cluster # 10692

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Schistosoma mansoni
cluster # 10692 cluster # 10692 Sequences # 20 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10692#0 length = 1393 sequences # 18

consensus_10692#1 length = 382 sequences # 1
consensus_10692#2 length = 217 sequences # 1

consensusID : consensus_10692#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 1393
fasta sequence

                              [CCCCGAGGCCAAAAATTCGGCACGAGGAGAACTGTGACGGTAATGGTGTGGTCCATTTGAGGGGTTGTATTGGCTGTCATTTTAGTAATATTTCAGCTTACACGTTCGTCCCATCTCGCTCTTGCTAACAAATCAGCTGGTCTTTCATGATGAAAAAATTCAACAGAAAGGATTTCAAACAGTGTGAACTAAAGCCAGTCGAAAAAGAATTGTCGAAACC-TTTGCCAGGAGTCCCCATTCATTTTAACTATGGCGTG-TTTTTTGATGACGGTTACGACTACATGCAACATCTCAAATCTGCTGATACCAAAGAAGCTTATGTTATATCTGTAATACCTGAAGATTGCGCCAGCAATG-CTTCCAGTCATTCTGACTCATCTAGAATACGTGAACCTGAAGTTGATTACGATGAGCACATTATTAGTGACCTTAATATGGATTCAGAAGCCGAGTCTTTCGACACGGGGAGTGAATTAGA-GGATAACTTTGTAGAACTTGCAGGTGGCCACAGTGTAAAATCCTCAG-AAATCGATAGTGATAACGCCAAAGTGGCTGGGGACACCAATTCATTAAATGCAAAGGCAACAGAAACAGATATCTCAAGGGTTTCTAAAGATAAAGTTGCACTCA-TGGAACGTTTTCTTTACGGTGCCAACGAAAATTCAGAAGACATCACAACTTCGAGCTCCGGTCAGTTTACCAAGG-ATTACGGAATCGATGACTACTCAGATGACTCAACCTCCTTGAATAAAGAGTTCGAAAAGTTAATGTTACGATTCAGATCTCGGTCAAGTTGCAGTCAGTCTTTAGTCT-CTGGAACATCGGTGATGAGCGAAGGCTTGAAATATGCTCTTGGTCGTGACATAGCGATCGCTAAAAAGGACGT-AAACAAGACCGTACGGATTTTGATGATGATCTAAAAGCCATAACAATTAAAAAAAGCTTCGAATTAAGTGGAGTGGATCAACAAGAAGACAGTGGAAGCGATTCCACATATGACGGAGAAAACACTGAACGAATGACCATGTCATGTTCTAATAGTAATTCGAACTTGTATGTTATGAAGCAAAACCATCTAACAATGCCCAGCTCTAGTAAGACGATAAAGAAGTCATCCACAAAGGGAGGTTCTCAAAACAACGATGGCATTATTGAATTTTCAAAACCACTAGACCCTGGGTTACTAGTGAGAGAAAAGGGAGAGTCTATGGAACAAAAGCGCTTACGTAAAGCCACTATCAAGGAACACCGCCAACTGCGACGAAAGATACGTAAGATCAACCAGTTAAACTTCCGTCAGGAGAAAGAAAGACANATAAAAAACAACATGCAAACGATGATAGTCCACTAGCTAAAGTTACTGTGATATTTGGTTGTACAGAATAAATCACCA]

