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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10659#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1672 fasta sequence
[CAGGTATTATGGCTGAATTGCTTACAATAGAAAACAAGTGGGATTAGAATAGTCTAAAGGTTCACTCTACACCAGAAGGAATGATGGTAAAAGATAAGAATCGTCCTAAACCACCGATGACACCATATGCATGTTTCGTGCAAGTAATACGTGAGGAGCAT-CGAAAAAAACATCCAACAGAGAATGTTATTTTCAGTGAATTTTCTAAGAAGTGCGCAGAAAAGTGGAAGCTCATGAATATGGAACAACGAAAGTGTTTCGAGGAAATGGCAAAATTAGATACGGAGAGATTCAATCGGGAAATGGCTCATTATATACCACCAGTTGGAATGAAGCGAGGTCGTAGACGGCGACGTATCAAAGATCCAAGTATGCCTAAACGTTCATGGTCTGCATTTTTCTTCTTTTGCGATGCATTTCGATCAAAGATTCGTAGTGAGCACCCCGATTGGAAGGTTAGTGATATCGCCAAGGAGTTAGGTAGACGATGGGAAGAGTGTTCCGATAAAGAGAAATACGAAAGACGCGCACAGAATGATAAATTGCGTTATGAACAAGATATGGAGAAATACAAAGCTGGATTGTATGTAGCGACCAAACGTGCTCGAGTTGGCGATCAGACAAAATCAAACGAGATACTGTCATGCTTACACGATCAGTCACATCATAAGGAGTTAGGTGAGGCAAGTCAAATTTCAAGTGATGAAGTAGGACGAGGTGATGGAGATGATGATGATGGAGATGAAGATGATGTCGATGATGATGACGATGACGACGACGATGATGAAGAAGAGGAGGAGGGTGATGGTGCAGAACAAGATGATGAAGATAATG---AACAACAACAACAACAACAACAATCAAACAGATCTAACACTCATGAAATGCCTGTTGGTAGTGATCACAAAACACCAGAACAAATTGTCTCCACTGATACAAGTAGTATTATTATAAACACAGGAAATTAGAATATATTATTTGTTTATGTAAATGTTTCTCTCTTACTCTTTATCATTTCATATATTATTGAAACATATATTTATCAGTGATTCTTTGCTGGTCATTTTTTTCTTCTTCTTTTCTATATTGATGGACTCAACAGATCCATCAATACAAATGCATTTATTCTTTTCCCATTGCTGACTCTCATTTATTTTATACTTTATACATTTGTTTTTGTTTCCTTAGTTTTATATCGATAGATGATTTTTTTTTAAGTGATGTCGTGTGGACCGACACAGGAAACACCTCAATCGCCAATATATATATATATATATA------ATACCTCTACTCATTTCTTACATCGCTTTGTTTTTATATATTAATTTGTAATTTTAATTTCACTATACGGTTGTCAGGTTAAGTTCTAATGGTACCATTTATCATAGCAACTATAATGATCATTATTATTTGACTCCTTATATTTTCATTAATTTTGCTTTGTTTTGTTAGGCATTTAACTTTCATCTAATTAATGAATATGCAATTGATTTATTATGATTGTTAAGATAGATATCTGTGGATAATAATTAAGTTTTCTGTATCTAGTTAGTTGAAAAATGTATCGCTTTTGATGGTAGTATCTATATGAAAATGTGTAACTTTTAAAGTCAAGTACAGCTTTATATGTTAATTAATAAACTATATGTATGGTGTCGAAGCAAGTAAAATATATCTA]
