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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10766#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1728 fasta sequence
[TGGTTGATGGCAAACAACTGACTTTAAAGATTGT-TCAGTGTTAGTTCTTATAAATCCTGGAGGAAGACATTCGATTATTGAATAAACATCAGTACAGACATTGGTCAAAACAAAAATAAGATAACTTCAAAAGATGAAATTAGTAGGAGATATCTATTTTTCAGAAAAAGTAGAAATCAAAACTCATGTGATGGACAGTTTTATATAAATATGTGTATCTTTAAAATAAAAAAACACCTAAATATCTTCAGAGATTTGGTAGAGATAAACATTTTCCAGGAGGTATTACTGGTTTAGTTCTAAAGTGTGGCGATAGTAGGAAATCCTGTGACACTGGCCAGAGCGGAATTCAATGCCATACTTCGATTAGCCGAAATGGCGAACAAAGGAATATGGTAATACTTGCATGGTACACGTGTACATCGACCTTTAGCAGCATCGCGACATACAGTCACACGTCCTTGATTAACTTCCACATTTTCGTCAACTAGATGGACGTAACGGCACTCAGAGTTACGACGACATTTGCCAGCTTTAAAATCACGACATATCGGCAA-TGTTTCCAACAAATGGCCTTTTTCATTAATGTAAGCCACATTGGTCATTGGATTCGTTGAACAAAAGCTGGTCCCATATAGTCCAGACGAGAGATGTCCTAATGCACCCGGAACTGGACATGATGAATCCAAAACGCAGCCATGATTTTGAAGAGCAGGGATCGGAGGTAATCGTGAAGTGTCGTTTTGTGACAAATAGCCCACTGCTGCCACTTGTGCAGCAGTTAGATGAGCTTGTTGACTTCGAAGAATAAGTGACAACAACAGAGCTTGTTGCTGGTGTTGAAAAGTATTACTTGAAGCATTTGTATGAACATCATGAGCTGGAGGTTGATGGGCTGCTGCCAAAGCTGTGGCGGAGGTTAAGGTGGAAGACGGTACATATGAT-GAATACAAACCAGATCCAGGTAACTGCTGATTCGATACTGTCGACAACTGAGTTCGTAACAATTGATGAGACTGCAGTTGTTGTTGCTGTTGTATTAAAAAGTTATTTAGCGCTAATGCTGCAGCTGCTGAAGACATTGGATTAGGTGCATCACAACCATTGTTCATGGAATATAATGGTGGATATATGAATTGTGATGGAGTGTAAAGTGATGGAGCAGGTTGTGAAGAAAACGGAAGACCGTAAATACTCATACTTAACGGATTTAACATATTCGTTACCTCAGGATTAACATGAGATGTTCCTATATCTGTACAAGAATTTATTGGGGTAAGCCCAGGATTGAAAGACCCACAAGAGAGAAAGGTAGGAAATGAAGTTACAGAATCAGGCATATGACATTTTGTTTCACCATTTTGACAAGACCTTTCCAGTTTTTCGTCACCGTTACATGCGACAGTTGATTCTTTATTCTGACTTGTTCCGTCTAATGAAGATGAGGTAGACAAATTTGCTCGTTTTGTAGGTAACCATTTCTCAGAAGCAACTGAAGAGGATGTATCATTATTGATTGTTGACTTAGAAATAACCGAATCATGAGGAAACATTGAGCTTGAAGATAGTGTAGATGATGTTGGCAACACACCAGCAGCTTGATTTGCCTGTTGTAGGACAGCTGCCGCTGCTAATAACGCTGATGCACTTAAAGATGTCGGGTCAGGTGCAGAATTTAGAGGAGTTAAGTATGTTCTATAAACTGATCCCCTTTCCATCCCTNCAANT]
[+] EMBL CD115226 [TGGTTGATGGCAAACAACTGACTTTAAAAATTGT TCAGTGTTAGTTCTTATAAATCCTGGAGGAAGACATTCGATTATTGAATAAACATCAGTACAGACATTGGTCAAAACAAAAATAAGATAACTTCAAAAGATGAAATTAGTAGGAGATATCTATTTTTCAGAAAAAGTAGAAATCAAAACTCATGTGATGGACAGTTTTATATAAATATGTGTATCTTTAAAATAAAAAAACACCTAAATATCTTCAGAGATTTGGTAGAGATAAACATTTTCCAGGAGGTATTACTGGTTTAGTTCTAAAGTGTGGCGATAGTAGGAAATCCTGTGACACTGGCCAGAGCGGAATTCAATGCCATACTTCGATTAGCCGAAATGGCGAACAAAGGAATATGGTAATACTTGCATGGTACACGTGTACATCGACCTTTAGCAGCATCGCGACATACAGTCACACGTCCTTGATTAACTTCCACATTTTCGTCAACTAGATGGACGTAACGGCACTCAGAGTTACGACGACATTTGCCAGCTNT AAATCACGACATATCGGGCA TGTTTCCAACANATGGCCTTTTTCATTAATGTAAGCCACATTGGTCATTGGATTCGTTGAACANAAGCTGGTCCCATATAGTCCAGACGAGAGATGTCCCTATGCACCCCGGACTGGACAT ]
