cluster # 10724

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Schistosoma mansoni
cluster # 10724 cluster # 10724 Sequences # 20 consensus # 7

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10724#0 length = 536 sequences # 4
consensus_10724#1 length = 535 sequences # 3
consensus_10724#2 length = 437 sequences # 2

consensus_10724#3 length = 396 sequences # 2
consensus_10724#4 length = 306 sequences # 4
consensus_10724#5 length = 216 sequences # 4
consensus_10724#6 length = 152 sequences # 1

consensusID : consensus_10724#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 536
fasta sequence

                              [TTTCACCGTAGACCTGAAAGCGCTCCAAATGTCCACTTCCAGATAGTACAAAAAGAGTGTTTCAAACCTGCTCTATGAAAGGGAATGTTCAACACTGGGACTTCAATTGAAACATCCCAAAGCAGTTTCTGAGAATGCTTCTGTCTAGAGTTTACATGAAGACATTCCCGTTTCCAACGAAATCCTCAAAGCTATCCAAATATCCTCTTGCAGATTTTACAAAAAGTGTGTTTCAGAACTGCTCTATCAAAACAAAGGTTCAACACTGTCAGTTGAGGGCACACATCACAAATAAGTTTCTGAGAATGCTTCTGTCTAGTTTTCATGGGAAGATATTTCCTTTTTCACCATAGGCCTGAAAGCGATCCAAATGTCCACATCCACATACTACAAAAAGAGTGTTTCAAACCTGCTCTATGAAAGGGAATGCTCAAC-TCTGTGAATTGAATGCAGACATCACAAAGAAGTTTCTGAGAATGCTGCTGTCTCCTTTTTATATGTAATCCCGTTTCCAACGAAATCCTCAAAGCTAGCCA]

[+] EMBL CD117055             [TTTCACCGTAGACCTGAAAGCGCTCCAAATGTCCACTTCCAGATAGTACAAAAAGAGTGTTTCAAACCTGCTCTATGAAAGGGAATGTTCAACACTGGGACTTCAATTGAAACATCCCAAAGCAGTTTCTGAGAATGCTTCTGTCTAGAGTTTACATGAAGACATTCCCGTTTCCAACGAAATCCTCAAAGCTATCCAAATATCCTCTTGCAGATTTTACAAAAAGTGTGTTTCAGAACTGCTCTATCAAAACAAAGGTTCAACACTGTCAGTTGAGGGCACACATCACAAATAAGTTTCTGAGAATGCTTCTGTCTAGTTTTCATGGGAAGATATTTCCTTTTTCACCATAGGCCTGAAAGCGATCCAAATGTCCACATCCACATACTACAAAAAGAGTGTTTCAAACCTGCTCTATGAAAGGGAATGtt                                                                                                          ]
[+] EMBL CD152211             [                                                                                                                                                                                                                                                                         CTGTTAGTTGAGGGCACACATCACAAATAAACTTCTGAGAATGCTTCTGTCTAGTTTTTACGGGAAGATATTTCCTTTTTCACCATACGCCTGAAAGAGCTCCAAATGTCCTCATCCAGATACTACAAAAAGAGTGTTTCCAACCTGCTCTATGAAAGGGAATGCTCAAC TCTGTGAATTGAATGCAGACATCACAAAGAAGTTTCTGAGAATGCTGCTGTCTCCTTTTTATATGTAATCCCGTTTCCAACGAAATCCTCAAAGCTAGCC ]
[-] EMBL CD152300             [                                                                                                                                                                                                                                                                                                                                                                                                                                    AAGGGAATGCTCAACTTCTGTGAATTGAATGCAGACATCACAAAGAAGTTTCTGAGAATGCTGCTGTCTCCTTTTTATATGTAATCCCGTTTCCAACGAAATCCTCAAAGCTAGCCA]
[-] EMBL CD152307             [                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAATTGAATGCAGACATCACAAAGAAGTTTCTGAGAATGCTGCTGTCTCCTTTTTATATGTAATCCCGTTTCCAACGAAATCCTCAAAGCTAGCCA]




