|
These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10768#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1739 fasta sequence
[AAAGTCTGGAATCTGACGACTGTAACCGTCAAATACAATTCAACAGCAGCCACACACAATTCAGGTAAAATCTCACAGTAAGCATCGACGTGGTAACCATGGATGAAGTTTTTTACACACTTAAAGGTTATCACCGTGTGTTATCTTATCCTG-TTAATTCGA-TCATCACTATTTTTCTCGAGAAAACTTGTGCCGGGATCAGACGCTCCTGAATATGCTTGTTGATCGACTGATTTTGCCAATCGAAAAGCTTGTCAAAGCTCCTCGTTTAGCAGCTCTAAATACTACTCACGAAGAAGTGGAAAAAGCTTTACTTGGCAGTAAGATTGTTTGTGTTGAAGATATGAATGCGGGAATGCGTGGTGTTCGCCGCATTGATGGTTATCCTGGTCTGTCCACGAATCCAGATATTTCAATAAATATGCAACCTGATAATGGATTATCGACTTTTGCATCGTCCCAGAATTTAACCTCATTGATTGGGTCTTTCTCTCTCCAACCACCACATTTGCCTGATCAGCCAATCACTATCAGTCCTCAATCCGTAGCTGTGTTGAGAACTGCTGGTTCAGACAAATTCCGATCTGATGGCGTTATAAGATCTGGACACATGAATCCTGAAACAAGTAAAGAGCTTCTACAAACAAGTACTTTAATTCAAACCCCGGTGACAACAAATGTTTGCATAGCACCTGCGTCTCATCAAATGTCCATTCCATTATTGTTACCTCTATGCGGTATGGAGAACTGCAGCAATATTCATATAGAATGTGCCGGCACGGGGGGTCCTTCAGTAGTACCCTGTCGTAATACTGCTCCTTGGATATTTGAACGGCCTACGAAACAGTATAATCCATATTCTCGTGTTGCACATGTGATAGTTCCTCAGTCTATAAATCAACCAAATTCAACAAATTACAATAAAAATCAACCGTAATAATTCGTCATGCACACCAACCGAACCAACTCGTATTATTCCGAAATCTGACTACGTACGAAACAAGTCTTCAACGCGAATTAAAGAAAAACTTACTGGTACATGAGTCTCCGAAATAATGAAATTCATAATTTTGTATTATCATTTACTGAAACTACAAGTGATCACCCAGTATCGTGCAGTCATTTGTTCCAAGTAATTTCACACTGCTCATTGGATAGACAAGTGAATGAAACTGTGCTTACCAGTTATCTTTTTCACCGTTATAATTAAAGCGACGGAAATAGAAAAAAGAACTATAACTACTGGCCGTTTCATCCTGAATATCTACGAACCACCGTTCCGGTCACAATTATGCTGTTCATCTTCATTACAAATGCTTTATTTTAAGTCGGGAAGTACTGTGATTAGAATCCGCGTTACGGCCACTGATATATGGTGTCTAAACTGCCTTTTATTTTATTTTGAAGATTTCTTAGTTACTGTTTTTATTCCACCCTGTTTGTATAAATGATTTACTGTCAGTACATACGTATCTATATACTACTGCTTTACTTCAAGCTTCCTTAAGTGTAATCATTTCGCGAAGTATATTGCACAACTTACATTTCACCATGCAAAAGAGAAACTAATTATCCTACCTCACCATATATGTATATCCCAGAAAATCTCCAGATAAGCGCCTTAGGTCTAGATTTTCGTAGTTATATGCAAATAGGAGTTTAAAGAATTAGAACTATATCAAAATCAAATTATTTGTNTTTCATTTACTTTCTAATTACAAACAAACAAGCCAAGATTT]
[-] EMBL CD067496 [AAAGTCTGGAATCTGACGACTGTAACCGTCAAATACAATTCAACAGCAGCCACACACAATTCAGGTAAAATCTCACAGTAAGCATCGACGTGGTAACCATGGATGAAGTTTTTTACACACTTAAAGGTTATCACCGTGTGTTATCTTATCCTG TTAATTCGA TCATCACTATTTTTCTCGAGAAAACTTGTGCCGGGATCAGACGCTCCTGAATATGCTTGTTGATCGACTGATTTTGCCAATCGAAAAGCTTGTCAAAGCTCCTCGTTTAGCAGCTCTAAATACTACTCACGAAGAAGTGGAAAAAGCTTTACTTGGCAGTAAGATTGTTTGTGTTGAAGATATGAATGCGGGAATGCGTGGTGTTCGCCGCAT ]
[-] EMBL CD147861 [ ttaTTATCT TGCTGTTTTCTTCAAGTCATCACTATTTTTCTCGAGAAAACTTGTGCCGGGATCAGACGTTCCTGAATATGCTTGTTGATCGACTGATTTTGCCAATCGAAAAGCTTGTCAAAGCTCCTCGTTTAGCAGCTCTAAATACTACTCATGAAGAAGTGGAAAAAGCTTTACTTGGCAGTAAGATTGTTTGTGTTGAAGATATGAATGCGGGAATGCGTGGTGTTCGCCGCATTGATGGTTATCCTGGTCTGTCCACGAATCCAGATATTTCAATAAATATGCAACCTGATAATGGATTATCGACTTTTGCATCGTCCCAGAATTTAACCTCATTGATTGGGTCTTTCTCTCTCCAACCACCACATTTGCCTGATCAGCCAATCACTATCAGTCCTCAATCCGTAGCTGTGTTGAGAACTGCTGGTTCAGACAAATT ]
[+] EMBL CD111130 [ TGTTTGTGTTGAAGATATGAATGCGGGAATGCGTGGTGTTCGCCGCATTGATGGTTATCCTGGTCTGTCCACGAATCCAGATATTTCAATAAATATGCAACCTGATAATGGATTATCGACTTTTGCATCGTCCCAGAATTTAACCTCATTGATTGGGTCTTTCTCTCTCCAACCACCACGTTTGCCTGATCAGCCAATTACTATCAGTCCTCAATCCGTAGCTGTGTTGAGAACTGCTGGTTCAGACAAATTCCGATCTGATGGCGTTATAAGATCTGGACACATGAATCCTGAAACAAGTAAAGAGCTTCTACAAACAAGTACTTTAATTCAAACCCCGGTGACAACAAATGTTTGCATAGCACCTGCGTCTCATCAAATGTCCATTCC ]
