cluster # 10666

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Schistosoma mansoni
cluster # 10666 cluster # 10666 Sequences # 19 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10666#0 length = 1174 sequences # 15
consensus_10666#1 length = 367 sequences # 1

consensus_10666#2 length = 165 sequences # 1
consensus_10666#3 length = 161 sequences # 1
consensus_10666#4 length = 141 sequences # 1

consensusID : consensus_10666#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1174
fasta sequence

                              [ACAGTAAATTATTGTTATAATCAGCATCATTGTTTCTTTATAATAACGATTAATAATATTAATATTAAACAATTAAGTGACCAAAATGATTTGATTTTCATCGATAAAAAAATAAGACAAGATTATAAGCATGTTGTATGCTGTAGCACAACAAAGCTGATACCAAATATGTTTTTTTTGCTTTTTAAACAAATGAATCCATTACTTGGAAACAAGAAAAGAAACTGTTCATTATTTAAATAAGCATTGAAGTTAAAATTAATAAAAAGAACATGACGATTTAAAAAAAGGTATTCCAATCATTCATTCAATAGTAACGAACTAGTTAGCTGGGTGTTAAAGCAATGAAAAGAAAAGAAAACATCGACTTGTTATTCATCGTAATGGATATGCTTTTGTCCTGGTACAAAACATTCGGTCAGAAAACAAAAGCAATATCAATTTGCCATGTGAAATATATGTTTACAGTTTGTTTTCTTTGCTTGTGAATTTAGAATTTCTCCCGTCTTCGATCGTCTCAATTAGGGAAAATGCATGATAAAAATACAAAGATGAAATTATTGGGTAAGATGTGAAAGGTAAGCCATAGTCAATAATGGGTGATCAAGATAAGGTTAATAAACTAATCGGAAAGCATTGATAGGCAAAACAATAACCGAGAATTAGTAGTAGTCATCTATGTCTTATTAATAGTAATGTTAATTACAATAATGGAACTTACTAAATTTGACAAGAACAGTTGGATTTTCATTGAGTCTGAATAATGAACATATAGATTTCTTTGATGTGTACAAATAATGTCACGAAAAAAAAGAAAGGTGTGTCATTTTCGCATTTATGCTATGGTTAGGTCA-TTTGTGTTATTCAAATGGTAGGTTGTTTGATTCAGACAGGTCAGAGTGGTCAAATTCCATTGATGTTTTCATTGTCATATTTTGCTTCATCTCAATAGTATCTTCTTCATTAATATAACTGTTATTATTAGTAAGATAATCATTATTGTTACTGTTATTATTAGTCAAGATAAGATTTGTATTAATGGTATCAGAGTTCTGATGATTTTCAAAATTATTTTCATTANAAACAAATTCTTTAGCATTGTTTAAAACAGATTGAACTAAAGATTGAGCCTCATCTTCAAATTCATCATTTGCATTTATAAAAATTTGTATGT]