>consensus_10724#0
TTTCACCGTAGACCTGAAAGCGCTCCAAATGTCCACTTCCAGATAGTACAAAAAGAGTGT
TTCAAACCTGCTCTATGAAAGGGAATGTTCAACACTGGGACTTCAATTGAAACATCCCAA
AGCAGTTTCTGAGAATGCTTCTGTCTAGAGTTTACATGAAGACATTCCCGTTTCCAACGA
AATCCTCAAAGCTATCCAAATATCCTCTTGCAGATTTTACAAAAAGTGTGTTTCAGAACT
GCTCTATCAAAACAAAGGTTCAACACTGTCAGTTGAGGGCACACATCACAAATAAGTTTC
TGAGAATGCTTCTGTCTAGTTTTCATGGGAAGATATTTCCTTTTTCACCATAGGCCTGAA
AGCGATCCAAATGTCCACATCCACATACTACAAAAAGAGTGTTTCAAACCTGCTCTATGA
AAGGGAATGCTCAACTCTGTGAATTGAATGCAGACATCACAAAGAAGTTTCTGAGAATGC
TGCTGTCTCCTTTTTATATGTAATCCCGTTTCCAACGAAATCCTCAAAGCTAGCCA

consensusID : consensus_10724#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 535
fasta sequence

                              [GGTCGATGCTGTGAGAAGAATGAACACATCAAAAAGAAGTTTCTCAGAATGCTTCTGTCTAG-TT-TTTATGTGAAGACATTTCCTTTTTCACCATAGGCCAAAAAGGGATCCCGAATATCCC-TTGTACATTCTA-CAAAAGGACTGTTTCCAAACTGCTCAATCCAAAGACAGATTCAACTCTTTGGGATGAATGTACACATCACAACGAAGTTTCTCAGAAAGCTTCTGTCTAGTTTTTGTGTGAAGATATTTCTTTTTTCACCATAGGCTTCAAAGGGCTCACAAATATCACAAAGCAGATTCTACAAAAAGACTCTATCCAAACTGGTCAATGAAAAGAACACTTGAAATCTGTGAGATGAATGAGCACATCACAAAGAATTTTCTCAGAAAGCTTCTGTCTAATTTTTATGTGAAGATATTTCCATTTTCACCATAGACTTCAAACCGCCTACATATATCCCTTTGCAGATTCTACAAAAAGATTGTCTCCAAACTGCTCAATCAAAGAAAGCTTTCTGCCCTGTGAGATGAG]

[+] EMBL CD068636             [GGTCGATGCTGTGAGAAGAATGAACACATCAAAAAGAAGTTTCTCAGAATGCTTCTGTCTAG TT TTTATGTGAAGACATTTCCTTTTTCACCATAGGCCAAAAAGGGATCCCGAATATCCC TTGTACATTCTA CAAAAGGACTGTTTCCAAACTGCTCAATCCAAAGACAGATTCAACTCTTTGGGATGAATGTACACATCACAACGAAGTTTCTCAGAAAGCTTCTGTCTAGTTTTTGTGTGAAGATATTTCTTTTTTCACCATAGGCTTCAAAGGGCTCACAAATATCACAAAGCAGATTCTACAAAAAGACTCTATCCAAACTGGTCAATGAAAAGAACACTTGAAATCTGTGAGATGAATGAGCACATCACAAAGAATTTTCTCAGAAAGCTTCTGTCTAATTTTTATGTGAAGATATTTCCATTTTCACCATAGACTTCAAACCGCCTACATATATCCCTTTGCAGATTCTACAAAAAGATTGTCTCCAAACTGCTCAATCAAAGAAAGCTTTCTGCCCTGTGAGATGAG]
[+] EMBL CD068681             [   cagTGCTGTGAGAAGAATGAACACATCAAGAAGAAGTTTCTCAGAATGCTTCTGTCTAGATTGTTTATGTGAAGACATTTCCTTTTTCACCATAGGCCAAAAAGGGATCCCGAATATCCCTTTGTACATTCTAGCAAAAGGACTGTTTCCAAACTGCTCAATCCAAAGACAGATTCAACTCTTTGGGATGAATGTACACATCACAACGAAGTTTCTCAGAAAGCTTCTGTCTAGTTTTTGTGTGAAGATATTTCTTTTTTCACCATAGGCTTCAAAGGGCTCACAAATATCACAAAGCAGATTCTACAAAAAGACTCTATCCAAACTGGTCAATGAAAAGAACACTTGAAATCTGTGAGATGAATGAGCACATCACAAAGAATTTTCTCAGAAAGCTTCTGTCTAATTTTTATGTGAAGATATTTCCATTTTCACCATAGACTTCAAACCGCCTACATATATCCCTTTGCAGATTCTACAAAAAGATTGTCTCCAAACTGCTCAATCAAAGAAAGCTTTCTACCCTG         ]
[+] EMBL CD068584             [                                                                                                                                                                                                                                              ctgTGTGTGAAGATATTTCTTTTTTCACCATAGGCTTCAAAGGGCTCACAAATATCACAAAGCAGATTCTACAAAAAGACTCTATCCAAACTGGTCAATGAAAAGAACACTTGAAATCTGTGAGATGAATGAGCACATCACAAAGAATTTTCTCAGAAAGCTTCTGTCTAATTTTTATGTGAAGATATTTCCATTTTCACCATAGACTTCAAACCGCCTACATATATCCCCTTGCAGATT                                                             ]