[+] EMBL CD079164 [CAGGTATTATGGCTGAATTGCTTACAATAGAAAACAAGTGGGATTAGAATAGTCTAAAGGTTCACTCTACACCAGAAGGAATGATGGTAAAAGATAAGAATCGTCCTAAACCACCGATGACACCATATGCATGTTTCGTGCAAGTAATACGTGAGGAGCAT CGAAAAAAACATCCAACAGAGAATGTTATTTTCAGTGAATTTTCTAAGAAGTGCGCAGAAAAGTGGAAGCTCATGAATATGGAACAACGAAAGTGTTTCGAGGAAATGGCAAAATTAGATACGGAGAGATTCAATCGGGAAATGGCTCATTATATACCACCAGTTGGAATGAAGCGAGGTCGTAGACGGCGACGTATCAAAGATCCAAGTATGCCTAAACGTTCATGGTCTGCATTTTTCTTCTTTTGCGATGCATTTCGATCAAAGATTCGTAGTGAGCACCCCGATTGGAAGGTTAGTGATATCGCCAAGGAGTTAGGTAGACGATGGGAAGAGTGTTCCGATAAAGAGAAATACGATAGACGCGCACAGAATGATAAATT ]
[+] EMBL CD188120 [ TTAGAATAGTCTAAAGGTTCACTCTACACCAGAAGGAATGATGGTAAAAGATAAGAATCGTCCTAAACCACCGATGACACCATATGCATGTTTCGTGCAAGTAATACGTGAGGAGCAT CGAAAAAAACATCCAATAGAGAATGTTATTTTCAGTGAATTTTCTAAGAAGTGCGCAGAAAAGTGGAAGCTCATGAATATGGAACAACGAAAGTGTTTCGAGGAAATGGCAAAATTAGATACGGAGAGATTCAATCGGGAAATGGCTCATTATATACCACCAGTTGGAATGAAGCGAGGTCGTAGACGGCGACGTATCAAAGATCCAAGTATGCCTAAACGTTCATGGTCTGCATTTTTCTTCTTTTGCGATGCATTTCGATCAAAGATTCGTAGTGAGCACCCCGATTGGAAGGTTAGTGATA ]
[+] EMBL CD062680 [ GTTCACTCTACACCAGAAGGAATGATGGTAAAAGATAAGAATCGTCCTAAACCACCGATGACACCATATGCATGTTTCGTGCAAGTAATACGTGAGGAGCAT CGAAAAAAACATCCAACAGAGAATGTTATTTTCAGTGAATTTTCTAAGAAGTGCGCAGAAAAGTGGAAGCTCATGAATATGGAACAACGAAAGTGTTTCGAGGAAATGG ]
[+] EMBL CD136979 [ GTAAAAGATAAGAATCGTCCTAAACCACCGATGACACCATATGCATGTTTCGTGCAAGTAATACGTGAGGAGCATNCGAAAAAAACATCCAACAGAGAATGTTATTTCCAGTGAATTTTCTAAGAAGTGCGCAGAAAAGTGGAAGCTCATGAATATGGAACAACGAAAGTGTTTCGAGGAAATGGCAAAATTAGATACGGAGAGATTCAATCGGGAAATGGCTCATTATATACCACCAGTTGGAATGAAGCGAGGTCGTAGACGGCGACGTATCAAAGATCCAAGTATGCCTAAACGTTCATGGTCTGCATTTTTCTTCTTTTGCGATGCATTTCGATCAAAGATTCGTAGTGAGCACCCCGATTGGAAGGTTAGTGATATCGCCAAGGAGTTAGGTAGACGATGGGAAGAGTGTTCCGATAAAGAGAAATACGAAAGACGCGCACAGAATGATAAATTGCGTT ]
[+] EMBL CD066280 [ TATTTTCAGTGAATTTTCTAAGAAGTGCGCAGAAAAGTGGAAGCTCATGAATATGGAACAACGAAAGTGTTTCGAGGAAATGGCAAAATTAGATACGGAGAGATTCAATCGGGAAATGGCTCATTATATACCACCAGTTGGAATGAAGCGAGGTCGTAGACGGCGACGTATCAAAGATCCAAGTATGCCTAAACGTTCATGGTCTGCATTTTTCTTCTTTTGCGATGCATTTCGATCAAAGATTCGTAGTGAGCACCCCGATTGGAAGGTTAGTGATATCGCCAAGGAGTTAGGTAGACGATGGGAAGAGTGTTCCGATAAAGAGAAATACGAAAGACGCGCACAGAATGATAAATTGCGTTATGAACAAGATATGGAGAAATACAAAGCTGGATTGTATGTAGCGACCAAACGTGCTCGAGTTGGCGATCAGACAAAATCAAACGAGATACTGTCATGCTTACACGATCAGTCACATCATAAGGAGTTAGGTGAGGCNAGTCAAATTTC