cluster # 10781

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Schistosoma mansoni
cluster # 10781 cluster # 10781 Sequences # 22 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10781#0 length = 1315 sequences # 17
consensus_10781#1 length = 460 sequences # 1

consensus_10781#2 length = 393 sequences # 1
consensus_10781#3 length = 389 sequences # 1
consensus_10781#4 length = 309 sequences # 2

consensusID : consensus_10781#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 1315
fasta sequence

                              [ATACTNGGGAACCAGTTGCATCTACATTACGTCGTGACGCAGTAACTAGCCAATTGAAGGAACATGATATTGATGCTGTCATCCGTGATCTATTGGATGGTAATCAGTCAGATGAAGATGAAGAAGATTCTGAAGAAGAGTTACAAGATTTAGATACAAAAACTGATGACACAAAAGAAATAAATGGCGATCGTGAATCTAGCTCAGAAGTAGATAGGAATAAATCAGAGTCTGATATTCATTCAGTTGGTTCTGCTTCCACTACTGAAACACCAATACGCCATAATGAGAATGGTTATAGTTCGACAAACACAAAATCTGTAGCCAAAGTAATTGATACCAAAATTCCTAAAGACAAAGTCATCAAAAGTAAAAGGTCAGGACACAAAGACAAATATACGGATCCCATTTCTCAGTTGGATCGAGTCCAGGCACTGCGTGACGCTATTTTAGACTAT-CTTGCAGCAGAAGAGGCGAGTCCTACGGCAGTTTATGCTCGTAAATTTTACCTGGCTCAGTGGCTTAATGATTGTACAAAGGAAACAGAACGTGCTCAACGAAGTGCAGTACA-GAAGAAAAACCAGAATGCTGTTTTAAATGGCAATGGTGAAACTGTATGTGCTACCAAAGGTT-TTTCTGAGGCAGATCAGGCGCTAATCCTAGCGGTAGCGGAAAGAAGAAGACAGCACATTTTGTCGAAAGTACG-TGAAGCTCCACAGTCTTGGCGACAACGTAGATGTTTATGGAGCAATTCATTGCCTTCTAATGAGAAAACAAAACAGTCTGCAAACATCTGTATTTCTGATTCAAATCAGGAAACGACGCTCATTTTCCAGGGTACTTTAGACTATGAAGATTGCTGCTTAGTTTGTCGTTATCTAGCCAGTCTCCGACCATTTTCTCAAAGTTTTGACGTTTATTTATCCCAAATATGTAGATTATTGAGTGAATCGTCGGTTGCTGTGCGTACTAAAGCGTTAAGATGTTTATCAGCAGTGGTGGAGGCTGACCCAAATGTTCTAGCTCGCGTAGATATTGAGCGGGCTGTACATTCTCGTCTTCTAGATACATCGACTTCAGTTCGTGAAGCTGCTGTAGATCTACTTGGTCGATTTTTAAGTTGCAGACCAGAGCTGACTGCACAGTATTATCCAATGTTGGCCGAACGAATACGAGATAAGGGAGTAAGTGTCCGCAAACGCGTTATTCGGATCCTTCGTGACATTTGTCTTGAGCAACCAGACTTTCCAAGAGTTGCTGAAATTTGTGTAAAAATGATTAGACGTGTTAACGATGAAGAAGGAATCAAGAAACT]

