cluster # 10728

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Schistosoma mansoni
cluster # 10728 cluster # 10728 Sequences # 20 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10728#0 length = 1518 sequences # 18

consensus_10728#1 length = 322 sequences # 1
consensus_10728#2 length = 233 sequences # 1

consensusID : consensus_10728#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 1518
fasta sequence

                              [TCTGGTGGAACTGTGTGTGATGTCGGTTGTGATGTTCGTCTTTGGAGTATGCCGTTGAAAAGAAAACTATTGAATTATCAACCAAATCAACATTCTGGACCGATCACATGTTTGGGCCAATTAAAAATTACAGATCACTACAGTATTTGTATATCTGGTTGTATAGATGGGAGTGTAATGTTTTGGTCAGTTAAGAATTCCGAGCCGTTGGATCTAAAAAATGTGTCGGTTGCAGACAAGTCTGTACAATGGAAACCCTTATTACATGCGTTTTGTTCAGCGTTACGACCAAAGTATGCA-ATATC-TGATATTTC-TACACAAACTTATGTAATGGATGAGTCAAAACCGACAGTGCAATATTTGATTTATATTGCTTACGGTGAAAATTTATGGAGAATGCGAATTATATTGAATCAGTCAAATATGTCTATGAATGATATACAAAATACTTTTGAACGATTGTTCTCTATGAATGGGAAAACAGAATTATGTTTTTCAGAATTAGATGTATTCTGGTCATCTGAATCAGATATTCCTTGTTCTGATATTGTTTGCTTCACTGCAAGTCATCCCATTGTAAAATTATCTCCACGTTATGCTAAACCTAATCATTTAGAAC-AATGTGAAATTATTGCTGTCCTTGTCAATGGTGATGTAATTGTTGTAACAAGTAATGAACGTGAAAACTTTTTATTTGATCATTGTACTGTACAAAATGGTTTATGGTGCTCATCCATAGGTACCAATGATGCTGGAAATTTCACTACACGTTTAGGCAT-GGCTTTTGTATGCAAACACACTGATGAAAGTCGTACATTTCGTCGTATTTCAGGATACATGGGATCATGTGAAAGAGAAATGTGGATAAATTCATTGAGTGTTCTACGTAACGTACTAGCAGAAGGAGATCATTTCTTGTATTTGGCTGAATGTCATCTTATCAATTGTTGGAAAATTCTCATTTGTAATGAAAATGGTGATTTGGTGACAGATTTTACACTTGATAATTCATCAATAAAAGTCACTGGATATTGTGCGAAATTGCTATCACTGACTGAAGACAATTGTTCAACATTGATCTATCTTATAATTGCAACATCAGATAATATTTTACATGTTCTAAGATGTACAATAAACAATCCAATCACAGTGGTGAATTCAAACCAGTGGAAACAAGTTGCTATGTATCCAGTTGAAACAGAAATTACTCAACTTTATACTCTTGATGATAGTCAATTAAAAATTCTTGCCGGTGATAGACAAGGACAAATTCATTATTTCGTGCTATTGTGATATGTACACAC----ACATACATACATACCTACATAGAAAGTTTGTATGTTGAAAAACTGTTTTGTTTCTAATTGAATAATGTTTTTT-CTGTTAATTTTACTTTTTATATTTTACCATAGAACTAAC----TTCTTTCTTTCATAATTATTCCCTGAATGATCTATGCAAATAAATAATCATAATGGGATTGTTAGATTTTAAATATGTTAACCTGTTCTTTTAAAGTATATT]

