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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10756#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 993 fasta sequence
[GACTGGTTTAGGATTAAGCATAAAGTTAAGAAATAACTCTTTGCATCGGTATGATGGCTTTGGTGAAATCGAAGCAGAAAAGGTTGGGAGCTTTTTTAAAAAGTATTTCGACGTCGAAATTGTGAAGCGTGAGCTGTGCTACAAAGGCTACAATTGGGGAGACGTGGATTTCGATGGCGATGTTCTCGAGTTTTCAGTTAAAAACGCTATGGCTTTTGAGGTTCCTCTAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAAATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCAAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC-GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA-GTCCCCGGAAGCTTCTCTGCAAAAGGCGGTGGTTGTGCAGTTGCATGCAGTTATAAAGCGTCTGTTGGTTTGTTGTATCCATTAGAGAGAGGATTTACATTCGTGCCCCGTCCTCCGATTTCCATACGTTTCGACGAAATAGTAGCTGTACATTTTCCCGTGGGACAGGTGCTCAAAGATCT]
[+] EMBL CD182121 [GACTGGTTTAGGATTAAGCATAAAGTTAAGAAATAACTCTTTGCATCGGTATGATGGCTTTGGTGAAATCGAAGCAGAAAAGGTTGGGAGCTTTTTTAAAAAGTATTTCGACGTCGAAATTGTGAAGCGTGAGCTGTGCTACAAAGGCTACAATTGGGGAGACGTGGATTTCGATGGCGATGTTCTCGAGTTTTCAGTTAAAAACGCTATGGCTTTTGAGGTTCCTCTAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAAATTTGCTTATCTGNAATGCGTCT ]
[+] EMBL CD170558 [ TAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAAATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCAAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA GTCCCCGGAAG ]
[+] EMBL CD170499 [ TAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAGATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCGAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCTGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGACCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACANGT CCCGGAA ]
[+] EMBL CD170581 [ TAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAAATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCAAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTGGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGCGTTCAAGGTTCTGTATGATCAGAAAGTTACA GTCCCCGGA ]
[+] EMBL CD170518 [ TAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAAATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCAAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTC AGGNTCTGTATGATCAGAAAGTTACA GTCCCCGGA ]
[+] EMBL CD170651 [ TAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAAATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCAAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGTCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGT GCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA GNTCCCGGA ]
[+] EMBL CD170507 [ TAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAAATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCAAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCATCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGNTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGNTGTGGCTCGCGTGTTC AGGTTCTGTATGATCAG AAGTTACA GTCCCCGGAA ]
[+] EMBL CD170662 [ TAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAGATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCGAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCTGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGACCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTT AAGGTTCTGTATGATCAGAAAGNTACA GTCCCCGGA ]
[+] EMBL CD170548 [ TAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAAATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCAAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTC AGGNTCTGTATGATCAGAAAGNTACA GTCCCCGGA ]
