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Schistosoma mansoni
cluster # 10664 cluster # 10664       Sequences # 19       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10664#0 length = 1001 sequences # 9  
consensus_10664#1 length = 920 sequences # 9  
consensus_10664#2 length = 279 sequences # 1  

consensusID : consensus_10664#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1001
fasta sequence
                              [CGGAGCCATTAATTCGGCACGCCGTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGGTATGCAATATTTCTCAGCATTACGGTAAATTTTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATCATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCA----ACTTGTG-AAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGG-AAGTTTTGGTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACCCTTTCTTGAGAACTCTTTTTGTCTTCAGTAACTATCCGAATCTCATATGAAAATTTGTGTCAAAATCGCACATAAAATTATGATTTTCAATAAATCCATC]

[+] EMBL CD081577             [CGGAGCCATTAATTCGGCACGCCGTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGGTATGCAATATTTCTCAGCATTACGGTAAATTTTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATCATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCA    ACTTGTG AAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGG AAGTTTTGGTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACC                                                                                                    ]
[+] EMBL CD081711             [        TTAATTCGGCACGAGGTTTACACANAAACTGCTGCGAAATTTTGGAT TCATTCTGTTGCGGTGTTGCCTCAGGTATGCAATATTTCTCAGCATTACGGTAAATTTTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATCATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCA    ACTTGTG AAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGG AAGTTTTGGTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACC                                                                                                    ]
[+] EMBL CD136411             [                                                                                                                                            ATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AI977698             [                                                                                                                                                                                                       TGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGTTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTGCGCATTATATTTATCTA                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD090645             [                                                                                                                                                                                                                                                                                ATCCCTTACAGCAATTGGACTTTCTATTGCACTATGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTAGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTATACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTATCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAg                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD075403             [                                                                                                                                                                                                                                                                                                                                              GATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACCCTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATCATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCA    ACTTGTGAAAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGG AAGTTTTGGTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACCC                                                                                                   ]
[-] EMBL CD074310             [                                                                                                                                                                                                                                                                                                                                                                                                       TTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATTATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCA    ACTTGTGAAAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGG AAGTTTTGGTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACCCTTTCTTGAGAACTCTTTTTGTCTTCAGTAACTATCCGAATCTCATATGAAAATTTGTGTCAAAATCGCACATAAAATTATGATTTTCAATAAATCCATC]
[-] EMBL CD075704             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATCATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCA    ACTTGTGAAAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGG AAGTTTTGGTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACCCTTTCTTGAGAACTCTTTTTGTCTTCAGTAACTATCCGAATCTCATATGAAAATTTGTGTCAAAATCGCACATAAAATTATGATTTTCAATAAATCCATC]
[-] EMBL CD074488             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATTATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCANNNNNCT  TG AAAAAAAATTTATTAATCCGTTCCTAATTGTTTTGAGGNAAAATTT GTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACCCTTTCTTGAGAACTCTTTTTGTCTTCAGTAACTATCCGAATCTCATATGAAAATTTGTGTCAAAATCGCACATAAAATTATGATTTTCAATAAATCCATC]


>consensus_10664#0 CGGAGCCATTAATTCGGCACGCCGTTTACACAGAAACTGCTGCGAAATTTTGGATATCAT TCTGTTGCGGTGTTGCCTCAGGTATGCAATATTTCTCAGCATTACGGTAAATTTTCAGTC ACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAAT AAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACC GCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATT GCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCA TTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCAC CCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTG GTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAA TTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAA AATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCTT ATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTAT CATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTA ACCAACTTGTGAAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGGAAGTTTTGGTA GTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAAC CCTTTCTTGAGAACTCTTTTTGTCTTCAGTAACTATCCGAATCTCATATGAAAATTTGTG TCAAAATCGCACATAAAATTATGATTTTCAATAAATCCATC



consensusID : consensus_10664#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 920
fasta sequence
                              [CTCGAGGCCAGAATTTGGCACGAGGCAGCTGATCCCAAGGTTGTAGTTAATCGCGCGATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCANAGAANAGTCAAATAATTTCCAATCCCTAA-ATCCCATACTACTTAGANACTCGATTTCAAAAACACTGTACATANAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTNTATTTATCTATAAGCTTATTTATACGTCGNTACTTTTTGGGGTTNNNCTTGTTGTACTCTGAGTGCAGTTAATTTATCATTACATCACTATACTAGCTACAACGTAGTCTCATTTGACTATTGTACCACTGGGAAATTA]