[+] EMBL CD081906             [CCCCGAGGCCAAAAATTCGGCACGAGGAGAACTGTGACGGTAATGGTGTGGTCCATTTGAGGGGTTGTATTGGCTGTCATTTTAGTAATATTTCAGCTTACACGTTCGTCCCATCTCGCTCTTGCTAACAAATCAGCTGGTCTTTCATGATGAAAAAATTCAACAGAAAGGATTTCAAACAGTGTGAACTAAAGCCAGTCGAAAAAGAATTGTCGAAACC TTTGCCAGGAGTCCCCATTCATTTTAACTATGGCGTG TTTTTTGATGACGGTTACGACCACATGCAACATCTCAAATCTGCTGATACCAAAGAAGCTTATGTTATATCTGTAATACCTGAAGATTGCGCCAGCAATG CTTCCAGTCATTCTGACTCATCTAGAATACGTGAACCTGAAGTTGATTACGATGAGCACATTATTAGTGACCTTAATATGGATTCAGAAGCCGAGTCTTTCGACACGGGAAGTGAATTAGA GGATAACTTTGTAGAACTTGCAGGTGGCCACAGTGTAAAATCCTCAG AAATCGATAGTGATAACGCCAAAGTGGCTGGGGACACCAATTCATTAAATGCAAAGGCAACAGAAACAGATATCTCAAGGGTTTCTAAAGATAAAGTTGCACTCANTGGAACGTTNTCTTTACGGTGCCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD154068             [                                                                                TTTAGTAATATTTCAGCTTACACGTTCGTCCCATCTCGCTCTTGCTAACAAATCAGCTGGTCTTTCATGATGAAAAAATTCAACAGAAAGGATTTCAAACAGTGTGAACTAAAGCCAGTCGAAAAAGAATTGTCGAAACC TTTGCCAGGAGTCCCCATTCATTTTAACTATGGCGTG TTTTTTGATGACGGTTACGATTACATGCAACATCTCAAATCTGCTGATACCAAAGAAGCTTATGTTATATCTGTAATACCTGAAGATTGCGCCAGCAATG CTTCCAGTCATTCTGACTCATCTAGAATACGTGAACCTGAAGTTGATTACGATGAGCACATTATTAGTGACCTTAATATGGATTCAGAAGCCGAGTCTTTCGACACGGGAAGTGAATTAGA GGATAACTTTGTAGAACTTGCAGGTGGCCACAGTGTAAAATCCTCAG AAATCGATAGTGATAACGCCAAAGTGGCTGGGGACACCAATTCATTAAATGCANAGGCAACAGAAACAGATATCTCAAGGGTTTCTAAAGATAAAGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD169444             [                                                                                   AGTAATATTTCAGCTTACACGTTCGTCCCATCTCGCTCTTGCTAACAAATCAGCTGGTCTTTCATGATGAAAAAATTCAACAGAAAGGATTTCAAACAGTGTGAACTAAAGCCAGTCGAAAAAGAATTGTCGAAACC TTTGCCAGGAGTCCCCATTCATTTTAACTATGGCGTG TTTTTTGATGACGGTTACGACTACATGCAACATCTCAAATCTGCTGATACCAAAGAAGCTTATGTTATATCTGTAATACCTGAAGATTGCGCCAGCAATG CTTCCAGTCATTCTGACTCATCTAGGATACGTGAACCTGAAGTTGATTACGATGAGCACATTATTAGTGACCTTAATATGGATTCAGAAGCCGAGTCTTTCGACACGGGGAGTGAATTAGA GGATAACTTTGTAGAACTTGCAGGTGGCCACAGTGTAAAATCCTCAG AAATCGATAGTGATAGCGCCAAAGTGGCTGGGGACACCAATTCATTAAATGCAAAGGCAACAGAAACAGATATCTCAAGGGTTTCTAAAGATAAAGTTGCACTCA TGGAACGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL SMT14450             [                                                                                                                            CTAACAAATCAGCTGGTCTTTCATGATGAAAAAATTCAACAGAAAGGNTTTCAAACAGTGTGAACTAAAGCCAGTCGAAAAAGAATTGTCGAAACC TTTGCCAGGNGTCCCCATTCATTTTAACTATGGCGTG TTTTTTGATGACGGTTACGACTACATGCAACATCTCAAATCTGCTGATACCAAAGAAGCTTATGTTATATCTGTAATACCTGANGATTGCGCCA NAATGACTTCCAGTCATTCTGACTCATCTAGAATACGTGAACCTGAAGTTGATTACGATGAGCACATTATTAGTGACCTTAATATGGATTCAGAAGCCGAGTCTTTCGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL SMT14415             [                                                                                                                             TAACAAATCAGCTGGTCTTTCATGATGAAAAAATTCAACAGAAAGGATTTCAAACAGTGTG NCTAAACNCAGTCGAAAAANAATTGTCGAAACCNTTTG CAGGNG NCCCATTCATTTTAACTATGGGGTG TTTTTTGATG CGGTTACGACTACATGCAACATCTCAAATCTGCTGATACCAAAGAAGCTTATGTTATATCTGTAATc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD153172             [                                                                                                                                     CAGCTGGTCTTTCATGATGAAAAAATTCAACAGAAAGGATTTCAAACAGTGTGAACTAAAGCCAGTCGAAAAAGAATTGTCGAAACC TTTGCCAGGAGTCCCCATTCATTTTAACTATGGCGTG TTTTTTGATGACGGTTACGACTACATGCAACATCTCAAATCTGCTGATACCAAAGAAGCTTATGTTATATCTGTAATACCTGAAGATTGCGCCAGCAATG CTTCCAGTCATTCTGACTCATCTAGAATACGTGAACCTGAAGTTGATTACGATGAGCACATTATTAGTGACCTTAATATGGATTCAGAAGCCGAGTCTTTCGACACGGGGAGTGAATTAGA GGATAACTTTGTAGAACTTGCAGGTGGCCACAGTGTAAAATCCTCAG AAATCGATAGTGATAGCGCCAAAGTGGCTGGGGACGCCAATTCATTAAATGCAAAGGCAACAGAAACAGATATCTCAAGGGTTTCTAAAGATAAAGTTGCACTCA TGGAACGTTTTCTTTACGGTGCCAACGAAAATTCAGAAGACATCACAACTTCGAGCTCCGGTCAGTTTACCAAGG ATTACGGAATCGATGACTACTCAGATGACTCAACCTCCTTGAATAAAGAGTTCGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD153333             [                                                                                                                                     CAGCTGGTCTTTCATGATGAAAAAATTCAACAGAAAGGATTTCAAACAGTGTGAACTAAAGCCAGTCGAAAAAGAATTGTCGAAACC TTTGCCAGGAGTCCCCATTCATTTTAACTATGGCGTG TTTTTTGATGACGGTTACGACTACATGCAACATCTCAAATCTGCTGATACCAAAGAAGCTTATGTTATATCTGTAATACCTGAAGATTGCGCCAGCAATG CTTCCAGTCATTCTGACTCATCTAGAATACGTGAACCTGAAGTTGACTACGATGAGCACATTATTAGTGACCTTAATATGGATTCAGAAGCCGAGTCTTTCGACACGGGGAGTGAATTAGA