cluster # 10813

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 10813 cluster # 10813 Sequences # 22 consensus # 7

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10813#0 length = 873 sequences # 7
consensus_10813#1 length = 633 sequences # 8
consensus_10813#2 length = 466 sequences # 1

consensus_10813#3 length = 441 sequences # 2
consensus_10813#4 length = 351 sequences # 2
consensus_10813#5 length = 308 sequences # 1
consensus_10813#6 length = 147 sequences # 1

consensusID : consensus_10813#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 873
fasta sequence

                              [TGTCGTGTTACGCTTAATCAAAGCCGTCATCACCACCTCCAGCCGTTTCAAGACCCAATGATAGTGGAGCTACGAGGAATTAAGTTCATAAATCAATTTTAGCGATAACCGGTGTAATATTGACTCATTGCTGGCGGAGCGGCAGCAGTTGGGACCCCACCTGGAGGAGCACCGCCAACTGGGATAGTACCATACCCAGATGGATAAGTAGAATACCCAGGGTAATAGCTTGCATAAGGATTTGCGGCTGGTGTCTGTGGTGTTACTGTTGCGGTTGGAGCACTTGGGACGCTGCTGGATACACTACCAGACACAGCCGAAGGTTGCTGCTGTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCATCGTACTTCCCAGCTCCTTGAGTACTTCCAGTAGCACTTTGGGGAGCACCATAGTAATAGGAGGCATAAGCTGCTGCAGCCGGCGTCGAATGGTCAGATGTGGCAGTAGTGGTGGTGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATTGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAAGAGCGAAGACGGTGGTGTTGATTTGGCGATTGATAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGCAGTGTACTGACTATACGGGAGTATAGTTNTTGTGGCGGCGGCTGTTGCCGCGACAAAAGTGGTTGGTT]

[-] EMBL CD112225             [TGTCGTGTTACGCTTAATCAAAGCCGTCATCACCACCTCCAGCCGTTTCAAGACCCAATGATAGTGGAGCTACGAGGAATTAAGTTCATAAATCAATTTTAGCGATAACCGGTGTAATATTGACTCATTGCTGGCGGAGCGGCAGCAGTTGGGACCCCACCTGGAGGAGCACCGCCAACTGGGATAGTACCATACCCAGATGGATAAGTAGAATACCCAGGGTAATAGCTTGCATAAGGATTTGCGGCTGGTGTCTGTGGTGTTACTGTTGCGGTTGGAGCACTTGGGACGCTGCTGGATACACTACCAGACACAGCCGAAGGTTGCTGCTGTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCATCGTACTTCCCAGCTCCTTGAGTACTTCCAGTAGCACTTTGGGGAGCACCATAGTAATAGGAGGCATAAGCTGCTGCAcaaca                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL AW016970             [                                                                          AGGAATTAAGTTCATAAATCAATTTTAGCGATAACCGGTGTAATATTGACTCATTGCTGGCGGAGCGGCAGCAGTTGGGACCCCACCTGGAGGAGCACCGCCAACTGGGATAGTACCATACCCAGATGGATAAGTAGAATACCCAGGGTAATAGCTTGCATAAGGATTTGCGGCTGGTGTCTGTGGTGTTACTGTTGCGGTTGGAGCACTTGGGACGCTGCTGGATACACTACCAGACACAGCCGAAGGTTGCTGCTGTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCATCGTACTTCCCAGCTCCTTGAGTACTTCCAGTAGCACTTTGGGGAGCACCATAGTAATAGGAGGCATAAGCTGCTGCAGCCGGCGTCGAATGGTCAGATGTGGCAGTAGTGGTGGT                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD069072             [                                                                                                                                                 CAGTTGGGACCCCACCTGGAGGAGCACCGCCAACTGGGATAGTACCATACCCAGATGGATAAGTAGAATACCCAGGGTAATAACTTGCATAAGGATTTGCGGCTGGTGTCTGTGGTGTTACTGTTGCGGTAGGAGCACTTGGGACGCTGCTGGATACACTACCAGACACAGCCGAAGGTTGCTGCTGTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCATCGTACTTCCCAGCTCCTTGAGTACTTCCAGTAGCACTTTGGGCAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD144579             [                                                                                                                                                    TTGGGACCCCACCTGGAGGAGCACCGCCAACTGGGATAGTACCATACCCAGATGGATAAGTAGAATACCCAGGGTAATAGCTTGCATAAGGATTTGCGGCTGGTGTCTGTGGTGTTACTGTTGCGGTTGGAGCACTTGGGACGCTGCTGGATACACTACCAGGCACAGCCGAAGGTTGCTGCTGTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCATCGTACTTCCCAGCTCCTTGAGTACTTCCAGTAGTACTTTGGGGAGCACCATAGTAATAGGAGGCATAAGCTGCTGCAGCCGGCGTCGAATGGTCAGATGTGGCAGTAGT                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD144563             [                                                                                                                                                     TGGGACCCCACCTGGAGGAGCACCGCCAACTGGGATAGTACCATACCCAGATGGATAAGTAGAATACCCAGGGTAATAGCTTGCATAAGGATTTGCGGCTGGTGTCTGTGGTGTTACTGTTGCGGTTGGAGCACTTGGGACGCTGCTGGATACACTACCAGACACAGCCGAAGGTTGCTGCTGTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCATCGTACTTCCCAGCTCCTTGAGTACTTCCAGTAGCACTTTGGGGAGCACCATAGTAATAGGAGGCATAAGCTGCTGCAGCCGGCGTCGAATGGTCAGATGTGGCAGTAGTG                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD139050             [                                                                                                                                                                                                                                                                  GGTGTTACTGTTGCGGTTGGAGCACTTGTGACGCTGCTGGATACACTACCAGACACAGCCGAAGGTTGCTGCTGCTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCATCGTACTTCCCAGCTCCTTGAGTACTTCCAGTAGCACTTTGGGGAGCACCATAGTAATAGGGGGCATAAGCTGCTGCAGCCGGCGTCGAATGG                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD145549             [                                                                                                                                                                                                                                                                                                                                                                             CATCGCTGCATCGTACTTCCCAGCTCCTTGAGTACTTCCAGTAGCACTTTGGGGAGCACCATAGTAATAGGAGGCATAAGCTGCTGCAGCCGGCGTCGAATGGTCAGATGTGGCAGTAGTGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATTGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAAGAGCGAAGACGGTGGTGTTGATTTGGCGATTGATAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGCAGTGTACTGACTATACGGGAGTATAGTTNTTGTGGCGGCGGCTGTTGCCGCGACAAAAGTGGTTGGTT]