>consensus_10724#1
GGTCGATGCTGTGAGAAGAATGAACACATCAAAAAGAAGTTTCTCAGAATGCTTCTGTCT
AGTTTTTATGTGAAGACATTTCCTTTTTCACCATAGGCCAAAAAGGGATCCCGAATATCC
CTTGTACATTCTACAAAAGGACTGTTTCCAAACTGCTCAATCCAAAGACAGATTCAACTC
TTTGGGATGAATGTACACATCACAACGAAGTTTCTCAGAAAGCTTCTGTCTAGTTTTTGT
GTGAAGATATTTCTTTTTTCACCATAGGCTTCAAAGGGCTCACAAATATCACAAAGCAGA
TTCTACAAAAAGACTCTATCCAAACTGGTCAATGAAAAGAACACTTGAAATCTGTGAGAT
GAATGAGCACATCACAAAGAATTTTCTCAGAAAGCTTCTGTCTAATTTTTATGTGAAGAT
ATTTCCATTTTCACCATAGACTTCAAACCGCCTACATATATCCCTTTGCAGATTCTACAA
AAAGATTGTCTCCAAACTGCTCAATCAAAGAAAGCTTTCTGCCCTGTGAGATGAG

consensusID : consensus_10724#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 437
fasta sequence

                              [TATATGAAGATATTCCCGTTTCCAAAGAAATCCTGAAATCTATCCAAATATCCCCTCGCAGATTCTACAAAAAGAGTGTTTCAAAACTGCTCTGTAAAAAGAAAGGTTCAACCCTGTTAGTCGAGTACACACATCACAAACAAGTTTCACAGAATGCTTCTTTCTAGCTTGTAGGGGAAGATATTCCCTTTATCACCATGGGCCTCAAACCGTCCGAAACGTCCACTTCCATATACTAAAAAAGGAGTGTTTCAAACCTGCTCTATGAAAGGCAATGTTCAACTCTGTGACTTGAATGCAGACATCACAGAGCAGTTACTGAGAATGCTTCTGTCCAGACTTTATAGGAAGATATTCCCGTTTCCAACGAAATCTTCACAGCTATCCAAATATCCACTTGCAGATAGTACAAAAAGGGTGTATCAAAAATGCTCTGT]

[-] EMBL CD140335             [TATATGAAGATATTCCCGTTTCCAAAGAAATCCTGAAATCTATCCAAATATCCCCTCGCAGATTCTACAAAAAGAGTGTTTCAAAACTGCTCTGTAAAAAGAAAGGTTCAACCCTGTTAGTCGAGTACACACATCACAAACAAGTTTCACAGAATGCTTCTTTCTAGCTTGTAGGGGAAGATATTCCCTTTATCACCATGGGCCTCAAACCGTCCGAAACGTCCACTTCCATATACTAAAAAAGGAGTGTTTCAAACCTGCTCTATGAAAGGCAATGTTCAACTCTGTGACTTGAATGCAGACATCACAGAGCAGTTACTGAGAATGCTTCTGTCCAGACTTTATAGGAAGATATTCCCGTTTCCAACGAAATCTTCACAGCTATCCAAATATCCACTTGCAGATAGTACAAAAAGGGTGTATCAAAAATGCTCTGT]
[+] EMBL CD087504             [                      CAACGAAATCCTGAAATCTATCCAAATATCCTCTCGCAGATTCTACAAAAAGAGTGTTTCAAAACTGCTCTGTAAAAAGAAAGGTTCAACTCTGTTAGTTGAGTACACACATCACAAACAAGTTTCACAGAATGCTTCTTTCTAGCTTGTAAGGGAAGATATTCCCTTTATCACCATGGGCCTCCAACCGTCCGAAACGTCCACTTCCATATACTACAAAAAGAGCGTTTCAAACCTGCTCTATGAAAGGCAATGTTCAACTCTGTGACTTGAATGCAGACATCACAGAGCAGTTTCTGAGAATGCTTCTGTCTAGATTTTATAGGAAGATATTTCCGTTTCCAACGAAATCTTCACAGCTAT                                                    ]