[+] EMBL AA999321             [ACAGTAAATTATTGTTATAATCAGCATCATTGTTTCTTTATAATAACGATTAATAATATTAATATTAAACAATTAAGTGACCAAAATGATTTGATTTTCATCGATAAAAAAATAAGACAAGATTATAAGCATGTTGTATGCTGTAGCACAGCAAAGCTGATACCAAATATGTTTTTTTTGCTTTTTTAACAAATGAATCCATTACTTGGAAACAAGAAAAGAAACTGTTCATTATTTAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD077275             [                   ATCAGCATCATTGTTTCTTTATAATAACGATTAATAATATTAATATTAAACAATTAAGTGACCAAAATGATTTGATTTTCATCGATAAAAAAATAAGACAAGATTATAAGCATGTTGTATGCTGTAACACAACAAAGCTGATACCAAATATGTTTTTTTTGCTTTTTAAACAAATGAATCCATTACTTGGAAACAAGAAAAGAAACTGTTCATTATTTAAATAAGCATTGAAGTTAAAATTAATAAAAAGAACATGACGATTTAAAAAAAGGTATTCCAATCATTCATTCAATAGTAACGAACTAGTTAGCTGGGTGTTAAAGCAATGAAAAGAAAAGAAAACATCGACTTGTTATTCATCGTAATGGATATGCTTTTGTCCTGGTACAAAACATTCGGTCAGAAAACAAAAGCAATATCAATTTGCCATGTGAAATATATGTTTACAGTTTGTTTTCTTTGCTTGTGAATTTAGAATTTCTCCCGTCTTCGATCGTCTCAATTAGGGAAAATGCATGATAAAAATACAAAGATGAAATTATTGGGTAAGATGTGAAAGGTAAGCCATAGTCAATAATGGGTGATCAAGATAAGGTTAATAAACTAATCGGAAAGCATTGATAGGCAAAACAATAACCGAGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BF936595             [                                                                                                                              AAGCATGTTGTATGCTGTAGCACAACAAAGCTGATACCAAATATGTTTTTTTTGCTTTTTAAACAAATGAATCCATTACTTGGAAACAAGAAAAGAAACTGTTCATTATTTAAATAAGCATTGAAGTTAAAATTAATAAAAAGAACATGACGATTTAAAAAAAGGTATTCCAATCATTCATTCAATAGTAACGAACTAGTTAGCTGGGTGTTAAAGCAATGAAAAGAAAAGAAAACATCGACTTGTTATTCATCGTAATGGATATGCTTTTGTCCTGGTACAAAACATTCGGTCAGAAAACAAAAGCAATATCAATTTGCCATGTGAAATATATGTTTACAGTTTGTTTTCTTTGCTTGTGAATTTAAAATTTCTCCCGTCTTCGATCGTCTCAATTAGGGAAAATGCATGATAAAAATACAAAGATGAAATTATTGGGTAAGATGTGAAAGGTAAGCCATAGTCAATAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL SMAA14093            [                                                                                                                                                                              TTTTTGCTTTTTAAACAAATGAATCCATTACTTGGAAACAAGAAAAGAAACTGTTCATTATTTAAATAAGCATTGAAGTTAAAATTAATAAAAAGAACATGACGATTTAAAAAAAGGTATTCCAATCATTCATTCAATAGTAACGAACTAGTTAGCTGGGTGTTAAAGCAATGAAAAGAAAAGAAAACATCGACTTGTTATTCATCGTAAT GATATGCTTTTGTCCTGGTACAAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD112332             [                                                                                                                                                                                                                                                                                                                                                       AATGAAAAGAAAAGAGAACATCGACTTGTTATTCATCGTAATGGATATGCTTTTGTCCTGGTACAAAACATTCGGTCAGAAAACAAAAGCAATATCAATTTGCCATGTGAAATATATGTTTACAGTTTGTTTTCTTTGCTTGTGAATTTAGAATTTCTCCCGTCTTCGATCGTCTCAGTTAGGGAAAATGCATGATAAAAATACAAAGATGAAATTATTGGGTAAGATGTGAAAGGTAAGCCATAGTCAATAATGGGTGATCAAGATAAGGTTAATAAACTAATCGGAAAGCATTGATAGGCAAAACAATAACCGAGAATTAGTAGTAGTCATCTATGTCTTATTAATAGTAATGTTAATTACAATAATGGAACTTACTAAATTTGACAAGAACAGTTGGATTTTCATTGAGTCTGAATAATGAACATATAGATTTCTTTGATGTGTACAAATAATGTCACG                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD068175             [                                                                                                                                                                                                                                                                                                                                                         TGAAAAGAAAAGAAAACATCGACTTGTTATTCATCGTAATGGATATGCTTTTGTCCTGGTACAAAACATTCGGTCAGAAAACAAAAGCAATATCAATTTGCCATGTGAAATATATGTTTACAGTTTGTTTTCTTTGCTTGTGAATTTAGAATTTCTCCCGTCTTCGATCGTCTCAATTAGGGAAAATGCATGATAAAAATACAAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD133324             [                                                                                                                                                                                                                                                                                                                                                                                                                             