[-] EMBL CD169696 [ CAGACAAATTCCGATCTGATGGCGTTATAAGATCTGGACACATGAATCCTGAAACAAGTAAAGAGCTTCTACAAACAAGTACTTTAATTCAAACCCCGGTGACAACAAATGTTTGCATAGCACCTGCGTCTCATCAAATGTCCATTCCATTATTGTTACCTCTATGCGGTATGGAGAACTGCAGCAATATTCATATAGAATGTGCCGGCACGGGGGGTCCTTCAGTAGTACCCTGTCGTAATACTGCTCCTTGGATATTTGAACGGCCTACGAAACAGTATAATCCATATTCTCGTGTTGCACATGTGATAGTTCCTCAGTCTATAAATCAACCAAATTCAACAAATTACAATAAAAATCAACCGTAATAATTCGTCATGCACACCAACCGAACCAACTCGTATTATTCCGAAATCTGACTACGTACGAAACAAGTCTTCAACGCGAATTAAAGAAAAACTTACTGGTACATGAGTCTCCGAAATAATGAAATTCATAATTTTGTATTATCATTTACTGAAACTACAAGTGATCACCCAGTATCGTGCAGTCATTTGTTCCAAGTAATTTCACACTGCTCATTGGATAGACAAGTGAATGAAACTGTGCT ]
[+] EMBL AW017339 [ ATAATGAAATTCATAATTTTGTATTATCATTTACTGAAACTACAAGTGATCACCCAGTATCGTGCAGTCATTTGTTCCAAGTAATTTCACACTGCTCATTGGATAGACAAGTGAATGAAACTGTGCTTACCAGTTATCTTTTTCACCGTTATAATTAAAGCGACGGAAATAGAAAAAAGAACTATAACTACTGGCCGTTTCATCCTGAATATCTACGAACCACCGTTCCGGTCACAATTATGCTGTTCATCTTCATTACAAATGCTTTATTTTAAGTCGGGAAGTACTGTGATTAGAATCCGCGTTACGGCCACTGATATATGGTGTCTAAACTGCCTTTTATTTTATTTTGAAGATTTCTTAGTTACTGTTTTTATTCCACCCTGTTTGTATAAATGATTTACTGTCAGTACATACGTATCTATATACTACTGCTTTACTTCAAGCTTCCTTAAGTGTAATCATTTCGCGAAGTATATTGCACAACTTACATTTCACCATGCAAAAGAGAAACTAATTATCCTACCTCACCATATATGTATATCCCAGAAAATCTCCAGATAAGCGCCTTAGGTCTAGATTTTCGTAGTTATATGCAAATAGGAGTTTAAAGAATTAGAACTATATCAAAATCAAATTATTTGTNTTTCATTTACTTTCTAATTACAAACAAACAAGCCAAGATTT]
[+] EMBL CD080660 [ CACACTGCTCATTGGATATACAAGTGAATGAAACTGTGCTTACCAAGTATCTTTTTCACCGTTATAATTAAAGCGACGGAAATACAAAAAAGAAC ]
consensusID : consensus_10768#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1039 fasta sequence
[ATGTCCATTCCATTATTGTTACCTCTATGCGGTATGGAGAACTGCAGCAATATTCATATAGAATGTGCCGGCACGGGGGGTCCTTCAGTAGTACCCTGTCGTAATACTGCTCCTTGGATATTTGAACGGCCTACGAAACAGTATAATCCATATTCTCGTGTTGCACATGTGATAGTTCCTCAGTCTATAAATCAACCAAATTCAACAAATTACAATAAAAATCAACCGTTCGGGTGGGACTGTCATCAGCGCCCGCATCTCCCAGCTGCGAACAGTACACATTCAAGTGTAGTACCAATACGGCGTCAAACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTCATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGCTGTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAACCACTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACATTAGTCCCATTGGAGCCAACCAACAACGACCGTCGAATGCACTTTTGAATCACCTCCAAGCAGTAGCTGCCATGTCAGCTGTTGCACAACAGTCGAATGCTACACCTTATTTTCAGAATCCTGTATCTCAAACTAATCCTTTTCATATCCCCACCCCTGTACCATTGCCAGTGTACTACACCGCTTCACAGTTATCGTTACAATCTTCTGGCGCGCAGAACCCTTTACAACGTCTACAACAGAATGTGTATCCGATGCAAAGCTATGGATATCAAACAGTCCAAAATGCCCCAGTCTCTGAGTCATCGGACAATGTAAGCTCAGATAGTAGATGTGGCTTAATGGTGCCGAACCCTCCACAACATACAAACAACTTGATCTATCCTATACTGTTGCAACCACCCGTGCATATACAACATTAGTTACCCACACATATGAATGGTACAGGGTGGCAGGGTCACAACCCTGGTCAGTCAATACGTGGAACACTCAATTCATTAAGTT]
[+] EMBL CD094701 [ATGTCCATTCCATTATTGTTACCTCTATGCGGTATGGAGAACTGCAGCAATATTCATATAGAATGTGCCGGCACGGGGGGTCCTTCAGTAGTACCCTGTCGTAATACTGCTCCTTGGATATTTGAACGGCCTACGAAACAGTATAATCCATATTCTCGTGTTGCACATGTGATAGTTCCTCAGTCTATAAATCAACCAAATTCAACAAATTACAATAAAAATCAACCGTTCGGGTGGGACTGTCATCAGCGCCCGCATCTCCCAGCTGCAAACAGTACACATTCAAGTGTAGTACCAATACGGCGTCAAACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTTATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGCTGTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAACCACTATGGAAATCAACCGCAGTATTTCCCCAACCAGTCGTTAACCAATTCTTC AACATTAGT ]