GGATAACTTTGTAGAACTTGCAGGTGGCCACAGTGTAAAATCCTCAG AAATCGATAGTGATAGCGCCAAAGTGGCTGGGGACACCAATTCATTAAATGCAAAGGCAACAGAAACAGATATCTCAAGGGTTTCTAAAGATAAAGTTGCACTCA TGGAACGTTTTCTTTACGGTGCCAACGAAAATTCAGAAGACATCACAACTTCGAGCTCCGGTCAGTTTACCAAGGNATTACGG ATCGATGACTACTCAGATGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL BG931425             [                                                                                                                                                                          GATTTCAAACAGTGTGAACTAAAGCCAGTCGAAAAAGAATTGTCGAAACC TTTGCCAGGAGTCCCCATTCATTTTAACTATGGCGTGTTTTTTTGATGACGGTTACGACTACATGCAACATCTCAAATCTGCTGATACCAAAGAAGCTTATGTTATATCTGTAATACCTGAAGATTGCGCCAGCAATG CTTCCAGTCATTCTGACTCATCTAGAATACGTGAg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD153067             [                                                                                                                                                                                                                                                                            GACGGGTACGACTACATGCAACATCTCAAATCTGCTGATACCAAGGAAGCTTATGTTATATCTGTAATACCTGAAGATTGCGCCAGCAATG CTTCCAGTCATTCTGACTCATCTAGAATGCGTGAACCTGAAGTTGATTACGATGAGCACATTATTAGTGACCTTAATATGGATTCAGAAGCCGAGTCTTTCGACACGGGGAGTGAATTAGA GGATAACTTTGTAGAACTTGCAGGTGGCCACAGTGTAAAATCCTCAG AAATCGATAGTGATAGCGCCAAAGTGGCTGGGGACACCAATTCATTAAATGCAAAGGCAACAGAAACAGATATCTCAAGGGTTTCTAAAGATAAAGTTGCACTCA TGGAACGTTTTCTTTACGGTGCCAACGAAAATTCAGAAGACATCACAACTTCGAGCTCCGGTCAGTTTACCAAGG ATTACGGAATCGATGACTACTCAGATGACTCAACCTCCTTGAATAAAGAGTTCGAAAAGTTAATGTTACGATTCAGATCTCGGTCAAGTTGCAGTCAGACTTTAGTCTCCTGG ACATCGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD153236             [                                                                                                                                                                                                                                                                            GACGGTTACGACTACATGCAACATCTCAAATCTGCTGATACCAAAGAAGCTTATGTTATATCTGTAATACCTGAAGATTGCGCCAGCAATG CTTCCAGTCATTCTGACTCATCTAGAATACGTGAACCTGAAGTTGATTACGATGAGCACATTATTAGTGACCTTAATATGGATTCAGAAGCCGAGTCTTTCGACACGGGGAGTGAATTAGA GGATAACTTTGTAGAACTTGCAGGTGGCCACAGTGTAAAATCCTCAG AAATCGATAGTGATAGCGCCAAAGTGGCTGGGGACACCAATTCATTAAATGCAAAGGCAACAGAAACAGATATCTCAAGGGTTTCTAGAGATAAAGTTGCACTCA TGGAACGTTTTCTTTACGGTGCCAACGAAAATTCAGAAGACATCACAACTTCGAGCTCCGGTCAGTTTACCAAGG ATTACGGAATCGATGACTACTCAGATGACTCAACCTCCTTGAATAAAGAGTTCGAAAAGTTAATGTTACGATTCAGATCTCGGTCAAGTTGCAGTCAGTCTTTAGTCT CTGGAACATCGGTGATGAGCGAAGGCTTG AATATGCTCTTGGTCGTGACATAGCGATCGCT AAAAGGACGT AAACAAGACGCTAC GA TNTGATGATGATCTAAAAG CATANCANTT  AAAAAGCTTCGAATag                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD128979             [                                                                                                                                                                                                                                                                                               AACATTTTAAATCTGCTGATACCAAAGAAGC CCTGTTATATNTGTAATACCTGAAGATTGCGCCAGCAATG CTTCCAGTCATTCTGACTCATCTAGAATACGTGAACCTGAAGTTGATTACGATGAGCACATTATTAGTGACCTTAATATGGATTCATAAGCCGAGTCTTTCGACACGGGGAGTGAATTAGA GGATAACTTTGTAGAACTTGCAGGTGGCCACAGTGTAAAATCCTCAG AAATCGATAGTGATAGCGCCAAAGTGGCTGGGGACACCAATTCATTAAATGCAAAGGCAACAGAAACAGATATCTCAAGGGTTTCTAAAGATAAAGTTGCACTCA TGGAACGTTTTCTTTACGGTGCCAACGAAAATTCAGAAGACATCACAACTTCGAGCTCCGGTCAGTTTACCAAGG ATTACGGAATCGATGACTACTCAGATGACTCAACCTCCTTGAATAAAGAGTTCGAAAAGTTAATGTTACGATTCAGATCTCGGTCAAGTTGCAGTCAGTCTTTAGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD118695             [                                                                                                                                                                                                                                                                                                                                                                AGCAATG CTTCCAGTCATTCTGACTCATCTAGAATACGTGAACCTGAAGTTGATTACGATGAGCACA TATTAGTGACCTTAATATGGATTCAGAAGCCGAGTCTTTCGACACGGGAAGTGAATTAGA GGATAACTTTGTAGAACTTGCAGGTGGCCACAGTGTAAAATCCTCAG AAATCGATAGTGATAACGCCAAAGTGGCTGGGGACACCAATTCATTAAATGCAAAGGCAACAGAAACAGATATCTCAAGGGTTTCTAAAGATAAAGTTGCACTCA TGGAACGTTTTCTTTACGGTGCCAACGAAAATTCAGAAGACATCACAACTTCGAGCTCCGGTCAGTTTACCAAGG