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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10705#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 494 fasta sequence
[ACCATTCATCCAATCAAAATCTGTCACTAGCGAATTATACAGAAAAGAACATTATCAACCAAATATTGATTGAATTACGCGAGCATATTACTTGCCATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG-AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT-AAAGTTTT-ATCGATCATTAATAAATTCGATTCTTTGGAATGG--AAATCA]
[-] EMBL CD064026 [ACCATTCATCCAATCAAAATCTGTCACTAGCGAATTATACAGAAAAGAACATTATCAACCAAATATTGATTGAATTACGCGAGCATATTACTTGCCATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCTATTATCACCTTCAT AATACATACAAT ]
[+] EMBL CD126006 [ CATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATGG AAATC ]
[+] EMBL CD125994 [ CATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATGG AAATC ]
[+] EMBL CD125969 [ CATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATGG AAATC ]
[+] EMBL CD125979 [ CATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCGCGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATGG AAATC ]
[+] EMBL CD125906 [ CATTGTTTAAAGGTTATATTGTATGGTATAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATGG AAATC ]
[+] EMBL CD126037 [ CATTGTTT AGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATGG AAATC ]
[+] EMBL CD062920 [ CATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGAGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATGG AAATC ]
[-] EMBL CD126125 [ ATTGTTTAAAGGTTATATTGTATGGTAAAGTTGAACAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATG AATC ]
[-] EMBL CD125963 [ ATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCTATTCTTTGGAATGG AAt ]
[-] EMBL CD126122 [ ATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATGATCAAAATTGTTGGTAACAAAAAATCAGTCAAGTCAAACATATCATGTTGTTACACCCC ATCACTTTCCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATG AATC ]
[-] EMBL CD126081 [ ATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGCTTACAGTCATATATTCATTTACTGTCGCAATTGTCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCGAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCA TAATAAATTCGATTCTTTGGAATGG AA ]
[-] EMBL CD125985 [ ATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTGCAAT CTGGTTGGGAATATAGct ]
[-] EMBL CD125882 [ ATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATGG AATCA]
[-] EMBL CD126079 [ ATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTG ]
[+] EMBL CD126061 [ TTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACAGGTGAGATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATGTAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATGG AAATC ]
[+] EMBL CD126180 [ atgTTAAAGGTTATATTGTATGGTAAAG TGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATGG AAATC ]
[-] EMBL CD125898 [ GAATGACTATAGAATTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTCGGAATGG AAATCA]
[+] EMBL CD126080 [ ATGTTG AATATACTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTACTT AAAGTCTT ATCGATCATTAATAAATTCGATACTTTGGAATTGCCAAATC ]
[+] EMBL CD125993 [ AGTCAAATCAAACATATCATGTTGTTACGCCCCAATCACTTTTCAACTGTCCTTGTATGAGTGATCTAGTTAAAAGTTTTCATCGATCATTAATAAATTCGATTCTTTGGAATGG AAATC ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||