[-] EMBL CD154201 [TGGTTGATGGCNAACAACTGACTTNAAAGA TGTCNNAGTGTTAGTTCNTATAAATCCTGGAGGAAGACATTCGATTATTGAATAAACATCAGTACAGACATTGGTCAAAACAAAAATAAGATAACTTCAAAAGATGAAATTAGTAGGAGATATCTATTTNTCAGAAAAAGTAGAAATCAAAACTCATGTGATGGACAGTTTTATATAAATATGTGTATCTTTAAAATAAAAAAACACCTAAATATCTTCAGAGATTTGGTAGAGATAAACATTTTCCAGGAGGTATTACTGGTTTAGTTCTAAAGTGTGGCGATAGTAGGAAATCCTGTGACACTGGCCAGAGCGGAATTCAATGCCACACTTCGATTAGCCGAAATGGCGAACAAAGGAATATGGTAATACTTGCATGGTACACGTGTACATCGACCTTTAGCAGCATCGCGACATACAGTCACACGTCCTTGATTAACTTCCACATTTTCGTCAACTAGATGGACGTAACGGCACTCAGAGTTACGACGACATTTGCCAGCTTTAAAATCACGACATATCGGCAA TGTTTCCAACAAATGGCCTTTTTCATTAATGTAAGCCACATTGGTCATTGGATTCGTTGAACAAAAGCTGGTCCCATATAGTCCAGACGAGAGATGTCCTAA ]
[+] EMBL CD115818 [TGGTTGATGGCAAACAACTGACTTTAAAGATTGT TCAGTGTTAGTTCTTATAAATCCTGGAGGAAGACATTCGATTATTGAATAAACATCAGTACAGACATTGGTCAAAACAAAAATAAGATAACTTCAAAAGATGAAATTAGTAGGAGATATCTATTTTTCAGAAAAAGTAGAAATCAAAACTCATGTGATGGACAGTTCTATATAAATATGTGTATCTTTAAAATAAAAAAACACCTAAATATCTTCAGAGATTTGGTAGAGATAAACATTTTCCAGGAGGTATTACTGGTTTAGTTCTAAAGTGTGGCGATAGTAGGAAATCCTGTGACACTGGCCAGAGCGGAATTCAATGCCATACTTCGATTAGCCGAAATGGCGAACAAAGGAATATGGTAATACTTGCATGGTACACGTGTACATCGACCTTTAGCAGCATCGCGACATACAGTCACACGTCCTTGATTAACTTCCACATTTTCGTCAACTAGATGGACGT ]
[-] EMBL CD115874 [ GGTTGATGGCAAACAATTGAC TTAAAGGTTGT TCAGTGTTAGTTCTTATAAATCCTGGAGGAAGACATTCGATTATTGAATAAACATCAGTACAGACATTGGTCAAAACAAAAATAAGATAACTTCAAAAGATGAAATTAGTAGGAGATATCTATTTTTCAGAAAAAGTAGAAATCAAAACTCATGTGATGGACAGTTTTATAGAAATATGTGTATCTTTAAAATAAAAAAACACCTAAATATCTTCAGAGATTTGGTAGAGATAAACATTTTCCAGGAGGTATTACTGGTTTAGTTCTAAAGTGTGGCGATAGTAGGAAATCCTGTGACACTGGCCAGAGCGGAATTCAATGCCATACTTCGATTAGCCGAAATGGCGAACAAAGGAATATGGTAATACTTGCATGGTACACGTGTACATCGGCCTTTAGCAGCATCGCGACATACAGTCACACGTCCTTGATTAACTTCCACATTTTCGTCAACTAGATGGACGTAACGGCACTCAGAGTTACGACGTCATTTGCCAGCTTTAAAATCACGACATATCGGCAA TGTTTCCAACAAATGGCCTTTTTCATTAATGTAAGCCACATTGGTCATTGGATTCGTTGAACAAAAGCTGGTCCCATATAGTCCAGACGAGAGATGTCCTAA ]
[-] EMBL CD115479 [ gtaATGGCAAACAACTGGC TTAAAGGTGGT TCAGTGGTAGTTCTTATAAATCCTGGAGGAAGACATTCGATTAGTGAATAAACATCAGTACAGACATTGGTCAAAACAGAAATAAGATAACTCCGAAAGATGAAATTAGTAGGAGATATCTA TTTTCAGAAAAAGTAGAAATCAAAACTCATGTGATGGACAGTTTTATAGAAATATGTGTATCTTTAAAATAAAAGAACACCTAAATATCTTCAGAGATTTGGTAGAGATAAACATTTTCCAGGAGGTATGACTGGTTTAGTTCTAAAGTGTGGCGATAGTAGGAAATCCTGTGACACTGGCCAGAGCGGAATTCAATGCCATACTTCGATTAGCCGAAATGGCGAACAAAGGAATATGGTAATACTTGCATGGTACACGTGTACATCGGCCTTTAGCAGCATCGCGACATACAGTCACACGTCCTTGATTAACTTCCACATTTTCGTCAACTAGATGGACGTAACGGCACTCAGAGTTACGACGTCATTTGCCAGCTTTAAAATCACGACATATCGGCAACTGTTTCCAACAAATGGCCT ]
[-] EMBL CD151672 [ ATTTGGTAGAGAT AACATTTTCCAGGAGGTATTACTGGTTTAGTTCTAAAGTGTGGCGATAGTAGGAAATCCTGTGACACTGGCCAGAGCGGAATTCAATGCCATACTTCGATTAGCCGAAATGGCGAACAAAGGAATATGGTAATACTTGCATGGTACACGTGTACATCGACCTTTAGCAGCATCGCGACATACAGTCACACGTCCTTGATTAACTTCCACATTTTCGTCAACTAGATGGACGTAACGGCACTCAGAGTTACGACGACATTTGCCAGCTTTAAAATCACGACATATCGGCAA TGTTTCCAACAAATGGCCTTTTTCATTAATGTAAGCCACATTGGTCATTGGATTCGTTGAACAAAAGCTGGTCCCATATAGTCCAGACGAGAGATGTCCTAATGCACCCGGAACTGGACATGATGAATCCAAAACGCAGCCATGATTTTGAAGAGCAGGGTTCGGAGGTAATCGTGAAGTGTCGTTTTGTGACAAATAGCCCACTGCTGCCACTTGTGCAGCAGTTAGATGAGCTTGTTGACTTCGAAGAATAAGTGACAGCA ]
