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Schistosoma mansoni
cluster # 10626 cluster # 10626       Sequences # 19       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10626#0 length = 1522 sequences # 12  
 consensus_10626#1 length = 770 sequences # 4  
consensus_10626#2 length = 456 sequences # 3  
consensusID : consensus_10626#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1522
fasta sequence 
                              [AATGACATGATTTTATTTACATATTAAATTTACAGGTAGATATAATTCAAAATCGATTTCGCTAGGGAGTAGTTTTGTCTTCATACTTCCGGATGATGCATGTGACTAGTTGAAGTCCAAATGGCGGCTAGGGTGGTAATTCGAGTGCTTGGGACGTCATATGTGAACAAAGGGATGAATGAACTTCCTGGCTCAAGGATGTCTGTCGAGTTGAAATTTACAGCATAACCTCGTAAATGGCTACCATCAGCGTCTGTCGTAACAACTACTACCAACCGACTACGTCCACAGCACATTGGTTCTTTTTCTGCCAAATAGGATGGCCAGTGTAAAACCTGAATGAATTTGATTCGTTTACCCGGCAAAAGTACTTTGCTTGTAATTTTAGGTGTCAATGGCTCAGACGTGTTATTTCGGACGTTGAATTTAATCAAAGTGAGTGATGCGTCAATACCAA-CCAA-TACATATGCAAATAAGGGGTCTGAAGACTTTTGACTACAGAGTTCATCATCTTCACTGAAGAAAGTAGGGTCTGAAGTAAGGGGATTAGGAAACTGAACGCTGCCAACAATGAAGGCTTCATTTTTGCTAGTATCAGGGCTTATTTGCGATCCACTAAGAAGGTCAATCATATCGAATTTATTCGGCCAAATAAAAAGAAGGCGATTACCAGTAGGTGACATTGAGATTTTATTTGCTTCATTTGCCAGATTTTTCAGTCTAACAGCATAAGCCTGTCGACCACGAAGAAGATTCCATACACGAAACGTTTTGTCTGCACTGATGGAGAAAAGGCAGCGGTTGGAAGGGTGCACTGCTATACTTTGGACTGACCCTTTATGGCGACGAATTTGACGAATACACTCCCAAGCCGATGGATGTGGGCATTTGATAAGTTTACCTCCCGGGGATTCGCAACGCCAAATACCAATACATCCATCATCACCAGCACTGAAAAAATGACAGTACGCCGAGTCATGTGGTTCTGTAATAAATTTGAGCTGTCTTATGGTCCCAACATGCATTTCGAGTGCACCTACACGAGTTTTTGTATGTACTGAAAATACCTGAATAATTTCATCGCTACTTCCAGAAAT-ACCACATCATCCTTTGTANCTATGNGTGNGACTGGTGCAAGATGTGCTGNANGATCNATGAATATGGCCTTTAACAGTTTCCGACCACCCTTTTCAATAGTTTGATGGGGATTTTTTACCGCAAAACCCTCCCCTCTTTTGTCCACCAGAACCCCACCCAAAAACTTGGGCGCACTCAAAATGTTACCGGGGCCTGGTTTTAATTTCCGAAACTTTTTTGGGCAGGGCGAAAACCCCCTTAATTAACCAGATTTTTGGCTGGGCCACAGATTCCCTAAACCCTCCACCAAATTTGGGATCGGGGGGGAATCTCTCTCGGGCAATTTTGCCCGGGGGCCATTCCTTTAGGGGGGTATAAAACNAAAATTTTATATTTTTCTGGGAAAAATTTTTCCAAAAACCCAAAATAAGGGGGAAAAAAAAAA]