ATTACGGAATCGATGACTACTCAGATGACTCAACCTCCTTGAATAAAGAGTTCGAAAAGTTAATGTTACGATTCAGATCTCGGTCAAGTTGCAGTCAGTCTTTAGTCT CTGGAACATCGGTGATGAGCGAAGGCTTGAAATATGCTCTTGGTCGTGACATAGCGATCGCTAAAAAGGACGT At                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD118564             [                                                                                                                                                                                                                                                                                                                                                                AGCAATG CTTCCAGTCATTCTGACTCATCTAGAATACGTGAACCTGAAGTTGATTACGATGAGCACATTATTAGTGACCTTAATATGGATTCAGAAGCCGAGTCTTTCGACACGGGAAGTGAATTAGA GGATAACTTTGTAGAACTTGCAGGTGGCCACAGTGTAAAATCCTCAG AAATCGATAGTGATAACGCCAAAGTGGCTGGGGACACCAATTCATTAAATGCAAAGGCAACAGAAACAGATATCTCAAGGGTTTCTAAAGATAAAGTTGCACTCA TGGAACGTTTTCTTTACGGTGCCAACGAAAATTCAGAAGACATCACAACTTCGAGCTCCGGTCAGTTTACCAAGG ATTACGGAATCGATGACTACTCAGATGACTCAACCTCCTTGAATAAAGAGTTCGAAAAGTTAATGTTACGATTCAGATCTCGGTCAAGTTGCAGTCAGTCTTTAGTCT CTGGAACATCGGTGATGAGCGAAGGCTTG AATATGCTCTTGGTCGTGACATGGCGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD145422             [                                                                                                                                                                                                                                                                                                                                                                        tTTCCAGTCATT GGACTCATTTAGAAAACGTGACCTTGAAGTTGATTACGATGAGCACCTTA TAGTGGACTTAATATGGATTCAGAAGCCGAGTCTTTCGACACGGAAAGTGAA TAGAGGGGTAACTTTGTAGAACTTGCAGGTGGCCACAGTGT AAATCCTCAG AAATCGATAGTGATAACGCCAAAGTGGCTGGGGACACCAATTCATTAAATGCAAAGGCAACAGAAACAGATATCTCAAGGGTTTCTAAAGATAAAGTTGCACTCA TGGAACGTTTTCTTTACGGTGCCAACGAAAATTCAGAAGACATCACAACTTCGAGCTCCGGTCAGTTTACCAAGG ATTACGGAATCGATGACTACTCAGATGACTCAACCTCCTTGAATAAAGAGTTCGAAAAGTTAATGTTACGATTCAGATCTCGGTCAAGTTGCAGTCAGTCTTTAGTCT CTGGAACATCGGTGATGAGCGAAGGCTTGAAATATGCTCTTGGTCGTGACATAGCGATCGCTAAAAAGGACGTAAAACAAGACCGTACGGATTTTGATGATGATCTAAAAGCCATAACAATTAAAAAAAGCTTCGAATTAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD202180             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GATAACTTTGTAGAACTTGCAGGTGGCCACAGTGCAAAATCCTCAG AAATCGATAGTGATAACGCCAAAATGGCTGGGGACACCAATTCATTAAATGCAAAGGCAACATGAACAGATATCTCAAGGGTTTCTAAAGATAAAGTTGCACTCA TGGAACGTTTTCTTTACGGTGCCAACGAAAATTCAGAAGACATCACAACTTCGAGCTCCGGTCAGTTTACCAAGG ATTACGGAATCGATGACTACTCAGATGACTCAACCTCCTTGAATAAAGAGCTCGAAAAGTTAATGTTACGATTCAGATCTCGGTCAAGTTGCAGTCAGTCTTTAGTCT CTGGAACATCGGTGATGAGCGAAGGCTTGAAATATGCTCTTGGTCGTGACATAGCGATCGCTAAAAAGGACGTAAAACAAGACCGTACGGATTTTGATGATGATCTAAAAGCCATAACAATTAAAAAAAGCTTCGAATTAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD136554             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCAGAAAATCGATAGTGATAACGNCAAAGTGGCTGGGGACACCAATTCATTAAATGCAAAGGCAACAGAAACAGATATCTCAAGGGTTTCTAAAGATAAAGTTGCACTCA TGGAACGTTTTCTTTACGGTGCCAACGAAAATTCAGAAGACATCACAACTTCGAGCTCCGGTCAGTTTACCAAGG ATTACGGAATCGATGACTACTCAGATGACTCAACCTCCTTGAATAAAGAGTTCGAAAAGTTAATGTTACGATTCAGATCTCGGTCAAGTTGCAGTCAGTCTTTAGTCT CTGGAACATCGGTGATGAGCGAAGGCTTGAAATATGCTCTTGGTCGTGACATAGCGATCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD200682             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CATTAAATGCAAAGGCAACAGAAACAGATATCTCAAGGGTTTCTAAAGATAAAGTTGCACTCA TGGAACGTTTTCTATACGGTGCCAACGAAAATTCAGAAGACATCACAACTTCGAGCTCCGGTCAGTTTACCAAGG ATTACGGAATCGATGACTACTCAGATGACTCAACCTCCTTGAATAAAGAGTTCGAAAAGTTAATGTTACGATTCAGATCTCGGTCAAGTTGCAGTCAGTCTTTAGTCT CTGGAACATCGGTGATGAGCGAAGGCTTGAAATATGCTCTTGGTCGTGACATAGCGATCGCTAAAAAGGACGT AAACAAGACCGTACGGATTTTGATGATGATCTAAAAGCCATAACAATTAAAAAAAGCTTCGAATTAAGTGGAGTGGATCAACAAGAAGACAGTGGAAGCGATTCCACATATGACGGAGAAAACACTGAACGAATGACCATGTCATGTTCTAATAGTAATTCGAACTTGTATGTTATGAAGCAAAACCAT                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD077844             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              gAGCGCTTCCACATATGACGGAGAAAACACTGAACGAATGACCATGTCATGTTCTAATAGTAATTCGAACTTGTATGTTATGAAGCAAAACCATCTAACAATGCCCAGCTCTAGTAAGACGATAAAGAAGTCATCCACAAAGGGAGGTTCTCAAAACAACGATGGCATTATTGAATTTTCAAAACCACTAGACCCTGGGTTACTAGTGAGAGAAAAGGGAGAGTCTATGGAACAAAAGCGCTTACGTAAAGCCACTATCAAGGAACACCGCCAACTGCGACGAAAGATACGTAAGATCAACCAGTTAAACTTCCGTCAGGAGAAAGAAAGACANATAAAAAACAACATGCAAACGATGATAGTCCACTAGCTAAAGTTACTGTGATATTTGGTTGTACAGAATAAATCACCA]