>consensus_10813#0
TGTCGTGTTACGCTTAATCAAAGCCGTCATCACCACCTCCAGCCGTTTCAAGACCCAATG
ATAGTGGAGCTACGAGGAATTAAGTTCATAAATCAATTTTAGCGATAACCGGTGTAATAT
TGACTCATTGCTGGCGGAGCGGCAGCAGTTGGGACCCCACCTGGAGGAGCACCGCCAACT
GGGATAGTACCATACCCAGATGGATAAGTAGAATACCCAGGGTAATAGCTTGCATAAGGA
TTTGCGGCTGGTGTCTGTGGTGTTACTGTTGCGGTTGGAGCACTTGGGACGCTGCTGGAT
ACACTACCAGACACAGCCGAAGGTTGCTGCTGTTGTTGCCACGCGTTAAACTGTTGTGCA
GCAGCCATCGCTGCATCGTACTTCCCAGCTCCTTGAGTACTTCCAGTAGCACTTTGGGGA
GCACCATAGTAATAGGAGGCATAAGCTGCTGCAGCCGGCGTCGAATGGTCAGATGTGGCA
GTAGTGGTGGTGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTG
TTGGTTTGGCGATTGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAG
CGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGC
GGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAAGAGCGAAGACGGTGGT
GTTGATTTGGCGATTGATAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGA
GCGAGCGAGTGTATTTTTGAATTGCAGTGTACTGACTATACGGGAGTATAGTTNTTGTGG
CGGCGGCTGTTGCCGCGACAAAAGTGGTTGGTT

consensusID : consensus_10813#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 633
fasta sequence

                              [ACAGGAGGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGTGTGTCGATAGGCGTTGCGATGTAATTTGATTTGAGTTGTGTAGATGTGTTTGCAGATGGTTTGATTGTTTGATTGTTGATTTTCGCAGTGTATTTTGGTGTTGGTGTTGTTGTTGTTGTTGTTGTTATGTGAATGTTGAATAGTTGATATTAGTTTCATGATGAATTGTCCATACATTCGCGGTTTCCACTGACTCGAGAATTGATGTTGTTCTCCGTCACTTGGATGTCTGACTTTTGTGTTTGTGTTTGTGCGTGTGTGTTTATTGTGACGAGTTAGTGATATGTTGTTTTTGTGTTTAATTTGTTTATTTTGTAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTA-CCGAGAGATG-TGA-GCGAGCGAG-T-GTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGC]

