cluster # 10579

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Schistosoma mansoni
cluster # 10579 cluster # 10579 Sequences # 18 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10579#0 length = 1684 sequences # 11
consensus_10579#1 length = 629 sequences # 1

consensus_10579#2 length = 431 sequences # 5
consensus_10579#3 length = 322 sequences # 1

consensusID : consensus_10579#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1684
fasta sequence

                              [CTACGAATCATCACCAACCTTTGATTACTGGATGTACTGCACAACCAATCCAAACTGTCCCAAACACTACGACTCTGCGTTTCCGAGCAGTTCCA-GGTACTGCGACATTAGTGCAGTCACAACCACAACAAGTACAGCATTTCTATAATACGACTCAACTTGGTCCAGATTCTGCGTTCAGTGGCAATGATTCTGGATCTAACATGTTTGTTTCAGCTACTGGTCCCAGTATATTGTCTGTAGGAAATCAGCAGTCGCAAGTTCTTAGTGCCGTTCCTCAGCGCTTAACTCCAGCTTCAAGTTCAAGTATTGGTCGTCAGTCCTCTACACCACAAGCAGCTATTGTGCACTTTAGATCACAGCAACACCAACCCTTGAGTGGTACAGTAAATCCTATGCAGCCTCATATAATACTTACTAATACAACCGCTCCTGCAAGTGGCCCAACCCACCCTCTCCCACCAGTCCCAACCACAGCTTGTTTCTGCCACTTCCAATGGTCGTCAAGTTGTTGCTTTAATGACCCACCAAAATATTCCTCATACAAATGTATCTGATCCAGGAGCCCCTTTACGTGATTCTGGTTCCAATAATTCTGCTAATAACCTTGGCAACGGCATACAATGATTTCTGTCTTTAAACATAGTGAGAACACACTTTCATGTTGCTGGCTGTGTAAGTAATTTAAAAGCTGTTTTTGAGCTGACATGACATGGTCATGTTTTCTGTATCAATCCAATTACTAGTTAATTTATCCTAAATTGCACTGATAAAAACACTTATACGAATTGCAGGCTCAAACTATTATTCAGGGAGGGGACTGTTAATAAATGCTCCGTGTCCCTTCGCTCTAACAACTTTGTGATTCGTTAAACCTTAACGTCGCATTTATGTTAATTTTGATTCCTGAATTTTCAAGCCAGTTGTGTGCATTCTTTCACTTTGCTCCGGTGGTCGTTCGCTCTGTTTGGTTGCTGCGCACATTATTTTGATACATTTTGTAGTAACCCCTCCCTGCTTGACAGTGCTTACACATCAAATGAGTTCATAATTCCCGAGGATATCCAAATTATTTTTCCCCGTTGTCTTTATTTCCTGTTTATTACGGTTTTCGGAACAACTTCACAACTTCATCAGATCTTACGAAATTCACTGGTAACGAATGATTTGTTTACTTTTAGATTCAAATTTGTTTTCTTATTTAAATGTATAAGCTAATCTTTTGTGGCTCATATTTTTCTTTTCTTCAGCTTGTTCTATCAAATCAGGTTGAAGTGTGTTAAATATTTATCACTGTACACATATATGTCAGAGTTTTAGAAACTGGTTTGGTTGCGCCTNCATTTGTTCAATATCCCCAG-AATAGTTTAACATTGCCTTT-CCCCCAAAACATCTTTATTCGAACTTCGGGGT-ATATAGACTTGTGTTG-ATATAGCCGAAGAAATTATCTCCTAATACCCTTCTTATTGCCTAGCTTTGACTGCGACCATACTTGTGCATTAACATTTTCTTCATCAATTCCTCCATATAAAAAAATACTTGCTATGTAATGCTTAAATCCGCCGTGGCTTTCTGATTTCCCAACTAAATTTTCATTCTTTTACCTAAACGCTCTATGGACCAAAATCTTACTGTTGAAAATTTTTTTTAAGTTATGCTTTGCTTTAAAGAAAGATGATTGCTG]