[-] EMBL CD115744 [ TGGTAGAGAT AACATTTTCCAGGAGGTATTACTGGTTTAGTTCTACAGTGTGGCGATAGTAGGAAATCCTGTGACACTGGCCAGAGCGGAATTCAATGCCATACTTCGATTAGCCGAAATGGCGAACAAAGGAATATGGTAATACTTGCATGGTACACGTGTACATCGACCTTTAGCAGCATCGCGACATACAGTCACACGTCCTTGATTAACTTCCACATTTTCGTCAACTAGATGGACGTAACGGCACTCAGAGTTACGACGACATTTGCCAGCTTTAAAATCACGACATATCGGCAA TGTTTCCAACAAATAGCCATTTTCATTAATGTAAGCCACATTGGTCATTGGATTCGTTGAACAAAAGCTGGTCCCATATAGTCCAGACGAGAGATGTCCTAATGCACCCGGAACTGGACATGA ]
[+] EMBL CD162846 [ CAATGCCATACTTCGATTAGCCGAAATGGCGAACAAAGGAATATGGTAATACTTGCATGGTACACGTGTACATCGACCTTTAGCAGCATCGCGACATACAGTCACACGTCCTTGATTAACTTCCACATTTTCGTCAACTAGATGGACGTAACGGCACTCAGAGTTACGACGACATTTGCCAGCTTTAAAATCACGACATATCGGCAA TGTTTCCAACAAATGGCCTTTTTCATTAATGTAAGCCACATTGGTCATTGGATTCGTTGAACAAAAGCTGGTCCCATATAGTCCAGACGAGAGATGTCCTAATGCACCCGGAACTGGACATGATGAATCCAAAACGCAGCCATGATTTTGAAGAGCAGGGATCGGCGGTAATCGTGAAGTGTCGTTTTGTGACAAATAGCCCACTGCTGCCACTTGTGCAGCAGTTAGATGAGCTTGTTGACTTCGAAGAATAAGTGACAACAACAGAGCTTGTTGCTGGTGTTGAAAAGTATTACTTGAAGCAT ]
[-] EMBL CD162752 [ AATGCCATACTTCGATTAGCCGAAATGGCGAACAAAGGAATATGGTAATACTTGCATGGTACACGTGTACATCGACCTTTAGCAGCATCGCGACATACAGTCACACGTCCTTGATTAACTTCCACATTTTCGTCAACTAGATGGACGTAACGGCACTCAGAGTTACGACGACATTTGCCAGCTTTAAAATCACGACATATCGGCAA TGTTTCCAACAAATGGCCTTTTTCATTAATGTAAGCCACATTGGTCATTGGATTCGTTGAACAAAAGCTGGTCCCATATAGTCCAGACGAGAGATGTCCTAATGCACCCGGAACTGGACATGATGAATCCAAAACGCAGCCATGATTTTGAAGAGCAGGGATCGGCGGTAATCGTGAAGTGTCGTTTTGTGACAAATAGCCCACTGCTGCCACTTGTGCAGCAGTTAGATGAGCTTGTTGACTTCGAAGAATAAGTGACAACAACAGAGCTTGTTGCTGGTGTTGAAAAGTATTACTTGAAGCATc ]
[+] EMBL CD063496 [ ATGGCGAACAAAGGAATATGGTAATACTTGCATGGTACACGTGTACATCGACCTTTAGCAGCATCGCGACATACAGTCACACGTCCTTGATTAACTTCCACATTTTCGTCAACTAGATGGACGTAACGGCACTCAGAGTTACGACGACATTTGCCTGCTTTAAAATCACGACATATCGGCAA TGTTTCCAACAAATGGCCTTTTTCATTAATGTAAGCCACATTGGTCATTGGATTCGTTGAACAAAAGCTGGTCCCATATAGTCCAGACGAGAGATGTCCTAATGCACCCGGAACTGGACATGATGAATCCAAAACGCAGCCATGATTTTGAAGAGCAGGGATCGGAGGTAATCGTGAAGTGTCGTTTTGTGACAAATAGCCCACTGCTGCCACTTGTGCAGCAGTTAGATGAG ]
[-] EMBL CD116197 [ ACCTTTAGCAGCATCGCGACATACAGTCACACGTCCTTGATTAACTTCCACATTTTCGTCAACTAGATGGACGTAACGGCACTCAGAGTTACGACGACATTTGCCAGCTTTAAAATCACGACATATCGGCAA TGTTTCCAACAAATGGCCTTTTTCATTAATGTAAGCCACATTGGTCATTGGATTCGTTGAACAAAAGCTGGTCCCATATAGTCC ]
[-] EMBL BG931269 [ TCGGAGGTAATCGTGAAGTGTCGTTTTGTGACAAATAGCCCACTGCTGCCACTTGTGCAGCAGTTAGATGAGCTTGTTGACTTCGAAGAATAAGTGACAACAACAGAGCTTGTTGCTGGTGTTGAAAAGTATTACTTGAAGCATTTGTATGAACATCATGAGCTGGAGGTTGATGGGCTGCTGCCAAAGCTGTGGCGGAGGTTAAGGTGGAAGACGGTACATATGAT GAATACAAACCAGAT ]
[+] EMBL CD164796 [ AGCAGTTAGATGAGCTTGTTGACTTCGAAGAATAAGTGACAACAACAGAGCTTGTTGCTGGTGTTGAAAAGTATTACTTGAAGCATTTGTATGAACATCATGAGCTGGAGGTTGATGGGCTGCTGCCAAAGCTGTGGCGGAGGTTAAGGTGGAAGACGGTACATATGAT GAATACAAACCAGATCCAGGTAACTGCTGATTCGATACTGTCGACAACTGAGTTCGTAACAATTGATGAGACTGCAGTTGTTGTTGCTGTTGTATTAAAAAGTTATTTAG ]