[-] EMBL CD139931             [ATACTNGGGAACCAGTTGCATCTACATTACGTCGTGACGCAGTAACTAGCCAATTGAAGGAACATGATATTGATGCTGTCATCCGTGATCTATTGGATGGTAATCAGTCAGATGAAGATGAAGAAGATTCTGAAGAAGAGTTACAAGATTTAGATACAAAAACTGATGACACAAAAGAAATAAATGGCGATCGTGAATCTAGCTCAGAAGTAGATAGGAATAAATCAGAGTCTGATATTCATTCAGTTGGTTCTGCTTCCACTACTGAAACACCAATACGCCATAATGAGAATGGTTATAGTTCGACAAACACAAAATCTGTAGCCAAAGTAATTGATACCAAAATTCCTAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD139429             [                 GCATCTACATTACGTCGTGACGCAGTAACTAGCCAATTGAAGGAACATGATATTGATGCTGTCATCCGTGATCTATTGGATGGTAATCAGTCAGATGAAGATGAAGAAGATTCTGAAGAAGAGTTACAAGATTTAGATACAAAAACTGATGACACAAAAGAAATAAATGGCGATCGTGAATCTAGCTCAGAAGTAGATAGGAATAAATCAGAGTCTGATATTCATTCAGTTGGTTCTGCTTCCACTATTGAAACACCAATACGCCATAATGAGAATGGTTATAGTTCGACAAACACAAAATCTGTAGCCAAAGTAATTGATACCAAAATTCCTAAAGACAAAGTCATCAAAAGTAAAAGGTCAGGACACAAAGACAAATATACGGATCCCATTTCTCAGTTGGATCGAGTCCAGGCGCTGCGTGACGCTATTTTAGACTAT CTTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD183865             [                                                             ACATGATATTGATGCTGTCATCCGTGATCTATTGGATGGTAATCAGTCAGATGAAGATGAAGAAGATTCTGAAGAAGAGTTACAAGATTTAGATACAAAAACTGATGACACAAAAGAAATAAATGGCGATCGTGAATCTAGCTCAGAAGTAGATAGGAATAAATCAGAGTCTGATATTCATTCAGTTGGTTCTGCTTCCACTACTGAAACACCAATACGCCATAATGAGAATGGTTATAGTTCGACAAACACAAAATCTGTAGCCAAAGTAATTGATACCAAAATTCCTAAAGACAAAGTCATCAAAAGTAAAAGGTCAGGACACAAAGACAAATATACGGATCCCATTTCTCAGTTGGATCGAGTCCAGGCACTGCGTGACGCTATTTTAGACTAT CTTGCAGCAGAAGAGGCGAGTCCTACGGCAGTTTATGCTCGTAAATTTTACCTGGCTCAGTGGCTTAATGATTGTACAAAGGAAACAGAACGTGCTCAACGAAGTGCAGTACA GAAGAAAAACCAGAATGCTGTTTTAAATGGGCATGGTGAAACTGTATGTGCTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD170576             [                                                                                     TGATCTATTGGATGGTAATCAGTCAGATGAAGATGAAGAAGATTCTGAAGAAGAGTTACAAGATTTAGATACAAAAACTGATGACACAAAAGAAATAAATGGCGATCGTGAATCTAGCTCAGAAGTAGATAGGAACAAATCAGAGTCTGATATTCATTCAGTTGGTTCTGCTTCCACTACTGAAACACCAATACGCCATAATGAGAATGGTTATAGTTCGACAAACACTAAATCTGTAGCCAAAGTAATTGATACCAAAATTCCTAAAGACAAAGTCATCAAAAGTAAAAGGTCAGGACACAAAGACAAATATACGGATCCCATTTCTCAGTTGGATCGAGTCCAGGCACTGCGTGACGCTATTTTAGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD170492             [                                                                                     TGATCTATTGGATGGTAATCAGTCAGATGAAGATGAAGAAGATTCTGAAGAAGAGTTACAAGATTTAGATACAAAAACTGATGACACAAAAGAAATAAATGGCGATCGTGAATCTAGCTCAGAAGTAGATAGGAATAAATCAGAGTCTGATATTCATTCAGTTGGTTCTGCTTCCACTACTGAAACACCAATACGCCATAATGAGAATGGTTATAGTTCGACAAACACAAAATCTGTAGCCAAAGTAATTGATACCAAAATTCCTAAAGACAAAGTCATCAAAAGTAAAAGGTCAGGACACAAAGACAAATATACGGATCCCATTTCTCAGTTGGATCGAGTCCAGGCACTGCGTGACGCTATTTTAGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD170574             [                                                                                     TGATCTATTGGATGGTAATCAGTCAGATGAAGATGAAGAAGATTCTGAAGAAGAGTTACAAGATTTAGATACAAAAACTGATGACACAAAAGAAATAAATGGCGATCGTGAATCTAGCTCAGAAGTAGATAGGAATAAATCAGAGTCTGATATTCATTCAGTTGGTTCTGCTTCCACTACTGAAACACCAATACGCCATAATGAGAATGGTTATAGTTCGACAAACACAAAATCTGTAGCCAAAGTAATTGATACCAAAATTCCTAAAGACAAAGTCATCAAAAGTAAAAGGTCAGGACACAAAGACAAATATACGGATCCCATTTCTCAGTTGGATCGAGTCCAGGCACTGCGTGACGCTATTTTAGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD170580             [                                                                                     TGATCTATTGGATGGTAATCAGTCAGATGAAGATGAAGAAGATTCTGAAGAAGAGTTACAAGATTTAGATACAAAAACTGATGACACAAAAGAAATAAATGGCGATCGTGAATCTAGCTCAGAAGTAGATAGGAATAAATCAGAGTCTGATATTCATTCAGTTGGTTCTGCTTCCACTACTGAAACACCAATACGCCATAATGAGAATGGTTATAGTTCGACAAACACAAAATCTGTAGCCAAAGTAATTGATACCAAAATTCCTAAAGACAAAGTCATCAAAAGTAAAAGGTCAGGACACAAAGACAAATATACGGATCCCATTTCTCAGTTGGATCGAGTCCAGGCACTGCGTGACGCTATTTTAGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD170559             [                                                                                      GATCTATTGGATGGTAATCAGTCAGATGAAGATGAAGAAGATTCTGAAGAAGAGTTACAAGATTTAGATACAAAAACTGATGACACAAAAGAAATAAATGGCGATCGTGAATCTAGCTCAGAAGTAGATAGGAATAAATCAGAGTCTGATATTCATTCAGTTGGTTCTGCTTCCACTACTGAAACACCAATACGCCATAATGAGAATGGTTATAGTTCGACAAACACAAAATCTGTAGCCAAAGTAATTGATACCAAAATTCCTAAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD068208             [                                                                                                                                                                                                                    GATAGGAATAAATCAGAGTCTGATATTCATTCAGTTGGTTCTGCTTCCACTACTGAAACACCAATACGCCATAATGAGAATGGTTATAGTTCGACAAACACAAAATCTGTAGCCAAAGTAATTGATACCCAAATTCCTAAAGACAAAGTCATCAAAAGTAAAAGGTCAGGACACAAAGACAAATATACGGATCCCATTTCTCAGTTGGATCGAGTCCAGGCACTGCGTGACGCTATTTTAGACTATGCTTGCAGCAGAAGAGGC AGTCCTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD115788             [                                                                                                                                                                                                                                                                     