TTCGGTCAGAAAACAAAAGCAATATCAATTTGCCATGTGAAATATATGTTTACAGTTTGTTTTCTTTGCTTGTGAATTTAGAATTTCTCCCGTCTTCGATCGTCTCAATTAGGGAAAATGCATGATAAAAATACAAAGATGAAATTATTGGGTAAGATGTGGAAGGTAAGCCATAGTCAATAATGGGTGATCAAGATAAGGTTAATAAACTAATCGGAAAGCATTGATAGGCAAAACAATAACCGAGAATTAGTAGTAGTCATCTATGTCTTATTAATAGTAATGTTAATTACAATAATGGAACTTACTAAATTTGACAAGAACAGTTGGATTTTCATTGAGTCTGAATAATGAACATATAGATTTCTTTGATGTGTACAAA                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD133417             [                                                                                                                                                                                                                                                                                                                                                                                                                              TCGGTCAGAAAACAAAAGCAATATCAATTTGCCATGTGAAATATATGTTTACAGTTTGTTTTCTTTGCTTGTGAATTTAGAATTTCTCCCGTCTTCGATCGTCTCAATTAGGGAAAATGCATGATAAAAATACAAAGATGAAATTATTGGGTAAGATGTGAAAGGTAAGCCATAGTCAATAATGGGTGATCAAGATAAGGTTAATAAACTAATCGGAAAGCATTGATAGGCAAAACAATAACCGAGAATTAGTAGTAGTCATCTATGTCTTATTAATAGTAATGTTAATTACAATAATGGAACTTACTAAATTTGACAAGAACAGTTGGATTTTCATTGAGTCTGAATAATGAACATATAGATTTCTTTGATGTGTACAAAT                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD072150             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AATGGGTGATCAAGATAAGGTTAATAAACTAATCGGAAAGCATTGATAGGCAAAACAATAACCGAGAATTAGTAGTTGTCATCTATGTCTTGTTAATAGTAATGTTAATTACAATAATGGAACTTACTAAATTTGACAAGAACAGTTGGATTTTCATTGAGTCTGAATAATGAACATATAGATTTCTTTGATGTGTACAAATAATGTCACGAAAAAAAAG AAGGTGTGTCATTTTCGCATTTATGCTATNGGTAGGTCG TTTGTGTTATT                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD072139             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AATGGGTGATCAAGATAAGGTTAATAAACTAATCGGAAAGCATTGATAGGCAAAACAATAACCGAGAATTAGTAGTAGTCATCTATGTCTTATTAATAGTAATGTTAATTACAATAATGGAACTTACTAAATTTGACAAGAACAGTTGGATTTTCATTGAGTCTGAATAATGAACATATAGATTTCTTTGATGTGTACAAATAATGTCACGAAAAAAAAAGAAGGTGTGTCATTTTCGCATTTATGCTATGGGTAGGTCT TTTGT                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD202087             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AATGGGTGATCAAGATAAGGTTAATAAACTAATCGGAAAGCATTGATAGGCAAAACAATAACCGAGAATTAGTAGTAGTCATCTATGTCTTATTAATAGTAATGTTAATTACAATAATGGAACTTACTAAATTTGACAAGAGCAGTTGGATTTTCATTGAGTCTGAATAATGAACATATAGATTTCTTTGATGTGTACAAATAATGTCACGAAAAAAAAGAAAGGTGTGTCATTTTCGCATTTATGCTATGGTTGGGTCA TTTGTGTTATTCAAATGGTAGGTTGTTTGATTCAGACAGGTCAGAGTGGTCAAATTCCATTGATGTTTTCATTGTCATATTTTGCTTCATCTCAATAGTATCTTCTTCATTAATATAACTGTTATTATTAGTAAGATAATCATTATTGTTACTGTTATTATTAGTCAAGATAAGATTTGTATTAATGGTATCAGAGTTCTGATGATTTTCAAAATTATTTTCATTANAAACAAATTCTTTAGCATTGTTTAAAACAGATTGAACTAAAGATTGAGCCTCATCTTCAAATTCATCATTTGCATTTATAAAAATTTGTATGT]
[+] EMBL CD097694             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AATGGGTGATCAAGATAAGGTTAATAAACTAATCGGAAAGCATTGATAGGCAAAACAATAACCGAGAATTAGTAGTAGTCATCTATGTCTTATTAATAGTAATGTTAATTACAATAATGGAACTTACTAAATTTGACAAGAACAGTTGGATTTTCATTGAGTCTGAATAATGAACATATAGATTTCTTTGATGTGTACAAATAATGTCACGAAAAAAAAGAAAGGTGTGTCATTATCGCATTTATGCTATGGTTAGGTCA TTTGTGTTATTCAAAT GTTGGTTGTTTGATTCAGACAGGTCAGAGTGGTCAAATTCCATTGATGTTTTCATTGTCATATTTTGTTTCATCTCAATAGTATCTTCTTCATTAATATAACTGTTATTATTAGTAAGATAATCATTATTGTTACTGTTATTATTAGTCAAGATAAGATTTGTATTAATGGTATCAGAGTTC                                                                                                                         ]
[+] EMBL CD072140             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AATGGGTGATCAAGATAAGGTTAATAAACTAATCGGAAAGCATTGATAGGCAAAACAATAACCGAGAATTAGTAGTAGTCATCTATGTCTTATTAATAGTAATGTTAATTACAATAATGGAACTTACTAAATTTGACAAGAACAGTTGGATTTTCATTGAGTCTGAATAATGAACATATAGATTTCTTTGATGTGTACAAATAATGTCACGAAAAAAAAGAAAGGTGTGTCATTTTCGCATTTATGCTATGGTTAGGTCATTTTGTG TATTCAAAT                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD072097             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AATGGGTGATCAAGATAAGGTTAATAAACTAATCGGAAGGCATTGATAGGCAAAACAATAACCGAGAATTAGTAGTAGTCATCTATGTCTTATTAATAGTAATGTTAATTACAATAATGGAACTTACTACATTTGACAAGAACAGTTGGATTTTCATTGAGTCTGAATAATGA                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD072154             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AATGGGTGATCAAGATAAGGCTAATAAACTAATCGTAAAGCATTGATAGGCCAAACAATAACCGAGAATTAGTAGTAGCCATCTATGTCTTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]




