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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10596#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1053 fasta sequence
[ATTCGGCACGCAGAAAACATTGATTGCTGCATGAAGCACCTGTGGCTTAGAGAAAACGTATTGTAACGCCTGCAAGAAATCCTTCGCAAATAACAAATCTTTTACTGCCCATCTGATTTCGAAGCGCCATATACATAACAGCCACTTGTTCAAGACGAAAACTGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGACCCCGTCCAAGTAGCATTACTGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGTTACCATCTGGTACTGTTCTAGGTCACCGGAAGATGAGAACAATTTATAAGCAACACTTGGCTGCTACAGACAAAGCTAAATTATCGAACCGTGATAATGGACAGAAGAGCGTTTGTGTACGACGTCCAGACTTCAAAGCCTTAATGCAGTATAGGTCTAACGCTGACTCGGAGAGATATTTAAACGAACAAAGAAAGTATTGGGACTTAGTAACTGGTGTTCAAGGTAATTTCCACAATCGCCTTCATCTTCGTCGACAGTACTAGATATTTGAGGATTTAATATAATTTTAAAAAAT-CCATTT]
[+] EMBL CD081167 [ATTCGGCACGCAGAAAACATTGATTGCTGCATGAAGCACCTGTGGCTTAGAGAAAACGTATTGTAACGCCTGCAAGAAATCCTTCGCAAATAACAAATCTTTTACTGCCCATCTGATTTCGAAGCGCCATATACATAACAGCCACTTGTTCAAGACGAAAACTGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGACCCCGTCCAAGTAGCATTACTGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGTTACCATCTGGTACTGTTCTAGGTCACCGGAAGATGAGAACAATTTATAAGCAACACTTGGCTGCTACAGACAAAGCTAAATTATCGAACCGTGATAATGGACAGAAGAGCGTTTGTGTACGACGTCCAGACTTAAAAGCC TAATGCAGTATANGTCTAACGCTGACTNCGAGAGATATTTAAACGAACCAAGAAAGTATTGGGACTTAGTAACTGGTGTTCAAGGTAATTTCCAC ATCGCCTTCATCTTCGTCGAC GTACTAGATATTTGAGGGATTAATAT ANTNTAAAAAAT CCAT ]
[-] EMBL CD074987 [ GACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGACCCCGTCCAAGTAGCATTACTGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGTTACCATCTGGTACTGTTCTAGGTCACCGGAAGATGAGAACAATTTATAAGCAACACTTGGCTGCTACAGACAAAGCTAAATTATCGAACCGTGATAATGGACAGAAGAGCGTTTGTGTACGACGTCCAGACTTCAAAGCCTTAATGCAGTATAGGTCTAACGCTGACTCGGAGAGATATTTAAACGAACAAAGAAAGTATTGGGACTTAGTAACTGGTGTTCAAGGTAATTTCCACAATCGCCTTCATCTGAGTCGACAGTACTAGATATTTGAGGATTTAATATAATTTTAAAAGATACCATTT]
[-] EMBL CD074019 [ TTTAGTG TCCATTCCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGACCCCGTCCAAGTAGCATTACTGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGTTACCATCTGGTACTGTTCTAGGTCACCGGAAGATGAGAACAATTTATAAGCAACACTTGGCTGCTACAGACAAAGCTAAATTATCGAACCGTGATAATGGACAGAAGAGCGTTTGTGTACGACGTCCAGACTTCAAAGCCTTAATGCAGTATAGGTCTAACGCTGACTCGGAGAGATATTTAAACGAACAAAGAAAGTATTGGGACTTAGTAACTGGTGTTCAAGGTAATTTCCACAATCGCCTTCATCTTCGTCGACAGTACTAGATATTTGAGGATTTAATATAATTTTAAAAAAT CCATTT]
[-] EMBL CD074759 [ TGGAAGGATCAGACAATACTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGACCCCGTCCAAGTAGCATTACTGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGTTACCATCTGGTACTGTTTTAGGTCCCCGGAAGATGAGAACAATTTATAAGCAACACTTGGCTGCTACAGACAAAGCTAAATTATCGAACCGTGATAATGGACAGAAGAGCGTTTGTGTACGACGTCCAGACTTCAAAGCCTTAATGCAGTATAGGTCTAACGCTGACTCGGAGAGATATTTAAACGAACAAAGAAAGTATTGGGACTTAGTAACTGGTGTTCAAGGTAATTTCCACAATCGCCTTCATCTTCGTCGACAGTACTAGATATTTGAGGATTTAATATAATTTTAAAAAAT CCATTT]
[+] EMBL CD188589 [ TGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATAGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGTTACCATCTGGTACTGTTCTAGGTCACCGGAAGATGAGAACAATTTATAAGCAACACTTGGCTGCTACAGACAAAGCTAAATTATCGAACCGTGATAATGGACAGAAGAGCGTTTGTGT ]
[-] EMBL CD189870 [ GGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGTTACCATCTGGTACTGTTCTAGGTCATCGGAAGATGAGAACAATTTATAAGCAACACTTGGCTGCTACAGACAAAGCTAAATTATCGGACCGTGATAATGGACAGAAGAGCGTTTGTGTACGACGTCCAGACTTCAAA ]