[-] EMBL CD188686             [CTACGAATCATCACCAACCTTTGATTACTGGATGTACTGCACAACCAATCCAAACTGTCCCAAACACTACGACTCTGCGTTTCCGAGCAGTTCCA GGTACTGCGACATTAGTGCAGTCACAACCACAACAAGTACAGCATTTCTATAATACGACTCAACTTGGTCCAGATTCTGCGTTCAGTGGCAATGACTCTGGATCTAACATGTTTGTTTCAGCTACTGGTCCCAGTATATTGTCTGTAGGAAATCAGCAGTCGCAAGTTCTTAGTGCCGTTCCTCAGCGCTTAACTCCAGCTTCAAGTTCAAGTATTGGTCGTCAGTCCTCTACACCACAAGCAGCTATTGTGCACTTTAGATCACAGCAACACCAACCCTTGAGTGGTACAGTAAATCCTATGCAGCCTCATATAATACTTACTAATACAACCGCTCCTGCAAGTGGCCCAACCCACCTCCTCCCAaacaccc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD131099             [                    TTGATTACTGGATGTACTGCACAACCAATCCAAACTGTCCCAAACACTACGACTCTGCGTTTCCGAGCAGTTCCA GGTACTGCGACATTAGTGCAGTCACAACCACAACAAGTACAGCATTTCTATAATACGACTCAACTTGGTCCAGATTCTGCGTTCAGTGGCAATGATTCTGGATCTAACATGTTTGTTTCAGCTACTGGTCCCAGTATATTGTCTGTAGGAAATCAGCAGTCGCAAGTTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD199291             [                                                 CCAAACTGTCCCAAACACTACGACTCTGCGTTTCCGAGCAGTTCCA GGTACTGCGACATTAGTGCAGTCACAACCACAACAAGTACAGCATTTCTATAATACGACTCAACTTGGTCCAGATTCTGCGTTCAGTGGCAATGATTCTGGATCTAACATGTTTGTTTCAGCTACTGGTCCCAGTATATTGTCTGTAGGAAATCAGCAGTCGCAAGTTCTTAGTGCCGTTCCTCAGCGCTTAACTCCAGCTTCAAGTTCAAGTATTGGTCGTCAGTCCTCTACACCACAAGCAGCTATTGTGCACTTTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD199271             [                                                                     CGACTCTGCGTTTCCGAGCAG TCCAGGGTACTGCGACATTAGTGCAGTCACAACCACAACAAGTACAGCATTTCTATAATACGACTCAACTTGGTCCAGATTCTGCGTTCAGTGGCAATGATTCTGGATCTAACATGTTTGTTTCAGCTACTGGTCCCAGTATATTGTCTGTAGGAAATCAGCAGTCGCAAGTTCTTAGTGCCGTTCCTCAGCGCTTAACTCCAGCTTCAAGTTCAAGTATTGGTCGTCAGTCCTCTACACCACAAGCAGCTATTGTGCACTTTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD125211             [                                                                                                                                                                                                                                                                                                                                                                        CAGCAACACCAACCCTTGAGTGGTACAGTAAATCCTATGCAGCCTCATATAATACTTACTAATACAACCGCCCCTGCAAGTGGCCCAACCCA CCTCTCCCACCAGTCCCAACCACAGCTTGTTTCTGCCACTTCCAATGGTCGTCAAGTTGTTGCTTTAATGACCCACCAAAATATTCCTCATACAAATGTATCTGATCCAGGAGCCCCTTTGCGTGATTCTGGTTCCAATAATTCTGCTAATAACCTTGGTAACGGCATACAATGATTTCTGTCCTTAAACATAGTGAGAACACACTTTCATGTTGCTGGCTGTGTCAGTCATTTACAAGCTGTTTTTGAGCTGACATGACATGGTCATGTTTTCTGTATCCATCCAATTACTAGTTTATTTATCCTAAATTGCCTTGATTAAAACACTTATACGAATTGCACGCTCACACTATTTTTCCCGGCGGGGCCCGCTActc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD165032             [                                                                                                                                                                                                                                                                                                                                                                                                 CAGTAAATCCTATGCAGCCTCATATAATACTTACTAATACAACCGCTCCTGCAAGTGGCCCAACCCA CCTCTCCCACCAGTCCCAACCACAGCTTGTTTCTGCCACTTCCAATGGTCGTCAAGTTGTTGCTTTAATGACCCACCAAAATATTCCTCATACAAACGTATCTGATCCAGGAGCCCCTTTACGTGATTCTGGTTCCAATAATTCTGCTAATAACCTTGGCAACGGCATACAATGATTTCTGTCTTTAAACATAGTGAGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD201830             [                                                                                                                                                                                                                                                                                                                                                                                                                      ATATAATACTTACTAATACAACCGCTCCTGCAAGTGGCCCAACCCACCCTCTCCCACCAGTCCCAACCACAGCTTGTTTCTGCCACTTCCAATGGTCGTCAAGTTGTTGCTTTAATGACCCACCAAAATATTCCTCATACAAATGTATCTGATCCAGGAGCCCCTTTACGTGATTCTGGTTCCAATAATTCTGCTAATAACCTTGGCAGCGGCATACAATGATTTCTGTCTTTAAACATAGTGAGAACACACTTTCATGTTGCTGGCTGTGTAAGTAATTTAAAAGCTGTTTTTGAGCTGACATGACATGGTCATGTTTTCTGTATCAATCCAATTACTAGTTAATTTATCCTAAATTGCACTGATAAAAACACTTATACGAATTGCAGGCTCAAACTATTATTCAGGGAGGGGACTGTTAATAAATGCTCCGTGTCCCTTCGCTCTAACAACTTTGTGATTCGTTAAACCTTAACGTCGCATTTATGTTAATTTTGATTCCTGAATTTTCAAGCCAGTTGTGTGCATTCTTTCACTTTGCTCCGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD180777             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGCCCCTNTACGTGATTCTGGTTCCAATAATTCTGCTAATAACCTTGGCAACGGCATACAATGATTTCTGTCTTTAAACATAGTGAGAACACACTTTCATGTTGCTGGCTGTGTAAGTAATTTAAAAGCTGTTTTTGAGCCGACATGACATGGTCATGTTTTGTGTATCAATCCAATTACTAGTTAATTTATCCTAAATTGCACTGATAAAAACACTTATACGAATTGCAGGCTCAAACTATTATTCAGGGAGGGGACTGTTAATAAATGCTCCGTGTCCCTTCGCTCTAACAACTTTGTGATTCGTTAAACCTTAACGTCGCATTTATGTTAATTTTGATTCCTGAATTTTCAAGCCAGTTGTGTGCATTCTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD080075             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTGAGAACACACTTTCATGTTGCTGGCTGTGTAAGTAATTTAAAAGCTGTTTTTGAGCTGACATGACATGGTCATGTTTTCTGTATCAATCCAATTACTAGTTAATTTATCCTAAATTGCACTGATAAAAACACTTATACGAATTGCAGGCTCAAACTATTATTCAGGGAGGGGACTGTTAATAAATGCTCCGTGTCCCTTCGCTCTAACAACTTTGTGATTCGTTAAACCTTAACGTCGCATTTATGTTAATTTTGATTCCTGAATTTTCAAGCCAGTTGTGTGCATTCTTTCACTTTGCTCCGGTGGTCGTTCGCTCTGTTTGGTTGCTGCGCACATTATTTTGATACATTTTGTAGTAACCCCTCCCTGCTTGACAGTGCTTACACATCAAATGAGTTCATAATTCCCGAGGATATCCAAATTATTTTTCCCCGTTGTCTTTATTTCCTGTTTATTACGGTTTTCGGAACAACTTCACAACTTCATCAGATCTTACGAAATTCACTGGTAACGAATGATTTGTTTACTTTTAGATTCAAATTTGTTTTCTTATTTAAATGTATAAGCTAATCTTTTGTGGCTCATATTTTTCTTTTCTTCAGCTTGTTCTATCAAATCAGGTTGAAGTGTGTTAAATATTTATCACTGTACACATATATGTCAGAGTTTTAGAAACTGGTTTGGTTGCGCCTNCATTTGTTCAATATCCCCAG AATAGTTTAACATTGCCTTT CCCCCAAAACATCTTTATTCGAACTTCGGGGT ATATAGACTTGTGTTG ATATAGCCGAAGAAATTATCTCCTAATACCCTTCTTATTGCCTAGCTTTGACTGCGACCATACTTGTGCATTAACATTTTCTTCATCAATTCCTCCATATAAAAAAATACTTGCTATGTAATGCTTAAATCCGCCGTGGCTTTCTGATTTCCCAACTAAATTTTCATTCTTTTACCTAAACGCTCTATGGACCAAAATCTTACTGTTGAAAATTTTTTTTAAGTTATGCTTTGCTTTAAAGAAAGATGATTGCTG]
[-] EMBL CD152515             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGGGGACTGTTAATAAATGCTCCGTGTCCCTTCGCTCTAACAACTTTGTGATTCGTTAAACCTTAACGTCACATTTATGTTAATTTTGATTCCTGAATTTTCAAGCCAGTTGTGTGCATTCTTTCACTTTGCTCCGGTGGTCGTTCGCTCTGTTTGGTTGCTGCGCACATTATTTTGATACATTTTGTAGTAACCCCTCCCTGCTTGACAGTGCTTACACATCAAATGAGTTCATAATTCCCGAGGATATCCAAATTATTTTTCCCCGTTGTCTTTATTTCCTGGTTATTACGGTTTTCGGAACAACTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD155861             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CAGGTTGAAGTGTGTTAAATATTTATCACTGTACACATATATGTCAGAGTTTTAG AACTGGTTTGGTTGCGCCTCCATTTGTTCAATATCCCAAGAAATAGTTTAACATTGCCTTTCCCCCCAAAACATCTTTATTCGAACTTCGGGGTAATATAGACTTGTGTTGTATATAGCCGA                                                                                                                                                                                                                                                     ]