[+] EMBL BG931273 [ TCCTTCAGTAGTACCCTGTCGTAATACTGCTCCTTGGATATTTGAACGGCCTACGAAACAGTATAATCCATATTCTCGTGTTGCACATGTGATAGTTCCTCAGTCTATAAATCAACCAAATTCAACAAATTACAATAAAAATCAACCGTTCGGGTGGGACTGTCATCAGCGCCCGCATCTCCCAGCTGCGAACAGTACACATTCAAGTGTAGTACCAATACGGCGTCAAACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTCATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGCTGTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAACCACTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACATTAGTCCCATTGGAcc ]
[-] EMBL CD094532 [ TATTCTCGTGTGNCACATGTGATAGTTCCTCGGTCTATAAATCAACCAAATTCAACAAATTACAATAANAATCAACCGTTCGGGTGGGACTGTCATCAGCGCCCGCATCTCCCAGCTGCGAACAGTACACATTCAAGTGTAGTACCAATACGGCGTCAAACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTCATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGCTGTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAACCACTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACATTAGTCCCATTGGAGCCAACCAACAACGACCGTCGAATGCACTTTTGAATCACCTCCAAGCAGTAGCTGCCATGTCAGCTGTTGCACAACAGTCGAATGCTACACCTTATTTTCAGAATCCTGTATCTCAAACTAATCCTTTTCATATCCCCACCCCTGTACCATTGCCAGTGTACTACACCGCTTCACAGTTATCGTTACAAT ]
[+] EMBL CD179429 [ TAGTTCCTCAGTCTATAAATCAACCAAATTCAACAAATTACAATAAAAATCAACCGTTCGGGTGGGACTGTCATCAGCGCCCGCATCTCCCAGCTGCGAACAGTACACATTCAAGTGTAGTACCAATACGGCGTCAAACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTCATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGCTGTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAACCACTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACATTAGTC ]
[+] EMBL CD179428 [ TAGTTCCTCAGTCTATAAATCAACCAAATTCAACAAATTACAATAAAAATCAACCGTTCGGGTGGGACTGTCATCAGCGCCCGCATCTCCCAGCTGCGAACAGTACACATTCAAGTGTAGTACCAATACGGCGTCAAACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTCATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGCTGTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAACCACTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACATTAGTC ]
[+] EMBL CD064604 [ TCCTCAGTCTATAAATCAACCAAATTCAACAAATTACAATAAAAATCAACCGTTCGGGTGGGACTGTCATCAGCGCCCGCATCTCCCAGCTGCGAACAGTACACATTCAAGTGTAGTACCAATACGGCGTCAAACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTCATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGCTGTAGCAGCTGCTTTAGCATCAATGAGTACAAGCACCAGTAATAATATTCATTCAAACCACTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACATTAGTCCCATTGGAGCCAACCAACAACGACCGTCGAAT ]
[-] EMBL CD114233 [ AACATTAGTCCCATTGGAGCCAACCAACAACGACCGTCGAATGCACTTTTGAATCACCTCCAAGCAGTAGCTGCCATGTCAGCTGTTGCACAACAGTCGAATGCTACACCTTATTTGCAGAATCCTGTATCTCAAACTAATCCTTTTCATATCCCCACCCCTGTACCATTGCCAGTGTACTACACCGCTTCACAGTTATCGTTACAATCTTCTGGCGCGCAGAACCCTTTACAACGTCTACAACAGAATGTGTATCCGATGCAAAGCTATGGATATCAAACAGTCCAAAATGCCCCAGTCTCTGAGTCATCGGACAATGTAAGCTCAGATAGTAGATGTGGCTTAATGGTGCCGAACCCTCCACAACATACAAACAACTTGATCTATCCTATACTGTTGCAACCACCCGTGCATATACAACATTAGTTACCCACACATATGAATGGTACAGGGTGGCAGGGTCACAACCCTGGTCAGTCAATACGTGGAACACTCAATTCATTAAGTT]
[-] EMBL CD199196 [ TTCACAGTTATCGTTACAATCTTCTGGCGCGCAGAACCCTTTACAACGTCTACAACAGAATGTGTATCCGATGCAAAGCTATGGATATCAAACAGTCCAAAATGCCCCAGTCTCTGAGTCATCGGACAATCTAAGCTCAGATAGTAGATGTGGCTTAATGGTGCCGAACCCTCCACAACATACAAACAACTTGATCTATCCTATACTGTTGCAACCACC ]