[+] EMBL CD074152             [AATGACATGATTTTATTTACATATTAAATTTACAGGTAGATATAATTCAAAATCGATTTCGCTAGGGAGTAGTTTTGTCTTCATACTTCCGGATGATGCATGTGACTAGTTGAAGTCCAAATGGCGGCTAGGGTGGTAATTCGAGTGCTTGGGACGTCATATGTGAACAAAGGGATGAATGAACTTCCTGGCTCAAGGATGTCTGTCGAGTTGAAATTTACAGCATAACCTCGTAAATGGCTACCATCAGCGTCTGTCGTAACAACTACTACCAACCGACTACGTCCACAGCACATTGGTTCTTTTTCTGCCAAATAGGATGGCCAGTGTAAAACCTGAATGAATTTGATTCGTTTACCCGGCAAAAGTACTTTGCTTGTAATTTTAGGTGTCAATGGCTCAAACGTGTTATTTCGGACGTTGAATTTAATCAAAGTGAGTGATGCGTCAATACCAA CCAA TACATATGCAAATAAGGGGTCTGAAGACTTTTGACTACAGAGTTCATCATCTTCACTGAAGAAAGTAGGGTCTGAAGTAAGGGGATTAGGAAACTGAACGCTGCCAACAATGAAGGCTTCATTTTTGCTAGTATCAGGGCTTATTTGCGATCCACTAAGAAGGTCAATCATATCGAATTTATTCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD112646             [                                                                                                                                                                                                                                                                                                             CTTTTTCTGCCAGATAGGATGGCCAGTGTAGAACCTGAATGAATTTGATTCGTTTACCCGGCAAAAGTACTTTGCTTGTAATTTTAGGTGTCAATGACTCAGACGTGTTATTTCGGACGTTGAATTTAATCAAAGTGAGTGATGCGTCAATACCAA CCAA TACATATGCAAATAAGGGGTCTGAAGACTTTTGACTACAGAGTTCATCATCTTCACTGAAGAAAGTAGGGTCTGAAGTAAGGGGATTAGGAAACTGAACGCTGCCAACAATGAAGGCTTCATTTTTGCTAGTATCAGGGCTTATTTGCGATCCACTAAGAAGGTCAATCATATCGAATTTATTCGGCCAAATAAAAAGAAGGCGATTACCAGTAGGTGACATTGAGATTTTATTTGCTTCATTTGCCAGATTTTTCAGTCTAACAGCATAAGCCTGTCGAACACGAAGAAGATT CATACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD150294             [                                                                                                                                                                                                                                                                                                                                                    TGAATTTGATTCGTTTACCCGGCAAAAGTACTTTGCTTGTAATTTTAGGTGTCAATGGCTCAGACGTGTTATTTCGGACGTTGAATTTAATCAAAGTGAGTGATGCGTCAATACCAA CCAA TACATATGCAAATAAGGGGTCTGAAGACTTTTGACTACAGAGTTCATCACCTTCACTGAAGAAAGTAGGGTCTGAAGTAAGGGGATTAGGAAACTGAACGCTGCCAACAATGAAGGCTTCATTTTTGCTAGTATCAGGGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD150160             [                                                                                                                                                                                                                                                                                                                                                    TGAATTTGATTCGTTTACCCGGCAAAAGTACTTTGCTTGTAATTTTAGGTGTCAATGGCTCAGACGTGTTATTTCGGACGTTGAATTTAATCAAAGTGAGTGATGCGTCAATACCAA CCAA TACATATGCAAATAAGGGGTCTGAAGACTTTTGACTACAGAGTTCATCATCTTCACTGAAGAAAGTAGGGTCTGAAGTAAGGGGATTAGGAAACTGAACGCTGCCAACAATGAAGGCTTCATTTTTGCTAGTATCAGGGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD150134             [                                                                                                                                                                                                                                                                                                                                                    TGAATTTGATTCGTTTACCCGGCAAAAGTACTTTGCTTGTAATTTTAGGTGTCAATGGCTCAGACGTGTTATTTCGGACGTTGAATTTAATCAAAGTGAGTGATGCGTCAATACCAA CCAA TACATATGCAAATAAGGGGTCTGAAGACTTTTGACTACAGAGTTCATCATCTTCACTGAAGAAAGTAGGGTCTGAAGTAAGGGGATTAGGAAACTGAACGCTGCCAACAATGAAGGCTTCATTTTTGCTAGTATCAGGGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD079957             [                                                                                                                                                                                                                                                                                                                                                                                                                                  CGTTGAATTTAATCAAAGTGAGTGATGCGTCAATACCAACCCAANTACATATGCAAATAAGGGGTCTGAAGACTTTTGACTACAGAGTTCATCATCTTCACTGAAGAAAGTAGGGTCTGAAGTAAGGGGATTAGGAAACTGAACGCTGCCAACAATGAAGGCTTCATTTTTGCTAGTATCAGGGCTTATTTGCGATCCACTAAGAAGGTCAATCATATCGAATTTATTCGGCCAAATAAAAAGAAGGCGATTACCAGTAGGTGACATTGAGATTTTATTTGCTTCATTTGCCAGATTTTTCAGTCTAACAGCATAAGCCTGTCGACCACGAAGAAGATTCCATACACGAAACGTTTTGTCTGCACTGATGGAGAAAAGGCAGCGGTTGGAAGGGTGCACTGCTATACTTTGGACTGACCCTTTATGGCGACGAATTTGACGAATACACTCCCAAGCCGATGGATGTGGGCATTTGATAAGTTTACCTCCCGGGGATTCGCAACGCCAAATACCAATACATCCATCATCACCAGCACTGAAAAAATGACAGTACGCCGAGTCATGTGGTTCTGTAATAAATTTGAGCTGTCTTATGGTCCCAACATGCATTTCGAGTGCACCTACACGAGTTTTTGTATGTACTGAAAATACCTGAATAATTTCATCGCTACTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD157575             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGAAAGTAGGGTCTGAAGTAAGGGGATTAGGAAACTGAACGCTGCCAACAATGAAGGCTTCATTTTTGCTAGTATCAGGGCTTATTTGCGATCCACTAAGAAGGTCAATCATATCGAATTTATTCGGCCAAATAAAAAGAAGGCGATTACCAGTAGGTGACATTGAGATTTTATTTGCTTCATTTGCCAGATTTTTCAGTCTANCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD157729             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTAGGAAACTGAACGCTGCCAACAATGAAGGCTTCATTTTTGCTAGTATCAGGGCTTATTTGCGATCCACTAAGAAGGTCAATCATATCGAATTTATTCGGCCAAATAAAAATAAGGCGATTACCAGTAGGTGACATTGAGATTTTATTTGCCTCATTTGCCAGATTTTTCAGTCTATCAGCATAAGCCTGTCGTCCACGAAGAAGATTCCATACACGAAACGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD170567             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGGCTTATTTGCGATCCACTAAGAAGGTCAATCATATCGAATTTATTCGGCCAAATAAAAAGAAGGCGATTACCAGTAGGTGACATTGAGATTTTATTTGCTTCATTTGCCAGATTTTTCAGTCTAACAGCATAAGCCTGTCGACCACGAAGAAGATTCCATACACGGAACGTTTAGTCTGCACTGATGGAGAAAAGGCAGCGGTTGGAAGGGTGCACTGCTATACTTTGGACTGACCCTTTATGGCGACGAATTTGACGAATACACTCCCAAGCCGATGGATGTGGGCATTTGATAAGTTTACCTCCCGGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL AI975200             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATATCGAATNTATTCGGCCAAAT ATAAGAAGGCGATTACCAGTAGGTGACATTGAGATTTTATTTGCTTCATTTGCCAGATTTTTCAGTCTAACAGCATAAGCCTGTCGACCACGAAGAAGATTCCATACACGAAACGTTTTGTCTGCACTGATGGAGAAAAGGCAGCGGTTGGAAGGGTGCACTGCTATACTTTGGACTGACCCTTTATGGCGACGAATTTGACGAATACACTCCCAAGCCGATGGATGTGGGCATTTGATAAGTTTACCTCCCGGGGATTCGCAACGCCAAATACCAATACATCCATCATCACCAGCACTGAAAAAATGACAGTACGCCGAGTCATGTGGTTCTGTAATAAATTTGAGCTGTCTTATGGTCCCAACATGCATTTCGAGTGCACCTACACGAGTTTTTGTATGTACTGAAAATACCTGAATAATTTCATCGCTACTTCCAGAAATAACCACATC                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD074548             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGACATTTTGATTTTATTTGCTTCACTTGCCAGATTTTTCAGTCTAACAGCATAAGCCTGTCGACCACGAAGAAGACTCCATACACGAAACGTTTTGTCTGCACTGATGGAAAAAAGGCAGCGGTTGGAAGGGTGCACTGCTATACTTTGGACTGACCCTTTATGGCGACGAATTTGACATCTCCNCTCCCAAGCCGATGGATGTGGGCATTATATAANTTTACCTCCCGGGGATTCGCAACCCCAAATACCAATACATCCATCATCACCAGCACTGAAAAAATGACAGTACGCCGAGTCATGTGGTTCTGTAATAAATTTGAGCTGTCTTATGGTCCCAACATGCATTTCGAGTGCACCTACACGAGTTTTTGTATGTACTGAAAATACCTG ATAATTTCATCGCTACTTTCAGAAAT ACCACATCATCCTTTGTANCTATGNGTGNGACTGGTGCAAGATGTGCTGNANGATCNATGAATATGGCCTTTAACAGTTTCCGACCACCCTTTTCAATAGTTTGATGGGGATTTTTTACCGCAAAACCCTCCCCTCTTTTGTCCACCAGAACCCCACCCAAAAACTTGGGCGCACTCAAAATGTTACCGGGGCCTGGTTTTAATTTCCGAAACTTTTTTGGGCAGGGCGAAAACCCCCTTAATTAACCAGATTTTTGGCTGGGCCACAGATTCCCTAAACCCTCCACCAAATTTGGGATCGGGGGGGAATCTCTCTCGGGCAATTTTGCCCGGGGGCCATTCCTTTAGGGGGGTATAAAACNAAAATTTTATATTTTTCTGGGAAAAATTTTTCCAAAAACCCAAAATAAGGGGGAAAAAAAAAA]
[+] EMBL CD127839             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATTTTATTTGCTTCATTTGCCAGATTTTTCAGTCTAACAGCATAAGCCTGTCGACCACGAAGAAGATTCCATACACGAAACGTTTTGTCTGCACTGATGGAGAAAAGGCAGCGGTTGGAAGGGTGCACTGCTATACTTTGGACTGACCCTTTATGGCGACGAATTTGACGAATACACTCCCAAGCCGATGGATGTGGGCATTTGATAAGTTTACCTCCCGGGGATTCGCAACGCCAAATACCAATACATCCATCATCACCAGCACTGAAAAAATGACAGTACGCCGAGTCATGTGGTTCTGTAATAAATTTGAGCTGTCTTATGGTCCCAACATGCATTTCGAGTGCACCTACACGAGTTTTTGTATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_10626#0
AATGACATGATTTTATTTACATATTAAATTTACAGGTAGATATAATTCAAAATCGATTTC
GCTAGGGAGTAGTTTTGTCTTCATACTTCCGGATGATGCATGTGACTAGTTGAAGTCCAA
ATGGCGGCTAGGGTGGTAATTCGAGTGCTTGGGACGTCATATGTGAACAAAGGGATGAAT
GAACTTCCTGGCTCAAGGATGTCTGTCGAGTTGAAATTTACAGCATAACCTCGTAAATGG
CTACCATCAGCGTCTGTCGTAACAACTACTACCAACCGACTACGTCCACAGCACATTGGT
TCTTTTTCTGCCAAATAGGATGGCCAGTGTAAAACCTGAATGAATTTGATTCGTTTACCC
GGCAAAAGTACTTTGCTTGTAATTTTAGGTGTCAATGGCTCAGACGTGTTATTTCGGACG
TTGAATTTAATCAAAGTGAGTGATGCGTCAATACCAACCAATACATATGCAAATAAGGGG
TCTGAAGACTTTTGACTACAGAGTTCATCATCTTCACTGAAGAAAGTAGGGTCTGAAGTA
AGGGGATTAGGAAACTGAACGCTGCCAACAATGAAGGCTTCATTTTTGCTAGTATCAGGG
CTTATTTGCGATCCACTAAGAAGGTCAATCATATCGAATTTATTCGGCCAAATAAAAAGA
AGGCGATTACCAGTAGGTGACATTGAGATTTTATTTGCTTCATTTGCCAGATTTTTCAGT
CTAACAGCATAAGCCTGTCGACCACGAAGAAGATTCCATACACGAAACGTTTTGTCTGCA
CTGATGGAGAAAAGGCAGCGGTTGGAAGGGTGCACTGCTATACTTTGGACTGACCCTTTA
TGGCGACGAATTTGACGAATACACTCCCAAGCCGATGGATGTGGGCATTTGATAAGTTTA
CCTCCCGGGGATTCGCAACGCCAAATACCAATACATCCATCATCACCAGCACTGAAAAAA
TGACAGTACGCCGAGTCATGTGGTTCTGTAATAAATTTGAGCTGTCTTATGGTCCCAACA
TGCATTTCGAGTGCACCTACACGAGTTTTTGTATGTACTGAAAATACCTGAATAATTTCA
TCGCTACTTCCAGAAATACCACATCATCCTTTGTANCTATGNGTGNGACTGGTGCAAGAT
GTGCTGNANGATCNATGAATATGGCCTTTAACAGTTTCCGACCACCCTTTTCAATAGTTT
GATGGGGATTTTTTACCGCAAAACCCTCCCCTCTTTTGTCCACCAGAACCCCACCCAAAA
ACTTGGGCGCACTCAAAATGTTACCGGGGCCTGGTTTTAATTTCCGAAACTTTTTTGGGC
AGGGCGAAAACCCCCTTAATTAACCAGATTTTTGGCTGGGCCACAGATTCCCTAAACCCT
CCACCAAATTTGGGATCGGGGGGGAATCTCTCTCGGGCAATTTTGCCCGGGGGCCATTCC
TTTAGGGGGGTATAAAACNAAAATTTTATATTTTTCTGGGAAAAATTTTTCCAAAAACCC
AAAATAAGGGGGAAAAAAAAAA