[+] EMBL CD115817             [TCTGGTGGAACTGTGTGTGATGTCGGTTGTGATGTTCGTCTTTGGAGTATGCCGTTGAAAAGAAAACTATTGAATTATCAACCAAATCAACATTCTGGACCGATCACATGTTTGGGCCAATTAAAAATTACAGATCACTACAGTATTTGTATATCTGGTTGTATAGATGGGAGTGTAATGTTTTGGTCAGTTAAGAATTCCGAGCCGTTGGATCTAAAAAATGTGTCGGTTGCAGACGAGTCTGTACAATGGAAACCCTTATTACATGCGTTTTGTTCAGCGTTACGACCAAAGTATGCA ATATC TGATATTTC TACACAAACTTATGTAATGGATGAGTCAAAACCGACAGTGCAATATTTGATTTATATTGCTTACGGTGAAAATTTATGGAGAATGCGAATTATATTGAATCAGTCAAATATGTCTATGAATGATATACAAAATACTTTTGAACGATTGTTCTCTATGAATGGGAAAACAGAATTATGTTTTTCAGAATTAGATGTATTCTGGTCATCTGAATCAGATATTCCTTGTTCTGATATTGTTTGCTTCACTGCAAGTCATTCCATTGTAAAATTATCTCCACGTTATGCTAAACCTAATCATTTATAAC AATGTGAAATTTTTGCTGTCCTTGTCATGGGGGATGTATTTGTTGga                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD116373             [        AACTGTGTGTGATGTCGGTTGTGATGTTCGTCTTTGGAGTATGCCGTTGAAAAGAAAACTATTGAATTATCAACCAAATCAACGTTCTGGACTGATCACATGTTTGGGCCAATTAAAAATTACAGATCACTACAGTATTTGTATATCTGGTTGTATAGATGGGAGTGTAATGTTTTGGTCAGTTAAGAATTCCGAGCCGTTGGATCTAAAAAATGTGTCGGTTGCAGACAAGTCTGTACAATGGAAACCCTTATTACATGCGTTTTGTTCAGCGTTACGACCAAAGTATGCA ATATC TGATATTTC TACACAAACTTATGTAATGGATGAGTCAAAACCGACAGTGCAATATTTGATTTATATTGCTTACGGTGAAAATTTATGGAGAATGCGAATTATATTGAATCAGTCAAATATGTCTATGAATGATATACAAAATACTTTTGAACGATTGTTCTCTATGAATGGGAAAACAGAATTATGTTTTTCAGAATTAGATGTATTCTGGTCATCTGAATCAGATATTCCTTGNTCTGATATTGTTTGCTTCACTGCAAGTCATCCCATTGTAAAATTATCTCCACGTTATGCTAAACCTAATCATTTAGAACAAATGTG AATTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD112577             [                GTGATGTCGGTTGTGATGTTCGTCTTTGGAGTATGCCGTTGAAAAGAAAACTATTGAATTATCAACCAAATCAACATTCTGGACCGATCACATGTTTGGGCCAATTAAAAATTACAGATCACTACAGTATTTGTATATCTGGTTGTATAGATGGGAGTGTAATGTTTTGGTCAGTTAAGAATTCCGAGCCGTTGGATCTAAAAAATGTGGCGGTTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD166241             [                                                                                ccactccaAACAGT T GACCGATCACATGTTTGTGCCAATTAAAAATTACACATCACTACAGTATTTGTATATCTGGTTGTATAGATGGGAGTGTAATGTTTTGGTCAGTTAAGAATTCCGAGCCGTTGGATCTAAAAAATGTGTCGGTTGCAGACAAGTCTGTACAATGGAAACCCTTATTACATGCGTTTTGTTCAGCGTTACGACCAAAGTATGCA ATATC TGATATTTC TACACAAACTTATGTAATGGATGAGTCAAAACCGACAGTGCAATATTTGATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD115427             [                                                                                                                                       CACTCCAGTATTTGTATATCTGGTTGTATAGATGGGAGTGTAATGTTTTGGTCAGTTAAGAATTCCGAGCCGTTGGATTTAAAAAATGTGTCGGTTGCAGACAAGTCTGTACAATGGAAACCCTTATTACATGCGTTTTGTTCAGCGTTACGACCAAAGTATGCA ATATC TGATATTTC TACACAAACTTATGTAATGGATGAGTCAAAACCGACAGTGCAATATTTGATTTATATTGCTTACGGTGAAAATTTATGGAGAATGCGAATTATATTGAATCAGTCAAATATGTCTATGAATGATATACAAAATACTTTTGAACGATTGTTCTCTAGGAATGGGAAAACAGAATTATGTTTTTCAGAATTAGATGTATTCTGGTCATCTGAATCAGATATTCCTTGTTCTGATATTGTTTGCTTCAATGCAAGTCATCCCATTGTAAAATTAACTCCACGTTATGCTAAACCTAATCATTTAGAAC AATGTGAAATTATTGCTGTCCTTGTCAATGGTGATGTAATTGTTGTAACAAGTAATGAACGTGccag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AW017451             [                                                                                                                                                               TGTATAGATGGGAGTGTAATGTTTTGGTCAGTTAAGAATTCCGAGCCGTTGGATCTAAAAAATGTGTCGGTTGCAGACAAGTCTGTACAATGGAAACCCTTATTACATGCGTTTTGTTCAGCGTTACGACCAAAGTATGCA ATATC TGATATTTC TACACAAACTTATGTAATGGATGAGTCAAAACCGACAGTGCAATATTTGATTTATATTGCTTACGGTGAAAATTTATGGAGAATGCGAATTATATTGAATCAGTCAAATATGTCTATGAATGATATACAAAATACTTTTGAACGATTGTTCTCTATGAATGGGAAAACAGAATTATGTTTTTCAGAATTAGATGTATTCTGGTCATCTGAATCAGATATTCCTTGTTCTGATATTGTTTGCTTCACTGCAAGTCATCCCATTGTAAAATTATCTCCACGTTATGCTAAACCTAATCATTTAGAAC AATGTGAAATTATTGCTGTCCTTGTCAATGGTGATGTAATTGTTGTAACAAGTAATGAACGTGAAAACTTTNTATTTGATCATTGTACTGTACAAAATGGTTTATGGTGCTCATCCATAGGTACCAATGATGCTGGAAATTTCACTACACGTTTAGGCAT GGCTTTTGTATGCAAACACACTGATGAAAGTCGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD115286             [                                                                                                                                                                                                     