[+] EMBL CD080852             [CTCGAGGCCAGAATTTGGCACGAGGCACCTGATCCCAAGGTTGTAGTTAATCGCGCGATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGAC ATTAGCGAAACCTGATGTTATGGCGCTAATGCANAGAANAGTCAAATAATTTCCAATCCCTAA ATCCCATACTACTTAGANACTCGATTTCAAAAACACTGTACATANAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTNTATTTATCTATAAGCTTATTTATACGTCGNTACTTTTTGGGGTTNNNCTTGTTGTACTCTGAGTGCAGTTAATTTATCATTACATCACTATACTAGCTACAACGTAGTCTCATTTGACTATTGTACCACTGGGAAATTA]
[-] EMBL CD092874             [                    gaaatCAGCTGATCNCAAGGTTGTAGTTAATCGCGCGATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTC                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD111124             [                           GCTGATCCCAAGGTTGTAGTTAATCGCGCGATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTATGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTGTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTA TTGACAGATCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD082089             [                           aggacTCCCAA GTTGTAGTTAATCGCGCGATGGTTCTGCTTTTACAAACGACGCAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCANAGAAAAGTCAAATAATTTCCAATCC                                                                                                                                                                                                                                         ]
[+] EMBL CD164918             [                                                  TCGCGCGATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCAGTGTTCTGCTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD164976             [                                                  TCGCGCGATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCCTTTTCCTGGGCATATGTTTTCGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTNAACTTGGTGCCTATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD162730             [                                                                 GCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCATCCATGCAACCGCTAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD080395             [                                                                      TACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCANAGAANAGTCAAATAATTTCCAAT CCTAANATCCCATACTACTTAGAAAC                                                                                                                                                                                                                ]
[-] EMBL CD111534             [                                                                                                                                                                                                                                      ATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGT                                                                                                                                                                                                                                                                                                                            ]


>consensus_10664#1 CTCGAGGCCAGAATTTGGCACGAGGCAGCTGATCCCAAGGTTGTAGTTAATCGCGCGATG GTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTT TTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTC ACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGT TGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGT GCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTC GGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACA GCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTC TTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAG CTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGT GGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATG CANAGAANAGTCAAATAATTTCCAATCCCTAAATCCCATACTACTTAGANACTCGATTTC AAAAACACTGTACATANAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATT NTATTTATCTATAAGCTTATTTATACGTCGNTACTTTTTGGGGTTNNNCTTGTTGTACTC TGAGTGCAGTTAATTTATCATTACATCACTATACTAGCTACAACGTAGTCTCATTTGACT ATTGTACCACTGGGAAATTA



consensusID : consensus_10664#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 279
fasta sequence
                              [CGCGGCCAAAAATTCGGTCCGAGGTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAG]

[+] EMBL CD077931             [CGCGGCCAAAAATTCGGTCCGAGGTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAG]


>consensus_10664#2 CGCGGCCAAAAATTCGGTCCGAGGTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGT GGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAAC ATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTT TGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTT GACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10664#1      ------------------------------------------------------------
consensus_10664#2      ------------------------------------------------------------
consensus_10664#0      CGGAGCCATTAATTCGGCACGCCGTTTACACAGAAACTGCTGCGAAATTTTGGATATCAT 60
                                                                                   

consensus_10664#1      ------------------------------------------------------------
consensus_10664#2      ------------------------------------------------------------
consensus_10664#0      TCTGTTGCGGTGTTGCCTCAGGTATGCAATATTTCTCAGCATTACGGTAAATTTTCAGTC 120
                                                                                   

consensus_10664#1      ------------------------------------------------------------
consensus_10664#2      ------------------------------------------------------------
consensus_10664#0      ACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAAT 180
                                                                                   

consensus_10664#1      ----CTCGAGGCCAGAATTTGGCACGAGGCAGCTGATCCCAAGGTTGTAGTTAATCGCGC 56
consensus_10664#2      ---------------------------------------------CGCGGCCAAAAATTC 15
consensus_10664#0      AAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACC 240
                                                                        *  *      *