[+] EMBL CD170516 [ TAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAAATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCAAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTC AGGTTCTGTATGATCAGAAAGTTACA GTCCCGGGA ]
[+] EMBL CD170531 [ TAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGGGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAAATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCAAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAGGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA GTCCCCGGAAG ]
[+] EMBL CD148287 [ TATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATGATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA GTCCCCGGAAGCTTCTCTGCANAAGGCGGTGGTTGTGCAGTTGCATGCAGTTATAAAGCGTCTGTTGGTTTGTTGTATCCATTANAGAGAGGATTTACAT ]
[+] EMBL CD148358 [ TATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAATTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCGTCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA GTCCCCGGAAGCTTCTCTGCANAAGGCGGTGGTTGTGCAGTTGCATGCAGTTATAAAGCGTCTGTTGGTTTGTTGTATCCATTANAGAGAGGATTTACAT ]
[+] EMBL CD148362 [ TATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGCGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTC ]
[+] EMBL CD148302 [ TATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA GTCCCCGGAAGCTTCTCTGNCAAAGGCGGTGGTTGTGCAGTTGCATGCAGTTATAAAGCGTCTGTTGGTTTGTTGTATCCATTACAGAGAGGATTTACAT ]
[+] EMBL CD165879 [ TAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA GTCCCCGGAAGCTTCTCTGCAAAAGGCGGTGGTTGTG ]
[+] EMBL CD165815 [ TAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTAT ]
[+] EMBL CD164396 [ cgtgggcacTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGGAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA GTCCCCGGAAGCTTCTCTGCAAAAGGCGGTGGTTGTGCAGTTGCATGCAGTTATAAAGCGTCTGTTGGTTTGTTGTATCCATTAGAGAGAGG ]
[-] EMBL CD072138 [ TCATCCCGAT ATCGGGCAGATATTCTTGNCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA GTCCCCGGAAGCTTCTCTGCAAAAGGCGGTGGTTGTGCAGTTGCATGCAGTTATAAAGCGTCTGTTGGTTTGTTGTATCCATTAGAGAGAGGATTTACATT ]
[-] EMBL CD165872 [ ATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA GTCCCCGGAAGCTTCTCTGCAAAAGGCGGTGGTTGTGCAGTTGCATGCAGTTATAAAGCGTCTGTTGGTTTGTTGTATCCATTAGAGAGAGGATTGACATTCGTGCCCCGTCCTCCGATTTCCATACGTTTCGACGAAATAGTAGCTGTACATTTTCCCGTGGGACAGGTGCTCAAAGATCT]
consensusID : consensus_10756#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 485 fasta sequence
[GGTATGATGGCTTTGGTGAAATCGAAGCAGAAAAGGTTGGGAGCTTTTTTAAAAAGTATTTCGACGTCGAAATTGTGAAGCGTGAGCTGTGCTACAAAGGCTACAATTGGGGAGACGTGGATTTCGATGGCGATGTTCTCGAGTTTTCAGTTAAAAACGCTATGGCTTTTGAGGTTCCTCTAAGCAATGTTGCAAATGCNTGTTTTGAACAAAAACGAGGATTATTTTNTGAATTTCACCNTGAATNGATGAAGCTNGAAATTNTGCTTATTCTGAAATGCGTTCTNGTACACTTCACGGGAACTGAAGCNNTGATAGGGNNAAGGCAAANNGCCCCCGNNCTATATATGTNNCTAAAGTTATCTTCTAAAAGGCAGNNATATTATTNNCAAGTTACNNGGGTGATTGTCTTNNGGCTGAATTNNCAAACAATTNNGCAGNTGTCTNTCAACCTCNGTGGCCGNTTATGATGTTAAGTTATATCC]
[-] EMBL CD186256 [GGTATGATGGCTTTGGTGAAATCGAAGCAGAAAAGGTTGGGAGCTTTTTTAAAAAGTATTTCGACGTCGAAATTGTGAAGCGTGAGCTGTGCTACAAAGGCTACAATTGGGGAGACGTGGATTTCGATGGCGATGTTCTCGAGTTTTCAGTTAAAAACGCTATGGCTTTTGAGGTTCCTCTAAGCAATGTTGCAAATGCNTGTTTTGAACAAAAACGAGGATTATTTTNTGAATTTCACCNTGAATNGATGAAGCTNGAAATTNTGCTTATTCTGAAATGCGTTCTNGTACACTTCACGGGAACTGAAGCNNTGATAGGGNNAAGGCAAANNGCCCCCGNNCTATATATGTNNCTAAAGTTATCTTCTAAAAGGCAGNNATATTATTNNCAAGTTACNNGGGTGATTGTCTTNNGGCTGAATTNNCAAACAATTNNGCAGNTGTCTNTCAACCTCNGTGGCCGNTTATGATGTTAAGTTATATCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10756#0 GACTGGTTTAGGATTAAGCATAAAGTTAAGAAATAACTCTTTGCATCGGTATGATGGCTT 60