>consensus_10666#0
ACAGTAAATTATTGTTATAATCAGCATCATTGTTTCTTTATAATAACGATTAATAATATT
AATATTAAACAATTAAGTGACCAAAATGATTTGATTTTCATCGATAAAAAAATAAGACAA
GATTATAAGCATGTTGTATGCTGTAGCACAACAAAGCTGATACCAAATATGTTTTTTTTG
CTTTTTAAACAAATGAATCCATTACTTGGAAACAAGAAAAGAAACTGTTCATTATTTAAA
TAAGCATTGAAGTTAAAATTAATAAAAAGAACATGACGATTTAAAAAAAGGTATTCCAAT
CATTCATTCAATAGTAACGAACTAGTTAGCTGGGTGTTAAAGCAATGAAAAGAAAAGAAA
ACATCGACTTGTTATTCATCGTAATGGATATGCTTTTGTCCTGGTACAAAACATTCGGTC
AGAAAACAAAAGCAATATCAATTTGCCATGTGAAATATATGTTTACAGTTTGTTTTCTTT
GCTTGTGAATTTAGAATTTCTCCCGTCTTCGATCGTCTCAATTAGGGAAAATGCATGATA
AAAATACAAAGATGAAATTATTGGGTAAGATGTGAAAGGTAAGCCATAGTCAATAATGGG
TGATCAAGATAAGGTTAATAAACTAATCGGAAAGCATTGATAGGCAAAACAATAACCGAG
AATTAGTAGTAGTCATCTATGTCTTATTAATAGTAATGTTAATTACAATAATGGAACTTA
CTAAATTTGACAAGAACAGTTGGATTTTCATTGAGTCTGAATAATGAACATATAGATTTC
TTTGATGTGTACAAATAATGTCACGAAAAAAAAGAAAGGTGTGTCATTTTCGCATTTATG
CTATGGTTAGGTCATTTGTGTTATTCAAATGGTAGGTTGTTTGATTCAGACAGGTCAGAG
TGGTCAAATTCCATTGATGTTTTCATTGTCATATTTTGCTTCATCTCAATAGTATCTTCT
TCATTAATATAACTGTTATTATTAGTAAGATAATCATTATTGTTACTGTTATTATTAGTC
AAGATAAGATTTGTATTAATGGTATCAGAGTTCTGATGATTTTCAAAATTATTTTCATTA
NAAACAAATTCTTTAGCATTGTTTAAAACAGATTGAACTAAAGATTGAGCCTCATCTTCA
AATTCATCATTTGCATTTATAAAAATTTGTATGT