[-] EMBL CD188812 [ GGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGTTACCATCTGGTACTGTTCTAGGTCACCGGAAGATGAGAACAATTTATAAGCAACACTTGGCTGCTACAGACAAAGCTAAATTATCGAACCGTGATAATGGACAGAAGAGCGTTTGT ]
consensusID : consensus_10596#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 648 fasta sequence
[CTCCAGGCCAAAATTCGGCACGAGGGTCAAGGCCAGGCACTGTTACGGATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGGAAAACTGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGAACCCCGTCCAAGTAGCATTACTGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTT]
[+] EMBL CD079759 [CTCCAGGCCAAAATTCGGCACGAGGGTCAAGGCCAGGCACTGTTACGGATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGGAAAACTGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGAACCCCGTCCAAGTAGCATTACTGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTT]
[-] EMBL CD181069 [ AAGGCCAGGCACTGTTACGGATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGGAAAACGGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACTTGGCCAAACGTGTCNTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTATTTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAG ACCCCGTCCAAGTAGCATTACTGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAG ]
[-] EMBL CD094865 [ ATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGGAAAACCGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTCTTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTA ]
[-] EMBL CD095174 [ ATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGGAAAACTGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACGTATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTA ]
consensusID : consensus_10596#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 637 fasta sequence
[CGGATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGCTCTCACATCGCACGCTCCATCGCTACTAGAGCTACCTTCAAATAAGACGCAACCCACCAAAGGCATGACGTACTTATGTTCTTCCTGTAAGGCTGATGTGCCTATCTCAGAAAGAATCAACCATGTCAGGAGCGATTGGCATATATACAACCTAAAACGTGTCGTTTCTGATCTACTACCGATATCTGAAGACATGTTTGTACATAAAAAACAATTGATTGCTGCAGAAGCACCTGTGGCTATAGAGAAAACGTATTGTAACGCCTGCAAGAAATCCTTCGCAAATAACAAATCTTTTACTGCCCATCTGATTTCGAAGCGCCATATACATAACAGCCACTTGTTCAAGACGAAAACTGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGGTTGTTA]
[+] EMBL CD061133 [CGGATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGCTCTCACATCGCACGCTCCATCGCTACTAGAGCTACCTTCAAATAAGACGCAACCCACCAAAGGCATGACGTACTTATGTTCTTCCTGTAAGGCTGATGTGCCTATCTCAGAAAGAATCAACCATGTCAGGAGCGATTGGCATATATACAACCTAAAACGTGTCGTTTCTGATCTACTACCGATATCTGAAGACATGTTTGTACATAAAAAACAATTGATTGCTGCAGAAGCACCTGTGGCTACGGAGAAAACGTATTGT ]
[-] EMBL CD189645 [ ATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGCTCTCACATCGCACGCTCCATCGCTACTAGAGCTACCTTCAAATAAGACGCAACCCACCAAAGGCATGACGTACTTATGTTCTTCCTGTAAGGCTGATGTGCCTATCTCAGAAAGAATCAACCATGTCAGGAGCGATTGGCATATATACAACCTAAAACGTGTCGTTTCTGATCTACTACCGATATCTGAAGACATGTTTGTACATAAAAAACAATTGATTGCTGCAGAAGCACCTGTGGCTATAGAGAAAACGTATTGTAACGCCTGCAAGAAATCCTTCGCAAATAACAAATCTTTTACTGCCCATCTGATTTCGAAGCGCCATATACATAACAGCCACTTGTTCAAGACGAAAACTGCTCAAACAGTCATCAGTTCTA ]
[+] EMBL BF936410 [ ATCACGTTAGCAGACGTGGTTTTGGTTGCTCTCACATCGCACGCTCCATCGCTACTAGAGCTACCTTCAAATAAGACGCAACCCACCAAAGGCATGACGTACTTATGTTCTTCCTGTAAGGCTGATGTGCCTATCTCAGAAAGAATCAACCATGTCAGGAGCGATTGGCATATATACAACCTAAAACGTGTCGTTTCTGATCTACTACCGATATCTGAAGACATGTTTGTACATAAAAAACAATTGATTGCTGCAGAAGCACCTGTGGCTATAGAGAAAACGTATTGTAACGCCTGCAAGAAATCCTTCGCAAATAACAAATCTTTTACTGCCCATCTGATTTCGAAGCGCCATATACATAACAGCCACTTGTTCAAGACGAAAACTGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGGTTGTTA]
