cluster # 10598

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Schistosoma mansoni
cluster # 10598 cluster # 10598 Sequences # 18 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10598#0 length = 1290 sequences # 9
consensus_10598#1 length = 730 sequences # 2

consensus_10598#2 length = 680 sequences # 2
consensus_10598#3 length = 657 sequences # 5

consensusID : consensus_10598#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1290
fasta sequence

                              [TCGAGCCAGAATTCGCCGAGGAGAGCTCAGAAGATATACTCGATTCTTTTCGAACTGCGATTTCCACATCTGACATAGAAAAGGTTAAATCTCTCCTTTCAGAGGATAGGTCACTAATTAACTCCCATGACAAAGAGGGCTTGTCTCCACTGCAATTGGCTTGTTTCCGGGGTAAACTTCCGATCGTTGAGTTTCTTCTCAAATACGGAGCAAATGTAAATTCTTCTTCCCACAAACAGGGTTATACTGCCCTAATGTTTGCTGCTCTTTCAGGGAATATTGAGGTTGTTGAGCTTCTTCTCCATTATGGGGCTCGGATAAATGATGTTAACAGTATTGGAAAGACTGCTTCTCAAATGGCCGCATTTGTGGGAAATCATAACGTCGTCACTCTTATTAATAACTATCTGGAAAGAGAAGAAATAGCCATTTATGTGTCGAAGTCCCAATTACTACCTGAACATGCATCTGCGATTCACCAACTAGTTTTGCAGTTAAATATTTCACCTATTAAAGTCTTTCTGCTACTGAACAATGAGATCGAAACCTGTAGTCGCTCGGGAGAAAATTACGAGAAGTGTATGTTGACTCA-TTGGCGTTGCATACATACTATTTTTGAAGATCTATGCAACAAATATTTCACACCTCATTTA-A-CACACGAACCATTATCCTTAAAATTTCATTTATTGGCCTGTTGTATACGCCAAGCCGGAGAATATTACGATAAAGAGCCGGAAACTACAGATGTTCAAGATCATGCTTTTTCACCATTAAAGCAACTGATTAGGAAATTCTTAGTCGGTACAGAGCCCTATGGTTTGCCGTTAGGTCAAGAGCAATTCTTACGACAGTCCTTGACTTCGTTCCCCCACCATCAATCGACCTTATGGAGACATATTGTCCAACAAATATCCCCACTACATTTAGGCCATATGCCAACAGCGTTATCCGTTTTTACAAAAACAATCAACGGTACTATCATGTACAATGCTCGTCCTCTTGAACTATGCGCAACATGTGGAGATGGTCCTGAACTAGGAATACCAGGGAAGTTGAAAGCATGTCAGCAATGCAAAATTACTTCCTACTGTTCAGTCTCTTGTCAACGTTTACACTGGTTTACACATAAGAAATTTTGTCCAGTTATTAAAAAACATAAAAAAGAATTTGAATTTGCCAAGTGAAGCATAAATGACATTGCAATTTGTGATACATACACTAACTTTTATTCCACTTTACAACGGATTTGTTGTTCATATTTAATTTAGAATAATTTATTAATAATAAAGT]