TTCCGAGCCGTTGGATCTAAAAAATGTGTCGGTTGCAGACAAGTCTGTACAATGGAAACCCTTATTACATGCGTTTTGTTCAGCGTTACGACCAAAGTATGCA ATATC TGATATTTC TACACAAACTTATGTAATGGATGAGTCAAAACCGACAGTGCAATATTTGATTTATATTGCTTACGGTGAAAATTTATGGAGAATGCGAATTATATTGAATCAGTCAAATATGTCTATGAATGATATACAAAATACTTTTGAACGATTGTTCTCTATGAATGGGAAAACAGAATTATGTTTTTCAGAATTAGATGTATTCTGGTCATCTGAATCAGACATTCCTTGTTCTGATATTGTTTGCTTCACTGCAAGTCATCCCATTGTAAAATTATCTCCACGTTATGCTAAACCTAATCATTTAGAAC AATGTGAAATTATTGCTGTCCTTGTCAATGGTGATGTAATTGTTGTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD195819             [                                                                                                                                                                                                                                                                   aATTACATGCGTTTTGTTCAGCGCTACGACCAAAGTATGCA ATATC TGATATTTC TACACAAACTTATGTAATGGATGAGTCAAAACCGACAGTGCATTATTTGATTTATATTGCTTACGGNGAAAATTTATGGAGAATGCGAATTATATTGAATCAGTCAAATATGTCTATGAATGATATACATAATACTTTTGAACGATTGTTCTCTATGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD087926             [                                                                                                                                                                                                                                                                                  gcaCAGCGTTACGACCAAAGTATGCA TTATC TGATATTGC TACACAAACTTATGTAATGGATGAGTCAAAACCGACAGTGCATTATTTGATTTATATTGCTTACGGTGAAAATTTATGGAGAATGCGAATTATATTGAATCAGTCAAATATGTCTATGAATGATATACAAAATACTTTTGAACGATTGTTCTCTATGAATGGGAAAACAGAATTATGTTTTTCAGAATTAGATGTATTCTGGTCATCTGAATCAGATATTTCTTGTTCTGATATTGTTTGCTTCACTGCAAGTCATCCTATTGTAAAAATATCTCCACGTTATGCTAAACCTAATCACTTAGAAC AATGTGAAATTATTGCTGTCCTTGTCAATGGTGATGTAATTGTTGT ACAAGTAATGAACGTGAAAAC TTTTATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD087795             [                                                                                                                                                                                                                                                                                           TACGATCAAAGTATGCA ATATC TGATATGTCGTACACAAACTTATGTAATGGATGAGTCAAAACCGACAGTGCATTATTTGATTTATATTGCTTACGGTGAAAATTTATGGAGAATGCGAATTATATTGAATCAGTCAAATATGTCTATGAATGATATACAAAATACTTTTGAACGATTGTTCTCTATGAATGGGAAAACAGAATTATGTTTTTCAGAATTAGATGTATTCTGGTCATCTGAATCAGATATTTCTTGTTCTGATATTGTTTGCTTCACTGCAAGTCATCCTATTGTAAAAATATCTCCACGTTATGCTAAACCTAACCACTTAGAAC AATGTGAAATTATTGCTGTCCTTGTCAATGGTGATGTAATTGTTGTAACAAGTAATGAACGTGAAAACTTTTTATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD087858             [                                                                                                                                                                                                                                                                                                 CAAATTATGCATATATCGTGATATGTCGTACACAAACTTATGTAATGGATGAGTCAAAACCGACAGTGCATTATTTGATTTATATTGCTTACGGTGAAAATTTATGGAGAATGCGAATTATATTGAATCAGTCAAATATGTCTATGAATGATATACAAAATACTTTTGAACGATTGTTCTCTATGAATGGGAAAACAGAATTATGTTTTTCAGAATTAGATGTATTCTGGTCATCTGAATCAGATATTTCTTGTTCTGATATTGTTTGCTTCACTGCAAGTCATCCTATTGTAAAAATATCTCCACGTTATGCTAAACCTAATCACTTAGAAC AATGTGAAATTATTGCTGTCCTTGTCAATGGTGATGTAATTGTTGTAACAAGTAATGAACGTGAAAACTTTTTATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD115758             [                                                                                                                                                                                                                                                                                                                                                                                                                                    TCAAATATGTCTAGCAATGATACACAAAAGACTTTTGAACGATTGTTCTCTATGAATGGGAAAACAGAATTATGTTTTTCAGAATTAGATGTATTCTGGTCATCTGAATCAGATATTCCTTGTTCTGATATTGTTTGCTTCACTGCAAGTCATCCCATTGTAAAATTATCTCCACGTTATGCTAAACCTAATCATTTAGAAC