AGTGATGAAGTANGACGAGGTGATGGAGATGATGATGATGGAGATGAANATGATGTCGATGATGATGACCATGACGACAACCATGATGAAGAA ]
[+] EMBL CD136876 [ ATTTTCAGTGAATTTTCTAAGAAGTGCGCAGAAAAGTGGAAGCTCATGAATATGGAACAACGAAAGTGTTTCGAGGAAATGGCAAAATTAGATACGGAGAGATTCAATCGGGAAATGGCTCATTATATACCACCAGTTGGAATGAAGCGAGGTCGTAGACGGCGACGTATCAAAGATCCAAGTATGCCTAAACGTTCATGGTCTGCATTTTTCTTCTTTTGCGATGCATTTCGATCAAAGATTCGTAGTGAGCACCCCGATTGGAAGGTTAGTGATATCGCCAAGGAGTTAGGTAGACGATGGGAAGAGTGTTCCGATAAAGAGAAATACGAAAGACGCGCACAGAATGA ]
[-] EMBL CD137184 [ TTTTCAGTGAATTTTCTAAGAAGTGCGCAGAAAAGTGGAAGCTCATGAATATGGAACAACGAAAGTGTTTCGAGGAAATGGCAAAATTAGATACGGAGAGATTCAATCGGGAAATGGCTCATTATATACCACCAGTTGGAATGAAGCGAGGTCGTAGACGGCGACGTATCAAAGATCCAAGTATGCCTAAACGTTCATGGTCTGCATTTTTCTTCTTTTGCGATGCATTTCGATCAAAGATTCGTAGTGAGCACCCCGATTGGAAGGTTAGTGATATCGCCAAGGAGTTAGGTAGACGATGGGAAGAGTGTTCCGATAAAGAGAAATACGAAAGACGCGCACAGAATGAT ]
[+] EMBL CD119606 [ CTAAGAAGTGCGCAGAAAAGTGGAAGCTCATGAATATGGAACAACGAAAGTGTTTCGAGGAAATGGCAAAATTAGATACGGAGAGATTCAATCGGGAAATGGCTCATTATATACCACCAGTTGGAATGAAGCGAGGTCGTAGACGGCGACGTATCAAAGATCCAAGTATGCCTAAACGTTCATGGTCTGCATTTTTCTTCTTTTGCGATGCATTTCGATCAAAGATTCGTAGTGAGCACCCCGATTGGAAGGTTAGTGATATCGCCA ]
[+] EMBL CD119616 [ CTAAGAAGTGCGCAGAAAAGTGGAAGCTCATGAATATGGAACAACGAAAGTGTTTCGAGGAAATGGCAAAATTAGATACGGAGAGATTCAATCGGGAAATGGCTCATTATATACCACCAGTTGGAATGAAGCGAGGTCGTAGACGGCGACGTATCAAAGATCCAAGTATGCCTAAACGTTCATGGTCTGCATTTTTCTTCTTTTGCGATGCATTTCGATCAAAGATTCGTAGTGAGCACCCCGATTGGAAGGTTAGTGATATCGCCA ]
[-] EMBL CD190118 [ GCGACGTATCAAAGATCCAAGTATGCCTAAACGTTCATGGTCTGCATTTTTCTTCTTNTGCGATGCATTTCGATCAAAGATTCGTAGTGAGCACCCCGATTGGAAGGTTAGTGATATCGCCAAGGAGTTAGGTAGACGATAGGAAGAGTGTTCCGATAAAGAGAAATACGAAAGACGCGCACAGAATGATAAATTGCGTTATGAACAAGATATGGAGAAATACAAAGCTGGATTGTATGTAGCGACCAAACGTGCTCGAGTTGGCGATCAGACAAAATCAAACGAGATACTGTCATGCTTACACGATCAGTCACATCATAAGGAGTTAGGTGAGGCAAGTCAAATTTCAAGTGATGAAGTAGGACGAGGTGATGGAGATGATGATGATGGAGATGAAGATGATGTCGATGATGATGACGATGACGACGACGATGATGAAGAAGAGGAGGAGG ]