[+] EMBL CD081819             [TCGAGCCAGAATTCGCCGAGGAGAGCTCAGAAGATATACTCGATTCTTTTCGAACTGCGATTTCCACATCTGACATAGAAAAGGTTAAATCTCTCCTTTCAGAGGATAGGTCACTAATTAACTCCCATGACAAAGAGGGCTTGTCTCCACTGCAATTGGCTTGTTTCCGGGGTAAACTTCCGATCGTTGAGTTTCTTCTCAAATACGGAGCAAATGTAAATTCTTCTTCCCACAAACAGGGTTATACTGCCCTAATGTTTGCTGCTCTTTCAGGGAATATTGAGGTTGTTGAGCTTCTTCTCCATTATGGGGCTCGGATAAATGATGTTAACAGTATTGGAAAGACTGCTTCTCAAATGGCCGCATTTGTGGGAAATCATAACGTCGTCACTCTTATTAATAACTATCTGGAAAGAGAAGAAATAGCCATTTATGTGTCGAAGTCCCAATTACTACCTGAACATGCATCTGCGATTCACCAACTAGTTTTGCAGTTAAATATTTCACCTATTAAAGTCTTTCTGCTACTGAACAATGAGATCGAAACCTGTAGTCGCTCGGGAGAAAATTACGAGAAGTGTATGTTGACTCA TTGGCGTTGCATACATACTATTTTTGAAGATCTATGCAACANATATTTCACACCTCATTTA A CACACGAACCATTATCCTTANAATTTCATTTATTGGCCTGTTGTATACGCCAAGCCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL BG930607             [                                                                                                                                                                                                                                                                                                                                                                                                                                  AGAAATAGCCATTTATGTGTCGAAGTCCCAATTACTACCTGAACATGCATCTGCGATTCACCAACTAGTTTTGCAGTTAAATATTTCACCTATTAAAGTCTTTCTGCTACTGAACAATGAGATCGAAACCTGTAGTCGCTCGGGAGAAAATTACGAGAAGTGTATGTTGACTCA TTGGCGTTGCATACATACTATTTTTGAAGATCTATGCAACAAATATTTCACACCTCATTTA A CACACGAACCATTATCCTTAAAATTTCATTTATTGGCCTGTTGTATACGCCAAGCCGGAGAATATTACGATAAAGAGCCGGAAACTACAGATGTTCAAGATCATGCTTTTTCACCATTAAAGCAACTGATTAGGAAATTCTTAGTCGGTACAGAc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL BG931461             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCACCAAATAGTTTTGCAGTTAAATATTTCACCTATTAAAGTCTTTCTGCTACTGAACAATGAGATCGAAACCTGTAGTCGCTCGGGAGAAAATTACGAGAAGTGTATGTTGACTCA TTGGCGTTGCATACATACTATTTCTGAAGATCTATGCCACAAATATTTCACACCTCATTTT A CACACGAACCATTATCCTTAAAATTTCATTTATGGGCCTGTTGTATACGCCAAGCCGGAGAATATTACGATTAAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD178643             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTTTCTGCTACTGAACAATGAGATCGAAACCTGTAGTCGCTCGGGAGAAAATTACGAGAAGTGTATGTTGACTCATTTGGCGTTGCATACATACTATTTTTGAAGATCTATGCAACAAATATTTCACACCT ATTTACACCGCACAAACCTTTATCCTTAATATTTCATTTATTGGCCTGTTGTATACGCCAAGCCGGAG ATATTACGATAAAGAGCCGGAAACTACAGATGTTCAAGATCATGCTTTTTCACCATTAAAGCAACTGATTAGGAAATTCTTAGTCGGTACAGAGCCCTATGGTTTGCCGTTAGGTCAAGAGCATTNCTTACGACAGTCCTTGACTTC                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD178555             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTTCTGCTACTGAACAATGAGATCGAAACCTGTAGTCGCTCGGGAGAAAATTACGAGAAGTGTATGTTGACTCA TTGGCGTTGCATACATACTATTTTTGAAGATCTATGCAACAAATATTTCACACCTCATTTA A CACACGAACCATTATCCTTAAAATTTCATTTATTGGCCTGTTGTATACGCCAAGCCGGAGAATATTACGATAAAGAGCCGGAAACTACAGATGTTCAAGATCATGCTTTTTCACCATTAAAGCAACTGATTAGGAAATTCTTAGTCGGTACAGAGCCCTATGGTTTGCCGTTAGGTCAAGAGCAATTCTTACGACAGTCCTTGACTTCGTTCCCCCttcca                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL BG931426             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAATCA TTGGCGTTGCATACATACTATTTTTGAAGATCTATGCGACAAATATTTCACACCTCATTTA A CACACGAACCATTATCCTTAAAATTTCATTTATTGGCCTGTTGTATACGCCAAGCCGGAGAATATTACGATAAAGAGCCGGAAACTACAGATGTTCAAGATCATGCTTTTTCACCATTAAAGCAACTGATTAGGAAATTCTTAGTCGGTACAGAGCCCTATGGTTTGCCGTTAGGTCAAGAGCAATTCTTACGACAGTCCTTGACTTCGag                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD077104             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TA A CACACGAACCATTATCCTTAAAATTTCATTTATTGGCCTGTTGTATACGCCAAGCCGGAGAATATTACGATAAAGAGCCGGAAACTACAGATGTTCAAGATCATGCTTTTTCACCATTAAAGCAACTGATTAGGAAATTTTTAGTCGGTACAGAGCCCTATGGTTTGCCGTTAGGTCAAGAGCAATTCTTACGACAGTCCTTGACTTCGTTCCCCCACCATCAATCGACCTTATGGAGACATATTGTCCAACAAATATCCCCACTACATTTAGGCCATATGCCAACAGCGTTATCCGTTTTTACAAAAACAATCAACGGTACTATCATGTACAATGCTCGTCCTCTTGAACTATGCGCAACATGTGGAGATGGTCCTGAACTAGGAATACCAGGGAAGTTGAAAGCATGTCAGCAATGCAAAATTACTTCCTACTGTTCAGTCTCTTGTCAACGTTTACACTGGTTTACACATAAGAAATTTTGTCCAGTTATTAAAAAACATAAAAAAGAATTTGAATTTGCCAAGTGAAGCATAAATGACATTGCAATTTGTGATACATACACTAACTTTTATTCCACTTTACAACGGATTTGTTGTTCATATTTAATTTAGAATAATTTATTAATAGTAAAGT]
[-] EMBL CD077200             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTTAGTCGGTACAGAGCCCTATGGTTTGCCGTTAGGTCAAGAGCAATTCTTACGACAGTCCTTGACTTCGTTCCCCCACCATCAATCGACCTTATGGAGACATATTGTCCAACAAATATCCCCACTACATTTAGGCCATATGCCAACAGCGTTATCCGTTCTTACAAAAACAATCAACGGTACTATCATGTACAATGCTCGTCCTCTTGAACTATGCGCAACATGTGGAGATGGTCCTGAACTAGGAATACCAGGGAAGTTGAAAGCATGTCAGCAATGCAAAATTACTTCCTACTGTTCAGTCTCTTGTCAACGTTTACACTGGTTTACACATAAGAAATTTTGTCCAGTTATTAAAAAACATAAAAAAGAATTTGAATTTGCCAAGTGAAGCATAAATGACATTGCAATTTGTGATACATACACTAACTTTTATTCCACTTTACAACGGATTTGTTGTTCATATTTAATTTAGAATAATTTATTAATAATAAAGT]
[-] EMBL CD075548             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCAAGAGCAATTTTTACGACAGTCCTTGACTTTGTTCCCCCCCCATCAATTGACCTTATGGAGACATATTGTCCAACAAATATTTCCCCTACATTTAGGCCATATGCCAACAGCGTTATCCGTTTTTACAAAAACAATCAACGGGACTATCATGGACAATGGTTGTCCTCTTGAACTATGGGCAACATGTGGAGATGGTCCTGAACTAGGAATACCAGGGAAGTTGAAAGCATGTCAGCAATGCAAAATTACTTCCTACTGGTCAGTTTTTTGTCAACGTTTACACTGGTTTACACATAAGAAATTTTGTCCAGTTATTTAAAAACATAAAAAAGAATTTGAATTTGCCAAGTGAAGCATAAATGACATTGCAATTTGTGATACATACCCTAACTTTTATTCCCCTTTACAACGGATTTGTTGGTCATATTTAATTTAGAATAATTTATTAATAATAAAGT]