[-] EMBL CD116937 [ CATAT ATGGAATACAACCCAGATCCAGGTAACTGCTGATTAGATACTGTGGACAACTGAGTTCGTAACAATTGATGAGACTGCAGTTGTTGTTGCTGTTGTATTAAAAAGTTATTTAGCGCTAATGCTGCAGCTGCTGAAGACATTGGATTAGGTGCATCACAACCATTGTTCATGGAATATAATGGTGGATATATGAATTGTGATGGAGTGTAAAGTGATGGAGCAGGTTGTGAAGAAAACGGAAGACCGTAAATACTCATACTTAACGGATTTAACATATTCGTTACCTCAGGATTAACATGAGATGTTCCTATATCTGTACAAGAATTTATTGGGGTAAGCCCAGGATTGAAAGACCCACAAGAGAGAAAGGTAGGAAATGAAGTTACAGAATCAGGCATATGACATTTTGTTTCACCATTTTGACAAGACCTTTCCAGTTTTTCGTCAC ]
[+] EMBL CD178488 [ AAGTTACAGAATCAGGCATATGACATTTTGTTTCACCATTTTGACAAGACCTTTCCAGTTTTTCGTCACCGTTACATGCGACAGTTGATTCTTTATTCTGACTTGTTCCGTCTAATGAAGATGAGGTAGACAAATTTGCTCGTTTTGTAGGTAACCATTTCTCAGAAGCAACTGAAGAGGATGTATCATTATTGATTGTTGACTTAGAAATAACCGAATCATGAGGAAACATTGAGCTTGAAGATAGTGTAGATGATGTTGGCAACACACCAGCAGCTTGATTTGCCTGTTGTAGGACAGCTGCCGCTGCTAATAACGCTGATGCACTTAAAGATGTCGGGTCAGGTGCAGAATTTAGAGGAGTTAAGTATGTTCTATAAACTGATCCCCTTTCCATCCCTNCAANT]
consensusID : consensus_10766#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 789 fasta sequence
[CAAACATGTTACGAGCATTGCAATTATTAAAGCTTAAGAATTTTGACTCAGAAGCAACTGAAGAGGATGTATCATTATTGATTGTTGACTTAGAAATAACCGAATCATGAGGAAACATTGAGCTTGAAGATAGTGTAGATGATGTTGGCAACACACCAGCAGCTTGATTTGCCTGTTGTAGGACAGCTGCCGCTGCTAATAACGCTGATGCACTTAAAGATGTCGGGTCAGGTGCAGAATTTAGA-GGAGTTAAGTATGTTCCATAAACTGATCCCCCAACAGTTGATTGAAGTAATGTGGTAGGTGGCCATCTAAGACTTGAAGGGCAACTAGCTACTGAACTGAGAATGGGTAAACCAGTCGGTAGCGTCTGTTGTAGCGGTTGCATTGGAATGAGATTGGAAGTTCCTAACTCCGACAAACGTTGTTGATTTTCCAATAGTTTCCTTTGTTCATCGCCACGTTTAATAATAGCTTCAATTTGGTGTGGTGGTGGGTGATAATATTTACAGTGAGAAAACTTGCAGAGTTTCCTTTTAATGAAGTCGTAACACACTGTTACATAGCCGTTTTCTACTCGGACAGTTACAGGTGGGTGAGCGTAAGGACATGTACTTCCCAAAACACAACAATGAAAGTTTGATTCGTTTTCATTTTGACAGCTTGTAGTAGATGAGCACTCATTTTTTGTACTAGTGTCTTCCAACTTTATAGAACATTTATTTCCAATGTTTACGGGCTCTTTCTCAGATCTGATAGTATTATTTTGCAAAGGTGAGTTAGATGTTC]
[+] EMBL CD116132 [CAAACATGTTACGAGCATTGCAATTATTAAAGCTTAAGAATTTTGACTCAGAAGCAACTGAAGAGGATGTATCATTATTGATTGTTGACTTAGAAATAACCGAATCATGAGGAAACATTGAGCTTGAAGATAGTGTAGATGATGTTGGCAACACACCAGCAGCTTGATTTGCCTGTTGTAGGACAGCTGCCGCTGCTAATAACGCTGATGCACTTAAAGATGTCGGGTCAGGTGCAGAATTTAGA GGAGTTAAGTATGTTCCATAAACTGATCCCCCAACAGTTGATTGAAGTAATGTGGTAGGTGGCCATCTAAGACTTGAAGGGCAACTAGCTACTGAACTGAGAATGGGTAAACCAGTCGGTAGCGTCTGTTGTAGCGGTTGCATTGGAATGAGATTGGAAGTTCCTAACTCCGACAAACGTTGTTGATTTTCCAATAGTTTCCTTTGTTCATCGCCACGTTTAATAATAGCTTCAATTTGGTGTGGTGGTGGGTGATAATATTTACAGTGAGAAAACTTGCAGAGTTTCCTTTTAATGAAGTCGTAACACACTGTT ]
[-] EMBL CD116075 [ TGATGCACTTAAAGATGTCGGGTCAGGTGCAGAA TTAGAGGGAGTTAAGTATGTTCCATAAACTGATCCCCCAACAGTTGATTGAAGTAATGTGGTAGGTGGCCATCTAAGACTTGAAGGGCAACTAGCTACTGAATTGAGAATGGGTAAACCAGTCGGTAGCGTCTGTTGTAGCGGTTGCATTGGAATGAGATTGGAAGTTCTTAACTCCGACAAACGTTGTTGATTTTCCAATAGTTTCCTTTGTTCATCGCCACGTTTAATAATAGCTTCAATTTGGTGTGGTGGTGGGTGATAATATTTACAGTGAGAAAACTTGCAGAGTTTCCTTTTAATGAAGTCGTAACACACTGTTACATAGCCGTTTTCTACTCGGACAGTTACAGGTGGGTGAGCGTAAGGACATGTACTTCCCAAAACACAACAATGAAAGTTTGATTCGTTTTCATTTTGACAGCTTGTAGTAGATGAGCACTCATTTTTTGTACTAGTGTCTTCCAACTTTATAGAACATTTATTTCCAATGTTTACGGGCTCTTTCTCAGATCTGATAGTATTATTTTGCAAAGGTGAGTTAGATGTTC]