AATGTGAAATTATTGCTGTCCTTGTCAATGGTGATGTAATTGTTGTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL SMAA8300             [                                                                                                                                                                                                                                                                                                                                                                                                                                           TGTCTATGAATGATATACAAAATACTTTTGAACGNTTGTTCTCTATGAATGGG AAACAGAATTATGTTTTTCAGAATTAGGTGTATTCTGGTCATCTGAATCAGATATTCCCTGTTCTGATATTGTTTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD082814             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AATTTTACTACACGTTCAGGCATGGGCTTTTGTATGCAAACACACTGATGAAAGTCGTACATTTCGTCGTATTTCAGGATACATGGGATCATGTGAAAGAGAAATGTGGATAAATTCATTGAGTGTTCTACGTAACGTACTAGCAGAAGGAGATCATTTCTTGTATTTGGCTGAATGTCATCTTATCAATTGTTGGAAAATTCTCATTTGTAATGAAAATGGTGATTTGGTGACAGATTTTACACTTGATAATTCATCAATAAAAGTCACTGGATATTGTGCGAAATTGCTATCACTGACTGAAGACAATTGTTCAACATTGATCTATCTTATAATTGCAACATCAGATAATATTTTACATGTTCTAAGATGTACAATAAACAATCCAATCACAGTGGTGAATTCAAACCAGTGGAAACAAGTTGCTATGTATCCAGTTGAAACAGAAATTACTCAACTTTATACTCTTGATGATAGTCAATTAAAAATTCTTGCCGGTGATAGACAAGGACAAATTCATTATTTCGTGCTATTGTGATATGTACACAC    ACATACATACATACCTACATAGAAAGTTTGTATGTTGAAAAACTGTTNTGTTTCTAA                                                                                                                                                                  ]
[+] EMBL CD078451             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGTGAAAGAGAAATGTGGATAAATTCATTGAGTGTTCTACGTAACGTACTAGCAGAAGGAGATCATTTCTTGTATTTGGCTGAATGTCATCTTATCAATTGTTGGAAAATTCTCATTTGTAATGAAAATGGTGATTTGGTGACAGATTTTACACTTGATAATTCATCAATAAAAGTCACTGGATATTGTGCGAAATTGCTATCACTGACTGAAGACAATTGTTCAACATTGATCTATCTTATAATTGCAACATCAGATAATATTTTACATGTTCTAAGATGTACAATAAACAATCCAATCACAGTGGTGAATTCAAACCAGTGGAAACAAGTTGCTATGTATCCAGTTGAAACAGAAATTACTCAACTTTATACTCTTGATGATAGTCAATTAAAAATTCTTGCCGGTGATAGACAAGGACAAATTCATTATTTCGTGCTATTGTGATATGTACACAC    ACATACATACATACCTACATAGAAAGTTTGTATGTTGAAAAACTGTTTTGTTTCTAATTGAATAATGTTTTTT CTGTTAATTNTACTTTTTATATTNTACCATAGAACTAAC    TTCTTTCTTTCATAATTATTCCCTGAATGATCTATGCAAATAAATAA                                                       ]
[-] EMBL CD076406             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGATAATTCATCAATAAAAGTCCCTGGATATTGTGCGAAATTGCTATCCCTGACTGAAGACAATTGTTCAACATTGATCTATTTTATAATTGCAACATCAGATAATATTTTACATGTTTTAAGATGTCCAATAAACAATCCCATCCCAGTGGTGAATTCAAACCAGTGGAAACAAGTTGCTATGTATCCAGTTGAAACAGAAATTACTCAACTTTATACTCTTGATGATAGTCAATTAAAAATTTTTGCCGGTGATAGACAAGGACAAATTCATTATTTTGTGGTATTGTGATATGGACACAC    ACATACATACATACCTACATAGAAAGTTTGTATGTTGAAAAACTGTTTTGTTTTTAATTGAAAAAAGTTTTTT CTGTTAATTTTACTTTTTATATTTTACCATAGAACTAAC    TTCTTTTTTTCATAATTATTCCCTGAATGATCTATGCAAATAAATAAT                                                      ]
[-] EMBL AI977487             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CGAAATTGCTATCACTGACTGAAGACAATTGTTCAACATTAATCTATCTTATAATTGCAACATCAGATAATATTTTACATGTTCTAAGATGTACAATAAACAATCCAATCACAGTGGTGAATTCAAACCAGTGGAAACAAGTTGCTATGTATCCAGTTGAAACAGAAATTACTCAACTTTATACTCTTGATGATAGTCAATTAAAAATTCTTGCCGGTGATAGACAAGGACAAATTCATTATTTCGTATTATTGTGATATGTACACAC    ACATACATACATACCTACATAGAAAGTTTGTATGTTGAAAAACTGTTTTGTTTCTAATTGAATAATGTTTTTT  TGTTAATTTTACTTTTTATATCTTACCATAGAACTAACTTCTTTCTTTCTTTCATAATTATTCCCTGAATGATCTATGCAAGTAAATAATCATAATGGGATTGTTAGATTTTAAATATGTTAACCTGTTCTTTTAAAGTATATT]
[+] EMBL AA960694             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AATCACAGTGGTGAATTCAAACCAGTGGAAACAAGTTGCTATGTATCCAGTTGAAACAGAAATTACTCAACTTTATACTCTTGATGATAGTCAATTAAAAATTCTTGCCGGTGATAGACAAGGACAAATTCATTATTTCGTGCTATTGTGATATGTACACACACATACATACATACATACCTACATAGAAAGTTTGTATGTTGAAAAACTGTTTTGTTTCTAATTGAATAATGTTTTTTCCTGTTAATTTTACTTTTTATATTTTACCA                                                                                                                    ]




