These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10664#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1001 fasta sequence [CGGAGCCATTAATTCGGCACGCCGTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGGTATGCAATATTTCTCAGCATTACGGTAAATTTTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATCATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCA----ACTTGTG-AAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGG-AAGTTTTGGTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACCCTTTCTTGAGAACTCTTTTTGTCTTCAGTAACTATCCGAATCTCATATGAAAATTTGTGTCAAAATCGCACATAAAATTATGATTTTCAATAAATCCATC] [+] EMBL CD081577 [CGGAGCCATTAATTCGGCACGCCGTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGGTATGCAATATTTCTCAGCATTACGGTAAATTTTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATCATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCA ACTTGTG AAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGG AAGTTTTGGTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACC ] [+] EMBL CD081711 [ TTAATTCGGCACGAGGTTTACACANAAACTGCTGCGAAATTTTGGAT TCATTCTGTTGCGGTGTTGCCTCAGGTATGCAATATTTCTCAGCATTACGGTAAATTTTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATCATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCA ACTTGTG AAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGG AAGTTTTGGTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACC ] [+] EMBL CD136411 [ ATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAA ] [+] EMBL AI977698 [ TGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGTTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTGCGCATTATATTTATCTA ] [-] EMBL CD090645 [ ATCCCTTACAGCAATTGGACTTTCTATTGCACTATGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTAGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTATACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTATCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAg ] [-] EMBL CD075403 [ GATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACCCTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATCATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCA ACTTGTGAAAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGG AAGTTTTGGTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACCC ] [-] EMBL CD074310 [ TTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATTATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCA ACTTGTGAAAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGG AAGTTTTGGTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACCCTTTCTTGAGAACTCTTTTTGTCTTCAGTAACTATCCGAATCTCATATGAAAATTTGTGTCAAAATCGCACATAAAATTATGATTTTCAATAAATCCATC] [-] EMBL CD075704 [ GTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATCATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCA ACTTGTGAAAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGG AAGTTTTGGTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACCCTTTCTTGAGAACTCTTTTTGTCTTCAGTAACTATCCGAATCTCATATGAAAATTTGTGTCAAAATCGCACATAAAATTATGATTTTCAATAAATCCATC] [-] EMBL CD074488 [ GTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATTATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCANNNNNCT TG AAAAAAAATTTATTAATCCGTTCCTAATTGTTTTGAGGNAAAATTT GTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACCCTTTCTTGAGAACTCTTTTTGTCTTCAGTAACTATCCGAATCTCATATGAAAATTTGTGTCAAAATCGCACATAAAATTATGATTTTCAATAAATCCATC] consensusID : consensus_10664#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 920 fasta sequence [CTCGAGGCCAGAATTTGGCACGAGGCAGCTGATCCCAAGGTTGTAGTTAATCGCGCGATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCANAGAANAGTCAAATAATTTCCAATCCCTAA-ATCCCATACTACTTAGANACTCGATTTCAAAAACACTGTACATANAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTNTATTTATCTATAAGCTTATTTATACGTCGNTACTTTTTGGGGTTNNNCTTGTTGTACTCTGAGTGCAGTTAATTTATCATTACATCACTATACTAGCTACAACGTAGTCTCATTTGACTATTGTACCACTGGGAAATTA] [+] EMBL CD080852 [CTCGAGGCCAGAATTTGGCACGAGGCACCTGATCCCAAGGTTGTAGTTAATCGCGCGATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGAC ATTAGCGAAACCTGATGTTATGGCGCTAATGCANAGAANAGTCAAATAATTTCCAATCCCTAA ATCCCATACTACTTAGANACTCGATTTCAAAAACACTGTACATANAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTNTATTTATCTATAAGCTTATTTATACGTCGNTACTTTTTGGGGTTNNNCTTGTTGTACTCTGAGTGCAGTTAATTTATCATTACATCACTATACTAGCTACAACGTAGTCTCATTTGACTATTGTACCACTGGGAAATTA] [-] EMBL CD092874 [ gaaatCAGCTGATCNCAAGGTTGTAGTTAATCGCGCGATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTC ] [+] EMBL CD111124 [ GCTGATCCCAAGGTTGTAGTTAATCGCGCGATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTATGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTGTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTA TTGACAGATCT ] [+] EMBL CD082089 [ aggacTCCCAA GTTGTAGTTAATCGCGCGATGGTTCTGCTTTTACAAACGACGCAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCANAGAAAAGTCAAATAATTTCCAATCC ] [+] EMBL CD164918 [ TCGCGCGATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCAGTGTTCTGCTCT ] [+] EMBL CD164976 [ TCGCGCGATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCCTTTTCCTGGGCATATGTTTTCGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTNAACTTGGTGCCTATGA ] [+] EMBL CD162730 [ GCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCATCCATGCAACCGCTAa ] [+] EMBL CD080395 [ TACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCANAGAANAGTCAAATAATTTCCAAT