consensus_10664#1      GATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCT 116
consensus_10664#2      GGT----CCGAGGTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCT 71
consensus_10664#0      GCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATT 300
                       * *      *   ** * *   **  *    * *   **     *    *   *  *  *

consensus_10664#1      -CTTTTTCCTGGGCATATG------TTTTTGTTGGGCTT--CCGAAGCACTACA-TAACA 166
consensus_10664#2      -CTTTTTCCTGGGCATATG------TTTTTGTTGGGCTT--CCGAAGCACTACA-TAACA 121
consensus_10664#0      GCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCA 360
                        *  ***  **** ** **       * *******  **  *    * *   ** *  **

consensus_10664#1      TAAGAGGAGAATTCACGGCTTCAAAAATATCATT--------TTACACAGAAACTGCTGC 218
consensus_10664#2      TAAGAGGAGAATTCACGGCTTCAAAAATATCATT--------TTACACAGAAACTGCTGC 173
consensus_10664#0      TTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCAC 420
                       * *   *  *  *      *****  ** *  **         *  *****   *    *

consensus_10664#1      GAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCC 278
consensus_10664#2      GAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCC 233
consensus_10664#0      CCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTG 480
                          **  *** *       **    *   ** * **  *    **   *   ** **   

consensus_10664#1      ATGCGTTGACTCT-----AAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCA 333
consensus_10664#2      ATGCGTTGACTCT-----AAACTTGGTGCCTATGATGCTTATAATAAGGAG--------- 279
consensus_10664#0      GTTGGCCGACAATTAGCGAAACCTGATGT-TATGGCGCTAATGCAAAGAAAAGTCAAATA 539
                        *  *  ***  *     **** ** **  ****  *** **   *** *          

consensus_10664#1      GTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTT 393
consensus_10664#2      ------------------------------------------------------------
consensus_10664#0      ATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAA 599
                                                                                   

consensus_10664#1      GCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTA 453
consensus_10664#2      ------------------------------------------------------------
consensus_10664#0      AAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCT 659
                                                                                   

consensus_10664#1      TTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTT 513
consensus_10664#2      ------------------------------------------------------------
consensus_10664#0      TATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTA 719
                                                                                   

consensus_10664#1      ATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCT 573
consensus_10664#2      ------------------------------------------------------------
consensus_10664#0      TCATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGT 779
                                                                                   

consensus_10664#1      TGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTA 633
consensus_10664#2      ------------------------------------------------------------
consensus_10664#0      AACCAACTTGTGAAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGGAAGTTTTGGT 839
                                                                                   

consensus_10664#1      GCGAAACCTGATGTTATGGCGCTAATGCANAGAANAGTCAAATAATTTCCAATCCCTAAA 693
consensus_10664#2      ------------------------------------------------------------
consensus_10664#0      AGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAA 899
                                                                                   

consensus_10664#1      TCCCATACTACTTAGANACTCGATTTCAAAAACACTGTACATANAAATCAAACATGTATA 753
consensus_10664#2      ------------------------------------------------------------
consensus_10664#0      CCCTTTCTTGAGAACTCTTTTTGTCTTCAGTAACTATCCGAATCTCATATGAAAATTTGT 959
                                                                                   

consensus_10664#1      GAAAAAATTAGTTCTTCCGTATGCATTNTATTTATCTATAAGCTTATTTATACGTCGNTA 813
consensus_10664#2      ------------------------------------------------------------
consensus_10664#0      GTCAAAATCGCACATAAAATTATGATTTTCAATAAATCCATC------------------ 1001
                                                                                   

consensus_10664#1      CTTTTTGGGGTTNNNCTTGTTGTACTCTGAGTGCAGTTAATTTATCATTACATCACTATA 873
consensus_10664#2      ------------------------------------------------------------
consensus_10664#0      ------------------------------------------------------------
                                                                                   

consensus_10664#1      CTAGCTACAACGTAGTCTCATTTGACTATTGTACCACTGGGAAATTA 920
consensus_10664#2      -----------------------------------------------
consensus_10664#0      -----------------------------------------------
                                                                      




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)