>consensus_10579#0
CTACGAATCATCACCAACCTTTGATTACTGGATGTACTGCACAACCAATCCAAACTGTCC
CAAACACTACGACTCTGCGTTTCCGAGCAGTTCCAGGTACTGCGACATTAGTGCAGTCAC
AACCACAACAAGTACAGCATTTCTATAATACGACTCAACTTGGTCCAGATTCTGCGTTCA
GTGGCAATGATTCTGGATCTAACATGTTTGTTTCAGCTACTGGTCCCAGTATATTGTCTG
TAGGAAATCAGCAGTCGCAAGTTCTTAGTGCCGTTCCTCAGCGCTTAACTCCAGCTTCAA
GTTCAAGTATTGGTCGTCAGTCCTCTACACCACAAGCAGCTATTGTGCACTTTAGATCAC
AGCAACACCAACCCTTGAGTGGTACAGTAAATCCTATGCAGCCTCATATAATACTTACTA
ATACAACCGCTCCTGCAAGTGGCCCAACCCACCCTCTCCCACCAGTCCCAACCACAGCTT
GTTTCTGCCACTTCCAATGGTCGTCAAGTTGTTGCTTTAATGACCCACCAAAATATTCCT
CATACAAATGTATCTGATCCAGGAGCCCCTTTACGTGATTCTGGTTCCAATAATTCTGCT
AATAACCTTGGCAACGGCATACAATGATTTCTGTCTTTAAACATAGTGAGAACACACTTT
CATGTTGCTGGCTGTGTAAGTAATTTAAAAGCTGTTTTTGAGCTGACATGACATGGTCAT
GTTTTCTGTATCAATCCAATTACTAGTTAATTTATCCTAAATTGCACTGATAAAAACACT
TATACGAATTGCAGGCTCAAACTATTATTCAGGGAGGGGACTGTTAATAAATGCTCCGTG
TCCCTTCGCTCTAACAACTTTGTGATTCGTTAAACCTTAACGTCGCATTTATGTTAATTT
TGATTCCTGAATTTTCAAGCCAGTTGTGTGCATTCTTTCACTTTGCTCCGGTGGTCGTTC
GCTCTGTTTGGTTGCTGCGCACATTATTTTGATACATTTTGTAGTAACCCCTCCCTGCTT
GACAGTGCTTACACATCAAATGAGTTCATAATTCCCGAGGATATCCAAATTATTTTTCCC
CGTTGTCTTTATTTCCTGTTTATTACGGTTTTCGGAACAACTTCACAACTTCATCAGATC
TTACGAAATTCACTGGTAACGAATGATTTGTTTACTTTTAGATTCAAATTTGTTTTCTTA
TTTAAATGTATAAGCTAATCTTTTGTGGCTCATATTTTTCTTTTCTTCAGCTTGTTCTAT
CAAATCAGGTTGAAGTGTGTTAAATATTTATCACTGTACACATATATGTCAGAGTTTTAG
AAACTGGTTTGGTTGCGCCTNCATTTGTTCAATATCCCCAGAATAGTTTAACATTGCCTT
TCCCCCAAAACATCTTTATTCGAACTTCGGGGTATATAGACTTGTGTTGATATAGCCGAA
GAAATTATCTCCTAATACCCTTCTTATTGCCTAGCTTTGACTGCGACCATACTTGTGCAT
TAACATTTTCTTCATCAATTCCTCCATATAAAAAAATACTTGCTATGTAATGCTTAAATC
CGCCGTGGCTTTCTGATTTCCCAACTAAATTTTCATTCTTTTACCTAAACGCTCTATGGA
CCAAAATCTTACTGTTGAAAATTTTTTTTAAGTTATGCTTTGCTTTAAAGAAAGATGATT
GCTG