>consensus_10598#0
TCGAGCCAGAATTCGCCGAGGAGAGCTCAGAAGATATACTCGATTCTTTTCGAACTGCGA
TTTCCACATCTGACATAGAAAAGGTTAAATCTCTCCTTTCAGAGGATAGGTCACTAATTA
ACTCCCATGACAAAGAGGGCTTGTCTCCACTGCAATTGGCTTGTTTCCGGGGTAAACTTC
CGATCGTTGAGTTTCTTCTCAAATACGGAGCAAATGTAAATTCTTCTTCCCACAAACAGG
GTTATACTGCCCTAATGTTTGCTGCTCTTTCAGGGAATATTGAGGTTGTTGAGCTTCTTC
TCCATTATGGGGCTCGGATAAATGATGTTAACAGTATTGGAAAGACTGCTTCTCAAATGG
CCGCATTTGTGGGAAATCATAACGTCGTCACTCTTATTAATAACTATCTGGAAAGAGAAG
AAATAGCCATTTATGTGTCGAAGTCCCAATTACTACCTGAACATGCATCTGCGATTCACC
AACTAGTTTTGCAGTTAAATATTTCACCTATTAAAGTCTTTCTGCTACTGAACAATGAGA
TCGAAACCTGTAGTCGCTCGGGAGAAAATTACGAGAAGTGTATGTTGACTCATTGGCGTT
GCATACATACTATTTTTGAAGATCTATGCAACAAATATTTCACACCTCATTTAACACACG
AACCATTATCCTTAAAATTTCATTTATTGGCCTGTTGTATACGCCAAGCCGGAGAATATT
ACGATAAAGAGCCGGAAACTACAGATGTTCAAGATCATGCTTTTTCACCATTAAAGCAAC
TGATTAGGAAATTCTTAGTCGGTACAGAGCCCTATGGTTTGCCGTTAGGTCAAGAGCAAT
TCTTACGACAGTCCTTGACTTCGTTCCCCCACCATCAATCGACCTTATGGAGACATATTG
TCCAACAAATATCCCCACTACATTTAGGCCATATGCCAACAGCGTTATCCGTTTTTACAA
AAACAATCAACGGTACTATCATGTACAATGCTCGTCCTCTTGAACTATGCGCAACATGTG
GAGATGGTCCTGAACTAGGAATACCAGGGAAGTTGAAAGCATGTCAGCAATGCAAAATTA
CTTCCTACTGTTCAGTCTCTTGTCAACGTTTACACTGGTTTACACATAAGAAATTTTGTC
CAGTTATTAAAAAACATAAAAAAGAATTTGAATTTGCCAAGTGAAGCATAAATGACATTG
CAATTTGTGATACATACACTAACTTTTATTCCACTTTACAACGGATTTGTTGTTCATATT
TAATTTAGAATAATTTATTAATAATAAAGT

consensusID : consensus_10598#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 730
fasta sequence

                              [AGGACAGGCCGAATGTATGATGAAACATTCACAATTGCTGTCTAATATTTAGAAGTGCAACAGAGTTATGAGCTCAGAAGATATACTCGATTCTTTTCGAACTGCTATTTCCACATCTGACATAGAAAAGGTTAAATCTCTCCTTTCAGAGGATAGGTCACTAATTAACTCCCATGACAAAGAGGGCTTGTCTCCACTGCAATTGGCTTGTTTCCGGGGTAAACTTCCGATCGTTGAGTTTCTTCTCAAATACGGAGCAAATGTAAATTCTTCTTCCCACAAACAGGGTTATACTGCCCTAATGTTTGCTGCTCTTTCAGGTTTGCCACTATAGGTTTACAATTTTGTAGGGAATATTGAGGTTGTTGAGCTTCTTCTCCATTATGGNGCTCGGATAAATGATGTTAACAGTATTGGGAAGACTGCTTCTCAAATGGCCGCATTTGTGGGAAATCATAACGTCGTCACTCTTATTAATAACTATCTGGAAAGAGAAGAAATAGCCCTTTATGTGTCGAAGTCCCAATTACTGCGTGAACATGCATATGCGATTCACCAACTAGTTTTGCAGTTAAATATTTCACCTATTAAAAACATAAAAAAGAATTTGAATTTGCCAAGTGAAGCATAAATGACATTGCAATTTGTGATACATACACTAACTTTTATTCCACTTTACAACGGATTTGTTGTTCATATTTAATTTAGAATAATTTATTAATAATAAAGT]