consensusID : consensus_10768#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 582 fasta sequence
[AACACAACAGCAGATAATATGGTAACTGATGCTACAATAAATGTATCTCTTGCATCTGAAAATCAATCGGATAGTGGATCGTCTTTGTTACCGGGGCTAATTTCATCAACTGGAAATTCTACATGCGCAGCTATTGACGACAATCAGTCTCATAAGCTTTCCAAACAAGTTGAAAAAATTACCTCTCCTGGTTCAGTTCATGATTCTGAGGATTCAGTTAGTTCTGGGATAGGAGACATGACTACCACTAGCGCCGGTGATAATGACAGTCGTAATAATTCGTCATGCACACCAACCGAACCAACTCGTATTATTCCGAAATCTGACTACGTACGAAACAAGTCTTCAACGCGAATTAAAGAAAAACTTACTGGTACATGAGTCTCCGAAATAATGAAATTCATAATTTTGTATTATCATTTACTGAAACTACAAGTGATCACCCAGTATCGTGCAGTCATTTGTTCCAAGTAATTTCACACTGCTCATTGGATAGACAAGTGAATGAAGCTGTGCTTACCAGTTATATTTTTCACCGTTATAATTAAAGCGACGGAAAGAGAAAAAAGAAAGATAACTACG]
[+] EMBL CD114789 [AACACAACAGCAGATAATATGGTAACTGATGCTACAATAAATGTATCTCTTGCATCTGAAAATCAATCGGATAGTGGATCGTCTTTGTTACCGGGGCTAATTTCATCAACTGGAAATTCTACATGCGCAGCTATTGACGACAATCAGTCTCATAAGCTTTCCAAACAAGTTGAAAAAATTACCTCTCCTGGTTCAGTTCATGATTCTGAGGATTCAGTCAGTTCTGGGATAGGAGACATGACTACCACTAGCGCCGGTGATAATGACAGTCGTA ]
[+] EMBL CD114745 [AACACAACAGCAGATAATATGGTAACTGATGCTACAATAAATGTATCTCTTGCATCTGAAAATCAATCGGATAGTGGATCGTCTTTGTTACCGGGGCTAATTTCATCAACTGGAAATTCTACATGCGCAGCTATTGACGACAATCAGTCTCATAAGCTTTCCAAACAAGTTGAAAAAATTACCTCTCCTGGTTCAGTTCATGATTCTGAGGATTCAGTTAGTTCTGGGATAGGAGACATGACTACCACTAGCGCCGGTGATAATGACAGTCGTA ]
[-] EMBL CD074578 [ CAGATAATATGGTAACTGATGCTACAATAAATGTATCTCTTGCATCTGAAAATCAATCGGATAGTGGATCGTCTTTGTTACCGGGGCTAATTTCATCAACTGGAAATTCTACATGCGCAGCTATTGACGACAATCAGTCTCATAAGCTTTCCAAACAAGTTGAAAAAATTACCTCTCCTGGTTCAGTTCATGATTCTGAGGATTCAGTTAGTTCTTGGATAGGAGACATGACCACCACTAGCGCCGGTGATAATGACAGTCGTAATAATTCGTCATGCACACCAACCGAACCAACTCGTATTATTCCGAAATCTGACTACGTACGAAACAAGTCTTCAACGCGAATTAAAGAAAAACTTACTGGTACATGAGTCTCCGAAATAATGAAATTCATAATTTTGTATTATCATTTACTGAAACTACAAGTGATCACCCAGTATCGTGCAGTCATTTGTTCCAAGTAATTTCACACTGCTCATTGGATAGACAAGTGAATGAAGCTGTGCTTACCAGTTATATTTTTCACCGTTATAATTAAAGCGACGGAAAGAGAAAAAAGAAAGATAACTACG]
consensusID : consensus_10768#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 479 fasta sequence
[TGTAGACATAGTAGGTCATGTGATAGTTCCTTAGTCTATAAATCAACCAAATTCAACAAATTACAATAAAAATCAACCGTTCGGGTGGGACTGTCATCAGCGCCCGCATCTCCCAGCTGCGAACAGTACACATTCAAGTGTAGTACCAATACGGCGTCAAACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTCATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGCTGTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAACCACTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACATTAGTCCCATTGGAGCCAACCAACAACGACCGTCGAATGCACTTTTGAATCACCTCCAAGCAGTAGCTGCCATGTCAGCTGTTGCACAACAGT]
[+] EMBL CD128030 [TGTAGACATAGTAGGTCATGTGATAGTTCCTTAGTCTATAAATCAACCAAATTCAACAAATTACAATAAAAATCAACCGTTCGGGTGGGACTGTCATCAGCGCCCGCATCTCCCAGCTGCGAACAGTACACATTCAAGTGTAGTACCAATACGGCGTCAAACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTCATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGCTGTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAACCACTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACATTAGTCCCATTGGAGCCAACCAACAACGACCGTCGAATGCACTTTTGAATCACCTCCAAGCAGTAGCTGCCATGTCAGCTGTTGCACAACAGT]