[-] EMBL CD095006 [ ATAACAAATCTTTTACTGCCCATCTGATTTCGAAGCGCCATATACATAACAGCCACTTGTTCAAGACGAAAACTGCCCAAACAGTCATCAGTTC ]
consensusID : consensus_10596#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 618 fasta sequence
[GTCAAGGTCAAGGCCAGGCACTGTTACGGATTGGGAATATCAAAAACTGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCNNNNNNNNNNNACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCNNNNNNNNTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGACCCCGTCCAAGTAGCATTACTGGTAGTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGNTACCATCTGGTAC]
[+] EMBL CD080925 [GTCAAGGTCAAGGCCAGGCACTGTTACGGATTGGGAATATCAAAAACTGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCNNNNNNNNNNNACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCNNNNNNNNTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGACCCCGTCCAAGTAGCATTACTGGTAGTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGNTACCATCTGGTAC]
consensusID : consensus_10596#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 388 fasta sequence
[GGCACTGTTACGGATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGGAGTATCAAGTGTGCTCTATGGATTCAAAATTAAGGGTTCAATAAAGGAGGGTAATCATTGAACAACATCGATCGTTATTGTCAGGATGTTTTTTGTACATATCTGATCACCATTAATCCATATATATAAGGCCTCTGATATACTCATTCCTGTTGTCTTCAGGAAAACTGCTCAAACAGTCATCAGTTCTACTGAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCGCTTGATAGTGCCAAACAAAGCGAC-TGCTTGCCATAAGCAAGGGGA]
[-] EMBL CD061186 [GGCACTGTTACGGATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGGAGTATCAAGTGTGCTCTATGGATTCAAAATTAAGGGTTCAATAAAGGAGGGTAATCATTGAACAACATCGATCGTTATTGTCAGGATGTTTTTTGTACATATCTGATCACCATTAATCCATATATATAAGGCCTCTGATATACTCATTCCTGTTGTCTTCAGGAAAACTGCTCAAACAGTCATCAGTTCTACTGAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCGCTTGATAGTGCCAAACAAAGCGAC TGCTTGCCATAAGCAAGGGGA]
[-] EMBL CD061190 [GGCACTGTTACGGATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGGAGTATCAAGTGTGCTCTATGGATTCAAAATTAAGGGTTCAATAAAGGAGGGTAATCATTGAACAACATCGATCGTTATTGTCAGGATGTTTTTTGTACATATCTGATCACCATTAATCCATATATATAAGGCCTCTGATATACTCATTCCTGTTGTCTTCAGGAAAACTGCTCAAACAGTCATCAGTTCTACTGAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCGCTTGATAGTGCCAAACAAAGCGACTTGCTgc ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10596#1 ------------------------------------------------------------
consensus_10596#3 ------------------------------------------------------------
consensus_10596#0 ATTCGGCACGCAGAAAACATTGATTGCTGCATGAAGCACCTGTGGCTTAGAGAAAACGTA 60
consensus_10596#2 ------------------------------------------------------------
consensus_10596#4 ------------------------------------------------------------
consensus_10596#1 ------CTCCAGGCCAAAATTCGGCACGAGGGTCAAGGCCA--GGCACTGTTACGGATTG 52
consensus_10596#3 -------------------------GTCAAGGTCAAGGCCA--GGCACTGTTACGGATTG 33
consensus_10596#0 TTGTAACGCCTGCAAGAAATCCTTCGCAAATAACAAATCTTTTACTGCCCATCTGATTTC 120
consensus_10596#2 -----------------------------------------------------CGGATTG 7
consensus_10596#4 ------------------------------------------------------------
consensus_10596#1 GGAATATCACGT---TAGCAGACGTGGTTTTGGTTGGAAAACTGCTCAAACAGTCATCAG 109
consensus_10596#3 GGAATATCA----------------------------AAAACTGCTCAAACAGTCATCAG 65
consensus_10596#0 GAAGCGCCATATACATAACAGCCACTTGTTCAAGACGAAAACTGCTCAAACAGTCATCAG 180