[+] EMBL AI067700             [AGGACAGGCCGAATGTATGATGAAACATTCACAATTGCTGTCTAATATTTAGAAGTGCAACAGAGTTATGAGCTCAGAAGATATACTCGATTCTTTTCGAACTGCTATTTCCACATCTGACATAGAAAAGGTTAAATCTCTCCTTTCAGAGGATAGGTCACTAATTAACTCCCATGACAAAGAGGGCTTGTCTCCACTGCAATTGGCTTGTTTCCGGGGTAAACTTCCGATCGTTGAGTTTCTTCTCAAATACGGAGCAAATGTAAATTCTTCTTCCCACAAACAGGGTTATACTGCCCTAATGTTTGCTGCTCTTTCAGGTTTGCCACTATAGGTTTACAATTTTGTAGGGAATATTGAGGTTGTTGAGCTTCTTCTCCATTATGGNGCTCGGATAAATGATGTTAACAGTATTGGGAAGACTGCTTCTCAAATGGCCGCATTT                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD076906             [                                                                                                                                                                                                                                                                                                                                                                                            ATTATGGGGCTCGGATAAATGATGTTAACAGTATTGGAAAGACTGCTTCTCAAATGGCCGCATTTGTGGGAAATCATAACGTCGTCACTCTTATTAATAACTATCTGGAAAGAGAAGAAATAGCCCTTTATGTGTCGAAGTCCCAATTACTGCGTGAACATGCATATGCGATTCACCAACTAGTTTTGCAGTTAAATATTTCACCTATTAAAAACATAAAAAAGAATTTGAATTTGCCAAGTGAAGCATAAATGACATTGCAATTTGTGATACATACACTAACTTTTATTCCACTTTACAACGGATTTGTTGTTCATATTTAATTTAGAATAATTTATTAATAATAAAGT]




>consensus_10598#1
AGGACAGGCCGAATGTATGATGAAACATTCACAATTGCTGTCTAATATTTAGAAGTGCAA
CAGAGTTATGAGCTCAGAAGATATACTCGATTCTTTTCGAACTGCTATTTCCACATCTGA
CATAGAAAAGGTTAAATCTCTCCTTTCAGAGGATAGGTCACTAATTAACTCCCATGACAA
AGAGGGCTTGTCTCCACTGCAATTGGCTTGTTTCCGGGGTAAACTTCCGATCGTTGAGTT
TCTTCTCAAATACGGAGCAAATGTAAATTCTTCTTCCCACAAACAGGGTTATACTGCCCT
AATGTTTGCTGCTCTTTCAGGTTTGCCACTATAGGTTTACAATTTTGTAGGGAATATTGA
GGTTGTTGAGCTTCTTCTCCATTATGGNGCTCGGATAAATGATGTTAACAGTATTGGGAA
GACTGCTTCTCAAATGGCCGCATTTGTGGGAAATCATAACGTCGTCACTCTTATTAATAA
CTATCTGGAAAGAGAAGAAATAGCCCTTTATGTGTCGAAGTCCCAATTACTGCGTGAACA
TGCATATGCGATTCACCAACTAGTTTTGCAGTTAAATATTTCACCTATTAAAAACATAAA
AAAGAATTTGAATTTGCCAAGTGAAGCATAAATGACATTGCAATTTGTGATACATACACT
AACTTTTATTCCACTTTACAACGGATTTGTTGTTCATATTTAATTTAGAATAATTTATTA
ATAATAAAGT

consensusID : consensus_10598#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 680
fasta sequence

                              [GAACAGTAGGAAATATAAATAATCAAAACATCACTTGGTGTTTGCATGATTTTCTGTTGTATTACCATTTTGTCCAGAAGCTGCTGTATCACATGAAACATCCTGATTAACAAACATGGAAGGATCAAATACGCCTTGGGTAATCGCCATTTCAGTTTTAACTGAGCTTAGTTCACTTAGGAAGTTTTGTGCCACCTCATGTTGGACACTTGGAGTTAGAGAATCCCAATTGTGAATGTAAGTCCAAGGTTCTTCAAGAACTTTCTGATATGCTATTGAATTTTGCAAACAAGATAAATCCATATGAGGAAGAACGAATTCGTCATCTAAAACGTAAGGAAACAGTAGTAATGAGTTTATTTTAAGAATAGAATTAGCACTCACTAAAAAAGGTAGAATGCAAAATAAAATTAGCAGTCAAACTGTCGGAATACATTATTGAATCTCAAGACTATCTAACTTTAGATAGTAATAGTAGGCTATTTAAGTTCACAAGGTAGTATATGATAAACTGAATTTCTCGTTATTAAAGAAAAGTCAGCTGATGCATACTGATCGCTAATTTACTAAAGAACTAAACACTAATAACTGTTTTACAGAAGTTTAGATTACAGTTCTTTCATACTATTCATTTAAGGATTGGNTAAGGAACACAGCGTANACTTAGACCTATATTTGAT]

[+] EMBL AI067445             [GAACAGTAGGAAATATAAATAATCAAAACATCACTTGGTGTTTGCATGATTTTCTGTTGTATTACCATTTTGTCCAGAAGCTGCTGTATCACATGAAACATCCTGATTAACAAACATGGAAGGATCAAATACGCCTTGGGTAATCGCCATTTCAGTTTTAACTGAGCTTAGTTCACTTAGGAAGTTTTGTGCCACCTCATGTTGGACACTTGGAGTTAGAGAATCCCAATTGTGAATGTAAGTCCAAGGTTCTTCAAGAACTTTCTGATATGCTATTGAATTTTGCAAACAAGATAAATCCATATGAGGAAGAACGAATTCGTCATCT                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD085059             [                                                                                                   ATCCTGATTAACAAACATGGAAGGATCAAATACGCCTTGGGTAATCGCCATTTCAGTTTTAACTGAGCTTAGTTCACTTAGGAAGTTTTGTGCCACCTCTTGTTGGACACTTGGAGTTAGAGAATCCCAATTGTGAAGGTAAGTCCAAGGTTCTACAAGAACTTTCTGATATGCTATTGAATTTTGCAAACAAGATAAATCCATATGAGGAACAACGAATTCGTCATCTAAAACGTAAGGAAACAGTAGTAATGAGTTTATTTTAAGAATAGAATTAGCACTCACTAAAAAAGGTAGAATGCAAAATAAAATTAGCAGTCAAACTGTCGGAATACATTATTGAATCTCAAGACTATCTAACTTTAGATAGTAATAGTAGGCTATTTAAGTTCACAAGGTAGTATATGATAAACTGAATTTCTCGTTATTAAAGAAAAGTCAGCTGATGCATACTGATCGCTAATTTACTAAAGAACTAAACACTAATAACTGTTTTACAGAAGTTTAGATTACAGTTCTTTCATACTATTCATTTAAGGATTGGNTAAGGAACACAGCGTANACTTAGACCTATATTTGAT]