>consensus_10724#2
TATATGAAGATATTCCCGTTTCCAAAGAAATCCTGAAATCTATCCAAATATCCCCTCGCA
GATTCTACAAAAAGAGTGTTTCAAAACTGCTCTGTAAAAAGAAAGGTTCAACCCTGTTAG
TCGAGTACACACATCACAAACAAGTTTCACAGAATGCTTCTTTCTAGCTTGTAGGGGAAG
ATATTCCCTTTATCACCATGGGCCTCAAACCGTCCGAAACGTCCACTTCCATATACTAAA
AAAGGAGTGTTTCAAACCTGCTCTATGAAAGGCAATGTTCAACTCTGTGACTTGAATGCA
GACATCACAGAGCAGTTACTGAGAATGCTTCTGTCCAGACTTTATAGGAAGATATTCCCG
TTTCCAACGAAATCTTCACAGCTATCCAAATATCCACTTGCAGATAGTACAAAAAGGGTG
TATCAAAAATGCTCTGT

consensusID : consensus_10724#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 396
fasta sequence

                              [AGAATGATTCTGTCTGGTTTTCATGGGAAGATAATTCCTTTTCCAACACAAGCCTGAATGCGCTCCAAATGGACACTTCCAGATACGACAAATGAGTGTTTCAAAGCTGTCCTAGGAAAGGGAACGTTCCATTGTGTGACTTGAATGCAAACATCACCAAGTAGTTTCTCAGAACGCTGCTGTCTGCTTTTTATATGTATTCCCGTGTCCAAGGAAATCGTCAAAGCCAGCCAAATATCCACTTGCAGGTTCCACAAAAAGAGTGTTTCAAAACTGCTCTCTCAAAAGACATGTTCAACTCTGTCAGTTGAGGACACACGTCACAAAGAAGTTTGTGAGAATGCTTCTGTCTAGTTTCTATGGGAAGATATCTCCTTTTTCACCATAGGCCTCAAA]

[+] EMBL CD135549             [AGAATGATTCTGTCTGGTTTTCATGGGAAGATAATTCCTTTTCCAACACAAGCCTGAATGCGCTCCAAATGGACACTTCCAGATACGACAAATGAGTGTTTCAAAGCTGTCCTAGGAAAGGGAACGTTCCATTGTGTGACTTGAATGCAAACATCACCAAGTAGTTTCTCAGAACGCTGCTGTCTGCTTTTTATATGTATTCCCGTGTCCAAGGAAATCGTCAAAGCCAGCCAAATATCCACTTGCAGGTTCCACAAAAAGAGTGTTTCAAAACTGCTCTCTCAAAAGACATGTTCAACTCTGTCAGTTGAGGACACACGTCACAAAGAAGTTTGTGAGAATGCTTCTGTCTAGTTTCTATGGGAAGATATCTCCTTTTTCACCATAGGCCTCAA ]
[-] EMBL CD135643             [ GAATGATTCTGTCTGGTTTTCATGGGAAGATAATTCCTTGTCCAACACAAGCCTGAATGCGCTCCAAATGGACACTTCCAGATACGACAAATGAGTGTTTCAAAGCTGTTCTAGGAAAGGGAACGTTCCATTGTGTGACTTGAATGCANACATCACCAAGTAGTTTCTCAGAACGCTGCTGTCTGCTTTTTATATGTATTCCCGTGTCCAAGGAAATCGTCAAAGCCAGCCAAATATCCACTTGCAGGTTCCACAAAAAGAGTGTTTCAAAACTGCTCTCTCAAAAGACGTGTTCAACTCTGTCAGTTGAGGACACACGTCACAAAGAAGTTTGTGAGAATGCTTCTGTCTAGTTTTTATGGGAAGATATTTCCTTTTTCACCATAGGCCTCAAA]