consensus_10596#2 GGAATATCACGT---TAGCAGACGTGGTTTTGGTT---GCTCTCACATCGCACGCTCCAT 61
consensus_10596#4 ------------------------------------------------------------
consensus_10596#1 TTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTAC-CGCTGGGGTCATGTT 168
consensus_10596#3 TTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTAC-CGCTGGGGTCATGTT 124
consensus_10596#0 TTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTAC-CGCTGGGGTCATGTT 239
consensus_10596#2 CGCTACTAGAGCTACCTTCAAATAAGACGCAACCCACCAAAGGCATGACGTACTTATGTT 121
consensus_10596#4 ------------------------------------------------------------
consensus_10596#1 TGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCAC-TTGATAGTGCC 227
consensus_10596#3 TGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCAC-TTGATAGTGCN 183
consensus_10596#0 TGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCAC-TTGATAGTGCC 298
consensus_10596#2 CTTCCTGTAAG-GCTG-ATGTGCCTATCTCAG--AAAGAATCAACCATGTCAGGAGCGAT 177
consensus_10596#4 -----------------------------------GGCACTGTTACGGATTGGGAATATC 25
* * * * *
consensus_10596#1 AAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGT 287
consensus_10596#3 NNNNNNNNNNACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGT 243
consensus_10596#0 AAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGT 358
consensus_10596#2 TGGCATATATACAACCTAAAACGTGTCGTTTCTGATCTACTACCGATATCTGAAGACATG 237
consensus_10596#4 ACGTTAGCAGACGTGGTTTTGGTTGGAGTATCAAGTGTGCTCTATGGATTCAAAATTAAG 85
** ** * * * ** *
consensus_10596#1 GTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTG-AATTAGGACGTAT 346
consensus_10596#3 GTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTG-AATTAGGACGTAT 302
consensus_10596#0 GTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTG-AATTAGGACGTAT 417
consensus_10596#2 TTTGTACATAAAAAACAATTGATTGCTGCAGAAGCACCTGTGGCTATAGAGAAAACGTAT 297
consensus_10596#4 GGTTCAAT--AAAGGAGGGTAATCATTG-AACAACATCGATCGTTATTGTCAGGATGTTT 142
* * * * * * * * * * ** *
consensus_10596#1 CGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGT--AGCTG-TGT 403
consensus_10596#3 CGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCNNNNNNNNTACGGT--AGCTG-TGT 359
consensus_10596#0 CGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGT--AGCTG-TGT 474
consensus_10596#2 TGTAACGCCTGCAAGAAATC-CTTCGCAAATAA-CAAATCTTTTACTGCCCATCTGATTT 355
consensus_10596#4 TTTGT--------ACATATCTGATCACCATTAATCCATATATATAAGGC--CTCTGATAT 192
* * * * * * * ** * *** * *
consensus_10596#1 GGAAGGATCAGACA----ATACTCGGATCTCCCTATCTG---CTGTCCG--CAGTCATAT 454
consensus_10596#3 GGAAGGATCAGACA----ATACTCGGATCTCCCTATCTG---CTGTCCG--CAGTCATAT 410
consensus_10596#0 GGAAGGATCAGACA----ATACTCGGATCTCCCTATCTG---CTGTCCG--CAGTCATAT 525
consensus_10596#2 CGAAGCGCCATATACATAACAGCCACTTGTTCAAGACGAAAACTGCTCAAACAGTCATCA 415
consensus_10596#4 ACTCATTCCTGTTG-------------TCTTCAGGAAAA---CTGCTCAAACAGTCATCA 236
* * * * *** * *******
consensus_10596#1 GTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGAACCCCGTCCAAGTAG 514
consensus_10596#3 GTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGA-CCCCGTCCAAGTAG 469
consensus_10596#0 GTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGA-CCCCGTCCAAGTAG 584
consensus_10596#2 GTTCTACTAAACCTGCAGGAGAAAACTGT----TTGACAGAACCATTACCGCTGGGGT-- 469
consensus_10596#4 GTTCTACTGAACCTGCAGGAGAAAACTGT----TTGACAGAACCATTACCGCTGGGGT-- 290