CTACTGAAACACCAATACGCCATAATGAGAATGGTTATAGTTCGACAAACACAAAATCTGTAGCCAAAGTAATTGATACCAAAATTCCTAAAGACAAAGTCATCAAAAGTAAAAGGTCAGGACACAAAGACAAATATACGGATCCCATTTCTCAGTTGGATCGAGTCCAGGCACTGCGTGACGCTATTTTAGACTAT CTTGCAGCACAAGAGGCGAGTCCTACGGCAGTTTATGCTCGTAAATTTTACCTGGCTCAGTGGCTTACTGATTGTTCAAAGGAAACAGAACGTGCTCAACGATGTGCAGCTCA GAAGAAAAACCAGAATGCTGCTTTAAATGGCACTGGTGAAACTGTTTGTGCTACCCAATGTTCCCTCTGAGGCAGATTATGCGCTATTCCTATCGGCTGCTGGAAGATGATTACTGCACATTTTGTCGAAAGT CGTTGATGCTCCCCAGgc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD098085             [                                                                                                                                                                                                                                                                                                                                                                                                     GACAAATATACGGATCCCATTTCTCAGTTGGATCGAGTCCAGGCACTGCGTGACGCTATTTTAGACTAT CTTGCAGCAGAAGAGGCGAGTCCTACGGCAGTTTATGCTCGTAAATTTTACCTGGCTCAGTGGCTTAATGATTGTACGAAGGAAACAGAACGTGCTCAACGAAGTGCAGTACA GAAGAAAAACCAGAATGCTGTTTTAAATGGCAATGGTGAAACTGTATGTGCTACCAAAGGTT TTTCTGAGGCAGATCAGGCGCTAATCCTAGCGGTAGCGGAAAGAAGAAGACAGCACATTTTGTCGAAAGTACG TGAAGCTCCACAGTCTTGGCGACAACGTAGATGTTTATGGAGCAATTCATTGCCTTCTAATGAGAAAACAAAACAGTCTGCAAACATCTGTATTTCTGATTCAAATCAGGAAACGACGCTGATTTTCCAGGGTACTTTAGACTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD098047             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AATGATTGTACAAAGGAAACAGAACGTGCTCAACGAAGTGCAGTACA GAAGAAAAACCAGAATGCTGTTTTAAATGGCAATGGTGAAACTGTATGTGCTACCAAAGGTT TTTCTGAGGCAGATCAGGCGCTAATCCTAGCGGTAGCGGAAAGAAGAAGACAGCACATTTTGTCGAAAGTACG TGAAGCTCCACAGTCTTGGCGACAACGTAGATGTTTATGGAGCAATTCATTGCCTTCTAATGAGAAAACAAAACAGTCTGCAAACATCTGTATTTCTGATTCAAATCAGGAAACGACGCTCATTTTCCAGGGTACTTTAGACTATGAAGATTGCTGCTTAGTTTGTCGTTATCTAGCCAGTCTCCGACCATCTTCTCAAAGTTTTGACGTTTATTTATCCCAAATATGTAGATTATTGAGTGAATCGTCGGTTGCTGTGCGTACTAAAGCGTTAAGAT                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD097932             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GAACGTGCTCAACGAAGTGCAGTACA GAAGAAAAACCAGAATGCTGTTTTAAATGGCAATGGTGAAACTGTATGTGCTACCAAAGGTT TTTCTGAGGCAGATCAGGCGCTAATCCTAGCGGTAGCGGAAAGAAGAAGACAGCACATTTTGTCGAAAGTACG TGAAGCTCCACAGTCTTGGCGACAACGTAGATGTTTATGGAGCAATTCATTGCCTTCTAATGAGAAAACAAAACAGTCTGCAAACATCTGTATTTCTGATTCAAATCAGGAAACGACGCTCATTTTCCAGGGTACTTTAGACTATGAAGATTGCTGCTTAGTTTGTCGTTATCTAGCCAGTCTCCGACCATTTTCTCAAAGTTTTGACGTTTATTTATCCCAAATATGTAGATTATTGAGTGAATCGTCGGTTGCTGTGCGTACTAAAGCGTTAAGAT                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD098005             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AACGTGCTCAACGAAGTGCAGTACATGAAGAAAAACCAGAATGCTGTTTTAAATGGCAATGGTGAAACTGTATGTGCTACCAAAGGTT TTTCTGAGGCAGATCAGGCGCTAATCCTAGCGGTAGCGGAAAGAAGAAGACAGCACATTTTGTCGAAAGTACG TGAAGCTCCACAGTCTTGGCGACAACGTAGATGTATATGGAGCAATTCATTGCCTTCTAATGAGAAAACAAAACAGTCTGCAAACATCTGTATTTCTGATTCAAATCAGGAAACGACGCTCATTTTCCAGGGTACTTTAGACTATGAAGATTGCTGCTTAGTTTGTCGTTATCTAGCCAGTCTCCGACCATTTTCTCAAAGTTTTGACGTTTATTTATCCCAAATATGTAGATTATTGAGTGAATCGTCGGTTGCTGTGCGTACTAAAGCGTTAAGA                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD098158             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCAGAATGCTGTTTTAAATGGCAATGGTGAAACTGTATGTGCTACCAAAGGTT TTTCTGAGGCAGATCAGGCGCTAATCCTAGCGGTAGCGGAAAGAAGAAGACAGCACATTTTGTCGAAAGTACG TGAAGCTCCACAGTCTTGGCGACAACGTAGATGTTTATGGAGCAATTCATTGCCTTCTAATGAGAAAACAAAACAGTCTGCAAACATCTGTATTTCTGATTCAAATCAGGAAACGACGCTCATTTTCCAGGGTACTTTAGACTATGAAGATTGCTGCTTAGTTTGTCGTTATCTAGCCAGTCTCCGACCATTTTCTCAAAGTTTTGACGTTTATTTATCCCAAATACGTAGATTATTGAGTGAATCGTCGGTTGCTGTGCGTACTAAAGCGTTAAGAT                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD147373             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 agTTCTGATTCAAATCAGGAAACGACGCTCATTTTCCAGGGTACTTTAGACTATGAAGATTGCTGCTTAGTTTGTCGTTATCTAGCCAGTCTCCGACCATTTTCTCAAAGTTTTGACGTTTATTTATCCCAAATATGTAGATTATTGAGTGAATCGTCGGTTGCTGTGCGTACTAAAGCGTTAAGATGTTTATCAGCAGTGGTGGAGGCTGACCCAAATGTTCTAGCTCGCGTAGATATTGAGCGGGCTGTACATTCTCGTCTTCTAGATACATCGACTTCAGTTCGTGAAGCTGCTGTAGATCTACTTGGTCGATTTTTAAGTTGCAGACCAGAGCTGACTGCACAGTATT                                                                                                                                                                      ]
[+] EMBL CD171396             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTGAGTGAATCGTCGGTTGCTGTGCGTACTAAAGCGTTAAGATGTTTATCAGCAGTGGTGGAGGCTGACCCAAATGTTTTAGCTCGCGTAGATATTGAGCGGGCTGTACATTCTCGTCTTCTAGATACATCGACTTCAGTTCGTGAAGCTGCTGTAGATCTACTAGGTCGATTTTTAAGTTGCAGACCAGAGCTGACTGCACAGTATTATCCAATGTTGGCCGAACGAATACGAGATAAGGGAGTAAGTGTCCGCAAACGCGTTATTCGGATCCTTCGTGACATTTGTCTTGAGCAACCAGACTTTCCAAGAGTTGCTGAAATTTGTGTAAAAATGATTAGACGTGTTAACGATGAAGAAGGAATCAAGAAACT]