>consensus_10692#0
CCCCGAGGCCAAAAATTCGGCACGAGGAGAACTGTGACGGTAATGGTGTGGTCCATTTGA
GGGGTTGTATTGGCTGTCATTTTAGTAATATTTCAGCTTACACGTTCGTCCCATCTCGCT
CTTGCTAACAAATCAGCTGGTCTTTCATGATGAAAAAATTCAACAGAAAGGATTTCAAAC
AGTGTGAACTAAAGCCAGTCGAAAAAGAATTGTCGAAACCTTTGCCAGGAGTCCCCATTC
ATTTTAACTATGGCGTGTTTTTTGATGACGGTTACGACTACATGCAACATCTCAAATCTG
CTGATACCAAAGAAGCTTATGTTATATCTGTAATACCTGAAGATTGCGCCAGCAATGCTT
CCAGTCATTCTGACTCATCTAGAATACGTGAACCTGAAGTTGATTACGATGAGCACATTA
TTAGTGACCTTAATATGGATTCAGAAGCCGAGTCTTTCGACACGGGGAGTGAATTAGAGG
ATAACTTTGTAGAACTTGCAGGTGGCCACAGTGTAAAATCCTCAGAAATCGATAGTGATA
ACGCCAAAGTGGCTGGGGACACCAATTCATTAAATGCAAAGGCAACAGAAACAGATATCT
CAAGGGTTTCTAAAGATAAAGTTGCACTCATGGAACGTTTTCTTTACGGTGCCAACGAAA
ATTCAGAAGACATCACAACTTCGAGCTCCGGTCAGTTTACCAAGGATTACGGAATCGATG
ACTACTCAGATGACTCAACCTCCTTGAATAAAGAGTTCGAAAAGTTAATGTTACGATTCA
GATCTCGGTCAAGTTGCAGTCAGTCTTTAGTCTCTGGAACATCGGTGATGAGCGAAGGCT
TGAAATATGCTCTTGGTCGTGACATAGCGATCGCTAAAAAGGACGTAAACAAGACCGTAC
GGATTTTGATGATGATCTAAAAGCCATAACAATTAAAAAAAGCTTCGAATTAAGTGGAGT
GGATCAACAAGAAGACAGTGGAAGCGATTCCACATATGACGGAGAAAACACTGAACGAAT
GACCATGTCATGTTCTAATAGTAATTCGAACTTGTATGTTATGAAGCAAAACCATCTAAC
AATGCCCAGCTCTAGTAAGACGATAAAGAAGTCATCCACAAAGGGAGGTTCTCAAAACAA
CGATGGCATTATTGAATTTTCAAAACCACTAGACCCTGGGTTACTAGTGAGAGAAAAGGG
AGAGTCTATGGAACAAAAGCGCTTACGTAAAGCCACTATCAAGGAACACCGCCAACTGCG
ACGAAAGATACGTAAGATCAACCAGTTAAACTTCCGTCAGGAGAAAGAAAGACANATAAA
AAACAACATGCAAACGATGATAGTCCACTAGCTAAAGTTACTGTGATATTTGGTTGTACA
GAATAAATCACCA