[+] EMBL CD085933             [ACAGGAGGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGTGTGTCGCTCGGCGTTGCGATGTAATTTGATTTGAGTTGCGTNGATGTGTTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD085946             [ACAGGAGGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGTGTGTCGATAGGCGTTGCGATGTAATTTGATTTGAGTTGTGTAGATGTGTTTGCAGATGGTTTGATTGTTTGATTGTTGATTTTCGCAGTGTATTTTGGTGTTGGTGTTGTTGTTGTTGTTGTTGTTATGTGAATGTTGAATAGTTGATATTAGTTTCATGATGAATTGTCCATACATTCGCGGTTTCCACTGACTCGAGAATTGATGTTGTTCTCCGTCACTTGGATGTCTGACTTTTGTGTTTGTGTTCGTGCGTGTGTGTTTATTGTGACGAGTTANTGATATGTTGTTTTTGTGTTTAATTTGTTTATTTTGTACGAG                                                                                                                                                       ]
[+] EMBL CD085918             [cCAGGAGGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGCGATGTGTGTCGATAGGCGTTGCGATGTAATTTGATTTGAGTTGTGTAGATGTGTTTGCAGATGGTTTGATTGTTTGATTGTTGATTTTCGCAGTGTATTTTGGTGTTGGTGTTGTTGTTGTTGTTGTTGTTATGTGAATGTTGAATAGTTGATATTAGTTTCATGATGAATTGTCCATACATTCGCGGTTTCCACTGACTCGAGAATTGATGTTGTTCTCCGTCACTTGGATGTCTGACTTTTGTGTTTGTGTTTGTGCGTGTGTGTCTATTGTGACGAGTTAGTGATATGTTGTTCTTG                                                                                                                                                                                 ]
[+] EMBL CD085953             [                  GTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGTGTGTCGATAGGCGTTGCGATGTAATTTGATTTGAGTTGTGTAGATGTGTTTGCAGATGGTTTGATTGTTTGATTGTTGATTTTCGCAGTGTATTTTGGTGTTGGTGTTGTTGTTGTTGTTGTTGTTATGTGAATGTTGAATAGTTGATATTAGTTTCATGATGAATTGTCCATACATTCGCGGCTTCCACTGACTCGAGAATTGATGTTGTTCTCCGTCTCTTGGATGTCTGACT                                                                                                                                                                                                                                             ]
[+] EMBL CD113613             [                                                                                     TTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGTGTGTCGATAGGCGTTGCGATGTGATTTGATTTGAGTTGTGTAGATGTGTTTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD155167             [                                                                                                      GTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGGTGTGTGTCGATAGGCGTTGCGATGTGATTTGATTTGAGTTGTGTAGATGTGTTTGCAGATGGTTTGATTGTTTGATTGTTGATTTTCGCAGTGTATTTTGGTGTTGGTGTTGTTGTTGTTGTTGTTGTTATGTGAATGTTGAATAGTTGATATTAGTTTCATGATGAATTGTCCATACATTCGCGGTTTCCACTGACTCGAGAATTGATGTTGTTCCCCGTCACTTGGATGTCTGACTTTTGTGTTTGTGTTTGTGCGTGTGTGTTTATTGTGACGAGTTAGTGATATGTTGTTTTTGTGTTTAATTTGTTTATTTTGTAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTA CCGAGAGATG TGA GCGAGCGAG T GTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGC]
[-] EMBL CD094185             [                                                                                                                                                                       TGTCGATAGGCGTTGCGATGTGATTTGATTTGAGTTGTGTAGATGTGTTTGCAGATGGTTTGATTGTTTGATTGTTGATTTTCGCAGTGTATTTTGGTGTTGGTGTTGTTGTTGTTGTT                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD151613             [                                                                                                                                                                                                                                                                                                                                                                                                                      GTTTGTGTTTGGGCGTGTGTGTTTATTGTGACGAGTTAGTGATATGTTGTTTTTGTGTTTAATTTGTTTATTTTGTAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAATTGTATTCGAACGAAGATGACGC AGC AGCTAGT TTTTTTAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTG                ]