>consensus_10781#0
ATACTNGGGAACCAGTTGCATCTACATTACGTCGTGACGCAGTAACTAGCCAATTGAAGG
AACATGATATTGATGCTGTCATCCGTGATCTATTGGATGGTAATCAGTCAGATGAAGATG
AAGAAGATTCTGAAGAAGAGTTACAAGATTTAGATACAAAAACTGATGACACAAAAGAAA
TAAATGGCGATCGTGAATCTAGCTCAGAAGTAGATAGGAATAAATCAGAGTCTGATATTC
ATTCAGTTGGTTCTGCTTCCACTACTGAAACACCAATACGCCATAATGAGAATGGTTATA
GTTCGACAAACACAAAATCTGTAGCCAAAGTAATTGATACCAAAATTCCTAAAGACAAAG
TCATCAAAAGTAAAAGGTCAGGACACAAAGACAAATATACGGATCCCATTTCTCAGTTGG
ATCGAGTCCAGGCACTGCGTGACGCTATTTTAGACTATCTTGCAGCAGAAGAGGCGAGTC
CTACGGCAGTTTATGCTCGTAAATTTTACCTGGCTCAGTGGCTTAATGATTGTACAAAGG
AAACAGAACGTGCTCAACGAAGTGCAGTACAGAAGAAAAACCAGAATGCTGTTTTAAATG
GCAATGGTGAAACTGTATGTGCTACCAAAGGTTTTTCTGAGGCAGATCAGGCGCTAATCC
TAGCGGTAGCGGAAAGAAGAAGACAGCACATTTTGTCGAAAGTACGTGAAGCTCCACAGT
CTTGGCGACAACGTAGATGTTTATGGAGCAATTCATTGCCTTCTAATGAGAAAACAAAAC
AGTCTGCAAACATCTGTATTTCTGATTCAAATCAGGAAACGACGCTCATTTTCCAGGGTA
CTTTAGACTATGAAGATTGCTGCTTAGTTTGTCGTTATCTAGCCAGTCTCCGACCATTTT
CTCAAAGTTTTGACGTTTATTTATCCCAAATATGTAGATTATTGAGTGAATCGTCGGTTG
CTGTGCGTACTAAAGCGTTAAGATGTTTATCAGCAGTGGTGGAGGCTGACCCAAATGTTC
TAGCTCGCGTAGATATTGAGCGGGCTGTACATTCTCGTCTTCTAGATACATCGACTTCAG
TTCGTGAAGCTGCTGTAGATCTACTTGGTCGATTTTTAAGTTGCAGACCAGAGCTGACTG
CACAGTATTATCCAATGTTGGCCGAACGAATACGAGATAAGGGAGTAAGTGTCCGCAAAC
GCGTTATTCGGATCCTTCGTGACATTTGTCTTGAGCAACCAGACTTTCCAAGAGTTGCTG
AAATTTGTGTAAAAATGATTAGACGTGTTAACGATGAAGAAGGAATCAAGAAACT