consensusID : consensus_10579#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 629
fasta sequence

                              [GCGGTGCTTCATCAGAACCCGGAACTCGCATACTCAGTACACAGGATTAAGTGGACACAAAACATAAACAACCTTTTCACACCTAGCTCTCCAAAGTTCGTCGTTAGGGCAGCGACATCTGTAGGTTCCACTCCTAGTGAAATGCATCGACTTGTCCAGAGGATTTGTATGCAGACAACAATCTCTAGATATCATCACCGGCCTAGAGAACAGGAAGGGTGCACAAACTATCCTAAGTGTCGCTAACAGAACGAGTGAGCGTTTCGCAGCAGTTCCAGGTCCTGAGACATTAGTGCAGTCACAACCACAATAAGTGCAGCATTTATATAACACGAAGCAACTTGGTCCAGATTATGAGTTCAGTGGCAATGAATGAGAATCAAACATGTAGGAATCAGCTACTGGTCACAGTATATTGTGGATAGGAAATCAGCAGTCGCAAGTTGGTAGTACGGTTCATCAGCGCTTAAATCCAGCTTCAAGTTCAAGTATTGGTCGTCAGTCCTATACACCACAAGCAGATACTGTGCACTAATAGATCACAGCAACACCAACCCTTGAGTGGTACAGTAAATCATAAGCAGCCTCACATAATAATAAGTAATACAGCCGCTCCTGCAAGTGGCACA]