>consensus_10728#0
TCTGGTGGAACTGTGTGTGATGTCGGTTGTGATGTTCGTCTTTGGAGTATGCCGTTGAAA
AGAAAACTATTGAATTATCAACCAAATCAACATTCTGGACCGATCACATGTTTGGGCCAA
TTAAAAATTACAGATCACTACAGTATTTGTATATCTGGTTGTATAGATGGGAGTGTAATG
TTTTGGTCAGTTAAGAATTCCGAGCCGTTGGATCTAAAAAATGTGTCGGTTGCAGACAAG
TCTGTACAATGGAAACCCTTATTACATGCGTTTTGTTCAGCGTTACGACCAAAGTATGCA
ATATCTGATATTTCTACACAAACTTATGTAATGGATGAGTCAAAACCGACAGTGCAATAT
TTGATTTATATTGCTTACGGTGAAAATTTATGGAGAATGCGAATTATATTGAATCAGTCA
AATATGTCTATGAATGATATACAAAATACTTTTGAACGATTGTTCTCTATGAATGGGAAA
ACAGAATTATGTTTTTCAGAATTAGATGTATTCTGGTCATCTGAATCAGATATTCCTTGT
TCTGATATTGTTTGCTTCACTGCAAGTCATCCCATTGTAAAATTATCTCCACGTTATGCT
AAACCTAATCATTTAGAACAATGTGAAATTATTGCTGTCCTTGTCAATGGTGATGTAATT
GTTGTAACAAGTAATGAACGTGAAAACTTTTTATTTGATCATTGTACTGTACAAAATGGT
TTATGGTGCTCATCCATAGGTACCAATGATGCTGGAAATTTCACTACACGTTTAGGCATG
GCTTTTGTATGCAAACACACTGATGAAAGTCGTACATTTCGTCGTATTTCAGGATACATG
GGATCATGTGAAAGAGAAATGTGGATAAATTCATTGAGTGTTCTACGTAACGTACTAGCA
GAAGGAGATCATTTCTTGTATTTGGCTGAATGTCATCTTATCAATTGTTGGAAAATTCTC
ATTTGTAATGAAAATGGTGATTTGGTGACAGATTTTACACTTGATAATTCATCAATAAAA
GTCACTGGATATTGTGCGAAATTGCTATCACTGACTGAAGACAATTGTTCAACATTGATC
TATCTTATAATTGCAACATCAGATAATATTTTACATGTTCTAAGATGTACAATAAACAAT
CCAATCACAGTGGTGAATTCAAACCAGTGGAAACAAGTTGCTATGTATCCAGTTGAAACA
GAAATTACTCAACTTTATACTCTTGATGATAGTCAATTAAAAATTCTTGCCGGTGATAGA
CAAGGACAAATTCATTATTTCGTGCTATTGTGATATGTACACACACATACATACATACCT
ACATAGAAAGTTTGTATGTTGAAAAACTGTTTTGTTTCTAATTGAATAATGTTTTTTCTG
TTAATTTTACTTTTTATATTTTACCATAGAACTAACTTCTTTCTTTCATAATTATTCCCT
GAATGATCTATGCAAATAAATAATCATAATGGGATTGTTAGATTTTAAATATGTTAACCT
GTTCTTTTAAAGTATATT