consensusID : consensus_10692#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 382
fasta sequence

                              [TTAGTTTTATTATAGGTGTCCTCATCAATGGGCGTCCACGACACCACAAAATATCCAACTCAGGACCTTCTAGCCTCTCGGCGAGCTCTTAACTTTTCTGCCAATGAGTTAGCATTCAGTAACCTACATTTCCAACTTCGGTCAACTCACGATCATCATCCAGTGCAATCGGTGATATTTGTCCCACACCTAGCAGTTTTTCAAAATGTTATATCAGCGCTAATAAATGTTAACCCACCAACTCATATCCGTAACTAGTGTATTTTCTTAAAGTGAAACGCTTCTTTGGTACTGTTTGCATCACAAAAACGCATCCAGACTAATAAAAATAAGAAAAATGCTTACTATTAGAACATGACATGGTCATTCGTTCAGTGTTTTC]

[+] EMBL CD187122             [TTAGTTTTATTATAGGTGTCCTCATCAATGGGCGTCCACGACACCACAAAATATCCAACTCAGGACCTTCTAGCCTCTCGGCGAGCTCTTAACTTTTCTGCCAATGAGTTAGCATTCAGTAACCTACATTTCCAACTTCGGTCAACTCACGATCATCATCCAGTGCAATCGGTGATATTTGTCCCACACCTAGCAGTTTTTCAAAATGTTATATCAGCGCTAATAAATGTTAACCCACCAACTCATATCCGTAACTAGTGTATTTTCTTAAAGTGAAACGCTTCTTTGGTACTGTTTGCATCACAAAAACGCATCCAGACTAATAAAAATAAGAAAAATGCTTACTATTAGAACATGACATGGTCATTCGTTCAGTGTTTTC]




>consensus_10692#1
TTAGTTTTATTATAGGTGTCCTCATCAATGGGCGTCCACGACACCACAAAATATCCAACT
CAGGACCTTCTAGCCTCTCGGCGAGCTCTTAACTTTTCTGCCAATGAGTTAGCATTCAGT
AACCTACATTTCCAACTTCGGTCAACTCACGATCATCATCCAGTGCAATCGGTGATATTT
GTCCCACACCTAGCAGTTTTTCAAAATGTTATATCAGCGCTAATAAATGTTAACCCACCA
ACTCATATCCGTAACTAGTGTATTTTCTTAAAGTGAAACGCTTCTTTGGTACTGTTTGCA
TCACAAAAACGCATCCAGACTAATAAAAATAAGAAAAATGCTTACTATTAGAACATGACA
TGGTCATTCGTTCAGTGTTTTC

consensusID : consensus_10692#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 217
fasta sequence