[+] EMBL CD069005 [ CATTCAAGTGTAGTACCAATACGGCGTCAAACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTCATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGCTGTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAACCACTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACATTAGTCC ]
consensusID : consensus_10768#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 319 fasta sequence
[GTGGTTGCAACAGTATAGGATAGATCAAGTTGTTTGTATGTTGTGGAGGGTTCGGCACCATTAAGCCACATCTACTATCTGAGCTTAGATTGTCCGATGACTCATATACTGGGGCATTTTGGACTGTTTGATATCCATAGCTTTGCATCGGATACACATTCTGTTGTAGACGTTGTAAAGGGTTCTGCGCGCCAGAAGATTGTAACGATAACTGTGAAGCGGTGTACTGTTCGCAGCTGGGAGATGCGGGCGCTGATGACAGTCCCACCCGAACGGTTGATTTTTATTGTAATTTGTTGAATTTGGTTGATTTATAGAC]
[+] EMBL CD114358 [GTGGTTGCAACAGTATAGGATAGATCAAGTTGTTTGTATGTTGTGGAGGGTTCGGCACCATTAAGCCACATCTACTATCTGAGCTTAGATTGTCCGATGACTCATATACTGGGGCATTTTGGACTGTTTGATATCCATAGCTTTGCATCGGATACACATTCTGTTGTAGACGTTGTAAAGGGTTCTGCGCGCCAGAAGATTGTAACGATAACTGTGAAGCGGTGTACTGTTCGCAGCTGGGAGATGCGGGCGCTGATGACAGTCCCACCCGAACGGTTGATTTTTATTGTAATTTGTTGAATTTGGTTGATTTATAGAC]
[-] EMBL CD114586 [ TGGTTGCAACAGTATAGGATAGATCAAGTTGTTTGTATGTTGTGGAGGGTTCGGCACCATTAAGCCACATCTACTATCTGAGCTTAGATTGTCCGATGACTCAGAGACTGGGGCATTTTGGACTGTTTGATATCCATAGCTTTGCATCGGATACACATTCTGTTGTAGACGTTGTAAAGGGTTCTGCGCGCCAGAAGATTGTAACGATAACTGTGAAGCGGTGTACTGTTCGCAGCTGGGAGATGCGGGCGCTGATGACAGTCCCACCCGAACGGTTGATTTTTATTGTAATTTGTTGAATTTGGTTGATTTATAGA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10768#0 AAAGTCTGGAATCTGACGACTGTAACCGTCAAATACAATTCAACAGCAGCCACACACAAT 60
consensus_10768#2 ------------------------------------------------------------
consensus_10768#1 ------------------------------------------------------------
consensus_10768#3 ------------------------------------------------------------
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 TCAGGTAAAATCTCACAGTAAGCATCGACGTGGTAACCATGGATGAAGTTTTTTACACAC 120
consensus_10768#2 ------------------------------------------------------------
consensus_10768#1 ------------------------------------------------------------
consensus_10768#3 ------------------------------------------------------------
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 TTAAAGGTTATCACCGTGTGTTATCTTATCCTGTTAATTCGATCATCACTATTTTTCTCG 180
consensus_10768#2 ------------------------------------------------------------
consensus_10768#1 ------------------------------------------------------------
consensus_10768#3 ------------------------------------------------------------
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 AGAAAACTTGTGCCGGGATCAGACGCTCCTGAATATGCTTGTTGATCGACTGATTTTGCC 240
consensus_10768#2 ------------------------------------------------------------
consensus_10768#1 ------------------------------------------------------------
consensus_10768#3 ------------------------------------------------------------
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 AATCGAAAAGCTTGTCAAAGCTCCTCGTTTAGCAGCTCTAAATACTACTCACGAAGAAGT 300
consensus_10768#2 ------------------------------------------------------------
consensus_10768#1 ------------------------------------------------------------
consensus_10768#3 ------------------------------------------------------------
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 GGAAAAAGCTTTACTTGGCAGTAAGATTGTTTGTGTTGAAGATATGAATGCGGGAATGCG 360