consensusID : consensus_10781#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 460
fasta sequence

                              [CTACTGAAACACCAATACGCACTAATGAGAATGGTTATAGTTCGACAAACACAAAATCTGTAGCCAAAGTAATTGATACCAAAATTCCTAAAGACAAAGTCATCAAATGTTAAAGGTCAGGACACAAAGACAAATATACGGATCCCATTTCTCAGTTGGATCGAGTCCAGGCNCTGCGTGACGCTNTTTTAGACTATCTTGCNGCCGAAGAGGCGAGTCCTACGGCAGTTTATGCTCGTAAATTTTACCTGGCTCAGTGGCTTACTGATTGTCCAAAGGAAACAGACCGTGCTCTACGAAGTGCAGTTCGGATGATTTACCGGAATGCTGTTTTAAATGGCAATGGTGAAACTGTGTGTGCTNCCATTGGTTTTTCTGAGGCCGATCATGCGCTTTTCCTAGCGGTAGCGGTGTGATGATGACCGCCCATTTTGTCGAAGGTTCGTGCAGCTCCCCCCCC]

[+] EMBL CD115751             [CTACTGAAACACCAATACGCACTAATGAGAATGGTTATAGTTCGACAAACACAAAATCTGTAGCCAAAGTAATTGATACCAAAATTCCTAAAGACAAAGTCATCAAATGTTAAAGGTCAGGACACAAAGACAAATATACGGATCCCATTTCTCAGTTGGATCGAGTCCAGGCNCTGCGTGACGCTNTTTTAGACTATCTTGCNGCCGAAGAGGCGAGTCCTACGGCAGTTTATGCTCGTAAATTTTACCTGGCTCAGTGGCTTACTGATTGTCCAAAGGAAACAGACCGTGCTCTACGAAGTGCAGTTCGGATGATTTACCGGAATGCTGTTTTAAATGGCAATGGTGAAACTGTGTGTGCTNCCATTGGTTTTTCTGAGGCCGATCATGCGCTTTTCCTAGCGGTAGCGGTGTGATGATGACCGCCCATTTTGTCGAAGGTTCGTGCAGCTCCCCCCCC]




>consensus_10781#1
CTACTGAAACACCAATACGCACTAATGAGAATGGTTATAGTTCGACAAACACAAAATCTG
TAGCCAAAGTAATTGATACCAAAATTCCTAAAGACAAAGTCATCAAATGTTAAAGGTCAG
GACACAAAGACAAATATACGGATCCCATTTCTCAGTTGGATCGAGTCCAGGCNCTGCGTG
ACGCTNTTTTAGACTATCTTGCNGCCGAAGAGGCGAGTCCTACGGCAGTTTATGCTCGTA
AATTTTACCTGGCTCAGTGGCTTACTGATTGTCCAAAGGAAACAGACCGTGCTCTACGAA
GTGCAGTTCGGATGATTTACCGGAATGCTGTTTTAAATGGCAATGGTGAAACTGTGTGTG
CTNCCATTGGTTTTTCTGAGGCCGATCATGCGCTTTTCCTAGCGGTAGCGGTGTGATGAT
GACCGCCCATTTTGTCGAAGGTTCGTGCAGCTCCCCCCCC

consensusID : consensus_10781#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 393
fasta sequence

                              [GTTGACCCATGTGCACCCTTTTCATTCACGTCTCAGTCGAGCGAAGTTGCCTCAGGACTTGAATTGTTAATTAATGCTGAAAGAAATAACTTTACGCGCCAGCAATTGCTTTCTTCTAGTGAAGCAACGAAAACCGATGATCTACCCAACAAAGGAATACAAAGATCCATGAGCATCGATGATGGATATAGGCATCATCACTCGAGCTTCAATATACAACCATCTTATCGTAGCGCATCAGAATCTGTTACAGTTCCTTCTATGCGTCACCACAATGTTATATCCACATTAAATGTTGAGTTATCTTCGTCACATGTTCCTACTTCGGATACTTTGGAACCTGATACTACTAAGTATACTCATACAGAATACAACCATACTCAATACACCACT]

[+] EMBL CD069192             [GTTGACCCATGTGCACCCTTTTCATTCACGTCTCAGTCGAGCGAAGTTGCCTCAGGACTTGAATTGTTAATTAATGCTGAAAGAAATAACTTTACGCGCCAGCAATTGCTTTCTTCTAGTGAAGCAACGAAAACCGATGATCTACCCAACAAAGGAATACAAAGATCCATGAGCATCGATGATGGATATAGGCATCATCACTCGAGCTTCAATATACAACCATCTTATCGTAGCGCATCAGAATCTGTTACAGTTCCTTCTATGCGTCACCACAATGTTATATCCACATTAAATGTTGAGTTATCTTCGTCACATGTTCCTACTTCGGATACTTTGGAACCTGATACTACTAAGTATACTCATACAGAATACAACCATACTCAATACACCACT]




>consensus_10781#2
GTTGACCCATGTGCACCCTTTTCATTCACGTCTCAGTCGAGCGAAGTTGCCTCAGGACTT
GAATTGTTAATTAATGCTGAAAGAAATAACTTTACGCGCCAGCAATTGCTTTCTTCTAGT
GAAGCAACGAAAACCGATGATCTACCCAACAAAGGAATACAAAGATCCATGAGCATCGAT
GATGGATATAGGCATCATCACTCGAGCTTCAATATACAACCATCTTATCGTAGCGCATCA
GAATCTGTTACAGTTCCTTCTATGCGTCACCACAATGTTATATCCACATTAAATGTTGAG
TTATCTTCGTCACATGTTCCTACTTCGGATACTTTGGAACCTGATACTACTAAGTATACT
CATACAGAATACAACCATACTCAATACACCACT

consensusID : consensus_10781#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 389
fasta sequence