>consensus_10813#1
ACAGGAGGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGA
GTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTG
GTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGTGTGTCGATAGGCGT
TGCGATGTAATTTGATTTGAGTTGTGTAGATGTGTTTGCAGATGGTTTGATTGTTTGATT
GTTGATTTTCGCAGTGTATTTTGGTGTTGGTGTTGTTGTTGTTGTTGTTGTTATGTGAAT
GTTGAATAGTTGATATTAGTTTCATGATGAATTGTCCATACATTCGCGGTTTCCACTGAC
TCGAGAATTGATGTTGTTCTCCGTCACTTGGATGTCTGACTTTTGTGTTTGTGTTTGTGC
GTGTGTGTTTATTGTGACGAGTTAGTGATATGTTGTTTTTGTGTTTAATTTGTTTATTTT
GTAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGT
AGTTGTACCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGA
CGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGC

consensusID : consensus_10813#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 466
fasta sequence

                              [ATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTG]

[-] EMBL CD133392             [ATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTG]




>consensus_10813#2
ATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTT
TTGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGG
TTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAG
CGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCG
GCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTG
GTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGA
GCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGC
GACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTG

consensusID : consensus_10813#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 441
fasta sequence

                              [GGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAAACATGAGTCTAGCTATTGGTATTGACTTGGGAACTACATATTCCTGCGTCGGCATTTTCATGAACGAGAACGTCGAGATCATCAGCAACGAGCAGGGTAACAGAACTACCCCCTCCTATGTTGCTTTTACCGACACTGAAAGACTGATCGGTGAAGCCGCCAAGAACCAGGTTGAACGCAACCCTGAAAACACTGTTTTCGATGCCAAACGTCTGATCGGTCGCAAGTTCAACGATAAGGAGGTTCAGAGCGATATGAAGCACTGGCCCTTCAAGGTCGTCGACGGATCTGATGGAAAGCCAATGATCGTCGTCAAGTTCAAAGGTCAGGAAGAGA]

[+] EMBL CD093890             [GGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAAACATGAGTCTAGCTATTGGTATTGACTTGGGAACTACATATTCCTGCGTCGGCATTTTCATGAACGAGAACGTCGAGATCATCAGCAACGAGCAGGGTAACAGAACTACCCCCTCCTATGTTGCTTTTACCGACACTGAAAGACTGATCGGTGAAGCCGCCAAGAACCAGGTTGAACGCAACCCTGAAAACACTGTTTTCGATGCCAAACGTCTGATCGGTCGCAAGTTCAACGATAAGGAGGTTCAGAGCGATATGAAGCACTGGCCCTTCAAGGTCGTCGACGGATCTGATGGAAAGCCAATGATCGTCGTCAAGTTCAAAGGTCAGGAAGAGA]
[+] EMBL CD093891             [GGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAAACATGAGTCTAGCTATTGGTATTGACTTGGGAACTACATATTCCTGCGTCGGCATTTTCATGAACGAGAACGTCGAGATCATCAGCAACGAGCAGGGTAACAGAACTACCCCCTCCTATGTTGCTTTTACCGACACTGAAAGACTGATCGGTGAAGCCGCCAAGAACCAGGTTGAACGCAACCCTGAAAACACTGTTTTCGATGCCAAACGTCTGATCGGTCGCAAGTTCAACGATCAGGAGGTTCAGAGCGATATGAAGCACTGGCCCTTCAAGGTCGTCGACGGATCTGATGGAAAGCCAATGATCGTCGT                       ]




>consensus_10813#3
GGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTG
GCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAAACATGAGTCTAGCTA
TTGGTATTGACTTGGGAACTACATATTCCTGCGTCGGCATTTTCATGAACGAGAACGTCG
AGATCATCAGCAACGAGCAGGGTAACAGAACTACCCCCTCCTATGTTGCTTTTACCGACA
CTGAAAGACTGATCGGTGAAGCCGCCAAGAACCAGGTTGAACGCAACCCTGAAAACACTG
TTTTCGATGCCAAACGTCTGATCGGTCGCAAGTTCAACGATAAGGAGGTTCAGAGCGATA
TGAAGCACTGGCCCTTCAAGGTCGTCGACGGATCTGATGGAAAGCCAATGATCGTCGTCA
AGTTCAAAGGTCAGGAAGAGA

consensusID : consensus_10813#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 351
fasta sequence