CCTAANATCCCATACTACTTAGAAAC ] [-] EMBL CD111534 [ ATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGT ] consensusID : consensus_10664#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 279 fasta sequence [CGCGGCCAAAAATTCGGTCCGAGGTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAG] [+] EMBL CD077931 [CGCGGCCAAAAATTCGGTCCGAGGTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10664#1 ------------------------------------------------------------ consensus_10664#2 ------------------------------------------------------------ consensus_10664#0 CGGAGCCATTAATTCGGCACGCCGTTTACACAGAAACTGCTGCGAAATTTTGGATATCAT 60 consensus_10664#1 ------------------------------------------------------------ consensus_10664#2 ------------------------------------------------------------ consensus_10664#0 TCTGTTGCGGTGTTGCCTCAGGTATGCAATATTTCTCAGCATTACGGTAAATTTTCAGTC 120 consensus_10664#1 ------------------------------------------------------------ consensus_10664#2 ------------------------------------------------------------ consensus_10664#0 ACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAAT 180 consensus_10664#1 ----CTCGAGGCCAGAATTTGGCACGAGGCAGCTGATCCCAAGGTTGTAGTTAATCGCGC 56 consensus_10664#2 ---------------------------------------------CGCGGCCAAAAATTC 15 consensus_10664#0 AAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACC 240 * * * consensus_10664#1 GATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCT 116 consensus_10664#2 GGT----CCGAGGTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCT 71 consensus_10664#0 GCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATT 300 * * * ** * * ** * * * ** * * * * * consensus_10664#1 -CTTTTTCCTGGGCATATG------TTTTTGTTGGGCTT--CCGAAGCACTACA-TAACA 166 consensus_10664#2 -CTTTTTCCTGGGCATATG------TTTTTGTTGGGCTT--CCGAAGCACTACA-TAACA 121 consensus_10664#0 GCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCA 360 * *** **** ** ** * ******* ** * * * ** * ** consensus_10664#1 TAAGAGGAGAATTCACGGCTTCAAAAATATCATT--------TTACACAGAAACTGCTGC 218 consensus_10664#2 TAAGAGGAGAATTCACGGCTTCAAAAATATCATT--------TTACACAGAAACTGCTGC 173 consensus_10664#0 TTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCAC 420 * * * * * ***** ** * ** * ***** * * consensus_10664#1 GAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCC 278 consensus_10664#2 GAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCC 233 consensus_10664#0 CCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTG 480 ** *** * ** * ** * ** * ** * ** ** consensus_10664#1 ATGCGTTGACTCT-----AAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCA 333 consensus_10664#2 ATGCGTTGACTCT-----AAACTTGGTGCCTATGATGCTTATAATAAGGAG--------- 279 consensus_10664#0 GTTGGCCGACAATTAGCGAAACCTGATGT-TATGGCGCTAATGCAAAGAAAAGTCAAATA 539 * * *** * **** ** ** **** *** ** *** * consensus_10664#1 GTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTT 393 consensus_10664#2 ------------------------------------------------------------ consensus_10664#0 ATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAA 599 consensus_10664#1 GCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTA 453 consensus_10664#2 ------------------------------------------------------------ consensus_10664#0 AAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCT 659 consensus_10664#1 TTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTT 513 consensus_10664#2 ------------------------------------------------------------ consensus_10664#0 TATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTA 719 consensus_10664#1 ATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCT 573 consensus_10664#2 ------------------------------------------------------------ consensus_10664#0 TCATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGT 779 consensus_10664#1 TGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTA 633 consensus_10664#2 ------------------------------------------------------------ consensus_10664#0 AACCAACTTGTGAAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGGAAGTTTTGGT 839 consensus_10664#1 GCGAAACCTGATGTTATGGCGCTAATGCANAGAANAGTCAAATAATTTCCAATCCCTAAA 693 consensus_10664#2 ------------------------------------------------------------ consensus_10664#0 AGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAA 899 consensus_10664#1 TCCCATACTACTTAGANACTCGATTTCAAAAACACTGTACATANAAATCAAACATGTATA 753 consensus_10664#2 ------------------------------------------------------------ consensus_10664#0 CCCTTTCTTGAGAACTCTTTTTGTCTTCAGTAACTATCCGAATCTCATATGAAAATTTGT 959 consensus_10664#1 GAAAAAATTAGTTCTTCCGTATGCATTNTATTTATCTATAAGCTTATTTATACGTCGNTA 813 consensus_10664#2 ------------------------------------------------------------ consensus_10664#0 GTCAAAATCGCACATAAAATTATGATTTTCAATAAATCCATC------------------ 1001 consensus_10664#1 CTTTTTGGGGTTNNNCTTGTTGTACTCTGAGTGCAGTTAATTTATCATTACATCACTATA 873 consensus_10664#2 ------------------------------------------------------------ consensus_10664#0 ------------------------------------------------------------ consensus_10664#1 CTAGCTACAACGTAGTCTCATTTGACTATTGTACCACTGGGAAATTA 920 consensus_10664#2 ----------------------------------------------- consensus_10664#0 ----------------------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||