consensusID : consensus_10728#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 322
fasta sequence

                              [TGTGTCGGTTGAAGACAAGTCTGTACAATGGAAACCCTTATTACATGCGTTNGGNCCAGCGTTACGACCAAAGTATGNANTTTCTGATNTNCCTACACAAACTTATGTAATGGATGAGTCAAAACCGACAGTGCAATATTTGGNTTTNTNTCGCTTACGGCGNAAAATTNGTGGAGCAATGCGANTTATNTTGANTCAGTCAAATNTGTCTATGNAATGATNTACAAAATNCTTTGGGAACGANTGGTNCTCTATGCAATGGGAAAACAGAATTATGNCNTCTCAGGGATTAGATGTATTCTGGCNCATCTGAATCAGATNT]

[+] EMBL SM381                [TGTGTCGGTTGAAGACAAGTCTGTACAATGGAAACCCTTATTACATGCGTTNGGNCCAGCGTTACGACCAAAGTATGNANTTTCTGATNTNCCTACACAAACTTATGTAATGGATGAGTCAAAACCGACAGTGCAATATTTGGNTTTNTNTCGCTTACGGCGNAAAATTNGTGGAGCAATGCGANTTATNTTGANTCAGTCAAATNTGTCTATGNAATGATNTACAAAATNCTTTGGGAACGANTGGTNCTCTATGCAATGGGAAAACAGAATTATGNCNTCTCAGGGATTAGATGTATTCTGGCNCATCTGAATCAGATNT]




>consensus_10728#1
TGTGTCGGTTGAAGACAAGTCTGTACAATGGAAACCCTTATTACATGCGTTNGGNCCAGC
GTTACGACCAAAGTATGNANTTTCTGATNTNCCTACACAAACTTATGTAATGGATGAGTC
AAAACCGACAGTGCAATATTTGGNTTTNTNTCGCTTACGGCGNAAAATTNGTGGAGCAAT
GCGANTTATNTTGANTCAGTCAAATNTGTCTATGNAATGATNTACAAAATNCTTTGGGAA
CGANTGGTNCTCTATGCAATGGGAAAACAGAATTATGNCNTCTCAGGGATTAGATGTATT
CTGGCNCATCTGAATCAGATNT

consensusID : consensus_10728#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 233
fasta sequence

                              [ATAAAACGTCAAATCTCCACAAAACATTATCATAACAAAATAGAAATTACAAACGTTTCATCATGATTAGGTTTTATCAAGCTACTGTACTTGTCAGTCATTTGTTGTGATATTTAGATCAACCAAATCAACATTCTGGACCGATCACATGTTTGGGCCAATTAAAAATTACAGATCACTACAGTATTTGTATATCTGGTTGTATAGATGGGAGTGTAATGTTTTGGTCAGTT]

[-] EMBL CD163299             [ATAAAACGTCAAATCTCCACAAAACATTATCATAACAAAATAGAAATTACAAACGTTTCATCATGATTAGGTTTTATCAAGCTACTGTACTTGTCAGTCATTTGTTGTGATATTTAGATCAACCAAATCAACATTCTGGACCGATCACATGTTTGGGCCAATTAAAAATTACAGATCACTACAGTATTTGTATATCTGGTTGTATAGATGGGAGTGTAATGTTTTGGTCAGTT]