consensus_10768#2 ------------------------------------------------------------
consensus_10768#1 ------------------------------------------------------------
consensus_10768#3 ------------------------------------------------------------
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 TGGTGTTCGCCGCATTGATGGTTATCCTGGTCTGTCCACGAATCCAGATATTTCAATAAA 420
consensus_10768#2 ------------------------------------------------------------
consensus_10768#1 ------------------------------------------------------------
consensus_10768#3 ------------------------------------------------------------
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 TATGCAACCTGATAATGGATTATCGACTTTTGCATCGTCCCAGAATTTAACCTCATTGAT 480
consensus_10768#2 ------------------------------------------------------------
consensus_10768#1 ------------------------------------------------------------
consensus_10768#3 ------------------------------------------------------------
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 TGGGTCTTTCTCTCTCCAACCACCACATTTGCCTGATCAGCCAATCACTATCAGTCCTCA 540
consensus_10768#2 ------------------------------------------------------------
consensus_10768#1 ------------------------------------------------------------
consensus_10768#3 ------------------------------------------------------------
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 ATCCGTAGCTGTGTTGAGAACTGCTGGTTCAGACAAATTCCGATCTGATGGCGTTATAAG 600
consensus_10768#2 ------------------------------------------------------------
consensus_10768#1 ------------------------------------------------------------
consensus_10768#3 ------------------------------------------------------------
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 ATCTGGACACATGAATCCTGAAACAAGTAAAGAGCTTCTACAAACAAGTACTTTAATTCA 660
consensus_10768#2 ---------------------------------AACACAACAG-CAGATAATATGGT--- 23
consensus_10768#1 ------------------------------------------------------------
consensus_10768#3 ------------------------------------------------------------
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 AACCCCGGTGACAACAAATGTTTGCATAGCACCTGCGTCTCA-TCAAATGTCCATTCCAT 719
consensus_10768#2 AACTGATGCTACAATAAATGTATCTCTTGCATCTGAAAATCAATCGGATAGTGGATC-GT 82
consensus_10768#1 -----------------------------------------------ATGTCCATTCCAT 13
consensus_10768#3 ------------------------------------------------------------
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 TATTGTTACCTCTATGCGGTATGGAGAACTGCAGCAATATTCATATAGAATGTGCCGGCA 779
consensus_10768#2 CTTTGTTACC----------GGGGCTAATTTCATCAAC-----TGGAAATTCTACATGCG 127
consensus_10768#1 TATTGTTACCTCTATGCGGTATGGAGAACTGCAGCAATATTCATATAGAATGTGCCGGCA 73
consensus_10768#3 ------------------------------------------------------------
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 CGGGGGGTCCTTCAGTAGTACCCTGTCGTAATACTGCTCCTTGGATATTTGAACGGCCTA 839
consensus_10768#2 CAG-----CTATTGACGACAATCAGTC-TCATAAGCTTTCCAAACAAGTTGAAAAAATTA 181
consensus_10768#1 CGGGGGGTCCTTCAGTAGTACCCTGTCGTAATACTGCTCCTTGGATATTTGAACGGCCTA 133
consensus_10768#3 ------------------------------------------------------------