[-] EMBL CD114171             [GCGGTGCTTCATCAGAACCCGGAACTCGCATACTCAGTACACAGGATTAAGTGGACACAAAACATAAACAACCTTTTCACACCTAGCTCTCCAAAGTTCGTCGTTAGGGCAGCGACATCTGTAGGTTCCACTCCTAGTGAAATGCATCGACTTGTCCAGAGGATTTGTATGCAGACAACAATCTCTAGATATCATCACCGGCCTAGAGAACAGGAAGGGTGCACAAACTATCCTAAGTGTCGCTAACAGAACGAGTGAGCGTTTCGCAGCAGTTCCAGGTCCTGAGACATTAGTGCAGTCACAACCACAATAAGTGCAGCATTTATATAACACGAAGCAACTTGGTCCAGATTATGAGTTCAGTGGCAATGAATGAGAATCAAACATGTAGGAATCAGCTACTGGTCACAGTATATTGTGGATAGGAAATCAGCAGTCGCAAGTTGGTAGTACGGTTCATCAGCGCTTAAATCCAGCTTCAAGTTCAAGTATTGGTCGTCAGTCCTATACACCACAAGCAGATACTGTGCACTAATAGATCACAGCAACACCAACCCTTGAGTGGTACAGTAAATCATAAGCAGCCTCACATAATAATAAGTAATACAGCCGCTCCTGCAAGTGGCACA]




>consensus_10579#1
GCGGTGCTTCATCAGAACCCGGAACTCGCATACTCAGTACACAGGATTAAGTGGACACAA
AACATAAACAACCTTTTCACACCTAGCTCTCCAAAGTTCGTCGTTAGGGCAGCGACATCT
GTAGGTTCCACTCCTAGTGAAATGCATCGACTTGTCCAGAGGATTTGTATGCAGACAACA
ATCTCTAGATATCATCACCGGCCTAGAGAACAGGAAGGGTGCACAAACTATCCTAAGTGT
CGCTAACAGAACGAGTGAGCGTTTCGCAGCAGTTCCAGGTCCTGAGACATTAGTGCAGTC
ACAACCACAATAAGTGCAGCATTTATATAACACGAAGCAACTTGGTCCAGATTATGAGTT
CAGTGGCAATGAATGAGAATCAAACATGTAGGAATCAGCTACTGGTCACAGTATATTGTG
GATAGGAAATCAGCAGTCGCAAGTTGGTAGTACGGTTCATCAGCGCTTAAATCCAGCTTC
AAGTTCAAGTATTGGTCGTCAGTCCTATACACCACAAGCAGATACTGTGCACTAATAGAT
CACAGCAACACCAACCCTTGAGTGGTACAGTAAATCATAAGCAGCCTCACATAATAATAA
GTAATACAGCCGCTCCTGCAAGTGGCACA

consensusID : consensus_10579#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 431
fasta sequence

                              [TTGCGCCTCCATTTGTTCAATATCCCAAGAAATAGTTTAACATTGCCTTTCCCCCCAAAACATCTTTATTCGAACTTCGGGGTAATATAGACTTGTGTTGTATATAGCCGAAGAAATTAATCTCCTAAATACCCTTCTTTATTGCCTAGCTTTGTACATGCGACACATACTTTGTGCAGTTAACATTTTTCTTTCTATCAAATTTCCTTCCATTATAGTATAGTATAACTTTGCTTATGTATATGCTTTTAAAATCCGGTCTGTTGTCTTTTCAATGATGTATCCCCAACACTTATTATCTTCGATTTGTCTTTGTACGCATGAAATGCGCCTGCTTATAGGTCACCCACAAAATTACTTTACTCTGTCTTTGTAAATTATTTTCTCTTTTTATTAAGAGTTCTATTGTCTATTATGTCTTTTTATGAAAT]