consensusID : consensus_10666#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 367
fasta sequence

                              [TTCGGTCAGAAAACAAAAGCTATATCAATTTGCCATGTGAAATATATGTTTACAGGTTGTTGTCTTTGCTTGTGAATTTAAAATTTCTCCCGTCTTCGATCGTCTCAATTACGGAAAATGCTTGATATAAATACAAAGATTAAATTATTGCTTAAGATGCTGAAAGGATAACCATAGTCAATATTGGGTGATCAAGATATGGTTACTATACTAATCGTAAAGCATTGATAGGCAAAACGATATCCGAGAATTAGTAGTATGCATCTATGTCTTATTAATACGAATGATAATTACAATAATGGAACTTACTAAATCTGACAAGAACAGCTGGATCTTCATTGAGTCTGAATAATGAGCATATAGATTT]

[+] EMBL CD183432             [TTCGGTCAGAAAACAAAAGCTATATCAATTTGCCATGTGAAATATATGTTTACAGGTTGTTGTCTTTGCTTGTGAATTTAAAATTTCTCCCGTCTTCGATCGTCTCAATTACGGAAAATGCTTGATATAAATACAAAGATTAAATTATTGCTTAAGATGCTGAAAGGATAACCATAGTCAATATTGGGTGATCAAGATATGGTTACTATACTAATCGTAAAGCATTGATAGGCAAAACGATATCCGAGAATTAGTAGTATGCATCTATGTCTTATTAATACGAATGATAATTACAATAATGGAACTTACTAAATCTGACAAGAACAGCTGGATCTTCATTGAGTCTGAATAATGAGCATATAGATTT]




>consensus_10666#1
TTCGGTCAGAAAACAAAAGCTATATCAATTTGCCATGTGAAATATATGTTTACAGGTTGT
TGTCTTTGCTTGTGAATTTAAAATTTCTCCCGTCTTCGATCGTCTCAATTACGGAAAATG
CTTGATATAAATACAAAGATTAAATTATTGCTTAAGATGCTGAAAGGATAACCATAGTCA
ATATTGGGTGATCAAGATATGGTTACTATACTAATCGTAAAGCATTGATAGGCAAAACGA
TATCCGAGAATTAGTAGTATGCATCTATGTCTTATTAATACGAATGATAATTACAATAAT
GGAACTTACTAAATCTGACAAGAACAGCTGGATCTTCATTGAGTCTGAATAATGAGCATA
TAGATTT

consensusID : consensus_10666#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 165
fasta sequence

                              [ACAAATGGCTCCATTACTTGGAAACAAGAAAAGAAACTTTTCATTATTTAAATAAGCATTGTGGTAAAATTATAAACGGACATGGCGGTTTAAAAAAGGGTATTCCACTCATTCATTCAATAGTACCGCACTATTTAGCTGGGTGTTAAAACAATTAAAAGAAAA]

[+] EMBL SMAA28905            [ACAAATGGCTCCATTACTTGGAAACAAGAAAAGAAACTTTTCATTATTTAAATAAGCATTGTGGTAAAATTATAAACGGACATGGCGGTTTAAAAAAGGGTATTCCACTCATTCATTCAATAGTACCGCACTATTTAGCTGGGTGTTAAAACAATTAAAAGAAAA]




>consensus_10666#2
ACAAATGGCTCCATTACTTGGAAACAAGAAAAGAAACTTTTCATTATTTAAATAAGCATT
GTGGTAAAATTATAAACGGACATGGCGGTTTAAAAAAGGGTATTCCACTCATTCATTCAA
TAGTACCGCACTATTTAGCTGGGTGTTAAAACAATTAAAAGAAAA

consensusID : consensus_10666#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 161
fasta sequence