[+] EMBL CD069939 [ TTAGGTAGACGATGGGAAGAGTGTTCCGATAAAGAGAAATACGAAAGACGCGCACAGAATGATAAATTGCGTTATGAACAAGATATGGAGAAATACAAAGCTGGATTGTATGTAGCGACCAAACGTGCTCGAGTTGGCGATCAGACAAAATCAAACGAGATACTGTCATGCTTACACGATCAGTCACATCATAAGGAGTTAGGTGAGGCAAGTCAAATTTCAAGTGATGAAGTAGGACGAGGTGATGG ]
[+] EMBL CD084228 [ cgaggAGATATGGAGAAATACAAAGCTGGA TGTATGTAGCGACCAAACGTGCTCGAGTTGGCGATCAGACAAAATCAAACGAGATACTGTCATGCTTACACGATCAGTCACATCATAAGGAGTTAGGTGAGGCAAGTCAAATTTCAAGTGATGAAGTAGGACGAGGTGATGGAGATGATGATGATGGAGATGAAGATGATGTCGATGATGATGACGATGACGACGACGATGATGAAGAAGAGGAGGAGGGTGATGGTGCAGAACAAGATGATGAAGATAATG AACAACAACAACAACAACAACAATCAAACAGATCTAACACTCATGAAATGCCTGTTGGTAGTGATCACAAAACACCAGAACAAATTGTCTCCACTGATACAAGTAGTATTATTATAAACACAGGAAATTAGAATATATTATTTGTTTATGTAAATGTTTCTCTCTTACTCTTTATCATTTCATATATTATTGAAACATATATTTATCAGTGATTCTTTGCTGGT ]
[-] EMBL BG931877 [ TCAGACAAAATCAAACGAGATACTGTCATGCCTACACGATCAGTCACATCATAAGGAGTTAGGTGAGGCAAGTCAAATTTCAAGTGATGAAGTAGGACGAGGTGATGGAGATGATGATGATGGAGATGAAGATGATGTCGATGATGATGACGATGACGACGACGATGATGAAGAAGAGGAGGAGGGTGATGGTGCAGAACAAGATGATGAAGATAATG AACAACAACAACAACAACAACAATCAAACAGAc ]
[+] EMBL CD192704 [ AAGTAGGACGAGGTGATGGAGATGATGATGATGGAGATGAAGATGATGTCGATGATGATGACGATGACGACGACGATGATGAAGAAGAGGAGGAGGGTGATGGTGCAGAACATGATGATGAAGATAATG AACAACAACAACAACAACAATCAAACAGATCTAACACTCATGAAATGCCTGTTGGTAGTGATCACAAAACACCAGAACAGATTGTCTCCACTGATACAAGTAGTATTATTATAAACACAGGAAATTAGAATATATTATTTGTTTATGTAAATGTTTCTCTCTTACTCTTTATCATTTCATATATTATTGAAACATATATTTATCAGTGATTCTTTGCTGGTCATTCTTTTCTTCTTCTTTTCTATATTGATAGACTCAACAGATCCATCAATACAAATGCATTTATTCTTTTCCCATTGCTGACTCTCATTTATTCTATACTGTATACATGTGTTTat ]
[-] EMBL CD198770 [ ccAGAAGAGGATGATGTCGATGATGATGACGATGACGACGACGATGATGAAGAAGAGGAGGAGGGTGATGTNGCAGACAAAGATGATGAAGATAATG AACAACAACAACAACAACAATCAAACAGATCTAACACTCATGAAATGCCTGTTGGTAGTGATCACAAAACACCAGAACAAATTGTCTCCACTGATACAAGTAGTATTATTATAAACACAGGAAATTAGAATATATTATTTGTTTATGTAAATGTTTCTCTCTTACTCTTTATCATTTCATATATTATTGAAACATATATTTATCAGTGATTCTTTGCTGGTCATTTTTTTCTTCTTCTTTTCTATATTGATAGACTCAACAGATCCATCAATACAAATGCAT ]