consensusID : consensus_10626#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 770
fasta sequence 
                              [ACATGAGATTTATTGCTTCATTGCCAGATTTTCAGTCTAACAGCATAAGCCTGTCGACCACGAAGAAGATTCCATACACGAAACGTTTTGTCTGCACTGATGGAGAAAAGGCAGCGGTTGGAAGGGTGCACTGCTATACTTTGGACTGACCCTTTATGGCGACGAATTTGACGAATACACTCCCAAGCCGATGGATGTGGGCATTTGATAAGTTTACCTCCCGGGGATTCGCAACGCCAAATACCAATACATCCATCATCACCAGCACTGAAAAAATGACAGTACGCCGAGTCATGTGGTTCTGTAATAAATTTGAGCTGTCTTATGGTCCCAACATGCATTTCGAGTGCACCTACACGAGTTTTTGTATGTACTGAAAATACCTGAATAATTTCATCGCTACTTCCAGAAATAACCACATCATCCTTTGTAGCTATTGTTGTGACTGGTGCAGGATGTGCTGTAGGATCGATGAATATTGGCTTTAACAGTTTCGGACCAGCAGTATCAATAGTATGATGGGGATATTTTAACGCAAAAACACTACCATCATATGTACCACAAGACACCAACACAGAAAACATGGTGCAACTTCAAAATGTTAACGGGCTTGTATTTAATCT-CCCGATACGTTATTTGGCAGTGCGGAAGACGCGCTTTAGTTTAGCAGCGATATATTGCTTGGTCGACGAGAGTACAATAAAAACATACGAACAAAAATTAGGATACAGTCAGGCGATTCACTCCTCGTGCCAATTNTGGCCCTCGAG]