                              [ACAGTAAATTATTGTTATAATCAGCATCATTGTTTCTTTATAATAACGGTTAATAATATTAATATTTCCCCATTACGGGCCCCAAAATGGTTTGATTTCCATCGATAAAAAAATAAGCCAAGGTTATAAGCATGTTGTATGCTGTAGCACAACAAAGCTGA]

[+] EMBL SMAA28913            [ACAGTAAATTATTGTTATAATCAGCATCATTGTTTCTTTATAATAACGGTTAATAATATTAATATTTCCCCATTACGGGCCCCAAAATGGTTTGATTTCCATCGATAAAAAAATAAGCCAAGGTTATAAGCATGTTGTATGCTGTAGCACAACAAAGCTGA]




>consensus_10666#3
ACAGTAAATTATTGTTATAATCAGCATCATTGTTTCTTTATAATAACGGTTAATAATATT
AATATTTCCCCATTACGGGCCCCAAAATGGTTTGATTTCCATCGATAAAAAAATAAGCCA
AGGTTATAAGCATGTTGTATGCTGTAGCACAACAAAGCTGA

consensusID : consensus_10666#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 141
fasta sequence

                              [CCATTACTTGAAACAAGNNGAGNGCTGTTCATTATATAAATAAGCAGTGAAGTTAAAATTAANAAANAGAANATGNCGATNNAANAAAAGGTATTCCAATCATTCACTCAATAGTAACGAACTAGTTAGCTGGNTGTTAAA]

[-] EMBL SM557                [CCATTACTTGAAACAAGNNGAGNGCTGTTCATTATATAAATAAGCAGTGAAGTTAAAATTAANAAANAGAANATGNCGATNNAANAAAAGGTATTCCAATCATTCACTCAATAGTAACGAACTAGTTAGCTGGNTGTTAAA]




>consensus_10666#4
CCATTACTTGAAACAAGNNGAGNGCTGTTCATTATATAAATAAGCAGTGAAGTTAAAATT
AANAAANAGAANATGNCGATNNAANAAAAGGTATTCCAATCATTCACTCAATAGTAACGA
ACTAGTTAGCTGGNTGTTAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10666#0      ------------------------------------------------------------
consensus_10666#3      ------------------------------------------------------------
consensus_10666#1      TTCGGTCAGAAAACAAAAGCTATATCAATTTGCCATGTGAAATATATGTTTACAGGTTGT 60
consensus_10666#2      ------------------------------------------------------------
consensus_10666#4      ------------------------------------------------------------
                                                                                   

consensus_10666#0      --------------------------------------------------ACAGTAAATT 10
consensus_10666#3      --------------------------------------------------ACAGTAAATT 10
consensus_10666#1      TGTCTTTGCTTGTGAATTTAAAATTTCTCCCGTCTTCGATCGTCTCAATTACGGAAAATG 120
consensus_10666#2      -----------------------------------------------ACAAATGGCTCCA 13
consensus_10666#4      ---------------------------------------------------------CCA 3
                                                                                   

consensus_10666#0      ATTGTTATAATCAGCATCATTGT----TTCTTTATAAT----AACGATTAATAATA-TTA 61
consensus_10666#3      ATTGTTATAATCAGCATCATTGT----TTCTTTATAAT----AACGGTTAATAATA-TTA 61
consensus_10666#1      CTTGATATAAATACAAAGATTAAATTATTGCTTAAGATGCTGAAAGGATAACCATAGTCA 180
consensus_10666#2      TTACTTGGAAACAAGAAAAGAAA----CTTTTCATTATTT--AAATAAGCATTGTGGT-A 66
consensus_10666#4      TTACTTG-AAACAAGNNGAGNG-----CTGTTCATTATAT--AAATAAGCAGTGAAGTTA 55
                        *   *  **  *     *         *  * *  **    **      *      * *