                              [GACGGTTACAACTACATCCAATATAAAAGTGGGCNNNCNNCCAAAAAAACCTTATGTTATATCTGAAACACCTGAAATATGGCGCCCAAAATTGCTCCCAGCCATTCAGACATCATCAAAAGACGTGAACCTGAAGTTGATTACGATGAGCACATTATTAGTGACCTTAATATGGATTCAGAAGCCGAGTCTTTCGACACGGGGAGTGAATTAGAGG]

[+] EMBL CD153473             [GACGGTTACAACTACATCCAATATAAAAGTGGGCNNNCNNCCAAAAAAACCTTATGTTATATCTGAAACACCTGAAATATGGCGCCCAAAATTGCTCCCAGCCATTCAGACATCATCAAAAGACGTGAACCTGAAGTTGATTACGATGAGCACATTATTAGTGACCTTAATATGGATTCAGAAGCCGAGTCTTTCGACACGGGGAGTGAATTAGAGG]




>consensus_10692#2
GACGGTTACAACTACATCCAATATAAAAGTGGGCNNNCNNCCAAAAAAACCTTATGTTAT
ATCTGAAACACCTGAAATATGGCGCCCAAAATTGCTCCCAGCCATTCAGACATCATCAAA
AGACGTGAACCTGAAGTTGATTACGATGAGCACATTATTAGTGACCTTAATATGGATTCA
GAAGCCGAGTCTTTCGACACGGGGAGTGAATTAGAGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10692#0      CCCCGAGGCCAAAAATTCGGCACGAGGAGAACTGTGACGGTAATGGTGTGGTCCATTTGA 60
consensus_10692#2      ------------------------------------------------------------
consensus_10692#1      ------------------------------------------------------------
                                                                                   

consensus_10692#0      GGGGTTGTATTGGCTGTCATTTTAGTAATATTTCAGCTTACACGTTCGTCCCATCTCGCT 120
consensus_10692#2      ------------------------------------------------------------
consensus_10692#1      ------------------------------------------------------------
                                                                                   

consensus_10692#0      CTTGCTAACAAATCAGCTGGTCTTTCATGATGAAAAAATTCAACAGAAAGGATTTCAAAC 180
consensus_10692#2      ------------------------------------------------------------
consensus_10692#1      ------------------------------------------------------------
                                                                                   

consensus_10692#0      AGTGTGAACTAAAGCCAGTCGAAAAAGAATTGTCGAAACCTTTGCCAGGAGTCCCCATTC 240
consensus_10692#2      ------------------------------------------------------------
consensus_10692#1      ---------------------------------------------------------TTA 3
                                                                                   

consensus_10692#0      ATTTTAACTATGGCGTGTTTTTTGATGA-CGGTTACGACTACATGCAACATCTCAAATCT 299
consensus_10692#2      --------------------------GA-CGGTTACAACTACATCCAATATAA-AAGTGG 32
consensus_10692#1      GTTTTATTATAGGTGTCCTCATCAATGGGCGTCCACGACACCACAAAATATCC-AACTCA 62
                                                 *  **   ** **  **   ** **   ** *  

consensus_10692#0      GCTGATACC--AAAGAAGCTTATGTTATATCTGTAATACCTGAAG-ATTGCGCCAGCAAT 356
consensus_10692#2      GCNNNCNNCCAAAAAAACCTTATGTTATATCTGAAACACCTGAAATATGGCGCCCAAAAT 92
consensus_10692#1      GGACCTTCT------AGCCTCTCGGCGAGCTCTTAACTTTTCTGCCAATGAGTTAGCATT 116
                       *              *  **   *          **    *     *  * *     * *

consensus_10692#0      --GCTTCCAGTCATTCTGACTCATCTAGAATACGTGAACCTGAAGTTGATTACGATGAGC 414
consensus_10692#2      T-GCTCCCAGCCATTCAGACATCATCAAAAGACGTGAACCTGAAGTTGATTACGATGAGC 151
consensus_10692#1      CAGTAACCTACATTTCCAACTTCGGTC-AACTCACGATCATCA--TCCAGTGCAATCGGT 173
                         *   **     ***  **        **  *  ** * * *  *  * * * **  * 

consensus_10692#0      -ACATTATTAGTGACCTTAATATGGATTCAGAAGCCGAGTCTTTCGACACGGGGAGTGAA 473
consensus_10692#2      -ACATTATTAGTGACCTTAATATGGATTCAGAAGCCGAGTCTTTCGACACGGGGAGTGAA 210
consensus_10692#1      GATATTTGTCCCACACCTAGCAGTTTTTCAAAATGTTATATCAGCGCTAATAAATGTTAA 233
                        * ***  *      * **  *    **** **    *      **  *      ** **