[-] EMBL CD080637             [ACATGAGATTTATTGCTTCATTGCCAGATTTTCAGTCTAACAGCATAAGCCTGTCGACCACGAAGAAGATTCCATACACGAAACGTTTTGTCTGCACTGATGGAGAAAAGGCAGCGGTTGGAAGGGTGCACTGCTATACTTTGGACTGACCCTTTATGGCGACGAATTTGACGAATACACTCCCAAGCCGATGGATGTGGGCATTTGATAAGTTTACCTCCCGGGGATTCGCAACGCCAAATACCAATACATCCATCATCACCAGCACTGAAAAAATGACAGTACGCCGAGTCATGTGGTTCTGTAATAAATTTGAGCTGTCTTATGGTCCCAACATGCATTTCGAGTGCACCTACACGAGTTTTTGTATGTACTGAAAATACCTGAATAATTTCATCGCTACTTCCAGAAATAACCACATCATCCTTTGTAGCTATTGTTGTGACTGGTGCAGGATGTGCTGTAGGATCGATGAATATTGGCTTTAACAGTTTCGGACCAGCAGTATCAATAGTATGATGGGGATATTTTAACGCAAAAACACTACCATCATATGTACCACAAGACACCAACACAGAAAACATGGTGCAACTTCAAAATGTTAACGGGCTTGTATTTAATCT CCCGATACGTTATTTGGCAGTGCGGAAGACGCGCTTTAGTTTAGCAGCGATATATTGCTTGGTCGACGAGAGTACAATAAAAACATACGAACAAAAATTAGGATACAGTCAGGCGATTCACTCCTCGTGCCAATTNTGGCCCTCGAG]
[-] EMBL CD114185             [                                                                                         tttTGCACAGATGGAGAAAAGGCAGCGGTTGGAAGGGTGCACTGCTATACTTTGGACTGACCCTTTATGGCGACGAATTTGACGAATACACTCCCAAGCCGATGGATGTGGGCATTTGATAAGTTGACCTCCCGGGGATTCGCAACGCCAAATACCAATACATCCATCATCACCAGCACTGAAAAAATGACAGTACGCCGAGTCATGTGGTTCTGTAATAAATTTGAGCTGTCTTATGGTCCCAACATGCATTTCGAGTGCACCTACACGAGTTTTTGTATGTACTGAAAATACCTGAATAATTTCATCGCTACTTCCAGAAATAACCACATCATCCTTTGTAGCTATTGTTGTGACTGGTGCAGGATGTGCTGTAGGATCGATGAATATTGGCTTTAACAGTTTCGGACCAGCGGTATCAATAGTATGATGGGGATATTTTAACGCAAAAACACTACCATCATATGTACCACAAGACACCAACACAGAAAACATGGTGCAACTTCAAAATGTTAACGGGCTTGTATTTAATCT CCCGATACGTTACTTGGCTGTGCAAAAG                                                                                                                       ]
[-] EMBL CD113586             [                                                                                                                                                                                                                                                                                        AGTACGCCGAGTCATGTGGTTCTGTAATAAATTTGAGCTGTCTTATGGTCCCGACATGCATTTCGAGTGCACGTACACGAGTTTTTGTATGTACTGAAAATACCTGAATAATTTCATCGCTACTTCCAGAAATAACCACATCATCCTTTGTAGCTATTGTTGTGACTGGTGCAGGATGTGCTGTAGGATCGATGAATATTGGCTTTAACAGTTTCGGCCCAGCAGTATCAATAGTATGATGGGGATATTTTAACGCAAAAACACTTCCATCATATGTACCACAAGCCGCCAACACAGAAATCATGGTGCAGCTTCAGAATGTTAACGGGCTTGTATTTAATCTGCCCGATAC                                                                                                                                           ]
[-] EMBL CD113636             [                                                                                                                                                                                                                                                                                        AGTACGCCGAGTCATGTGGTTCTGTAATAAATTTGAGCTGTCTTATGGTCCCAACATGCATTTCGAGTGCACCTACACGAGTTTTTGTATGTACTGAAAATACCTGAATAATTTCATCGCTACTTCCAGAAATAACCACATCATCCTTTGTAGCTATTGTTGTGACTGGTGCAGGATGTGCTGTAGGATCGATGAATATTGGCTTTAACAGTTTCGGACCAGCAGTATCAATAGTATGATGGGGATATTTTAACGCAAAAACACTACCATCATATGTACCACAAGACACCAACACAGAAAACATGGTGCAACTTCAAAATGTTAACGGGCTTGTATTTAATCT CCCGATA                                                                                                                                            ]