>consensus_10728#2
ATAAAACGTCAAATCTCCACAAAACATTATCATAACAAAATAGAAATTACAAACGTTTCA
TCATGATTAGGTTTTATCAAGCTACTGTACTTGTCAGTCATTTGTTGTGATATTTAGATC
AACCAAATCAACATTCTGGACCGATCACATGTTTGGGCCAATTAAAAATTACAGATCACT
ACAGTATTTGTATATCTGGTTGTATAGATGGGAGTGTAATGTTTTGGTCAGTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10728#0      TCTGGTGGAACTGTGTGTGATGTCGGTTGTGATGTTCGTCTTTGGAGTATGCCGTTGAAA 60
consensus_10728#1      ------------------------------------------------------------
consensus_10728#2      ------------------------------------------------------------
                                                                                   

consensus_10728#0      AGAAAACTATTGAATTATCAACCAAATCAACATTCTGGACCGATCACATGTTTGGGCCAA 120
consensus_10728#1      ------------------------------------------------------------
consensus_10728#2      ------------------------------------------------------------
                                                                                   

consensus_10728#0      TTAAAAATTACAGATCACTACAGTATTTGTATATCTGGTTGTATAGATGGGAGTGTAATG 180
consensus_10728#1      ------------------------------------------------------------
consensus_10728#2      ------------------------------------------------------------
                                                                                   

consensus_10728#0      TTTTGGTCAGTTAAGAATTCCGAGCCGTTGGATCTAAAAAATGTGTCGGTTGCAGACAAG 240
consensus_10728#1      -----------------------------------------TGTGTCGGTTGAAGACAAG 19
consensus_10728#2      ------------------------------------------------------------
                                                                                   

consensus_10728#0      TCTGTACAATGGAAACCCTTATTACATGCGTTTTGTTCAGCGTTACGACCAAAGTATGCA 300
consensus_10728#1      TCTGTACAATGGAAACCCTTATTACATGCGTTNGGNCCAGCGTTACGACCAAAGTATGNA 79
consensus_10728#2      --------ATAAAA-----CGTCAAATCTCCACAAAACATTATCATAAC-AAAATA-GAA 45
                               **  **       * * **          **   * *  ** *** ** * *

consensus_10728#0      ATATCTGATATTTCTACACAAACTTATGTAATGGATGAGTCAAAACCGACAGTGCAATAT 360
consensus_10728#1      NTTTCTGATNTNCCTACACAAACTTATGTAATGGATGAGTCAAAACCGACAGTGCAATAT 139
consensus_10728#2      ATTACAAACGTTTCATCATGATTAGGTTTTATCAAGCTACTGTACTTGTCAGT-CATTTG 104
                        *  *  *  *  *  **  *     * * **  *        *   * **** ** *  

consensus_10728#0      TTG-ATTTATATTGCTTACGGTGAAAA-TTTATGGAG-AATGCGAATTATATTGAATCAG 417
consensus_10728#1      TTGGNTTTNTNTCGCTTACGGCGNAAAATTNGTGGAGCAATGCGANTTATNTTGANTCAG 199
consensus_10728#2      TTGTGATATTTAGATCAACCAAATCAACATTCTGGACCGATCACATGT---TTGGGCCAA 161
                       ***   *  *       **      **  *  ****   **   *  *   ***   ** 

consensus_10728#0      TCAAATATGTCTATGAA-TGATATACAAAATACTTTTG-AACGATTG-TTCTCTATG-AA 473
consensus_10728#1      TCAAATNTGTCTATGNAATGATNTACAAAATNCTTTGGGAACGANTGGTNCTCTATGCAA 259
consensus_10728#2      TTAAAAAT---TACAGA-----TCACTACAGTATTTGT--ATATCTGGTTGTATA---GA 208
                       * ***  *   **   *       ** * *   ***    *    ** *  * **    *

consensus_10728#0      TGGGAAAACAGAATTATGTTTTTC--AGAATTAGATGTATTCTGG-TCATCTGAATCAGA 530
consensus_10728#1      TGGGAAAACAGAATTATGNCNTCTCAGGGATTAGATGTATTCTGGCNCATCTGAATCAGA 319
consensus_10728#2      TGGGAGTGTAATGTTTTGGTCAGTT----------------------------------- 233
                       *****    *   ** **                                          

consensus_10728#0      TATTCCTTGTTCTGATATTGTTTGCTTCACTGCAAGTCATCCCATTGTAAAATTATCTCC 590
consensus_10728#1      TNT--------------------------------------------------------- 322
consensus_10728#2      ------------------------------------------------------------
                                                                                   