>consensus_10598#2
GAACAGTAGGAAATATAAATAATCAAAACATCACTTGGTGTTTGCATGATTTTCTGTTGT
ATTACCATTTTGTCCAGAAGCTGCTGTATCACATGAAACATCCTGATTAACAAACATGGA
AGGATCAAATACGCCTTGGGTAATCGCCATTTCAGTTTTAACTGAGCTTAGTTCACTTAG
GAAGTTTTGTGCCACCTCATGTTGGACACTTGGAGTTAGAGAATCCCAATTGTGAATGTA
AGTCCAAGGTTCTTCAAGAACTTTCTGATATGCTATTGAATTTTGCAAACAAGATAAATC
CATATGAGGAAGAACGAATTCGTCATCTAAAACGTAAGGAAACAGTAGTAATGAGTTTAT
TTTAAGAATAGAATTAGCACTCACTAAAAAAGGTAGAATGCAAAATAAAATTAGCAGTCA
AACTGTCGGAATACATTATTGAATCTCAAGACTATCTAACTTTAGATAGTAATAGTAGGC
TATTTAAGTTCACAAGGTAGTATATGATAAACTGAATTTCTCGTTATTAAAGAAAAGTCA
GCTGATGCATACTGATCGCTAATTTACTAAAGAACTAAACACTAATAACTGTTTTACAGA
AGTTTAGATTACAGTTCTTTCATACTATTCATTTAAGGATTGGNTAAGGAACACAGCGTA
NACTTAGACCTATATTTGAT

consensusID : consensus_10598#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 657
fasta sequence

                              [ACAATGCTCGTCCTCTTGAACTATGCGCAACATGTGGAGATGGTCCTGAACTAGGAATACCAGGGAAGTTGAAAGCATGTCAGCAATGCAAAATTACTTCCTACTGTTCAGTCTCTTGTCAACGTTTACACTGGTTTACACATAAGAAATTTTGTCCAGTTATTAAAAAACATAAAAAAGAATTTGAATTTGCCAAGTGAAGCATAAATGACATTGCAATTTGTGATACATACACTAACTTTTATTCCACTTTACAACGGATTTGTTGTTCATATTTAATTTAGAATAATTTCGTCGCCCTGAAGCATGGCTTCTCAAGATGACGAATTCGTTGTT-CCTCATATGGATTTATCTTGTTTGCAAAATTCAATAGCATATCAGAAAGTTCTTGAAGAACCTTGGACTTACCTTCACAATTGGGATTCTCTAACTCCAAGTGTCCAACAAGAGGTGGCACAAAACTTCCTAAGTGAACTAAGCTCAGTTAAAACTGAAATGGCGATTACCCAAGGCGTATTTGATCCTTCCATGTTTGTTAATCAGGATGTTTCATGTGATACAGCAGCTTCTGGACAAAATGGTAATACAACAGAAAATCATGCAAACACCAAGTGATGTTTTGATTATTTATATTTCCTACTGTTCTAAATAAAGTTT]