>consensus_10626#1
ACATGAGATTTATTGCTTCATTGCCAGATTTTCAGTCTAACAGCATAAGCCTGTCGACCA
CGAAGAAGATTCCATACACGAAACGTTTTGTCTGCACTGATGGAGAAAAGGCAGCGGTTG
GAAGGGTGCACTGCTATACTTTGGACTGACCCTTTATGGCGACGAATTTGACGAATACAC
TCCCAAGCCGATGGATGTGGGCATTTGATAAGTTTACCTCCCGGGGATTCGCAACGCCAA
ATACCAATACATCCATCATCACCAGCACTGAAAAAATGACAGTACGCCGAGTCATGTGGT
TCTGTAATAAATTTGAGCTGTCTTATGGTCCCAACATGCATTTCGAGTGCACCTACACGA
GTTTTTGTATGTACTGAAAATACCTGAATAATTTCATCGCTACTTCCAGAAATAACCACA
TCATCCTTTGTAGCTATTGTTGTGACTGGTGCAGGATGTGCTGTAGGATCGATGAATATT
GGCTTTAACAGTTTCGGACCAGCAGTATCAATAGTATGATGGGGATATTTTAACGCAAAA
ACACTACCATCATATGTACCACAAGACACCAACACAGAAAACATGGTGCAACTTCAAAAT
GTTAACGGGCTTGTATTTAATCTCCCGATACGTTATTTGGCAGTGCGGAAGACGCGCTTT
AGTTTAGCAGCGATATATTGCTTGGTCGACGAGAGTACAATAAAAACATACGAACAAAAA
TTAGGATACAGTCAGGCGATTCACTCCTCGTGCCAATTNTGGCCCTCGAG