consensus_10666#0      ATATTAAACAAT-----TAAGTGACC-AAA---ATGATTTGATTTTCATCGATAAAAAAA 112
consensus_10666#3      ATATTTCCCCAT-----TACGGGCCCCAAA---ATGGTTTGATTTCCATCGATAAAAAAA 113
consensus_10666#1      ATATTGGGTGATCAAGATATGGTTACTATACTAATCGTAAAGCATTGATAGGCAAAACGA 240
consensus_10666#2      AAATTA-TAAACGGA--CATGGCGGTTTAAAAAAGGGTATTCCACTCATTCATTCAATAG 123
consensus_10666#4      AAATTAANAAANAGAA-NATGNCGATNNAANAAAAGGTATTCCAATCATTCACTCAATAG 114
                       * ***     *       * *        *   *   *         **      **   

consensus_10666#0      TAAGACAA-GATTATAAGCATGT-TGTATGCTGTAGCACAACAAA-GCTGATACCAAATA 169
consensus_10666#3      TAAGCCAA-GGTTATAAGCATGT-TGTATGCTGTAGCACAACAAA-GCTGA--------- 161
consensus_10666#1      TATCCGAG-AATTAGTAGTATGCATCTATGTCTTATTAATACGAATGATAATTACAATAA 299
consensus_10666#2      TACCGCACTATTTAGCTGGGTGT-TAAAACAATTAAAAGAAAA----------------- 165
consensus_10666#4      TAACGAACTAGTTAGCTGGNTGT-TAAA-------------------------------- 141
                       **    *    ***   *  **  *  *                                

consensus_10666#0      TGTTTTTTTTGCTTTTTAAACAAATGAATCCATTACTTGGAAACAAGAAAAGAAACTGTT 229
consensus_10666#3      ------------------------------------------------------------
consensus_10666#1      TGGAACTTACTAAATCTGACAAGAACAGCTGGATCTTCATTGAGTCTGAATAATGAGCAT 359
consensus_10666#2      ------------------------------------------------------------
consensus_10666#4      ------------------------------------------------------------
                                                                                   

consensus_10666#0      CATTATTTAAATAAGCATTGAAGTTAAAATTAATAAAAAGAACATGACGATTTAAAAAAA 289
consensus_10666#3      ------------------------------------------------------------
consensus_10666#1      ATAGATTT---------------------------------------------------- 367
consensus_10666#2      ------------------------------------------------------------
consensus_10666#4      ------------------------------------------------------------
                                                                                   

consensus_10666#0      GGTATTCCAATCATTCATTCAATAGTAACGAACTAGTTAGCTGGGTGTTAAAGCAATGAA 349
consensus_10666#3      ------------------------------------------------------------
consensus_10666#1      ------------------------------------------------------------
consensus_10666#2      ------------------------------------------------------------
consensus_10666#4      ------------------------------------------------------------
                                                                                   

consensus_10666#0      AAGAAAAGAAAACATCGACTTGTTATTCATCGTAATGGATATGCTTTTGTCCTGGTACAA 409
consensus_10666#3      ------------------------------------------------------------
consensus_10666#1      ------------------------------------------------------------
consensus_10666#2      ------------------------------------------------------------
consensus_10666#4      ------------------------------------------------------------
                                                                                   

consensus_10666#0      AACATTCGGTCAGAAAACAAAAGCAATATCAATTTGCCATGTGAAATATATGTTTACAGT 469
consensus_10666#3      ------------------------------------------------------------
consensus_10666#1      ------------------------------------------------------------
consensus_10666#2      ------------------------------------------------------------
consensus_10666#4      ------------------------------------------------------------
                                                                                   

consensus_10666#0      TTGTTTTCTTTGCTTGTGAATTTAGAATTTCTCCCGTCTTCGATCGTCTCAATTAGGGAA 529
consensus_10666#3      ------------------------------------------------------------
consensus_10666#1      ------------------------------------------------------------
consensus_10666#2      ------------------------------------------------------------
consensus_10666#4      ------------------------------------------------------------
                                                                                   