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 CGAAACAGTATAATCCATATTCTCGT-GTTGCACATGTGATAGTTCCTCAGTCTATAAAT 898
consensus_10768#2 CCTCTC---CTGGTTCAGTTCATGAT-TCTGAGGATTCAGTTAGTTCTGGG---ATAGGA 234
consensus_10768#1 CGAAACAGTATAATCCATATTCTCGT-GTTGCACATGTGATAGTTCCTCAGTCTATAAAT 192
consensus_10768#3 -----------------TGTAGACATAGTAGGTCATGTGATAGTTCCTTAGTCTATAAAT 43
consensus_10768#4 ---------GTGGTT-GCAACAGTAT-AGGATAGATCAAGTTGTTTGTATGT-TGTGGAG 48
* ** * * * * *
consensus_10768#0 CAACCAAATTCAACAAATTACAATAAAAAT--CAACCGTAATAATTCGTCATGCACACCA 956
consensus_10768#2 GACATGACTACCACTAGCGCCGGTGATAATGACAGTCGTAATAATTCGTCATGCACACCA 294
consensus_10768#1 CAACCAAATTCAACAAATTACAATAAAAAT--CAACCGTTCGGGTGGGAC-TGT-CATCA 248
consensus_10768#3 CAACCAAATTCAACAAATTACAATAAAAAT--CAACCGTTCGGGTGGGAC-TGT-CATCA 99
consensus_10768#4 GGTTCGGCACCATTAAGCCACATCTACTATCTGAGCTTAGATTGTCCGAT-GACTCATAT 107
* * * * ** * * * **
consensus_10768#0 ACCGAACCAACTCGTATTATTCCGAAATCTGA---CTACGTACGAAACAAGTCTTCAACG 1013
consensus_10768#2 ACCGAACCAACTCGTATTATTCCGAAATCTGA---CTACGTACGAAACAAGTCTTCAACG 351
consensus_10768#1 GCGCCCGCATCTCCCA--GCTGCGAA--CAGT---ACACATTCAAGTGTAGTAC-CAATA 300
consensus_10768#3 GCGCCCGCATCTCCCA--GCTGCGAA--CAGT---ACACATTCAAGTGTAGTAC-CAATA 151
consensus_10768#4 ACTGGGGCATTTTGGACTGTTTGATATCCATAGCTTTGCATCGGATACACATTCTGTTGT 167
* ** * * * * * * * * *
consensus_10768#0 CGAATTAAAGAAAAACTTACTGGTACATGAGTCTC-CGAAATAATGAAATTCATAATTTT 1072
consensus_10768#2 CGAATTAAAGAAAAACTTACTGGTACATGAGTCTC-CGAAATAATGAAATTCATAATTTT 410
consensus_10768#1 CGGCGTCAA-ACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTC 359
consensus_10768#3 CGGCGTCAA-ACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTC 210
consensus_10768#4 AGACGTTGTAAAGGGTTCTGCGCGCCAGAAGATT---GTAACGATAACTGTGA-AGCGGT 223
* * * * * * * * * * * *
consensus_10768#0 GTATTAT---CATTTACTGAAACTACAAGTGAT---CACCCAGTA-TCGTGCAGTC-ATT 1124
consensus_10768#2 GTATTAT---CATTTACTGAAACTACAAGTGAT---CACCCAGTA-TCGTGCAGTC-ATT 462
consensus_10768#1 ATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGC 419
consensus_10768#3 ATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGC 270
consensus_10768#4 GTACTGTTCGCAGCTGGGAGATGCGGGCGCTGATGACAGTC-CCACCCGAACGGTTGATT 282
** * * * * ** * * * * * *
consensus_10768#0 T--GTTCCAAGTAATTTCACACTGCTCATTGGATAGACAAGTGAATGAAACTGTGCTTAC 1182
consensus_10768#2 T--GTTCCAAGTAATTTCACACTGCTCATTGGATAGACAAGTGAATGAAGCTGTGCTTAC 520
consensus_10768#1 T--GTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAAC 477
consensus_10768#3 T--GTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAAC 328
consensus_10768#4 TTTATTGTAATTTGTTGAATTTGGTTGATT-TATAGAC---------------------- 319
* * * * ** * * * * * **
consensus_10768#0 CAGTTATCTTTTTCACCGTTATAATTAAAGCGACGGAAATAGAAAAAAGAACTATAACTA 1242
consensus_10768#2 CAGTTATATTTTTCACCGTTATAATTAAAGCGACGGAAAGAGAAAAAAGAAAGATAACTA 580
consensus_10768#1 CA-CTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACAT 536
consensus_10768#3 CA-CTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACAT 387
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 CTGGCCGTTTCATCCTGAATATCTACGAACCACCGTTCCGGTCACAATTATGCTGTTCAT 1302