                              [TTAATGCTGAAAGAAATAACTTTACGCGCCAGCAATTGCTTTCTTCTAGTTGAAGCAACGAAAACCGATGATCTACCCTACAAAGGAATACAAAGATCCATGAGCATCGATGATGGATATAGGCATCATCACTCGAGCTTCAATATACAACCATCTTATCGTAGCGCATCAGAATCTGTTACAGTTCCTTCTATGCGTCACCACAATGTTATATCCACATTAAATGTTGAGTTATCTTCGTCACATGTTCCTACTTCGGATACTTTGGAACCTGATACTGCTAAGTATACTCATGCAGAGTCAAACATAGAAGTTGCATCTACATTACGTTCGTGACGCAGTAACTAGCCCATTGAAGGAACATGATATTGATGCTGTCATCCGTGATC]

[+] EMBL CD139353             [TTAATGCTGAAAGAAATAACTTTACGCGCCAGCAATTGCTTTCTTCTAGTTGAAGCAACGAAAACCGATGATCTACCCTACAAAGGAATACAAAGATCCATGAGCATCGATGATGGATATAGGCATCATCACTCGAGCTTCAATATACAACCATCTTATCGTAGCGCATCAGAATCTGTTACAGTTCCTTCTATGCGTCACCACAATGTTATATCCACATTAAATGTTGAGTTATCTTCGTCACATGTTCCTACTTCGGATACTTTGGAACCTGATACTGCTAAGTATACTCATGCAGAGTCAAACATAGAAGTTGCATCTACATTACGTTCGTGACGCAGTAACTAGCCCATTGAAGGAACATGATATTGATGCTGTCATCCGTGATC]




>consensus_10781#3
TTAATGCTGAAAGAAATAACTTTACGCGCCAGCAATTGCTTTCTTCTAGTTGAAGCAACG
AAAACCGATGATCTACCCTACAAAGGAATACAAAGATCCATGAGCATCGATGATGGATAT
AGGCATCATCACTCGAGCTTCAATATACAACCATCTTATCGTAGCGCATCAGAATCTGTT
ACAGTTCCTTCTATGCGTCACCACAATGTTATATCCACATTAAATGTTGAGTTATCTTCG
TCACATGTTCCTACTTCGGATACTTTGGAACCTGATACTGCTAAGTATACTCATGCAGAG
TCAAACATAGAAGTTGCATCTACATTACGTTCGTGACGCAGTAACTAGCCCATTGAAGGA
ACATGATATTGATGCTGTCATCCGTGATC

consensusID : consensus_10781#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 309
fasta sequence

                              [TGGGCAGCTGAAGAGTAAATAAAGAAGGATCATGTATTGAAGGTGTGACTGTGGTGGGAGATGCAACTTCTATGTTTGACTCTGCATGAGTATACTTAGTAGTATCAGGTTCCAAAGTATCCGAAGTAGGAACATGTGACGAAGATAACTCAACATTTAATGTGGATATAACATTGTGGTGACGCATAGAAGGAACTGTAACAGATTCTGATGCGCTACGATAAGATGGTTGTATATTGAAGCTCGAGTGATGATGCCTATATCCATCATCGATGCTCATGGATCTTCGTATTCCTTCGTTGGGTAGAT]

[-] EMBL CD197309             [TGGGCAGCTGAAGAGTAAATAAAGAAGGATCATGTATTGAAGGTGTGACTGTGGTGGGAGATGCAACTTCTATGTTTGACTCTGCATGAGTATACTTAGTAGTATCAGGTTCCAAAGTATCCGAAGTAGGAACATGTGACGAAGATAACTCAACATTTAATGTGGATATAACATTGTGGTGACGCATAGAAGGAACTGTAACAGATTCTGATGCGCTACGATAAGATGGTTGTATATTGAA                                                                    ]
[+] EMBL CD069214             [                                                                                               TTAGTAGTATCAGGTTCCAAAGTATCCGAAGTAGGAACATGTGACGAAGATAACTCAACATTTAATGTGGATATAACATTGTGGTGACGCATAGAAGGAACTGTAACAGATTCTGATGCGCTACGATAAGATGGTTGTATATTGAAGCTCGAGTGATGATGCCTATATCCATCATCGATGCTCATGGATCTTCGTATTCCTTCGTTGGGTAGAT]




>consensus_10781#4
TGGGCAGCTGAAGAGTAAATAAAGAAGGATCATGTATTGAAGGTGTGACTGTGGTGGGAG
ATGCAACTTCTATGTTTGACTCTGCATGAGTATACTTAGTAGTATCAGGTTCCAAAGTAT
CCGAAGTAGGAACATGTGACGAAGATAACTCAACATTTAATGTGGATATAACATTGTGGT
GACGCATAGAAGGAACTGTAACAGATTCTGATGCGCTACGATAAGATGGTTGTATATTGA
AGCTCGAGTGATGATGCCTATATCCATCATCGATGCTCATGGATCTTCGTATTCCTTCGT
TGGGTAGAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10781#2      ------------------------------------------------------------
consensus_10781#3      ------------------------------------------------------------
consensus_10781#0      ATACTNGGGAACCAGTTGCATCTACATTACGTCGTGACGCAGTAACTAGCCAATTGAAGG 60
consensus_10781#1      ------------------------------------------------------------
consensus_10781#4      ------------------------------------------------------------
                                                                                   

consensus_10781#2      ------------------------------------------------------------
consensus_10781#3      ------------------------------------------------------------
consensus_10781#0      AACATGATATTGATGCTGTCATCCGTGATCTATTGGATGGTAATCAGTCAGATGAAGATG 120
consensus_10781#1      ------------------------------------------------------------
consensus_10781#4      ------------------------------------------------------------
                                                                                   