[+] EMBL AW017281             [TTGCGCCTCCATTTGTTCAATATCCCAAGAAATAGTTTAACATTGCCTTTCCCCCCAAAACATCTTTATTCGAACTTCGGGGTAATATAGACTTGTGTTGTATATAGCCGAAGAAATTAATCTCCTAAATACCCTTCTTTATTGCCTAGCTTTGTACATGCGACACATACTTTGTGCAGTTAACATTTTTCTTTCTATCAAATTTCCTTCCATTATAGTATAGTATAACTTTGCTTATGTATATGCTTTTAAAATCCGGTCTGTTGTCTTTTCAATGATGTATCCCCAACACTTATTATCTTCGATTTGTCTTTGTACGCATGAAATGCGCCTGCTTATAGGTCACCCACAAAATTACTTTACTCTGTCTTTGTAAATTATTTTCTCTTTTTATTAAGAGTTCTATTGTCTATTATGTCTTTTTATGAAAT]
[-] EMBL CD069222             [                    TATCCCAAGAAATAGTTTAACATTGCCTTTCCCCCCAAAACATCTTTATTCGAACTTCGGGGTAATATAGACTTGTGTTGTATATAGCCGAAGAAATTAATCTCCTAAATACCCTTCTTTATTGCCTAGCTTTGTACATGCGACACATACTTTGTGCAGTTAACATTTTTCTTTCTATCAAATTTCCTTCCATTATAGTATAGTATAACTTTGCTTATGTATATGCTTTTAAAATCCGGTCTGTTGTCTTTTCACTGATGTATCCCCAACACTTATTATCTTCGATTCGTCTTTGTACGCATGAAATGCGCCTGCTTATAGGCCAgcac                                                                                  ]
[+] EMBL CD191964             [                                                            CATCTTTATTCGAACTTCGGGGTAATATAGACTTGTGTTGTATATAGCCGAAGAAATTAATCTCCTAAATACCCTTCTTTATTGCCTAGCTTTGTACATGCGACACATACTTTGTGCAGTTAACATTTTTCTTTCTATCAAATTTCCTTCCATTATAGTATAGTATAACTTTGCTTATGTATATGCTTTTAAAATCCGGTCTGTTG                                                                                                                                                                     ]
[+] EMBL CD192345             [                                                            CATCTTTATTCGAACTTCGGGGTAATATAGACTTGTGTTGTATATAGCCGAAGAAATTAATCTCCTAAATACCCTTCTTTATTGCCTAGCTTTGTACATGCGACACATACTTTGTGCAGTTAACATTTTTCTTTCTATCAAATTTCCTTCCATTATAGTATAGTATAACTTTGCTTATGTATATGCTTTTAAAATCCGGTCTGTTG                                                                                                                                                                     ]
[+] EMBL CD192359             [                                                             ATCTTTATTCGAACTTCGGGGTAATATAGACTTGTGTTGTATATAGCCGAAGAAATTAATCTCCTAAATACCCTTCTTTATTGCCTAGCTTTGTACATGCGACACATACTTTGTGCAGTTAACATTTTTCTTTCTATCAAATTTCCTTCCATTATAGTATAGTATAACTTTGCTTATGTATATGCTTTTAAAATCCGGTCTGTTG                                                                                                                                                                     ]




>consensus_10579#2
TTGCGCCTCCATTTGTTCAATATCCCAAGAAATAGTTTAACATTGCCTTTCCCCCCAAAA
CATCTTTATTCGAACTTCGGGGTAATATAGACTTGTGTTGTATATAGCCGAAGAAATTAA
TCTCCTAAATACCCTTCTTTATTGCCTAGCTTTGTACATGCGACACATACTTTGTGCAGT
TAACATTTTTCTTTCTATCAAATTTCCTTCCATTATAGTATAGTATAACTTTGCTTATGT
ATATGCTTTTAAAATCCGGTCTGTTGTCTTTTCAATGATGTATCCCCAACACTTATTATC
TTCGATTTGTCTTTGTACGCATGAAATGCGCCTGCTTATAGGTCACCCACAAAATTACTT
TACTCTGTCTTTGTAAATTATTTTCTCTTTTTATTAAGAGTTCTATTGTCTATTATGTCT
TTTTATGAAAT

consensusID : consensus_10579#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 322
fasta sequence

                              [TGGTCCCAGTATATTGTCTGTAGGAAATCAGCAGTCGCAAGTTCTTAGTGCCGTTCCTCAGCGCTTAACTCCAGCTTCAAGTTCAAGTATTGGTCGTCAGTCCTCTACACCACAAGCAGCTATTGTGCACTTTAGATCACAGCAACACCAACCCTTGAGTGGTACAGTAAATCCTATGCAGCCTCATATAATACTTACTAATACAACCGCTCCTGCAAGTGGCCCAACCCACCTCTCCCACCAGTCCCAACCACAGCTTGTTTCTGCCACTTCCAATGGTCGTCAAGTTGTTGCTTTAATGACCCCCCATCCATCACAATAC]

[-] EMBL BG930787             [TGGTCCCAGTATATTGTCTGTAGGAAATCAGCAGTCGCAAGTTCTTAGTGCCGTTCCTCAGCGCTTAACTCCAGCTTCAAGTTCAAGTATTGGTCGTCAGTCCTCTACACCACAAGCAGCTATTGTGCACTTTAGATCACAGCAACACCAACCCTTGAGTGGTACAGTAAATCCTATGCAGCCTCATATAATACTTACTAATACAACCGCTCCTGCAAGTGGCCCAACCCACCTCTCCCACCAGTCCCAACCACAGCTTGTTTCTGCCACTTCCAATGGTCGTCAAGTTGTTGCTTTAATGACCCCCCATCCATCACAATAC]