consensus_10768#2 CG---------------------------------------------------------- 582
consensus_10768#1 TAGTCCCATTGGAGCCAACCAACAACGACCGTCGAATGCACTTTTGAATCACCTCCAAGC 596
consensus_10768#3 TAGTCCCATTGGAGCCAACCAACAACGACCGTCGAATGCACTTTTGAATCACCTCCAAGC 447
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 CTTCATTACAAATGCTTTATTTTAAGTCGGGAAGTACTGTGATTAGAATCCGCGTTACGG 1362
consensus_10768#2 ------------------------------------------------------------
consensus_10768#1 AGTAGCTGCCATGTCAGCTGTTGCACAACAGTCGAATGCTACACCTTATTTTCAGAATCC 656
consensus_10768#3 AGTAGCTGCCATGTCAGCTGTTGCACAACAGT---------------------------- 479
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 CCACTGATATATGGTGTCTAAACTGCCTTTTATTTTATTTTGAAGATTTCTTAGTTACTG 1422
consensus_10768#2 ------------------------------------------------------------
consensus_10768#1 TGTATCTCAAACTAATCCTTTTCATATCCCCACCCCTGTACCATTGCCAGTGTACTACAC 716
consensus_10768#3 ------------------------------------------------------------
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 TTTTTATTCCACCCTGTTTGTATAAATGATTTACTGTCAGTACATACGTATCTATATACT 1482
consensus_10768#2 ------------------------------------------------------------
consensus_10768#1 CGCTTCACAGTTATCGTTACAATCTTCTGGCGCGCAGAACCCTTTACAACGTCTACAACA 776
consensus_10768#3 ------------------------------------------------------------
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 ACTGCTTTACTTCAAGCTTCCTTAAGTGTAATCATTTCGCGAAGTATATTGCACAACTTA 1542
consensus_10768#2 ------------------------------------------------------------
consensus_10768#1 GAATGTGTATCCGATGCAAAGCTATGGATATCAAACAGTCCAAAATGCCCCAGTCTCTGA 836
consensus_10768#3 ------------------------------------------------------------
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 CATTTCACCATGCAAAAGAGAAACTAATTATCCTACCTCACCATATATGTATATCCCAGA 1602
consensus_10768#2 ------------------------------------------------------------
consensus_10768#1 GTCATCGGACAATGTAAGCTCAGATAGTAGATGTGGCTTAATGGTGCCGAACCCTCCACA 896
consensus_10768#3 ------------------------------------------------------------
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 AAATCTCCAGATAAGCGCCTTAGGTCTAGATTTTCGTAGTTATATGCAAATAGGAGTTTA 1662
consensus_10768#2 ------------------------------------------------------------
consensus_10768#1 ACATACAAACAACTTGATCTATCCTATACTGTTGCAACCACCCGTGCATATACAACATTA 956
consensus_10768#3 ------------------------------------------------------------
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 AAGAATTAGAACTATATCAAAATCAAATTATTTGTNTTTCATTTACTTTCTAATTACAAA 1722
consensus_10768#2 ------------------------------------------------------------
consensus_10768#1 GTTACCCACACATATGAATGGTACAGGGTGGCAGGGTCACAACCCTGGTCAGTCAATACG 1016
consensus_10768#3 ------------------------------------------------------------
consensus_10768#4 ------------------------------------------------------------
consensus_10768#0 CAAACAAGCCAAGATTT------ 1739
consensus_10768#2 -----------------------
consensus_10768#1 TGGAACACTCAATTCATTAAGTT 1039
consensus_10768#3 -----------------------
consensus_10768#4 -----------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||