consensus_10781#2      ------------------------------------------------------------
consensus_10781#3      ------------------------------------------------------------
consensus_10781#0      AAGAAGATTCTGAAGAAGAGTTACAAGATTTAGATACAAAAACTGATGACACAAAAGAAA 180
consensus_10781#1      ------------------------------------------------------------
consensus_10781#4      ------------------------------------------------------------
                                                                                   

consensus_10781#2      --------------------------GTTGACCCATGTGCACCCTTTTCATTCACGTCTC 34
consensus_10781#3      ------------------------------------------------------------
consensus_10781#0      TAAATGGCGATCGTGAATCTAGCTCAGAAGTAGATAGGAATAAATCAGAGTCTGATATTC 240
consensus_10781#1      ------------------------------------------------------------
consensus_10781#4      ------------------------------------------------------------
                                                                                   

consensus_10781#2      AGTCGAGCGAAGTTGCCTCAGGACTTGAATTGTTAATTAATGCTGAAAGAAATAACTTTA 94
consensus_10781#3      ------------------------------------TTAATGCTGAAAGAAATAACTTTA 24
consensus_10781#0      ATTCAGTTGGTTCTGCTTCCACTACTGAAACACCAATACGCCATAATGAGAATGGTTATA 300
consensus_10781#1      ---------------------CTACTGAAACACCAATACGCACTAATGAGAATGGTTATA 39
consensus_10781#4      ----------------------------TGGGCAGCTGAAGAGTAAATAAAGAAGGATCA 32
                                                           *      * *    *        *

consensus_10781#2      CGCGCCAGCAATTGCTTTCTTCTAGT-GAAGCAACGAAAACCGATGATCT------ACCC 147
consensus_10781#3      CGCGCCAGCAATTGCTTTCTTCTAGTTGAAGCAACGAAAACCGATGATCT------ACCC 78
consensus_10781#0      -GTTCGACAAACACAAAATCTGTAGCCAAAGTAATTGATACCAAAATTCC------TAAA 353
consensus_10781#1      -GTTCGACAAACACAAAATCTGTAGCCAAAGTAATTGATACCAAAATTCC------TAAA 92
consensus_10781#4      TGTATTGAAGGTGTGACTGTGGTGGGAGATGCAACTTCTATGTTTGACTCTGCATGAGTA 92
                        *                    * *   * * **     *                    

consensus_10781#2      AACAAAGGAATACAAAGATCCATGAGCAT----CGATGATGGATATAGGCATCATCACTC 203
consensus_10781#3      TACAAAGGAATACAAAGATCCATGAGCAT----CGATGATGGATATAGGCATCATCACTC 134
consensus_10781#0      GACAAAGTCAT-CAAAAGTAAAAGGTCAGGACACAAAGACAAATATACGGATCCCATTTC 412
consensus_10781#1      GACAAAGTCAT-CAAATGTTAAAGGTCAGGACACAAAGACAAATATACGGATCCCATTTC 151
consensus_10781#4      TACTTAGTAGTATCAGGTTCCA-AAGTATCCGAAGTAGGAACATGTGACGAAGATAACTC 151
                        **  **   *   *   *  *     *         *    ** *    *       **

consensus_10781#2      GAGCTTCAAT---ATACAACCATCTTATCGTAGCGCATCAGAATCTGTTACAGTTCCTTC 260
consensus_10781#3      GAGCTTCAAT---ATACAACCATCTTATCGTAGCGCATCAGAATCTGTTACAGTTCCTTC 191
consensus_10781#0      TCAGTTGGATCGAGTCCAGGCACTGCGTGACGCTATTTTAGACTATCTTGCAGCAGAAGA 472
consensus_10781#1      TCAGTTGGATCGAGTCCAGGCNCTGCGTGACGCTNTTTTAGACTATCTTGCNGCCGAAGA 211
consensus_10781#4      AACATTTAATGTGGATATAACATTGTGGTGACGCATAGAAGGAACTGTAACAGATTCTGA 211
                           **  **          *                  **    * *  * *       

consensus_10781#2      TATGCGTCACCACAATGTTATATCCACATTAAATGTTGAGTTATCTTCGTCACATGTTCC 320
consensus_10781#3      TATGCGTCACCACAATGTTATATCCACATTAAATGTTGAGTTATCTTCGTCACATGTTCC 251
consensus_10781#0      GGCGAGTC-CTACGGCAGTTTATGCTCGT-AAAT-TTTACCTGGCTCAGTGGCTTAATGA 529
consensus_10781#1      GGCGAGTC-CTACGGCAGTTTATGCTCGT-AAAT-TTTACCTGGCTCAGTGGCTTACTGA 268
consensus_10781#4      TGCGCTACGATAAGATGGT---TGTATATTGAAGCTCGAGTGAT----GATGCCTATATC 264
                          *   *   *      *   *     *  **  *  *         *   * *     

consensus_10781#2      TACTTCGGATACTT-TGGAACCTGATACTACTAAGTATACT-CATACAGAATACAACCAT 378
consensus_10781#3      TACTTCGGATACTT-TGGAACCTGATACTGCTAAGTATACT-CATGCAGAGT-CAAACAT 308
consensus_10781#0      TTGTACAAAGGAAA-CAGAACGTGCT-CAACGAAGTGCAGTACAGAAGAAAAACCAGAAT 587
consensus_10781#1      TTGTCCAAAGGAAA-CAGACCGTGCT-CTACGAAGTGCAGTTCGGATGATTTACCGGAAT 326
consensus_10781#4      CATCATCGATGCTCATGGATCTTCGTATTCCTTCGTTGGGTAGAT--------------- 309
                               *        ** * *  *    *   **    *                   