>consensus_10579#3
TGGTCCCAGTATATTGTCTGTAGGAAATCAGCAGTCGCAAGTTCTTAGTGCCGTTCCTCA
GCGCTTAACTCCAGCTTCAAGTTCAAGTATTGGTCGTCAGTCCTCTACACCACAAGCAGC
TATTGTGCACTTTAGATCACAGCAACACCAACCCTTGAGTGGTACAGTAAATCCTATGCA
GCCTCATATAATACTTACTAATACAACCGCTCCTGCAAGTGGCCCAACCCACCTCTCCCA
CCAGTCCCAACCACAGCTTGTTTCTGCCACTTCCAATGGTCGTCAAGTTGTTGCTTTAAT
GACCCCCCATCCATCACAATAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10579#1      GCGGTGCTTCATCAGAACCCGGAACTCGCATACTCAGTACACAGGATTAAGTGGACACAA 60
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      ------------------------------------------------------------
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      AACATAAACAACCTTTTCACACCTAGCTCTCCAAAGTTCGTCGTTAGGGCAGCGACATCT 120
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      ------------------------------------------------------------
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      GTAGGTTCCACTCCTAGTGAAATGCATCGACTTGTCCAGAGGATTTGTATGCAGACAACA 180
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      ------------------------------------------------------------
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ATCTCTAGATATCATCACCGGCCTA-GAGAACAGGAAGGG-TGCACAAACTATCCTAAGT 238
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      ----CTACGAATCATCACCAACCTTTGATTACTGGATGTACTGCACAACCAATCCAAACT 56
consensus_10579#2      ---------TTGCGCCTCCATTTGTTCAATATCCCAAGAAATAGTTTAACATTGCCTTTC 51
                                                                                   

consensus_10579#1      GTCGCTAACAGAACGAGTGAGCGTTTCGCAGCAGTTCCAGGTCCTGAGACATTAGTGCAG 298
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      GTCCCAAACACTACGACTCTGCGTTTCCGAGCAGTTCCAGGTACTGCGACATTAGTGCAG 116
consensus_10579#2      CCCCCAAAACATCTTTATTCGAACTTCGGGGTAATATAGACTTGTGTTGTAT-ATAGCCG 110
                                                                                   

consensus_10579#1      TCACAACCACAATAAGTGCAGCATTTATATAACACGAAGCAACTTGGTCCAGATTATGAG 358
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      TCACAACCACAACAAGTACAGCATTTCTATAATACGACTCAACTTGGTCCAGATTCTGCG 176
consensus_10579#2      AAGAAATTAATCTCCTAAATACCCTTCTTTATTGC---CTAGCTTTGTACATGCGACACA 167
                                                                                   

consensus_10579#1      TTCAGTGGCAATGAATGAGAATCAAACATGTAGGAATCAGCTACTGGTCACAGTATATTG 418
consensus_10579#3      --------------------------------------------TGGTCCCAGTATATTG 16
consensus_10579#0      TTCAGTGGCAATGATTCTGGATCTAACATGTTTGTTTCAGCTACTGGTCCCAGTATATTG 236
consensus_10579#2      TACTTTG--TGCAGTTAACATTTTTCTTTCTATCAAATTTCCTTCCATTATAGTATAGTA 225
                                                                      *   ****** * 

consensus_10579#1      TGGATAGGAAATCAGCAGTCGCAAGTTGGTAGTACGGTTCATCAGCGCTTAAATCCAGCT 478
consensus_10579#3      TCTGTAGGAAATCAGCAGTCGCAAGTTCTTAGTGCCGTTCCTCAGCGCTTAACTCCAGCT 76
consensus_10579#0      TCTGTAGGAAATCAGCAGTCGCAAGTTCTTAGTGCCGTTCCTCAGCGCTTAACTCCAGCT 296
consensus_10579#2      TAACTTTG---CTTATGTATATGCTTTTAAAATCCGGTCTGTTGTCTTTTCAATGATGTA 282
                       *   *  *                 **   * * * **   *   *  ** * *   *  

consensus_10579#1      TCAAGTTCAAGTATTGGTCGTCAGTCCTATACACCACAAGCAGATACTGTGCACTAATAG 538
consensus_10579#3      TCAAGTTCAAGTATTGGTCGTCAGTCCTCTACACCACAAGCAGCTATTGTGCACTT-TAG 135
consensus_10579#0      TCAAGTTCAAGTATTGGTCGTCAGTCCTCTACACCACAAGCAGCTATTGTGCACTT-TAG 355
consensus_10579#2      TCCCCAACACTTATTA-TCTTCGATTTGTCTTTGTACGCATGAAATGCGCCTGCTTATAG 341
                       **     **  ****  ** **  *          **           *    **  ***

consensus_10579#1      ATCACAGCAACACCAACCCTTGAGTGGTACAGTAAATCATAAGCAGCCTCACATAATAAT 598
consensus_10579#3      ATCACAGCAACACCAACCCTTGAGTGGTACAGTAAATCCTATGCAGCCTCATATAATACT 195
consensus_10579#0      ATCACAGCAACACCAACCCTTGAGTGGTACAGTAAATCCTATGCAGCCTCATATAATACT 415
consensus_10579#2      GTCACCCACAAAATTACTTTACTCTGTCTTTGTAAATTATTTTCTCTTTTTATTAAGAGT 401
                        ****    * *   **  *    **     ******  *   *    *    *** * *