[+] EMBL CD192511 [ GATGAAGATGATGTCGATGATGATGACGATGACGACGACGATGATGAAGAAGAGGAGGAGGGTGATGGCGCAGAACAAGATGATGAAGATAATG AACAACAACAACAACAACAATCAAACAGATCTAACACTCATGAAATGCCTGTTGGTAGTGATCACAAAACACCAGAACAAATTGTCTCCACTGATACAAGTAGTATTATTATAAACACAGGAAATTAGAATATATTATTTGTTTATGTAAATGTTTCTCTCTTACTCTTTATCATTTCATATATTATTGAAACATATATTTATCAGTGATTCTTTGCTGGTCATTTTTTTCTTCTTCTTTTCTATATTGATGGACTCAACAGATCCATCAATACAAATGCATTTATTCTTTTCCCATTGCTGACTCTCATTTATTTTATACTTTATACATGTGATAATGGTTCCTTACGCATATATCG ]
[+] EMBL CD136756 [ AGATAATGAACAACAACAACAACAACAACAACAATCAAACAGATCTAACACTCATGAAATGCCTGTTGGTAGTGATCACAAAACACCAGAACAAATTGTCTCCACTGATACAAGTAGTATTATTATAAACACAGGAAATTAGAATATATTATTTGTTTATGTAAATGTTTCTCTCTTACTCTTTATCATTTCATATATTATTGAAACATATATTTATCAGTGATTCTTTGCTGGTCATTTTT TTCTTCTTTTCTATATTGATGGACTCAACAGATCCATCAATACAAATGCATTTATTCTTTTCCCATTGCTGACTCTCATTTATTTTATACTTTATACATTTGTTTTTGTTTCCTTAGTTTTATATCGATAGATGATTTTTTTTTAAGTGATGTCGTGTGGACCGACACAGGAAACACCTCAATCGCCAATATATATATATATATATA ATACCTCTACTCATTTCTTACATCGCTTTGTTTTTATATATTAATTTGTAATTTTAATTT ]
[+] EMBL CD192117 [ TTTTTCTTCTTTTCTATATTGATGGACTCAACAGATCCATCAATACAAATGCATTTATTCTTTTCCCATTGCTGACTCTCATTTATTTTATACTTTATACATTTGTTTTTGTTTCCTTAGTTTTATATCGATAGATGAT ]
[+] EMBL CD080834 [ GACTCAACAGATCCATCAATACAAATGCATTTATTCTTTTCCCATTGCTGACTCTCATTTATTTTATACTTTATACATTTGTTTTTGTTTCCTTAGTTTTATATCGATAGATGA TTTTTTTGAGTGATGTCGTGTGGACCGACACAGGAAACACCTCAATCGCCAATATATATATATATATATATATATTATACCTCTACTCATTTCTTACATCGCTTTGTTTTTATATATTAATTTCTAATTTTAATTTCACTATACGGTTGTCAGGTTAAGTTCTAATGGTACCATTTATCATAGCAACTATAATGATCATTATTATTTGACTCCTTATATTTTCATTAATTTTGCTTTGTTTTGTTAGGCATTTAACTTTCATCTAATTAATGAATATGCAATTGATTTATTATGATTGTTAAGATAGATATCTGTGGATAATAATTAAGTTTTCTGTATCTAGTTAGTTGAAAAATGTATCGCTTTTGATGGTAGTATCTATATGAAAATGTGTAACTTTTAAAGTCAAGTACAGCTTTATATGTTAATTAATAAACTATATGTATGGTGTCGAAGCAAGTAAAATATATCTA]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||