                              [GAATATGATGTATTACGAGGAATTAAGTTCATAAATCAATTTTAGCGATAACCGGTGTAATATTGACTCATTGCTGGCGGAGCGGCAGCAGTTGGGACCCCACCTGGAGGAGCACCGCCAACTGGGATAGTACCATACCCAGATGGATAAGTAGAATACCCAGGGTAATAGCTTGCATAAGGATTTGCGGCTGGTGTCTGTGGTGTTACTGTTGCGGTTGGAGCACTTGGGACGCTGCTGGATACACTACCAGACACAGCCGAAGGTTGCTGCTGTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCATC-GTACTTCCCAGCTCCTTGAGTACTTCCAGTA]

[-] EMBL CD138145             [GAATATGATGTATTACGAGGAATTAAGTTCATAAATCAATTTTAGCGATAACCGGTGTAATATTGACTCATTGCTGGCGGAGCGGCAGCAGTTGGGACCCCACCTGGAGGAGCACCGCCAACTGGGATAGTACCATACCCAGATGGATAAGTAGAATACCCAGGGTAATAGCTTGCATAAGGATTTGCGGCTGGTGTCTGTGGTGTTACTGTTGCGGTTGGAGCACTTGGGACGCTGCTGGATACACTACCAGACACAGCCGAAGGTTGCTGCTGTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCATC GTACTTCCCAGCTCCTTGAGTACTTCCAGTA]
[-] EMBL CD069076             [                                                                                        CAGTTGGGACCCCACCTGGAGGAGCACCGCCAACTGGGATAGTACCATACCCAGATGGATAAGTAGAATACCCAGGGTAATAGCTTGCATAAGGATTTGCGGCTGGTGTCTGTGGTGTTACTGTTGCGGTTGGAGCACTTGGGACGCTGCTGGATACACTACCAGACACAGCCGAAGGTTGCTGCTGTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCATCTGTACTTCCCAGCTCCTTGAGTACTTCCAGTA]




>consensus_10813#4
GAATATGATGTATTACGAGGAATTAAGTTCATAAATCAATTTTAGCGATAACCGGTGTAA
TATTGACTCATTGCTGGCGGAGCGGCAGCAGTTGGGACCCCACCTGGAGGAGCACCGCCA
ACTGGGATAGTACCATACCCAGATGGATAAGTAGAATACCCAGGGTAATAGCTTGCATAA
GGATTTGCGGCTGGTGTCTGTGGTGTTACTGTTGCGGTTGGAGCACTTGGGACGCTGCTG
GATACACTACCAGACACAGCCGAAGGTTGCTGCTGTTGTTGCCACGCGTTAAACTGTTGT
GCAGCAGCCATCGCTGCATCGTACTTCCCAGCTCCTTGAGTACTTCCAGTA

consensusID : consensus_10813#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 308
fasta sequence

                              [TGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGTGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGTGTGTCGATAGGCGTTGCGATGTGATTTGATTTGAGTTGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGTGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGT]

[+] EMBL CD198136             [TGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGTGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGTGTGTCGATAGGCGTTGCGATGTGATTTGATTTGAGTTGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGTGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGT]




>consensus_10813#5
TGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGTGGCGGTGGCGGCG
ACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGTGTGTC
GATAGGCGTTGCGATGTGATTTGATTTGAGTTGTGTAGTTGTATCGAGAGATGTGAGCGA
GCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGT
GGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTG
TGTGATGT

consensusID : consensus_10813#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 147
fasta sequence

                              [TCACACCCAATCTTGCCAAAGATGCTGGTACAATTGCTGGTTTGAATATACTCCGGATTATTAATGAACCAACTGCTGCTGCAATTGCTTACGGTCTAGATAAGAAAGATGGTGAGAAAAATATTCTGATATTTGATCTTGGTGGAG]

[+] EMBL CD168739             [TCACACCCAATCTTGCCAAAGATGCTGGTACAATTGCTGGTTTGAATATACTCCGGATTATTAATGAACCAACTGCTGCTGCAATTGCTTACGGTCTAGATAAGAAAGATGGTGAGAAAAATATTCTGATATTTGATCTTGGTGGAG]