[+] EMBL CD149594 [ TAACACACTGTTACATAGCCGTTTTCTACTCGGACAGATACAGGTGGGTGAGCGTAAGGACATGTACTTCCCAAAACACAACAATGAAAGTTTGATTCGTTTTCATTTGGA ]
consensusID : consensus_10766#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 637 fasta sequence
[AGACTATTCNTAATTGATTAAAGTAAAAGAAAAGATTATCAAAATACTGAATAAATTTGGGACGAGAAAAAAATTAAGAGAAAATGACGTTGGCAAAACATGGTTGATGGCAAACAACTGACTTTAAAGATTGTTCAGTGTTAGTTCTTATAAATCCTGGAGGAAGACATTCGATTATTGAATAAACATCAGTACAGACATTGGTCAAAACAAAAATAAGATAACTTCAAAAGATGAAATTAGTAGGAGATATCTATTTTTCAGAAAAAGTAGAAATCAAAACTCATGTGATGGACAGTTTTATATAAATATGTGTATCTTTAAAATAAAAAAACACCTAAATATCTTCAGAGATTTGGTAGAGATAAACATTTTCCAGGAGGTATTACTGGTTTAGTTCTAAAGTGTGGCGATAGTAGGAAATCCTGTGACACTGGCCAGAGCGGAATTCAATGCCATACTTCGATTAGCCGAAATGGCGAACAAAGGAATATGGTAATACTTGCATGGTACACGTGTACATCGACCTTTAGCAGCATCGCGACATACAGTCACACGTCCTTGATTAACTTCCACATTTTCTATTAAGTTAGGGAAAAATAGTAATGTTAGTTCATTATAACCAATCTGGCATTTT]
[-] EMBL CD078403 [AGACTATTCNTAATTGATTAAAGTAAAAGAAAAGATTATCAAAATACTGAATAAATTTGGGACGAGAAAAAAATTAAGAGAAAATGACGTTGGCAAAACATGGTTGATGGCAAACAACTGACTTTAAAGATTGTTCAGTGTTAGTTCTTATAAATCCTGGAGGAAGACATTCGATTATTGAATAAACATCAGTACAGACATTGGTCAAAACAAAAATAAGATAACTTCAAAAGATGAAATTAGTAGGAGATATCTATTTTTCAGAAAAAGTAGAAATCAAAACTCATGTGATGGACAGTTTTATATAAATATGTGTATCTTTAAAATAAAAAAACACCTAAATATCTTCAGAGATTTGGTAGAGATAAACATTTTCCAGGAGGTATTACTGGTTTAGTTCTAAAGTGTGGCGATAGTAGGAAATCCTGTGACACTGGCCAGAGCGGAATTCAATGCCATACTTCGATTAGCCGAAATGGCGAACAAAGGAATATGGTAATACTTGCATGGTACACGTGTACATCGACCTTTAGCAGCATCGCGACATACAGTCACACGTCCTTGATTAACTTCCACATTTTCTATTAAGTTAGGGAAAAATAGTAATGTTAGTTCATTATAACCAATCTGGCATTTT]
[+] EMBL CD115705 [ AACTCATGTGATGGACAGTCATATATAAATATGTGTATCTGTAAAATAAAAAAACACCTAAATATCTTCAGAGATTTGGTAGAGATAAAC ]
consensusID : consensus_10766#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 270 fasta sequence
[AGTACAAAAAATGAGTGCTCATCTACTACAAGCTGTCAAAATGAAAACGAATCAAACTTTCATTGTTGTGTTTTGGGAAGTACATGTCCTTACGCTCACCCACCTGTAACTGTCCGAGTAGAAAACGGCTATGTAACAGTGTGTTACGACTTCATTAAAGTGAGTTTATCCGTACTGTTCAGTCATACTGTGTTTCATTTTTAGTTGTATCCTTGTATTGTTTTTGTAGTGTTTAGCCACCAGTTGTGTTGTGATGATGCTTGGACTGAT]
[+] EMBL CD202696 [AGTACAAAAAATGAGTGCTCATCTACTACAAGCTGTCAAAATGAAAACGAATCAAACTTTCATTGTTGTGTTTTGGGAAGTACATGTCCTTACGCTCACCCACCTGTAACTGTCCGAGTAGAAAACGGCTATGTAACAGTGTGTTACGACTTCATTAAAGTGAGTTTATCCGTACTGTTCAGTCATACTGTGTTTCATTTTTAGTTGTATCCTTGTATTGTTTTTGTAGTGTTTAGCCACCAGTTGTGTTGTGATGATGCTTGGACTGAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10766#0 ------------------------------------------------------------
consensus_10766#2 -AGACTATTCNTAATTGATTAAAGTAAAAGAAAAGATTATCAAAATACTGAATAAATTTG 59
consensus_10766#1 CAAACATGTTACGAGCATTGCAATTATTAAAGCTTAAGAATTTTGACTCAGAAGCAACTG 60
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 -----------------------------------------TGGTTGATGGCAAACAACT 19
consensus_10766#2 GGACGAGAAAAAAATTAAGAGAAAATGACGTTGGCAAAACATGGTTGATGGCAAACAACT 119
consensus_10766#1 AAGAGGATGTATCATTATTGATTGTTGACTTAGAAATAAC-CGAATCATGAGGAAACATT 119