consensus_10781#2      ACTCAAT---ACACCACT------------------------------------------ 393
consensus_10781#3      AGAAGTT---GCATCTACATTACGTTCGTG-ACGCAGTAACTAGCCCATTGAAGGAACAT 364
consensus_10781#0      GCTGTTTTAAATGGCAATGGTGAAACTGTATGTGCTACCAAAGGTTTTTCTGAGGCAGAT 647
consensus_10781#1      GCTGTTTTAAATGGCAATGGTGAAACTGTGTGTGCTNCCATTGGTTTTTCTGAGGCCGAT 386
consensus_10781#4      ------------------------------------------------------------
                                                                                   

consensus_10781#2      ------------------------------------------------------------
consensus_10781#3      GATATTGATGCTGTCATCCGTGATC----------------------------------- 389
consensus_10781#0      CAGGC-GCTAATCCTAGCGGTAGCGGAAAGAAGAAGACAGCACATTTTGTCGAAAGTACG 706
consensus_10781#1      CATGC-GCTTTTCCTAGCGGTAGCGGTGTGATGATGACCGCCCATTTTGTCGAAGGTTCG 445
consensus_10781#4      ------------------------------------------------------------
                                                                                   

consensus_10781#2      ------------------------------------------------------------
consensus_10781#3      ------------------------------------------------------------
consensus_10781#0      TGAAGCTCCACAGTCTTGGCGACAACGTAGATGTTTATGGAGCAATTCATTGCCTTCTAA 766
consensus_10781#1      TGCAGCTCCCCCCCC--------------------------------------------- 460
consensus_10781#4      ------------------------------------------------------------
                                                                                   

consensus_10781#2      ------------------------------------------------------------
consensus_10781#3      ------------------------------------------------------------
consensus_10781#0      TGAGAAAACAAAACAGTCTGCAAACATCTGTATTTCTGATTCAAATCAGGAAACGACGCT 826
consensus_10781#1      ------------------------------------------------------------
consensus_10781#4      ------------------------------------------------------------
                                                                                   

consensus_10781#2      ------------------------------------------------------------
consensus_10781#3      ------------------------------------------------------------
consensus_10781#0      CATTTTCCAGGGTACTTTAGACTATGAAGATTGCTGCTTAGTTTGTCGTTATCTAGCCAG 886
consensus_10781#1      ------------------------------------------------------------
consensus_10781#4      ------------------------------------------------------------
                                                                                   

consensus_10781#2      ------------------------------------------------------------
consensus_10781#3      ------------------------------------------------------------
consensus_10781#0      TCTCCGACCATTTTCTCAAAGTTTTGACGTTTATTTATCCCAAATATGTAGATTATTGAG 946
consensus_10781#1      ------------------------------------------------------------
consensus_10781#4      ------------------------------------------------------------
                                                                                   

consensus_10781#2      ------------------------------------------------------------
consensus_10781#3      ------------------------------------------------------------
consensus_10781#0      TGAATCGTCGGTTGCTGTGCGTACTAAAGCGTTAAGATGTTTATCAGCAGTGGTGGAGGC 1006
consensus_10781#1      ------------------------------------------------------------
consensus_10781#4      ------------------------------------------------------------
                                                                                   

consensus_10781#2      ------------------------------------------------------------
consensus_10781#3      ------------------------------------------------------------
consensus_10781#0      TGACCCAAATGTTCTAGCTCGCGTAGATATTGAGCGGGCTGTACATTCTCGTCTTCTAGA 1066
consensus_10781#1      ------------------------------------------------------------
consensus_10781#4      ------------------------------------------------------------
                                                                                   

consensus_10781#2      ------------------------------------------------------------
consensus_10781#3      ------------------------------------------------------------
consensus_10781#0      TACATCGACTTCAGTTCGTGAAGCTGCTGTAGATCTACTTGGTCGATTTTTAAGTTGCAG 1126
consensus_10781#1      ------------------------------------------------------------
consensus_10781#4      ------------------------------------------------------------
                                                                                   

consensus_10781#2      ------------------------------------------------------------
consensus_10781#3      ------------------------------------------------------------
consensus_10781#0      ACCAGAGCTGACTGCACAGTATTATCCAATGTTGGCCGAACGAATACGAGATAAGGGAGT 1186
consensus_10781#1      ------------------------------------------------------------
consensus_10781#4      ------------------------------------------------------------
                                                                                   

consensus_10781#2      ------------------------------------------------------------
consensus_10781#3      ------------------------------------------------------------
consensus_10781#0      AAGTGTCCGCAAACGCGTTATTCGGATCCTTCGTGACATTTGTCTTGAGCAACCAGACTT 1246
consensus_10781#1      ------------------------------------------------------------
consensus_10781#4      ------------------------------------------------------------
                                                                                   

consensus_10781#2      ------------------------------------------------------------
consensus_10781#3      ------------------------------------------------------------
consensus_10781#0      TCCAAGAGTTGCTGAAATTTGTGTAAAAATGATTAGACGTGTTAACGATGAAGAAGGAAT 1306
consensus_10781#1      ------------------------------------------------------------
consensus_10781#4      ------------------------------------------------------------
                                                                                   

consensus_10781#2      ---------
consensus_10781#3      ---------
consensus_10781#0      CAAGAAACT 1315
consensus_10781#1      ---------
consensus_10781#4      ---------