consensus_10692#0      TTAGAGGATAACTTTGTAGAACTTGCAGGTGGCCACAGTGTAAAATCCTCAGAAATCGAT 533
consensus_10692#2      TTAGAGG----------------------------------------------------- 217
consensus_10692#1      CCCACCAACTCATATCCGTAACTAGTGTATTTTCTTAAAGTGAAACGCTTCTTTGGTACT 293
                                                                                   

consensus_10692#0      AGTGATAACGCCAAAGTGGCTGGGGACACCAATTCATTAAATGCAAAGGCAACAGAAACA 593
consensus_10692#2      ------------------------------------------------------------
consensus_10692#1      GTTTGCATCACAAAAACGCATCCAGACTAATAAAAATAAGAAAAATGCTTACTATTAGAA 353
                                                                                   

consensus_10692#0      GATATCTCAAGGGTTTCTAAAGATAAAGTTGCACTCATGGAACGTTTTCTTTACGGTGCC 653
consensus_10692#2      ------------------------------------------------------------
consensus_10692#1      CATGACATGGTCATTCGTTCAGTGTTTTC------------------------------- 382
                                                                                   

consensus_10692#0      AACGAAAATTCAGAAGACATCACAACTTCGAGCTCCGGTCAGTTTACCAAGGATTACGGA 713
consensus_10692#2      ------------------------------------------------------------
consensus_10692#1      ------------------------------------------------------------
                                                                                   

consensus_10692#0      ATCGATGACTACTCAGATGACTCAACCTCCTTGAATAAAGAGTTCGAAAAGTTAATGTTA 773
consensus_10692#2      ------------------------------------------------------------
consensus_10692#1      ------------------------------------------------------------
                                                                                   

consensus_10692#0      CGATTCAGATCTCGGTCAAGTTGCAGTCAGTCTTTAGTCTCTGGAACATCGGTGATGAGC 833
consensus_10692#2      ------------------------------------------------------------
consensus_10692#1      ------------------------------------------------------------
                                                                                   

consensus_10692#0      GAAGGCTTGAAATATGCTCTTGGTCGTGACATAGCGATCGCTAAAAAGGACGTAAACAAG 893
consensus_10692#2      ------------------------------------------------------------
consensus_10692#1      ------------------------------------------------------------
                                                                                   

consensus_10692#0      ACCGTACGGATTTTGATGATGATCTAAAAGCCATAACAATTAAAAAAAGCTTCGAATTAA 953
consensus_10692#2      ------------------------------------------------------------
consensus_10692#1      ------------------------------------------------------------
                                                                                   

consensus_10692#0      GTGGAGTGGATCAACAAGAAGACAGTGGAAGCGATTCCACATATGACGGAGAAAACACTG 1013
consensus_10692#2      ------------------------------------------------------------
consensus_10692#1      ------------------------------------------------------------
                                                                                   

consensus_10692#0      AACGAATGACCATGTCATGTTCTAATAGTAATTCGAACTTGTATGTTATGAAGCAAAACC 1073
consensus_10692#2      ------------------------------------------------------------
consensus_10692#1      ------------------------------------------------------------
                                                                                   

consensus_10692#0      ATCTAACAATGCCCAGCTCTAGTAAGACGATAAAGAAGTCATCCACAAAGGGAGGTTCTC 1133
consensus_10692#2      ------------------------------------------------------------
consensus_10692#1      ------------------------------------------------------------
                                                                                   

consensus_10692#0      AAAACAACGATGGCATTATTGAATTTTCAAAACCACTAGACCCTGGGTTACTAGTGAGAG 1193
consensus_10692#2      ------------------------------------------------------------
consensus_10692#1      ------------------------------------------------------------
                                                                                   

consensus_10692#0      AAAAGGGAGAGTCTATGGAACAAAAGCGCTTACGTAAAGCCACTATCAAGGAACACCGCC 1253
consensus_10692#2      ------------------------------------------------------------
consensus_10692#1      ------------------------------------------------------------
                                                                                   

consensus_10692#0      AACTGCGACGAAAGATACGTAAGATCAACCAGTTAAACTTCCGTCAGGAGAAAGAAAGAC 1313
consensus_10692#2      ------------------------------------------------------------
consensus_10692#1      ------------------------------------------------------------
                                                                                   

consensus_10692#0      ANATAAAAAACAACATGCAAACGATGATAGTCCACTAGCTAAAGTTACTGTGATATTTGG 1373
consensus_10692#2      ------------------------------------------------------------
consensus_10692#1      ------------------------------------------------------------
                                                                                   

consensus_10692#0      TTGTACAGAATAAATCACCA 1393
consensus_10692#2      --------------------
consensus_10692#1      --------------------