>consensus_10724#3
AGAATGATTCTGTCTGGTTTTCATGGGAAGATAATTCCTTTTCCAACACAAGCCTGAATG
CGCTCCAAATGGACACTTCCAGATACGACAAATGAGTGTTTCAAAGCTGTCCTAGGAAAG
GGAACGTTCCATTGTGTGACTTGAATGCAAACATCACCAAGTAGTTTCTCAGAACGCTGC
TGTCTGCTTTTTATATGTATTCCCGTGTCCAAGGAAATCGTCAAAGCCAGCCAAATATCC
ACTTGCAGGTTCCACAAAAAGAGTGTTTCAAAACTGCTCTCTCAAAAGACATGTTCAACT
CTGTCAGTTGAGGACACACGTCACAAAGAAGTTTGTGAGAATGCTTCTGTCTAGTTTCTA
TGGGAAGATATCTCCTTTTTCACCATAGGCCTCAAA

consensusID : consensus_10724#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 306
fasta sequence

                              [TGTTTCAAAACTGCTCCTTCAAAACGATGGTTCAATCCTGTTAGTTGAGCAAACACATCACAAATAAGTTTCTGAGAATGCTTCCGTCTGGTTTTTATGGGAAGATATTTCCTTTTTCAACATAGGCCTGAAAGCGC-TCCAAATGTCCACT-TCCAGATACTACAAAAAGAGTGTTTCAAATCTACTCTATGAATGGGAATGTTCTACTCTGTGACTTGAACGCAACATCCCAAAGAAGTTTCTGAGAATGTTTCTGTCTAGAGTTTATCTGAAGACATACCCG-TTTCCAACGAAATCCTCAAAGCT]

[+] EMBL CD152212             [TGTTTCAAAACTGCTCCTTCAAAACGATGGTTCAATCCTGTTAGTTGAGCAAACACATCACAAATAAGTNTCTGAGAATGCTTC                                                                                                                                                                                                                                 ]
[-] EMBL CD152306             [ GTTTCAAAACTGCTCCTTCAAAACGATGGTTCAATCCTGTTAGTTGAGCAAACACATCACAAATAAGTTTCTGAGAATGCTTCCGTCTGGTTTTTATGGGAAGATATTTCCTTTTTCAACATAGGCCTGAAAGCGC TCCAAATGTCCACT TCCAGATACTACAAAAAGAGTGTTTCAAATCTACTCTATGAATGGGAATGTTCTACTCTGTGACTTGAACGCAACATCCCAAAGAAGTTTCTGAGAATGTTTCTGTCTAGAGTTTATCTGAAGACATACCCG TTTCCAACGAAATCCTCAAAGCT]
[-] EMBL CD152299             [ GTTTCAAAACTGCTCCTTCAAAACGATGGTTCAATCCTGTTAGTTGAGCAAACACATCACAAATAGGTTTCTGAGAATGCTTCCGTCTGGTTTTTATGGGAAGATATTTCCTTTTTCAACATAGGCCTGAAAGCGC TCCAAATGTCCACT TCCAGATACTACAAAAAGAGTGTTTCAAATCTACTCTATGAATGGGAATGTTCTACTCTGTGACTTGAACGCAACATCCCAAAGAAGTTTCTGAGAATGTTTCTGTCTAGAGTTTATCTGAAGACATACCCG TTTCCAACGAAATCCTCAAAGCT]
[-] EMBL CD152253             [                  TCAAAACGATGGTTCAATCCTGTTAGTTGAGCAGACACATCACATATCAGTTTCTGAGAATGCTTCCGTCTGGTTTTTACGGGAAGATATTTCCTTTTTCAACATAGGCCTGAAAGCGCGTCCAGATGTCCACTGTCCAGATACTACGAAAAGAGTGTTTCAAATCTACTCTATGAATGGGAATGTTCTACTCTGTGACTTGAACGCAACATCCCAAAGAAGTTTCTGAGAATGTTTCTGTCTAGAGTTTATTTGAAGACATACCCGCTTTCCAACGAAATCCTCAAAGCT]




>consensus_10724#4
TGTTTCAAAACTGCTCCTTCAAAACGATGGTTCAATCCTGTTAGTTGAGCAAACACATCA
CAAATAAGTTTCTGAGAATGCTTCCGTCTGGTTTTTATGGGAAGATATTTCCTTTTTCAA
CATAGGCCTGAAAGCGCTCCAAATGTCCACTTCCAGATACTACAAAAAGAGTGTTTCAAA
TCTACTCTATGAATGGGAATGTTCTACTCTGTGACTTGAACGCAACATCCCAAAGAAGTT
TCTGAGAATGTTTCTGTCTAGAGTTTATCTGAAGACATACCCGTTTCCAACGAAATCCTC
AAAGCT

consensusID : consensus_10724#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 216
fasta sequence