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 GACTTTAAAGATTGTTCAGTGTTAGTTCTTATAAATCCTGGAGGAAGACAT-TCGATTAT 78
consensus_10766#2 GACTTTAAAGATTGTTCAGTGTTAGTTCTTATAAATCCTGGAGGAAGACAT-TCGATTAT 178
consensus_10766#1 GAGCTTGAAGATAGTGTAGATGATGTTGGCAACACACCAGCAGCTTGATTTGCCTGTTGT 179
consensus_10766#3 -------------------------------------------------AGTACAAAAAA 11
*
consensus_10766#0 TGAATAAACATCAGTACAGACATTGGTCAAAACAAAAATAAGATAA-CTTCAAAAGATGA 137
consensus_10766#2 TGAATAAACATCAGTACAGACATTGGTCAAAACAAAAATAAGATAA-CTTCAAAAGATGA 237
consensus_10766#1 AGGACAGCTGCCGCTGCTAATAACGCTGATGCACTTAAAGATGTCG-GGTCAGGTGCAGA 238
consensus_10766#3 TGAGTGCTCATC--TACTACAAGCTGTCAAAATGAAAACGAATCAAACTTTCATTGTTGT 69
* * * * * * * ** * * * *
consensus_10766#0 AATTAGTAGGAGATATCTATTTTTCAGAAAAAGTAGAAATCAAAACTCATGTGATGGACA 197
consensus_10766#2 AATTAGTAGGAGATATCTATTTTTCAGAAAAAGTAGAAATCAAAACTCATGTGATGGACA 297
consensus_10766#1 ATTTAG-AGGAGTTAAGTATGTTCCATAAACTG-ATCCCCCAACAGTTGATTGAAGTAAT 296
consensus_10766#3 GTTTTG--GGAAGTACATGTCCTTACGCTCACCCACCTGTAACTGTCCGAGTAGAAAACG 127
** * *** ** * * * * * * *
consensus_10766#0 GTTTTATATAAATATGTGTATCTTTAAAATAAAAAAACACCTAAATATCTTCAGAGATTT 257
consensus_10766#2 GTTTTATATAAATATGTGTATCTTTAAAATAAAAAAACACCTAAATATCTTCAGAGATTT 357
consensus_10766#1 GTGGTAGGTGGCCATCTAAGACTTGAAGGGCAACTAGCTACTGAAC-TGAGAATGGGTAA 355
consensus_10766#3 GC--TATGTAACAGTGTGTTACGACTTCATTAAAGTGAGTTTATCCGTACTGTTCAGTCA 185
* ** * * * * ** * * *
consensus_10766#0 GGTAGAGATAAACATTTTCCA-GGAGGTATTACTGGTTTAGTTCTAAAGTGTGGCGATAG 316
consensus_10766#2 GGTAGAGATAAACATTTTCCA-GGAGGTATTACTGGTTTAGTTCTAAAGTGTGGCGATAG 416
consensus_10766#1 ACCAGTCGGTAGCGTCTGTTGTAGCGGTTGCATTGGAATGAGATTGGAAGTTCCTAACTC 415
consensus_10766#3 TACTGTGTTT--CATTTTT---AGTTGTATCCTTGTATTGTTTTTGTAGTGTTTAGCCAC 240
* * * * * ** ** * * * *
consensus_10766#0 TAGGAAATCCTGTGACACTGGCCAGAG----CGGAATTCAATGCCATACTTCG-ATTAGC 371
consensus_10766#2 TAGGAAATCCTGTGACACTGGCCAGAG----CGGAATTCAATGCCATACTTCG-ATTAGC 471
consensus_10766#1 CGACAAACGTTGTTGATTTTCCAATAGTTTCCTTTGTTCATCGCCACGTTTAATAATAGC 475
consensus_10766#3 CAGTTG-TGTTGTGATGATGCTTGGACTGAT----------------------------- 270
*** * *
consensus_10766#0 CGAAATGGCGAACAAAGGAATATGGTAATACTTGCAT--GGTACACGTGTACA-TCGACC 428
consensus_10766#2 CGAAATGGCGAACAAAGGAATATGGTAATACTTGCAT--GGTACACGTGTACA-TCGACC 528
consensus_10766#1 TTCAATTTGGTGTGGTGGTGGGTGATAATATTTACAGTGAGAAAACTTGCAGAGTTTCCT 535
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 TTTAGCAGCATCGCGACATACAGTCACACGTCCTTGATTAACTTCCACATTTTCG--TCA 486
consensus_10766#2 TTTAGCAGCATCGCGACATACAGTCACACGTCCTTGATTAACTTCCACATTTTCTATTAA 588
consensus_10766#1 TTTAATGAAGTCGTAACACACTGTTACATAGCCGTTTTCTACTCGGACAGTTAC-----A 590
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 ACTAGATGGACGTAACGGCACTCAGA-GTTACGACGACATTTGCCAGCTTTAAAATCACG 545
consensus_10766#2 GTTAGGGAAAAATAGTAATGTTAGTTCATTATAACCA-ATCTGGCATTTT---------- 637