consensusID : consensus_10626#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 456
fasta sequence 
                              [TGAAAATACCTGAATAATTTCATCGCTACTTCCAGAAATAACCACATCATCCTTTGTAGCTATTGTTGTGACTGGTGCAGGATGTGCTGTAGGATCGATGAATATTGGCTTTAACAGTTTCGGACCAGCAGTATCAATAGTATGATGGGGATATTTTAACGCAAAAACACTACCATCATATGTACCACAAGACACCAACACAGAAAACATGGTGCAACTTCAAAATGTTAACGGGCTTGTATTTAATCTCCCGATACGTTATTTGGCAGTGCGGAAGACGCGCTTTAGTTTAGCAGCGATATATTGCTTGGTCGACGAGAGTACAATAAAAACATACGAACAAAAATTAGGATACAGTCAGGCGATTCACTGACTCCTTAAAATGTATAAGTAAACTCGAAGGTGGATCACAAAGAACGTCCAACTCTCCTACACAGAAAGCCACGCTAAAGAAAC]

[-] EMBL CD147364             [TGAAAATACCTGAATAATTTCATCGCTACTTCCAGAAATAACCACATCATCCTTTGTAGCTATTGTTGTGACTGGTGCAGGATGTGCTGTAGGATCGATGAATATTGGCTTTAACAGTTTCGGACCAGCAGTATCAATAGTATGATGGGGATATTTTAACGCAAAAACACTACCATCATATGTACCACAAGACACCAACACAGAAAACATGGTGCAACTTCAAAATGTTAACGGGCTTGTATTTAATCTCCCGATACGTTATTTGGCAGTGCGGAAGACGCGCTTTAGTTTAGCAGCGATATATTGCTTGGTCGACGAGAGTACAATAAAAACATACGAACAAAAATTAGGATACAGTCAGGCGATTCACTGACTCCTTAAAATGTATAAGTAAACTCGAAGGTGGATCACAAAGAACGTCCAACTCTCCTACACAGAAAGCCACGCTAAAGAAAC]
[+] EMBL CD116631             [                                                                                                        TTGGCTTTAACAGTTTCGGACCAGCAGTATCAATAGTATGATGGGGATATTTTAACGCAAAAACACTACCATCATATGTACCACAAGACACCAACACAGAAAACATGGTGCAACTTCAAAATGTTAACGGGCTTGTATTTAATCTCCCGATACGTTATTTGGCAGTGCGGAAGACGCGCTTTAGTTTAGCAGCGATATATTGCTTGGTTGACGAGAGTACAAT                                                                                                                                 ]
[+] EMBL CD117173             [                                                                                                        TTGGCTTTAACAGTTTCGGACCAGCAGTATCAATAGTATGATGGGGATATTTTAACGCAAAAACACTACCATCATATGTACCACAAGACACCAACACAGAAAACATGGTGCAACTTCAAAATGTTAACGGGCTTGTATTTAATCTCCCGATACGTTATTTGGCAGTGCGGAAGACGCGCTTTAGTTTAGCAGCGATATATTGCTTGGTCGACGAGAGTACAAT                                                                                                                                 ]




>consensus_10626#2
TGAAAATACCTGAATAATTTCATCGCTACTTCCAGAAATAACCACATCATCCTTTGTAGC
TATTGTTGTGACTGGTGCAGGATGTGCTGTAGGATCGATGAATATTGGCTTTAACAGTTT
CGGACCAGCAGTATCAATAGTATGATGGGGATATTTTAACGCAAAAACACTACCATCATA
TGTACCACAAGACACCAACACAGAAAACATGGTGCAACTTCAAAATGTTAACGGGCTTGT
ATTTAATCTCCCGATACGTTATTTGGCAGTGCGGAAGACGCGCTTTAGTTTAGCAGCGAT
ATATTGCTTGGTCGACGAGAGTACAATAAAAACATACGAACAAAAATTAGGATACAGTCA
GGCGATTCACTGACTCCTTAAAATGTATAAGTAAACTCGAAGGTGGATCACAAAGAACGT
CCAACTCTCCTACACAGAAAGCCACGCTAAAGAAAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10626#0      AATGACATGATTTTATTTACATATTAAATTTACAGGTAGATATAATTCAAAATCGATTTC 60
consensus_10626#1      ------------------------------------------------------------
consensus_10626#2      ------------------------------------------------------------
                                                                                   