                              [TTCTGTCTAGTTTTTATGGGAAGATATTTCCTTTTTCACCTTAGGCTTGANAGCAATCCAAATGTTCACTTACAGACACTACACAAAGTGTGTTTCAAACCTGCTCTGTGAAAGGGAGTGTTCAATTCTGTGACTTGAATGCAAACATCACAAACTAGTTTCTGACAATGCTGCTGTTTGCTTTTTATACGTATTCCCGTTTCCAACGAAATCCTC]

[-] EMBL CD111620             [TTCTGTCTAGTTTTTATGGGAAGATATTTCCTTTTTCACCTTAGGCTTGANAGCAATCCAAATGTTCACTTACAGACACTACACAAAGTGTGTTTCAAACCTGCTCTGTGAAAGGGAGTGTTCAATTCTGTGACTTGAATGCAAACATCACAAACTAGTTTCTGACAATGCTGCTGTTTGCTTTTTATACGTATTCCCGTTTCCAACGAAATCCTC]
[-] EMBL CD111632             [                      GATA TTCCTTTTTCACCTTAGGCTTGAAAGCAATCCAAATGTTCACTTACAGACACTACACAAAGTGTGTTTCAAACCTGCTCTGTGAAAGGGAGTGTTCAATTCTGTGACTTGAATGCAAACATCACAAACTAGTTTCTGACAATGCTGCTGTTTGCTTTTTATACGTATTCCCGTTTCCAACGAAATCCTC]
[-] EMBL CD111631             [                            TCCTTTTTCACCTTAGGCTTGANAGCAATCCAAATGTTCACTTACAGACACTACACAAAGTGTGTTTCAAACCTGCTCTGTGAAAGGGAGTGTTCAATTCTGTGACTTGAATGCAAACATCACAAACTAGTTTCTGACAATGCTGCTGTTTGCTTTTTATACGTATTCCCGTTTCCAACGAAATCCTC]
[-] EMBL CD111637             [                              CTTTTTCACCTTAGGCTTGAAAGCAATCCAAATGTTCACTTACAGACACTACACAAAGTGTGTTTCAAACCTGCTCTGTGAAAGGGAGTGTTCAATTCTGTGACTTGAATGCAAACATCACAAACTAGTTTCTGACAATGCTGCTGTTTGCTTTTTATACGTATTCCCGTTTCCAACGAAATCCTC]




>consensus_10724#5
TTCTGTCTAGTTTTTATGGGAAGATATTTCCTTTTTCACCTTAGGCTTGANAGCAATCCA
AATGTTCACTTACAGACACTACACAAAGTGTGTTTCAAACCTGCTCTGTGAAAGGGAGTG
TTCAATTCTGTGACTTGAATGCAAACATCACAAACTAGTTTCTGACAATGCTGCTGTTTG
CTTTTTATACGTATTCCCGTTTCCAACGAAATCCTC

consensusID : consensus_10724#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 152
fasta sequence

                              [CCGTTTCCAACGAAATCCTCAAAGCTATCCAAATATCCACTTGCAGATTCTACAAAAAGATTGTTTCAAAACTGCTGTGTCAAAAGGAAGGTTCAACTCGTGTTACTTGAGTACACACATCAAACCAAGGTTTCTGAGAATGCTTGTTTCTG]

[-] EMBL CD066022             [CCGTTTCCAACGAAATCCTCAAAGCTATCCAAATATCCACTTGCAGATTCTACAAAAAGATTGTTTCAAAACTGCTGTGTCAAAAGGAAGGTTCAACTCGTGTTACTTGAGTACACACATCAAACCAAGGTTTCTGAGAATGCTTGTTTCTG]




