10476#0      ------------------------------------------------------------
consensus_10476#2      ------------------------------------------------------------
consensus_10476#1      TTAGAACTTTGCGCAAAGGCGCACGGTTCCCAGTTATCTATTTATGTGACATCTGAATGT 804
                                                                                   

consensus_10476#0      ------------------------------------------------------------
consensus_10476#2      ------------------------------------------------------------
consensus_10476#1      CACCCGTGATTTACATGGAAAGGTCGCTTAATGTTGCAAGAGGTCATGGAGTAGGAATCG 864
                                                                                   

consensus_10476#0      ------------------------------------------------------------
consensus_10476#2      ------------------------------------------------------------
consensus_10476#1      CAGTCGGTGTGGTATACGAAAGAAACGACTAAATGACTACTATTTGATTGGCGATTTTGC 924
                                                                                   

consensus_10476#0      ------------------------------------------------------------
consensus_10476#2      ------------------------------------------------------------
consensus_10476#1      AAGATCCATATAGTGAGTTGACAAAACTAGTAATCTTACCAGGTCAATGATATTTCGTAA 984
                                                                                   

consensus_10476#0      ------------------------------------------------------------
consensus_10476#2      ------------------------------------------------------------
consensus_10476#1      CAAAATATCAGGATACACAGCTAACTAGAGTAGTTTATCACCTCGTGCCGAATTTTGGCC 1044
                                                                                   

consensus_10476#0      --------
consensus_10476#2      --------
consensus_10476#1      TCGGAGGG 1052