[-] EMBL AI067931             [ACAATGCTCGTCCTCTTGAACTATGCGCAACATGTGGAGATGGTCCTGAACTAGGAATACCAGGGAAGTTGAAAGCATGTCAGCAATGCAAAATTACTTCCTACTGTTCAGTCTCTTGTCAACGTTTACACTGGTTTACACATAAGAAATTTTGTCCAGTTATTAAAAAACATAAAAAAGAATTTGAATTTGCCAAGTGAAGCATAAATGACATTGCAATTTGTGATACATACACTAACTTTTATTCCACTTTACAACGGATTTGTTGTTCATATTTAATTTAGAATAATTTCGTCGCCCTGAAGCATGGCTTCTCAAGATGACGAATTCGTTGTT CCTCATATGGATTTATCTTGTTTGCAAAATTCAATAGCATATCAGAAAGTTCTTGAAGAACCTTGGACTTACCTTCACAATTGGGATTCTCTAACTCCAAGTGTCCAACAAGAGGTGGCACAAAACTTCCTAAGTGAACTAAGCTCAGTTAAAACTGAAATGGCGATTACCCAAGGCGTATTTGATCCTTCCATGTTTGTTAATCAGGATGTTTCATGTGATACAGCAGCTTCTGGACAAAATGGTAATACAACAGAAAATCATGCAAAC                                                   ]
[-] EMBL AI068331             [                                                                                                                                                                                                    GTGAAGCATAAATGACATTGCAATTTGTGATACATACACTAACTTTTATTCCACTTTACAACGGATTTGTTGTTCATATTTAATTTAGAATAATTTCGTCGCCCTGAAGCATGGCTTCTCAAGATGACGAATTCGTTGTT CCTCATATGGATTTATCTTGTTTGCAAAATTCAATAGCATATCAGAAAGTTCTTGAAGAACCTTGGACTTACCTTCACAATTGGGATTCTCTAACTCCAAGTGTCCAACAAGAGGTGGCACAAAACTTCCTAAGTGAACTAAGCTCAGTTAAAACTGAAATGGCGATTACCCAAGGCGTATTTGATCCTTCCATGTTTGTTAATCAGGATGTTTCATGTGATACAGCAGCTTCTGGACAAAATGGTAATACAACAGAAAATCATGCAAAC                                                   ]
[-] EMBL AI068023             [                                                                                                                                                                                                                  ACATTGCAATTTGTGATACATACACTAACTTTTATTCCACTTTACAACGGATNTGTTGTTCATATTTAATTTAGAATAATTTCGTCGCCCTGAAGCATGGCTTCTCAAGATGACGAATTCGTTGTT CCTCATATGGATTTATCTTGTTTGCAAAATTCAATAGCATATCAGAAAGTTCTTGAAGAACCTTGGACTTACCTTCACAATTGGGATTCTCTAACTCCAAGTGTCCAACAAGAGGTGGCACAAAACTTCCTAAGTGAACTAAGCTCAGTTAAAACTGAAATGGCGATTACCCAAGGCGTATTTGATCCTTCCATGTTTGTTAATCAGGATGTTTCATGTGATACAGCAGCTTCTGGACAAAATGGTAATACAACAGAAAATCATGCAAAC                                                   ]
[-] EMBL AI067512             [                                                                                                                                                                                                                                  TACATACACTAACTTTTATTCCACTTAACAACGGATTTGTTGTTCATATTTAATTTAGAATAATTTCGTCGCCCTGAAGCATGGCTTCTCAAGATGACGAATTCGTTGTT CCTCATATGGATTTATCTTGTTTGCAAAATTCAATAGCATATCAGAAAGTTCTTGAAGAACCTTGGACTTACCTTCACAATTGGGATTCTCTAACTCCAAGTGTCCAACAAGAGGTGGCACAAAACTTCCTAAGTGAACTAAGCTCAGTTAAAACTGAAATGGCGATTACCCAAGGCGTATTTGATCCTTCCATGTTTGTTAATCAGGATGTTTCATGTGATACAGCAGCTTCTGGACAAAATGGTAATACAACAGAAAATCATGCAAAC                                                   ]
[-] EMBL SMAA40604            [                                                                                                                                                                                                                                                                                                           CTGAAGCATGGCTTCTCAAGATGACGAATTCGTTGTTCCCCCATATGGAGTTATCTTGTTTGCAAAATTCAATAGCATATCAGAAAGTTCTTGAAGAACCTTGGACTTACCTTCACAATTGGGATTCTCTAACTCCAAGTGTCCAACAAGAGGTGGCACAAAACTTCCTAAGTGAACTAAGCTCAGTTAAAACTGAAATGGCGATTACCCAAGGCGTATTTGANCCTTCCATGTTTGTTAATCAGGATGTTTCATGTGATACAGCAGCTTCTGGACAAAATGGTAATACAACAGAAAATCATGCAAACACCAAGTGATGTTTTGATTATTTATATTTCCTACTGTTCTAAATAAAGTTT]




>consensus_10598#3
ACAATGCTCGTCCTCTTGAACTATGCGCAACATGTGGAGATGGTCCTGAACTAGGAATAC
CAGGGAAGTTGAAAGCATGTCAGCAATGCAAAATTACTTCCTACTGTTCAGTCTCTTGTC
AACGTTTACACTGGTTTACACATAAGAAATTTTGTCCAGTTATTAAAAAACATAAAAAAG
AATTTGAATTTGCCAAGTGAAGCATAAATGACATTGCAATTTGTGATACATACACTAACT
TTTATTCCACTTTACAACGGATTTGTTGTTCATATTTAATTTAGAATAATTTCGTCGCCC
TGAAGCATGGCTTCTCAAGATGACGAATTCGTTGTTCCTCATATGGATTTATCTTGTTTG
CAAAATTCAATAGCATATCAGAAAGTTCTTGAAGAACCTTGGACTTACCTTCACAATTGG
GATTCTCTAACTCCAAGTGTCCAACAAGAGGTGGCACAAAACTTCCTAAGTGAACTAAGC
TCAGTTAAAACTGAAATGGCGATTACCCAAGGCGTATTTGATCCTTCCATGTTTGTTAAT
CAGGATGTTTCATGTGATACAGCAGCTTCTGGACAAAATGGTAATACAACAGAAAATCAT
GCAAACACCAAGTGATGTTTTGATTATTTATATTTCCTACTGTTCTAAATAAAGTTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10598#0      --------------------------------------------------TCGAGCCAGA 10
consensus_10598#1      ---AGGACAGGCCGAATGTATGATGAAACATTCACAATTGCTGTCTAATATTTAGAAGTG 57
consensus_10598#3      ACAATGCTCGTCCTCTTGAACTATGCGCAACATGTGGAGATGGTCCTGAACTAGGAATAC 60
consensus_10598#2      --------------------------------------------------------GAAC 4
                                                                                   