consensus_10626#0      GCTAGGGAGTAGTTTTGTCTTCATACTTCCGGATGATGCATGTGACTAGTTGAAGTCCAA 120
consensus_10626#1      ------------------------------------------------------------
consensus_10626#2      ------------------------------------------------------------
                                                                                   

consensus_10626#0      ATGGCGGCTAGGGTGGTAATTCGAGTGCTTGGGACGTCATATGTGAACAAAGGGATGAAT 180
consensus_10626#1      ------------------------------------------------------------
consensus_10626#2      ------------------------------------------------------------
                                                                                   

consensus_10626#0      GAACTTCCTGGCTCAAGGATGTCTGTCGAGTTGAAATTTACAGCATAACCTCGTAAATGG 240
consensus_10626#1      ------------------------------------------------------------
consensus_10626#2      ------------------------------------------------------------
                                                                                   

consensus_10626#0      CTACCATCAGCGTCTGTCGTAACAACTACTACCAACCGACTACGTCCACAGCACATTGGT 300
consensus_10626#1      ------------------------------------------------------------
consensus_10626#2      ------------------------------------------------------------
                                                                                   

consensus_10626#0      TCTTTTTCTGCCAAATAGGATGGCCAGTGTAAAACCTGAATGAATTTGATTCGTTTACCC 360
consensus_10626#1      ------------------------------------------------------------
consensus_10626#2      ------------------------------------------------------------
                                                                                   

consensus_10626#0      GGCAAAAGTACTTTGCTTGTAATTTTAGGTGTCAATGGCTCAGACGTGTTATTTCGGACG 420
consensus_10626#1      ------------------------------------------------------------
consensus_10626#2      ------------------------------------------------------------
                                                                                   

consensus_10626#0      TTGAATTTAATCAAAGTGAGTGATGCGTCAATACCAACCAATACATATGCAAATAAGGGG 480
consensus_10626#1      ------------------------------------------------------------
consensus_10626#2      ------------------------------------------------------------
                                                                                   

consensus_10626#0      TCTGAAGACTTTTGACTACAGAGTTCATCATCTTCACTGAAGAAAGTAGGGTCTGAAGTA 540
consensus_10626#1      ------------------------------------------------------------
consensus_10626#2      ------------------------------------------------------------
                                                                                   

consensus_10626#0      AGGGGATTAGGAAACTGAACGCTGCCAACAATGAAGGCTTCATTTTTGCTAGTATCAGGG 600
consensus_10626#1      ------------------------------------------------------------
consensus_10626#2      ------------------------------------------------------------
                                                                                   

consensus_10626#0      CTTATTTGCGATCCACTAAGAAGGTCAATCATATCGAATTTATTCGGCCAAATAAAAAGA 660
consensus_10626#1      ------------------------------------------------------------
consensus_10626#2      ------------------------------------------------------------
                                                                                   

consensus_10626#0      AGGCGATTACCAGTAGGTGACATTGAGATTTTATTTGCTTCATTTGCCAGATTTTTCAGT 720
consensus_10626#1      -------------------ACAT-GAGATTTA--TTGCTTCATT-GCCAGATTTT-CAGT 36
consensus_10626#2      ------------------------------------------------------------
                                                                                   

consensus_10626#0      CTAACAGCATAAGCCTGTCGACCACGAAGAAGATTCCATACACGAAACGTTTTGTCTGCA 780
consensus_10626#1      CTAACAGCATAAGCCTGTCGACCACGAAGAAGATTCCATACACGAAACGTTTTGTCTGCA 96
consensus_10626#2      ------------------------------------------------------------
                                                                                   

consensus_10626#0      CTGATGGAGAAAAGGCAGCGGTTGGAAGGGTGCACTGCTATACTTTGGACTGACCCTTTA 840
consensus_10626#1      CTGATGGAGAAAAGGCAGCGGTTGGAAGGGTGCACTGCTATACTTTGGACTGACCCTTTA 156
consensus_10626#2      ------------------------------------------------------------
                                                                                   

consensus_10626#0      TGGCGACGAATTTGACGAATACACTCCCAAGCCGATGGATGTGGGCATTTGATAAGTTTA 900
consensus_10626#1      TGGCGACGAATTTGACGAATACACTCCCAAGCCGATGGATGTGGGCATTTGATAAGTTTA 216
consensus_10626#2      ------------------------------------------------------------
                                                                                   