>consensus_10813#6
TCACACCCAATCTTGCCAAAGATGCTGGTACAATTGCTGGTTTGAATATACTCCGGATTA
TTAATGAACCAACTGCTGCTGCAATTGCTTACGGTCTAGATAAGAAAGATGGTGAGAAAA
ATATTCTGATATTTGATCTTGGTGGAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10813#0      TGTCGTGTTACGCTTAATCAAAGCCGTCATCACCACCTCCAGCCGTTTCAAGACCCAATG 60
consensus_10813#4      --------------------------------------------------------GAAT 4
consensus_10813#1      ---ACAGGAGGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATT 57
consensus_10813#5      ------------------------------------------------------TGAATT 6
consensus_10813#2      -------------------------------ATGTGAGCGAGCGAGTGTATTTTTGAATT 29
consensus_10813#3      ------------------------------------------------------------
consensus_10813#6      ------------------------------------------------------------
                                                                                   

consensus_10813#0      ATAGTGGAGCTACGAG----GAATTAAGTTCATAAATCAATTT---TAGCGATAACCGGT 113
consensus_10813#4      ATGATGTA-TTACGAG----GAATTAAGTTCATAAATCAATTT---TAGCGATAACCGGT 56
consensus_10813#1      GGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGA 117
consensus_10813#5      GGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGTGGCGGTGGCGGCGACAAGA 66
consensus_10813#2      GGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGG------------CGACAAGA 77
consensus_10813#3      -----------------------------------------------GGCGGCGACAAGA 13
consensus_10813#6      ------------------------------------------------------------
                                                                                   

consensus_10813#0      GTAAT--ATTGACTCATTGCTGGCGGAGCGGCAGCAGTTGGGACCCCACCTG--GAGGAG 169
consensus_10813#4      GTAAT--ATTGACTCATTGCTGGCGGAGCGGCAGCAGTTGGGACCCCACCTG--GAGGAG 112
consensus_10813#1      GTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGTGTGTCGATAGG 177
consensus_10813#5      GTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGTGTGTCGATAGG 126
consensus_10813#2      GTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGG----TGGTGTTG-GTTTGGCGATGGA 132
consensus_10813#3      GTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGG----TGGTGTTG-GTTTGGCGATGGA 68
consensus_10813#6      ------------------------------------------------------------
                                                                                   

consensus_10813#0      CACCGCCAACTGGGAT------AGTACCATACCCAGATGGATAAGTA----GAATACCC- 218
consensus_10813#4      CACCGCCAACTGGGAT------AGTACCATACCCAGATGGATAAGTA----GAATACCC- 161
consensus_10813#1      CGTTGCGATGTAATTTGATTTGAGTTGTGTAGATGTGTTTGCAGATGGTTTGATTGTTTG 237
consensus_10813#5      CGTTGCGATGTGATTTGATTTGAGTTGTGTAGTTGTATCGAGAGATG---TGAGCGAGCG 183
consensus_10813#2      ----GAGA-GTGGACTG--TGAAGAGGTGTAGTTGTATCGAGAGATG---TGAGCGAGCG 182
consensus_10813#3      ----GAGA-GTGGACTG--TGAAGAGGTGTAGTTGTATCGAGAAACA---TGAGT--CTA 116
consensus_10813#6      --------------------------------TCACACCCAATCTTG--CCAAAGATGCT 26
                                                                           *       

consensus_10813#0      AGGGTAATAGCTTGCATAAGGATTTGCGG--CTGGTGTCTGTGGTGTTACTGTTGCGGTT 276
consensus_10813#4      AGGGTAATAGCTTGCATAAGGATTTGCGG--CTGGTGTCTGTGGTGTTACTGTTGCGGTT 219
consensus_10813#1      ATTGTTGATTTTCGCAGTGTATTTTGGTG--TTGGTGTTGTTGTTGTTGTTGTTGTTATG 295
consensus_10813#5      AGTGT--ATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGTG 241
consensus_10813#2      AGTGT--ATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCG 240
consensus_10813#3      GCTATTGGTATTGACTTGGGAACTACATATTCCTGCGTCGGCATTTTCATGAACGAGAAC 176
consensus_10813#6      GGTACAATTGCTGGTTTGAATATACTCCGGATTATTAATGAACCAACTGCTGCTGCAATT 86
                                  *                                          *     