consensus_10766#1 GGTGGGTGAGCGTAAGGACATGTACTTCCCAAAACACAACAATGAAAGTTTGATTCGTTT 650
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 ACATATCGGCAATGTTTCCAACAAATGGCCTTTTTCATTAATGTAAGCCACATTGGTCAT 605
consensus_10766#2 ------------------------------------------------------------
consensus_10766#1 TCATTTTGACAGCTTGTAGTAGATGAGCACTCATTTTTTGTACTAGTGTCTTCCAACTTT 710
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 TGGATTCGTTGAACAAAAGCTGGTCCCATATAGTCCAGACGAGAGATGTCCTAATGCACC 665
consensus_10766#2 ------------------------------------------------------------
consensus_10766#1 ATAGAACATTTATTTCCAATGTTTACGGGCTCTTTCTCAGATCTGATAGTATTAT-TTTG 769
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 CGGAACTGGACATGATGAATCCAAAACGCAGCCATGATTTTGAAGAGCAGGGATCGGAGG 725
consensus_10766#2 ------------------------------------------------------------
consensus_10766#1 CAAAGGTGAGTTAGATGTTC---------------------------------------- 789
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 TAATCGTGAAGTGTCGTTTTGTGACAAATAGCCCACTGCTGCCACTTGTGCAGCAGTTAG 785
consensus_10766#2 ------------------------------------------------------------
consensus_10766#1 ------------------------------------------------------------
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 ATGAGCTTGTTGACTTCGAAGAATAAGTGACAACAACAGAGCTTGTTGCTGGTGTTGAAA 845
consensus_10766#2 ------------------------------------------------------------
consensus_10766#1 ------------------------------------------------------------
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 AGTATTACTTGAAGCATTTGTATGAACATCATGAGCTGGAGGTTGATGGGCTGCTGCCAA 905
consensus_10766#2 ------------------------------------------------------------
consensus_10766#1 ------------------------------------------------------------
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 AGCTGTGGCGGAGGTTAAGGTGGAAGACGGTACATATGATGAATACAAACCAGATCCAGG 965
consensus_10766#2 ------------------------------------------------------------
consensus_10766#1 ------------------------------------------------------------
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 TAACTGCTGATTCGATACTGTCGACAACTGAGTTCGTAACAATTGATGAGACTGCAGTTG 1025
consensus_10766#2 ------------------------------------------------------------
consensus_10766#1 ------------------------------------------------------------
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 TTGTTGCTGTTGTATTAAAAAGTTATTTAGCGCTAATGCTGCAGCTGCTGAAGACATTGG 1085
consensus_10766#2 ------------------------------------------------------------
consensus_10766#1 ------------------------------------------------------------
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 ATTAGGTGCATCACAACCATTGTTCATGGAATATAATGGTGGATATATGAATTGTGATGG 1145
consensus_10766#2 ------------------------------------------------------------
consensus_10766#1 ------------------------------------------------------------