consensus_10666#0      AATGCATGATAAAAATACAAAGATGAAATTATTGGGTAAGATGTGAAAGGTAAGCCATAG 589
consensus_10666#3      ------------------------------------------------------------
consensus_10666#1      ------------------------------------------------------------
consensus_10666#2      ------------------------------------------------------------
consensus_10666#4      ------------------------------------------------------------
                                                                                   

consensus_10666#0      TCAATAATGGGTGATCAAGATAAGGTTAATAAACTAATCGGAAAGCATTGATAGGCAAAA 649
consensus_10666#3      ------------------------------------------------------------
consensus_10666#1      ------------------------------------------------------------
consensus_10666#2      ------------------------------------------------------------
consensus_10666#4      ------------------------------------------------------------
                                                                                   

consensus_10666#0      CAATAACCGAGAATTAGTAGTAGTCATCTATGTCTTATTAATAGTAATGTTAATTACAAT 709
consensus_10666#3      ------------------------------------------------------------
consensus_10666#1      ------------------------------------------------------------
consensus_10666#2      ------------------------------------------------------------
consensus_10666#4      ------------------------------------------------------------
                                                                                   

consensus_10666#0      AATGGAACTTACTAAATTTGACAAGAACAGTTGGATTTTCATTGAGTCTGAATAATGAAC 769
consensus_10666#3      ------------------------------------------------------------
consensus_10666#1      ------------------------------------------------------------
consensus_10666#2      ------------------------------------------------------------
consensus_10666#4      ------------------------------------------------------------
                                                                                   

consensus_10666#0      ATATAGATTTCTTTGATGTGTACAAATAATGTCACGAAAAAAAAGAAAGGTGTGTCATTT 829
consensus_10666#3      ------------------------------------------------------------
consensus_10666#1      ------------------------------------------------------------
consensus_10666#2      ------------------------------------------------------------
consensus_10666#4      ------------------------------------------------------------
                                                                                   

consensus_10666#0      TCGCATTTATGCTATGGTTAGGTCATTTGTGTTATTCAAATGGTAGGTTGTTTGATTCAG 889
consensus_10666#3      ------------------------------------------------------------
consensus_10666#1      ------------------------------------------------------------
consensus_10666#2      ------------------------------------------------------------
consensus_10666#4      ------------------------------------------------------------
                                                                                   

consensus_10666#0      ACAGGTCAGAGTGGTCAAATTCCATTGATGTTTTCATTGTCATATTTTGCTTCATCTCAA 949
consensus_10666#3      ------------------------------------------------------------
consensus_10666#1      ------------------------------------------------------------
consensus_10666#2      ------------------------------------------------------------
consensus_10666#4      ------------------------------------------------------------
                                                                                   

consensus_10666#0      TAGTATCTTCTTCATTAATATAACTGTTATTATTAGTAAGATAATCATTATTGTTACTGT 1009
consensus_10666#3      ------------------------------------------------------------
consensus_10666#1      ------------------------------------------------------------
consensus_10666#2      ------------------------------------------------------------
consensus_10666#4      ------------------------------------------------------------
                                                                                   

consensus_10666#0      TATTATTAGTCAAGATAAGATTTGTATTAATGGTATCAGAGTTCTGATGATTTTCAAAAT 1069
consensus_10666#3      ------------------------------------------------------------
consensus_10666#1      ------------------------------------------------------------
consensus_10666#2      ------------------------------------------------------------
consensus_10666#4      ------------------------------------------------------------
                                                                                   

consensus_10666#0      TATTTTCATTANAAACAAATTCTTTAGCATTGTTTAAAACAGATTGAACTAAAGATTGAG 1129
consensus_10666#3      ------------------------------------------------------------
consensus_10666#1      ------------------------------------------------------------
consensus_10666#2      ------------------------------------------------------------
consensus_10666#4      ------------------------------------------------------------
                                                                                   

consensus_10666#0      CCTCATCTTCAAATTCATCATTTGCATTTATAAAAATTTGTATGT 1174
consensus_10666#3      ---------------------------------------------
consensus_10666#1      ---------------------------------------------
consensus_10666#2      ---------------------------------------------
consensus_10666#4      ---------------------------------------------