consensus_10626#0      CCTCCCGGGGATTCGCAACGCCAAATACCAATACATCCATCATCACCAGCACTGAAAAAA 960
consensus_10626#1      CCTCCCGGGGATTCGCAACGCCAAATACCAATACATCCATCATCACCAGCACTGAAAAAA 276
consensus_10626#2      ------------------------------------------------------------
                                                                                   

consensus_10626#0      TGACAGTACGCCGAGTCATGTGGTTCTGTAATAAATTTGAGCTGTCTTATGGTCCCAACA 1020
consensus_10626#1      TGACAGTACGCCGAGTCATGTGGTTCTGTAATAAATTTGAGCTGTCTTATGGTCCCAACA 336
consensus_10626#2      ------------------------------------------------------------
                                                                                   

consensus_10626#0      TGCATTTCGAGTGCACCTACACGAGTTTTTGTATGTACTGAAAATACCTGAATAATTTCA 1080
consensus_10626#1      TGCATTTCGAGTGCACCTACACGAGTTTTTGTATGTACTGAAAATACCTGAATAATTTCA 396
consensus_10626#2      --------------------------------------TGAAAATACCTGAATAATTTCA 22
                                                             **********************

consensus_10626#0      TCGCTACTTCCAGAAATA-CCACATCATCCTTTGTANCTATGNGTGNGACTGGTGCAAGA 1139
consensus_10626#1      TCGCTACTTCCAGAAATAACCACATCATCCTTTGTAGCTATTGTTGTGACTGGTGCAGGA 456
consensus_10626#2      TCGCTACTTCCAGAAATAACCACATCATCCTTTGTAGCTATTGTTGTGACTGGTGCAGGA 82
                       ****************** ***************** ****   ** ********** **

consensus_10626#0      TGTGCTGNANGATCNATGAATATGGCCTTTAACAGTTTCCGACCACCCTTTTCAATAGTT 1199
consensus_10626#1      TGTGCTGTAGGATCGATGAATATTGGCTTTAACAGTTTCGGACCAGCAGTATCAATAGTA 516
consensus_10626#2      TGTGCTGTAGGATCGATGAATATTGGCTTTAACAGTTTCGGACCAGCAGTATCAATAGTA 142
                       ******* * **** ******** * ************* ***** *  * ******** 

consensus_10626#0      TGATGGGGATTTTTTACCGCAAAACC-CTCCCCTCTTTTGT-CCACCAGAACCCCACCCA 1257
consensus_10626#1      TGATGGGGATATTTTAACGCAAAAACACTACCATCATATGTACCACAAGACACCAACACA 576
consensus_10626#2      TGATGGGGATATTTTAACGCAAAAACACTACCATCATATGTACCACAAGACACCAACACA 202
                       ********** ***** ******* * ** ** ** * *** **** ***  ** ** **

consensus_10626#0      AAAACTTGGGCGCA--CTCAAAATGTTACCGGGGCCTGGTTTTAATTTCCGAAACTTTTT 1315
consensus_10626#1      GAAAACATGGTGCAACTTCAAAATGTTAACGGGCTTGTATTTAATCTCCCGATACGTTAT 636
consensus_10626#2      GAAAACATGGTGCAACTTCAAAATGTTAACGGGCTTGTATTTAATCTCCCGATACGTTAT 262
                        ***    ** ***   *********** ****      *** *  * **** ** ** *

consensus_10626#0      TGGGCAGGGCGAAAACCCC--CTTAATTAACCAG--ATTTTTGGCTGGGCCACAGATTCC 1371
consensus_10626#1      TTGGCAGTGCGGAAGACGCGCTTTAGTTTAGCAGCGATATATTGCTTGGTCGACGAGAGT 696
consensus_10626#2      TTGGCAGTGCGGAAGACGCGCTTTAGTTTAGCAGCGATATATTGCTTGGTCGACGAGAGT 322
                       * ***** *** **  * *   *** ** * ***  ** * * *** ** *   **    

consensus_10626#0      CTAAACCCTCCACCAAATTTGGGATCGGGGGGGAATCTCTCTCGGGCAATTTTGCCCGGG 1431
consensus_10626#1      ACAATAAAAACATACGAACAAAAATTAGGATACAGTC------AGGCGATTCACTCCTCG 750
consensus_10626#2      ACAATAAAAACATACGAACAAAAATTAGGATACAGTC------AGGCGATTC-------- 368
                         **      **    *      **  **    * **       *** ***         

consensus_10626#0      GGCCATTCCTTTAGGGGGGTATAAAACNAAAATTTTATATTTTTCTGGGAAAAATTTTTC 1491
consensus_10626#1      TGCCAATTNT------GGCCCTCGAG---------------------------------- 770
consensus_10626#2      ACTGACTCCTT----AAAATGTATAAGTAAACTCGAAGGTGGATCACAAAGAACGTCCAA 424
                           * *  *           *  *                                   

consensus_10626#0      CAAAAACCCAAAATAAGGGGGAAAAAAAAAA- 1522
consensus_10626#1      --------------------------------
consensus_10626#2      CTCTCCTACACAGAAAGCCACGCTAAAGAAAC 456


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)