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 AGTGTAAAGTGATGGAGCAGGTTGTGAAGAAAACGGAAGACCGTAAATACTCATACTTAA 1205
consensus_10766#2 ------------------------------------------------------------
consensus_10766#1 ------------------------------------------------------------
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 CGGATTTAACATATTCGTTACCTCAGGATTAACATGAGATGTTCCTATATCTGTACAAGA 1265
consensus_10766#2 ------------------------------------------------------------
consensus_10766#1 ------------------------------------------------------------
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 ATTTATTGGGGTAAGCCCAGGATTGAAAGACCCACAAGAGAGAAAGGTAGGAAATGAAGT 1325
consensus_10766#2 ------------------------------------------------------------
consensus_10766#1 ------------------------------------------------------------
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 TACAGAATCAGGCATATGACATTTTGTTTCACCATTTTGACAAGACCTTTCCAGTTTTTC 1385
consensus_10766#2 ------------------------------------------------------------
consensus_10766#1 ------------------------------------------------------------
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 GTCACCGTTACATGCGACAGTTGATTCTTTATTCTGACTTGTTCCGTCTAATGAAGATGA 1445
consensus_10766#2 ------------------------------------------------------------
consensus_10766#1 ------------------------------------------------------------
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 GGTAGACAAATTTGCTCGTTTTGTAGGTAACCATTTCTCAGAAGCAACTGAAGAGGATGT 1505
consensus_10766#2 ------------------------------------------------------------
consensus_10766#1 ------------------------------------------------------------
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 ATCATTATTGATTGTTGACTTAGAAATAACCGAATCATGAGGAAACATTGAGCTTGAAGA 1565
consensus_10766#2 ------------------------------------------------------------
consensus_10766#1 ------------------------------------------------------------
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 TAGTGTAGATGATGTTGGCAACACACCAGCAGCTTGATTTGCCTGTTGTAGGACAGCTGC 1625
consensus_10766#2 ------------------------------------------------------------
consensus_10766#1 ------------------------------------------------------------
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 CGCTGCTAATAACGCTGATGCACTTAAAGATGTCGGGTCAGGTGCAGAATTTAGAGGAGT 1685
consensus_10766#2 ------------------------------------------------------------
consensus_10766#1 ------------------------------------------------------------
consensus_10766#3 ------------------------------------------------------------
consensus_10766#0 TAAGTATGTTCTATAAACTGATCCCCTTTCCATCCCTNCAANT 1728
consensus_10766#2 -------------------------------------------
consensus_10766#1 -------------------------------------------
consensus_10766#3 -------------------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||