consensus_10756#1 -----------------------------------------------GGTATGATGGCTT 13
*************
consensus_10756#0 TGGTGAAATCGAAGCAGAAAAGGTTGGGAGCTTTTTTAAAAAGTATTTCGACGTCGAAAT 120
consensus_10756#1 TGGTGAAATCGAAGCAGAAAAGGTTGGGAGCTTTTTTAAAAAGTATTTCGACGTCGAAAT 73
************************************************************
consensus_10756#0 TGTGAAGCGTGAGCTGTGCTACAAAGGCTACAATTGGGGAGACGTGGATTTCGATGGCGA 180
consensus_10756#1 TGTGAAGCGTGAGCTGTGCTACAAAGGCTACAATTGGGGAGACGTGGATTTCGATGGCGA 133
************************************************************
consensus_10756#0 TGTTCTCGAGTTTTCAGTTAAAAACGCTATGGCTTTTGAGGTTCCTCTAAGCAATGTTGC 240
consensus_10756#1 TGTTCTCGAGTTTTCAGTTAAAAACGCTATGGCTTTTGAGGTTCCTCTAAGCAATGTTGC 193
************************************************************
consensus_10756#0 AAATGCT-GTTTTGAACAAAAACGAG-ATTATTTTT-GAATTTCACCTGAA--TGATGAA 295
consensus_10756#1 AAATGCNTGTTTTGAACAAAAACGAGGATTATTTTNTGAATTTCACCNTGAATNGATGAA 253
****** ****************** ******** ********** * ******
consensus_10756#0 GCTGAAA--TTTGCTTAT-CTGAAATGCGTC--TGTACACTCC--GGGAACTGAAGCTG- 347
consensus_10756#1 GCTNGAAATTNTGCTTATTCTGAAATGCGTTCTNGTACACTTCACGGGAACTGAAGCNNT 313
*** ** * ******* *********** ******* * ************
consensus_10756#0 ---ATAGGGAAGGCAAAGC--CCCCGCTATATAT-----TCTAAAGTTACTC---AAAAG 394
consensus_10756#1 GATAGGGNNAAGGCAAANNGCCCCCGNNCTATATATGTNNCTAAAGTTATCTTCTAAAAG 373
* * ******** ***** ***** ********* *****
consensus_10756#0 GCAGATAT----TATTCAAGTTACGGG--TGATT---TCTTGGCTGAATTCA--AACAAT 443
consensus_10756#1 GCAGNNATATTATTNNCAAGTTACNNGGGTGATTGTCTTNNGGCTGAATTNNCAAACAAT 433
**** ** * ******** * ***** * ********* ******
consensus_10756#0 TGCA---GTGTCTT-CAACCTCG-TGGCCGTT-ATGATGTTAAGTTATATCCAAGTTTTA 497
consensus_10756#1 TNNGCAGNTGTCTNTCAACCTCNGTGGCCGNTTATGATGTTAAGTTATATCC-------- 485
* ***** ******* ****** * *******************
consensus_10756#0 TCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGA 557
consensus_10756#1 ------------------------------------------------------------
consensus_10756#0 TGGTGCTTCCTCATCCCGATAATCGGCAGATATTCTTTGCTGTTCAACTTGATCCACCGA 617
consensus_10756#1 ------------------------------------------------------------
consensus_10756#0 TCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACA 677
consensus_10756#1 ------------------------------------------------------------
consensus_10756#0 TAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAA 737
consensus_10756#1 ------------------------------------------------------------
consensus_10756#0 CTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATG 797
consensus_10756#1 ------------------------------------------------------------
consensus_10756#0 ATCAGAAAGTTACAGTCCCCGGAAGCTTCTCTGCAAAAGGCGGTGGTTGTGCAGTTGCAT 857
consensus_10756#1 ------------------------------------------------------------
consensus_10756#0 GCAGTTATAAAGCGTCTGTTGGTTTGTTGTATCCATTAGAGAGAGGATTTACATTCGTGC 917
consensus_10756#1 ------------------------------------------------------------
consensus_10756#0 CCCGTCCTCCGATTTCCATACGTTTCGACGAAATAGTAGCTGTACATTTTCCCGTGGGAC 977
consensus_10756#1 ------------------------------------------------------------
consensus_10756#0 AGGTGCTCAAAGATCT 993
consensus_10756#1 ----------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||