*** ** * * ** * * ** * * * ** * * *** **
consensus_10596#1 CATTACTGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTA 574
consensus_10596#3 CATTACTGGTAG-----------------------------TGCGAGATAAATTATCCTA 500
consensus_10596#0 CATTACTGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTA 644
consensus_10596#2 CATGTTTGTTCTGTGACCGCTACATATCACTGGATTAT--TTGCCGAATGAGTCACTTGA 527
consensus_10596#4 CATGTTTGTTCTGTGACCGCTACATATCACTGGATTAT--TTGCCGAATGAGTCGCTTGA 348
*** ** * *** ** * * *
consensus_10596#1 AAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCAC 634
consensus_10596#3 AAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCAC 560
consensus_10596#0 AAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCAC 704
consensus_10596#2 TAG----TGCCAAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGC 583
consensus_10596#4 TAG----TGCCAAACAAAGCGA-CTGCTT-GCCATAAGCAAGGGGA-------------- 388
** * * * ** ** * *
consensus_10596#1 -CATCTTTCATACTT--------------------------------------------- 648
consensus_10596#3 -CATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGNTACCATCTGGTAC- 618
consensus_10596#0 -CATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGTTACCATCTGGTACT 763
consensus_10596#2 ACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGGTTGTTA------ 637
consensus_10596#4 ------------------------------------------------------------
consensus_10596#1 ------------------------------------------------------------
consensus_10596#3 ------------------------------------------------------------
consensus_10596#0 GTTCTAGGTCACCGGAAGATGAGAACAATTTATAAGCAACACTTGGCTGCTACAGACAAA 823
consensus_10596#2 ------------------------------------------------------------
consensus_10596#4 ------------------------------------------------------------
consensus_10596#1 ------------------------------------------------------------
consensus_10596#3 ------------------------------------------------------------
consensus_10596#0 GCTAAATTATCGAACCGTGATAATGGACAGAAGAGCGTTTGTGTACGACGTCCAGACTTC 883
consensus_10596#2 ------------------------------------------------------------
consensus_10596#4 ------------------------------------------------------------
consensus_10596#1 ------------------------------------------------------------
consensus_10596#3 ------------------------------------------------------------
consensus_10596#0 AAAGCCTTAATGCAGTATAGGTCTAACGCTGACTCGGAGAGATATTTAAACGAACAAAGA 943
consensus_10596#2 ------------------------------------------------------------
consensus_10596#4 ------------------------------------------------------------
consensus_10596#1 ------------------------------------------------------------
consensus_10596#3 ------------------------------------------------------------
consensus_10596#0 AAGTATTGGGACTTAGTAACTGGTGTTCAAGGTAATTTCCACAATCGCCTTCATCTTCGT 1003
consensus_10596#2 ------------------------------------------------------------
consensus_10596#4 ------------------------------------------------------------
consensus_10596#1 --------------------------------------------------
consensus_10596#3 --------------------------------------------------
consensus_10596#0 CGACAGTACTAGATATTTGAGGATTTAATATAATTTTAAAAAATCCATTT 1053
consensus_10596#2 --------------------------------------------------
consensus_10596#4 --------------------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||