consensus_10598#0      ATTCGCCGAGGAGAGCTCAGAAGATATACTCGATTCTTTTCGAACTGCGATTTCCACATC 70
consensus_10598#1      CAACAGAGTTATGAGCTCAGAAGATATACTCGATTCTTTTCGAACTGCTATTTCCACATC 117
consensus_10598#3      CAGGGAAGTTGAAAGCATGTCAGCAATGCAAAATTACTTCC----TACTGTTCAGTCTCT 116
consensus_10598#2      AGTAGGAAATATAAATAATCAAAACATCACTTGGTGTTTGC-----ATGATTTTCTGTTG 59
                                    *       *   **       *  ** *         **        

consensus_10598#0      TGACATAGAAAAGGTTAAATCTCTCCTTTCAGAGGATAGGTCACTAATTAACTCCCATGA 130
consensus_10598#1      TGACATAGAAAAGGTTAAATCTCTCCTTTCAGAGGATAGGTCACTAATTAACTCCCATGA 177
consensus_10598#3      TGTCAACGTTTACACTGG-TTTACACATAAGAAATTTTGTCCAGTTATTAAAAAACATAA 175
consensus_10598#2      TATTACCATTTTGTCCAGAAGCTGCTGTATCACATGAAACATCCTGATTAACAAACATGG 119
                       *   *                      *                * *****    ***  

consensus_10598#0      CAAAGAGGGCTTGTCTCCACTGCAATTGGCTTGTTTCCGGGGTAAACTTCCGATCGTTG- 189
consensus_10598#1      CAAAGAGGGCTTGTCTCCACTGCAATTGGCTTGTTTCCGGGGTAAACTTCCGATCGTTG- 236
consensus_10598#3      --AAAAGAATTTGAATTTGCCAAGTGAAGCATAAATGACATTGCAATTTGTGATACATAC 233
consensus_10598#2      ----AAGGA------TCAAATACGCCTTGGGTAATCGCCATTTCAGTTT----TAACTG- 164
                            **        *            *  *            *  **    *   *  

consensus_10598#0      ---AGTTTCTTCTCAAATACGGAGCAAATGTAA-ATTCTTCTTCCCACAAACAGGGTTAT 245
consensus_10598#1      ---AGTTTCTTCTCAAATACGGAGCAAATGTAA-ATTCTTCTTCCCACAAACAGGGTTAT 292
consensus_10598#3      ACTAACTTTTATTCCACTTTACAACGGATTTGTTGTTCATATTTAATTTAGAATAATTTC 293
consensus_10598#2      ---AGCT--TAGTTCACTTAGGAAGTTTTGTGCCACCTCATGTTGGACACTTGGAGTTAG 219
                          *  *  *  *  * *    *     * *           *             **  

consensus_10598#0      ACTGCCCTAATGTTTGCTGCTCTTTCAGG------------------------------G 275
consensus_10598#1      ACTGCCCTAATGTTTGCTGCTCTTTCAGGTTTGCCACTATAGGTTTACAATTTTGTAGGG 352
consensus_10598#3      GTCGCCCTGAAGCATG--GCTTCTCAAG-------------------------------- 319
consensus_10598#2      AGAATCCCAATTGTGAATGTAAGTCCAAGGTTC--------------------------- 252
                            **  *        *    *  *                                 

consensus_10598#0      AATATTGAGGTTGTTGAGCTTCTTCTCCATT-ATGGGGCTCGGATAAATGATGTTAACAG 334
consensus_10598#1      AATATTGAGGTTGTTGAGCTTCTTCTCCATT-ATGGNGCTCGGATAAATGATGTTAACAG 411
consensus_10598#3      -ATGACGAATTCGTTGTTCCTCATATGGATTTATCTTGTTTGCAAAATTCAA--TAGCA- 375
consensus_10598#2      -TTCAAGAACTTTCTGATATGCTATTGAATT-TTGCAAACAAGATAAATCCATATGA--- 307
                         *   **  *   **     *   *  ***  *         * ** *     *     

consensus_10598#0      TATTGGAAAGACTGCTTCTCAAATGGCCGCATTTGTGGGAAATCATAACGTCGTCACTCT 394
consensus_10598#1      TATTGGGAAGACTGCTTCTCAAATGGCCGCATTTGTGGGAAATCATAACGTCGTCACTCT 471
consensus_10598#3      TATCAGAAAG-----TTCTTGAAGAACCTTGGACTTACCT--TCACAATTGGGATTCTCT 428
consensus_10598#2      ----GGAAGAACGAATTCGTCATCTAAAACGTAAGGAAACAGTAGTAATGAGTTTATTTT 363
                            * *       ***   *                    *   **         * *

consensus_10598#0      TATTA-ATAACTATCTGGAAAGAGAAGAAATAGCCATTTATGTGTCGAAGTCCCAATTAC 453
consensus_10598#1      TATTA-ATAACTATCTGGAAAGAGAAGAAATAGCCCTTTATGTGTCGAAGTCCCAATTAC 530
consensus_10598#3      AACTC--CAAGTGTCCAACAAGAGGTGGCACAAAACTTCCTAAGTGAA----CTAAGCTC 482
consensus_10598#2      AAGAATAGAATTAGCACTCACTAAAAAAGGTAGAA--TGCAAAATAAAATTAGCAGTCAA 421
                        *      ** *  *    *  *        *     *      *  *      *     

consensus_10598#0      TACCTGAACATGCATCTGCGATTCACCAACTAGTTT---TGCAGTTAAATAT-TTCACCT 509
consensus_10598#1      TGCGTGAACATGCATATGCGATTCACCAACTAGTTT---TGCAGTTAAATAT-TTCACCT 586
consensus_10598#3      AGTTAAAAC-TGAAATGGCGATTACCCAAGGCGTAT---TTGATCCTTCCATGTTTGTTA 538
consensus_10598#2      ACTGTCGGAATACATTATTGAATCTCAAGACTATCTAACTTTAGATAGTAATAGTAGGCT 481
                                 *  *     ** *  * *     * *   *  *       **  *     