>consensus_10724#6
CCGTTTCCAACGAAATCCTCAAAGCTATCCAAATATCCACTTGCAGATTCTACAAAAAGA
TTGTTTCAAAACTGCTGTGTCAAAAGGAAGGTTCAACTCGTGTTACTTGAGTACACACAT
CAAACCAAGGTTTCTGAGAATGCTTGTTTCTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10724#0      TTTCACCGTAGACCTGAAAGCGCTCCAAATGTCCACTTCCAGATAGTACAAAAAGAGTGT 60
consensus_10724#5      ------------------------------------------------------------
consensus_10724#4      ------------------------------------------------------------
consensus_10724#2      ------------------------------------------------------------
consensus_10724#3      ------------------------------------------------------------
consensus_10724#6      ------------------------------------------------------------
consensus_10724#1      ------------------------------------------------------------
                                                                                   

consensus_10724#0      TTCAAACCTGCTCTATGAAAGGGAATGTTCAACACTGGGACTTCAATTGAAACATCCCAA 120
consensus_10724#5      ------------------------------------------------------------
consensus_10724#4      ------------------------------------------------------------
consensus_10724#2      ------------------------------------------------------------
consensus_10724#3      ------------------------------------------------------------
consensus_10724#6      ------------------------------------------------------------
consensus_10724#1      --------------------------GGTCGATGCTGTGAGAAGAATGAACACATCAAAA 34
                                                                                   

consensus_10724#0      AGCAGTTTCTGAGAATGCTTCTGTCTAGAGTTTACATGAAGACATTCCCGTTTCCAACGA 180
consensus_10724#5      ------------------------------------------------------------
consensus_10724#4      ------------------------------------------------------------
consensus_10724#2      --------------------------------TATATGAAGATATTCCCGTTTCCAAAGA 28
consensus_10724#3      -----------AGAATGATTCTGTCTGGTTTTCATGGGAAGATAATTCCTTTTCCAACAC 49
consensus_10724#6      ------------------------------------------------------------
consensus_10724#1      AGAAGTTTCTCAGAATGCTTCTGTCTAGTTTTTATGTGAAGACATTTCCTTTTTCACCAT 94
                                                                                   

consensus_10724#0      AATCCTCAAAGCTATCCAAATATCCTCTTGCAGATTTTACAAAAAGTGTGTTTCAGAACT 240
consensus_10724#5      ------------------------------------------------------------
consensus_10724#4      ------------------------------------------------TGTTTCAAAACT 12
consensus_10724#2      AATCCTGAAATCTATCCAAATATCCCCTCGCAGATTCTACAAAAAGAGTGTTTCAAAACT 88
consensus_10724#3      AAGCCTGAATGCGCTCCAAATGGACACTTCCAGATACGACAAAT-GAGTGTTTCAAAGCT 108
consensus_10724#6      ------------------------------------------------------------
consensus_10724#1      AGGCCAAAAAGGGATCCCGAATATCCCTTGTACATTCTACAAAAGGACTGTTTCCAAACT 154
                                                                                   

consensus_10724#0      GCTCTATCAAAACAAAGGTTCAACACTGTCAGTTGAGGGCACACATCACAAATAAGTTTC 300
consensus_10724#5      ------------------------------------------------------------
consensus_10724#4      GCTCCTTCAAAACGATGGTTCAATCCTGTTAGTTGAGCAAACACATCACAAATAAGTTTC 72
consensus_10724#2      GCTCTGTAAAAAGAAAGGTTCAACCCTGTTAGTCGAGTACACACATCACAAACAAGTTTC 148
consensus_10724#3      GTCCTAGGAAAGGGAACGTTCCATTGTGTGACTTGAATGCAAACATCACCAAGTAGTTTC 168
consensus_10724#6      ------------------------------------------------------------
consensus_10724#1      GCTCAATCCAAAGACAGATTCAACTCTTTGGGATGAATGTACACATCACAACGAAGTTTC 214
                                                                                   

consensus_10724#0      TGAGAATGCTTCTGTCTAGTTTTCATGGGAAGATATTTCCTTTTTCACCATAGGCCTGAA 360
consensus_10724#5      ---------TTCTGTCTAGTTTTTATGGGAAGATATTTCCTTTTTCACCTTAGGCTTGAN 51
consensus_10724#4      TGAGAATGCTTCCGTCTGGTTTTTATGGGAAGATATTTCCTTTTTCAACATAGGCCTGAA 132
consensus_10724#2      ACAGAATGCTTCTTTCTAGCTTGTAGGGGAAGATATTCCCTTTATCACCATGGGCCTCAA 208
consensus_10724#3      TCAGAACGCTGCTGTCTGCTTTTTAT----ATGTATTCCCGTGTCCAAGGAAATCGTCAA 224
consensus_10724#6      --------------------------------------CCGTTTCCAACGAAATCCTCAA 22
consensus_10724#1      TCAGAAAGCTTCTGTCTAGTTTTTGTGTGAAGATATTTCTTTTTTCACCATAGGCTTCAA 274
                                                             *  *   **       * * * 