consensus_10579#1      AAGTAATACAGCCGCTCCTGCAAGTGGCACA----------------------------- 629
consensus_10579#3      TACTAATACAACCGCTCCTGCAAGTGGCCCAACCCACC-TCTCCCACCAGTCCCAACCAC 254
consensus_10579#0      TACTAATACAACCGCTCCTGCAAGTGGCCCAACCCACCCTCTCCCACCAGTCCCAACCAC 475
consensus_10579#2      TCTATTGTCTATTATGTCTTTTTATGAAAT------------------------------ 431
                               *        **     **                                  

consensus_10579#1      ------------------------------------------------------------
consensus_10579#3      AGCTTGTTTCTGCCACTTCCAATGGTCGTCAAGTTGTTGCTTTAATGACCCCCCATCCAT 314
consensus_10579#0      AGCTTGTTTCTGCCACTTCCAATGGTCGTCAAGTTGTTGCTTTAATGACCCACCAAAATA 535
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ------------------------------------------------------------
consensus_10579#3      CACAATAC---------------------------------------------------- 322
consensus_10579#0      TTCCTCATACAAATGTATCTGATCCAGGAGCCCCTTTACGTGATTCTGGTTCCAATAATT 595
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ------------------------------------------------------------
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      CTGCTAATAACCTTGGCAACGGCATACAATGATTTCTGTCTTTAAACATAGTGAGAACAC 655
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ------------------------------------------------------------
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      ACTTTCATGTTGCTGGCTGTGTAAGTAATTTAAAAGCTGTTTTTGAGCTGACATGACATG 715
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ------------------------------------------------------------
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      GTCATGTTTTCTGTATCAATCCAATTACTAGTTAATTTATCCTAAATTGCACTGATAAAA 775
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ------------------------------------------------------------
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      ACACTTATACGAATTGCAGGCTCAAACTATTATTCAGGGAGGGGACTGTTAATAAATGCT 835
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ------------------------------------------------------------
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      CCGTGTCCCTTCGCTCTAACAACTTTGTGATTCGTTAAACCTTAACGTCGCATTTATGTT 895
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ------------------------------------------------------------
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      AATTTTGATTCCTGAATTTTCAAGCCAGTTGTGTGCATTCTTTCACTTTGCTCCGGTGGT 955
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ------------------------------------------------------------
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      CGTTCGCTCTGTTTGGTTGCTGCGCACATTATTTTGATACATTTTGTAGTAACCCCTCCC 1015
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ------------------------------------------------------------
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      TGCTTGACAGTGCTTACACATCAAATGAGTTCATAATTCCCGAGGATATCCAAATTATTT 1075
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ------------------------------------------------------------
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      TTCCCCGTTGTCTTTATTTCCTGTTTATTACGGTTTTCGGAACAACTTCACAACTTCATC 1135
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ------------------------------------------------------------
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      AGATCTTACGAAATTCACTGGTAACGAATGATTTGTTTACTTTTAGATTCAAATTTGTTT 1195
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ------------------------------------------------------------
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      TCTTATTTAAATGTATAAGCTAATCTTTTGTGGCTCATATTTTTCTTTTCTTCAGCTTGT 1255
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ------------------------------------------------------------
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      TCTATCAAATCAGGTTGAAGTGTGTTAAATATTTATCACTGTACACATATATGTCAGAGT 1315
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ------------------------------------------------------------
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      TTTAGAAACTGGTTTGGTTGCGCCTNCATTTGTTCAATATCCCCAGAATAGTTTAACATT 1375
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ------------------------------------------------------------
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      GCCTTTCCCCCAAAACATCTTTATTCGAACTTCGGGGTATATAGACTTGTGTTGATATAG 1435
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ------------------------------------------------------------
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      CCGAAGAAATTATCTCCTAATACCCTTCTTATTGCCTAGCTTTGACTGCGACCATACTTG 1495
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ------------------------------------------------------------
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      TGCATTAACATTTTCTTCATCAATTCCTCCATATAAAAAAATACTTGCTATGTAATGCTT 1555
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ------------------------------------------------------------
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      AAATCCGCCGTGGCTTTCTGATTTCCCAACTAAATTTTCATTCTTTTACCTAAACGCTCT 1615
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ------------------------------------------------------------
consensus_10579#3      ------------------------------------------------------------
consensus_10579#0      ATGGACCAAAATCTTACTGTTGAAAATTTTTTTTAAGTTATGCTTTGCTTTAAAGAAAGA 1675
consensus_10579#2      ------------------------------------------------------------
                                                                                   

consensus_10579#1      ---------
consensus_10579#3      ---------
consensus_10579#0      TGATTGCTG 1684
consensus_10579#2      ---------