consensus_10598#0      ATTAAAGTCTTTCTGCTACTGAACAATGAGATCGAAACCTGTAGTCGCTCGGGAGAAAAT 569
consensus_10598#1      ATTAAA---------------AACATAAAAA--AGAATTTGAATTTGCCAAGTGAAGCAT 629
consensus_10598#3      ATCAGGATGTTTC--------ATGTGATACAGCAGCTTCTGGACAAAATGGTAATACAAC 590
consensus_10598#2      ATTTAAGTTCACA--------AGGTAGTATATGATAAACTGAATTT-CTCGTTATTAAAG 532
                       **                   *      * *        ** *               * 

consensus_10598#0      TACGAGAAGTGTATGTTGACTCATTGGCG--TTGCATACATACTATTTTTGAAGATCTAT 627
consensus_10598#1      ------AAATG-ACATTG--CAATTTGTG--ATACATACAC-TAACTTTTATTCCACTTT 677
consensus_10598#3      A--GAAAATCATGCAAACACCAAGTGATG--TTTTGATTATTTATATTTCCTACTGTTCT 646
consensus_10598#2      AAAAGTCAGCTGATGCATACTGATCGCTAATTTACTAAAGAACTAAACACTAATAACTGT 592
                              *              *         *                        * *

consensus_10598#0      GCAACAAATAT----TTCACACCTCATTTAACACACGAACCATTATCCTTAAAATTTCAT 683
consensus_10598#1      ACAACGGATTTGTTGTTCATATTTAATTTAGAATA--ATTTATTAATAATAAAGT----- 730
consensus_10598#3      AAATAAAGTTT------------------------------------------------- 657
consensus_10598#2      TTTACAGAAGTTTAGATTACAGTTCTTT---CATACTATTCATT-----TAAGGATTGGN 644
                                 *                                                 

consensus_10598#0      TTATTGGCCTGTTGTATACGCCAAGCCGGAGAATATTACGATAAAGAGCCGGAAACTACA 743
consensus_10598#1      ------------------------------------------------------------
consensus_10598#3      ------------------------------------------------------------
consensus_10598#2      TAAGGAACACAGCGTANACTTAGACCTATATTTGAT------------------------ 680
                                                                                   

consensus_10598#0      GATGTTCAAGATCATGCTTTTTCACCATTAAAGCAACTGATTAGGAAATTCTTAGTCGGT 803
consensus_10598#1      ------------------------------------------------------------
consensus_10598#3      ------------------------------------------------------------
consensus_10598#2      ------------------------------------------------------------
                                                                                   

consensus_10598#0      ACAGAGCCCTATGGTTTGCCGTTAGGTCAAGAGCAATTCTTACGACAGTCCTTGACTTCG 863
consensus_10598#1      ------------------------------------------------------------
consensus_10598#3      ------------------------------------------------------------
consensus_10598#2      ------------------------------------------------------------
                                                                                   

consensus_10598#0      TTCCCCCACCATCAATCGACCTTATGGAGACATATTGTCCAACAAATATCCCCACTACAT 923
consensus_10598#1      ------------------------------------------------------------
consensus_10598#3      ------------------------------------------------------------
consensus_10598#2      ------------------------------------------------------------
                                                                                   

consensus_10598#0      TTAGGCCATATGCCAACAGCGTTATCCGTTTTTACAAAAACAATCAACGGTACTATCATG 983
consensus_10598#1      ------------------------------------------------------------
consensus_10598#3      ------------------------------------------------------------
consensus_10598#2      ------------------------------------------------------------
                                                                                   

consensus_10598#0      TACAATGCTCGTCCTCTTGAACTATGCGCAACATGTGGAGATGGTCCTGAACTAGGAATA 1043
consensus_10598#1      ------------------------------------------------------------
consensus_10598#3      ------------------------------------------------------------
consensus_10598#2      ------------------------------------------------------------
                                                                                   

consensus_10598#0      CCAGGGAAGTTGAAAGCATGTCAGCAATGCAAAATTACTTCCTACTGTTCAGTCTCTTGT 1103
consensus_10598#1      ------------------------------------------------------------
consensus_10598#3      ------------------------------------------------------------
consensus_10598#2      ------------------------------------------------------------
                                                                                   

consensus_10598#0      CAACGTTTACACTGGTTTACACATAAGAAATTTTGTCCAGTTATTAAAAAACATAAAAAA 1163
consensus_10598#1      ------------------------------------------------------------
consensus_10598#3      ------------------------------------------------------------
consensus_10598#2      ------------------------------------------------------------
                                                                                   

consensus_10598#0      GAATTTGAATTTGCCAAGTGAAGCATAAATGACATTGCAATTTGTGATACATACACTAAC 1223
consensus_10598#1      ------------------------------------------------------------
consensus_10598#3      ------------------------------------------------------------
consensus_10598#2      ------------------------------------------------------------
                                                                                   

consensus_10598#0      TTTTATTCCACTTTACAACGGATTTGTTGTTCATATTTAATTTAGAATAATTTATTAATA 1283
consensus_10598#1      ------------------------------------------------------------
consensus_10598#3      ------------------------------------------------------------
consensus_10598#2      ------------------------------------------------------------
                                                                                   

consensus_10598#0      ATAAAGT 1290
consensus_10598#1      -------
consensus_10598#3      -------
consensus_10598#2      -------