consensus_10728#0      ACGTTATGCTAAACCTAATCATTTAGAACAATGTGAAATTATTGCTGTCCTTGTCAATGG 650
consensus_10728#1      ------------------------------------------------------------
consensus_10728#2      ------------------------------------------------------------
                                                                                   

consensus_10728#0      TGATGTAATTGTTGTAACAAGTAATGAACGTGAAAACTTTTTATTTGATCATTGTACTGT 710
consensus_10728#1      ------------------------------------------------------------
consensus_10728#2      ------------------------------------------------------------
                                                                                   

consensus_10728#0      ACAAAATGGTTTATGGTGCTCATCCATAGGTACCAATGATGCTGGAAATTTCACTACACG 770
consensus_10728#1      ------------------------------------------------------------
consensus_10728#2      ------------------------------------------------------------
                                                                                   

consensus_10728#0      TTTAGGCATGGCTTTTGTATGCAAACACACTGATGAAAGTCGTACATTTCGTCGTATTTC 830
consensus_10728#1      ------------------------------------------------------------
consensus_10728#2      ------------------------------------------------------------
                                                                                   

consensus_10728#0      AGGATACATGGGATCATGTGAAAGAGAAATGTGGATAAATTCATTGAGTGTTCTACGTAA 890
consensus_10728#1      ------------------------------------------------------------
consensus_10728#2      ------------------------------------------------------------
                                                                                   

consensus_10728#0      CGTACTAGCAGAAGGAGATCATTTCTTGTATTTGGCTGAATGTCATCTTATCAATTGTTG 950
consensus_10728#1      ------------------------------------------------------------
consensus_10728#2      ------------------------------------------------------------
                                                                                   

consensus_10728#0      GAAAATTCTCATTTGTAATGAAAATGGTGATTTGGTGACAGATTTTACACTTGATAATTC 1010
consensus_10728#1      ------------------------------------------------------------
consensus_10728#2      ------------------------------------------------------------
                                                                                   

consensus_10728#0      ATCAATAAAAGTCACTGGATATTGTGCGAAATTGCTATCACTGACTGAAGACAATTGTTC 1070
consensus_10728#1      ------------------------------------------------------------
consensus_10728#2      ------------------------------------------------------------
                                                                                   

consensus_10728#0      AACATTGATCTATCTTATAATTGCAACATCAGATAATATTTTACATGTTCTAAGATGTAC 1130
consensus_10728#1      ------------------------------------------------------------
consensus_10728#2      ------------------------------------------------------------
                                                                                   

consensus_10728#0      AATAAACAATCCAATCACAGTGGTGAATTCAAACCAGTGGAAACAAGTTGCTATGTATCC 1190
consensus_10728#1      ------------------------------------------------------------
consensus_10728#2      ------------------------------------------------------------
                                                                                   

consensus_10728#0      AGTTGAAACAGAAATTACTCAACTTTATACTCTTGATGATAGTCAATTAAAAATTCTTGC 1250
consensus_10728#1      ------------------------------------------------------------
consensus_10728#2      ------------------------------------------------------------
                                                                                   

consensus_10728#0      CGGTGATAGACAAGGACAAATTCATTATTTCGTGCTATTGTGATATGTACACACACATAC 1310
consensus_10728#1      ------------------------------------------------------------
consensus_10728#2      ------------------------------------------------------------
                                                                                   

consensus_10728#0      ATACATACCTACATAGAAAGTTTGTATGTTGAAAAACTGTTTTGTTTCTAATTGAATAAT 1370
consensus_10728#1      ------------------------------------------------------------
consensus_10728#2      ------------------------------------------------------------
                                                                                   

consensus_10728#0      GTTTTTTCTGTTAATTTTACTTTTTATATTTTACCATAGAACTAACTTCTTTCTTTCATA 1430
consensus_10728#1      ------------------------------------------------------------
consensus_10728#2      ------------------------------------------------------------
                                                                                   

consensus_10728#0      ATTATTCCCTGAATGATCTATGCAAATAAATAATCATAATGGGATTGTTAGATTTTAAAT 1490
consensus_10728#1      ------------------------------------------------------------
consensus_10728#2      ------------------------------------------------------------
                                                                                   

consensus_10728#0      ATGTTAACCTGTTCTTTTAAAGTATATT 1518
consensus_10728#1      ----------------------------
consensus_10728#2      ----------------------------