consensus_10724#0      AGCGATC-CAAATGTCCACATCCACATACTACAAAAAGAGTGTTTCAAACCTGCTCTATG 419
consensus_10724#5      AGCAATC-CAAATGTTCACTTACAGACACTACACAAAGTGTGTTTCAAACCTGCTCTGTG 110
consensus_10724#4      AGCGCTC-CAAATGTCCACTTCCAGATACTACAAAAAGAGTGTTTCAAATCTACTCTATG 191
consensus_10724#2      ACCGTCC-GAAACGTCCACTTCCATATACTAAAAAAGGAGTGTTTCAAACCTGCTCTATG 267
consensus_10724#3      AGCCAGC-CAAATATCCACTTGCAGGTTCCACAAAAAGAGTGTTTCAAAACTGCTCTCTC 283
consensus_10724#6      AGCTATC-CAAATATCCACTTGCAGATTCTACAAAAAGATTGTTTCAAAACTGCTGTGTC 81
consensus_10724#1      AGGGCTCACAAATATCACAAAGCAGATTCTACAAAAAGACTCTATCCAAACTGGTCAATG 334
                       *     *  ***  *       **    * * * ** *  * * ** ** **  *   * 

consensus_10724#0      AAAGGGAATGCTCAACTC-TGTGAATTGAATGCAGACATCACAAAGAAGTTTCTGAGAAT 478
consensus_10724#5      AAAGGGAGTGTTCAATTC-TGTGACTTGAATGCAAACATCACAAACTAGTTTCTGACAAT 169
consensus_10724#4      AATGGGAATGTTCTACTC-TGTGACTTGAACGCA-ACATCCCAAAGAAGTTTCTGAGAAT 249
consensus_10724#2      AAAGGCAATGTTCAACTC-TGTGACTTGAATGCAGACATCACAGAGCAGTTACTGAGAAT 326
consensus_10724#3      AAAAGACATGTTCAACTC-TGTCAGTTGAGGACACACGTCACAAAGAAGTTTGTGAGAAT 342
consensus_10724#6      AAAAGGAAGGTTCAACTCGTGTTACTTGAGTACACACATCAAACCAAGGTTTCTGAGAAT 141
consensus_10724#1      AAAAGAACACTTGAAATC-TGTGAGATGAATGAGCACATCACAAAGAATTTTCTCAGAAA 393
                       **  *      *  * ** *** *  ***      ** **  *      **  * * ** 

consensus_10724#0      GCTGCTGTCTCCTTTTTATATG----TAATCCCGTTTCCAACGAAATCCTCAAAGC-TAG 533
consensus_10724#5      GCTGCTGTTTGCTTTTTATACG----TATTCCCGTTTCCAACGAAATCCTC--------- 216
consensus_10724#4      GTTTCTGTCTAGAGTTTATCTGAAGACATACCCGTTTCCAACGAAATCCTCAAAGC-T-- 306
consensus_10724#2      GCTTCTGTCCAGACTTTATAGGAAGATATTCCCGTTTCCAACGAAATCTTCACAGC-TAT 385
consensus_10724#3      GCTTCTGTCTAGTTTCTATGGGAAGATATCTCCTTTTTCACCATAGGCCTCAAA------ 396
consensus_10724#6      GCTTGTTTCTG------------------------------------------------- 152
consensus_10724#1      GCTTCTGTCTAATTTTTATGTGAAGATATTTCCATTTTCACCATAGACTTCAAACCGCCT 453
                       * *  * *                                                    

consensus_10724#0      CCA--------------------------------------------------------- 536
consensus_10724#5      ------------------------------------------------------------
consensus_10724#4      ------------------------------------------------------------
consensus_10724#2      CCAAATATCCACTTGCAGATAGTACAAAAAGGGTGTATCAAAAATGCTCTGT-------- 437
consensus_10724#3      ------------------------------------------------------------
consensus_10724#6      ------------------------------------------------------------
consensus_10724#1      ACATATATCCCTTTGCAGATTCTACAAAAAGATTGTCTCCAAACTGCTCAATCAAAGAAA 513
                                                                                   

consensus_10724#0      ----------------------
consensus_10724#5      ----------------------
consensus_10724#4      ----------------------
consensus_10724#2      ----------------------
consensus_10724#3      ----------------------
consensus_10724#6      ----------------------
consensus_10724#1      GCTTTCTGCCCTGTGAGATGAG 535