consensus_10813#0      GGAGCACTTGGGA--CGCTGCTGGATACACTAC-CAG--ACACAGCCGAAGGTTGCTGCT 331
consensus_10813#4      GGAGCACTTGGGA--CGCTGCTGGATACACTAC-CAG--ACACAGCCGAAGGTTGCTGCT 274
consensus_10813#1      TGAATGTTGAATAGTTGATATTAGTTTCATGAT-GAATTGTCCATACATTCGCGGTTTCC 354
consensus_10813#5      GCGGTGGCGGCGA--CAAGAGTGGTTGGTTGAT-GAGTTTCAGGTGAGTTGACGGGTGTT 298
consensus_10813#2      GCGGTGGCGGCGA--CAAGAGTGGTTGGTTGAT-GAGTTTCAGGAGCGAAGACGG-TGGT 296
consensus_10813#3      GTCGAGATCATCA---GCAACGAGCAGGGTAACAGAACTACCCCCTCCTATGTTGCTTTT 233
consensus_10813#6      GC--TTACGGTCT----AGATAAGAAAGATGGTGAGAAAAATATTCTGATATTTGATCTT 140
                                              *                              * *   

consensus_10813#0      GTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCA----TCGTACTTCCCA 387
consensus_10813#4      GTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCA----TCGTACTTCCCA 330
consensus_10813#1      ACTGACTCGAGAATTGATGTTGTTCTCCGTCACTTGGATGTCTGACTTTTGTGTTTGTGT 414
consensus_10813#5      TGTGTGATGT-------------------------------------------------- 308
consensus_10813#2      GTTGGTTTGGCGATGGAGAGAGTGGACTGTGA---AGAGGTGTAG---TTGTATCGAGAG 350
consensus_10813#3      ACCGACACTGAAAGACTGATCGGTGAA-GCCGCCAAGAACCAGGTTGAACGCAACCCTGA 292
consensus_10813#6      GGTGGAG----------------------------------------------------- 147
                          *                                                        

consensus_10813#0      GC-TCCTTGAGTACTTCCAGTAGCACTTTGGGGAGCACCATAGTAATAGGAGGCATAAGC 446
consensus_10813#4      GC-TCCTTGAGTACTTCCAGTA-------------------------------------- 351
consensus_10813#1      TTGTGCGTGTGTGTTTATTGTGACGAGTTAGTGATATGTTGTTTTTGTGTTTAATTTGTT 474
consensus_10813#5      ------------------------------------------------------------
consensus_10813#2      ATGTGAGCGAGCGAGTGTATTTTTGAATTGG-AGTGTACTGACTAGACGGGAGTATAGTT 409
consensus_10813#3      AA--ACACTGTTTTCGATGCCAAACGTCTGATCGGTCGCAAGTTCAACGATAAGGAGGTT 350
consensus_10813#6      ------------------------------------------------------------
                                                                                   

consensus_10813#0      TGCTGCAGCCGGCGTCGAATGGTCAGATGTGGCAGTAGTGGTGGTGGCGACAAGAGTGGT 506
consensus_10813#4      ------------------------------------------------------------
consensus_10813#1      TATTTTGTAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAG 534
consensus_10813#5      ------------------------------------------------------------
consensus_10813#2      T---TTGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTG 466
consensus_10813#3      CAGAGCG-ATATGAAGCACTGGCCCTTCAAGGTCGTCGACGGATCTGATGGAAAGCCAAT 409
consensus_10813#6      ------------------------------------------------------------
                                                                                   

consensus_10813#0      TGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATTGAGAGAGTGGAC 566
consensus_10813#4      ------------------------------------------------------------
consensus_10813#1      AGGTGTAGTTGTACCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTG 594
consensus_10813#5      ------------------------------------------------------------
consensus_10813#2      ------------------------------------------------------------
consensus_10813#3      GATCGTCGTCAAGTTCAAAGGTCAGGAAGAGA---------------------------- 441
consensus_10813#6      ------------------------------------------------------------
                                                                                   

consensus_10813#0      TGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAG 626
consensus_10813#4      ------------------------------------------------------------
consensus_10813#1      ACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGC--------------------- 633
consensus_10813#5      ------------------------------------------------------------
consensus_10813#2      ------------------------------------------------------------
consensus_10813#3      ------------------------------------------------------------
consensus_10813#6      ------------------------------------------------------------
                                                                                   

consensus_10813#0      TGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGG 686
consensus_10813#4      ------------------------------------------------------------
consensus_10813#1      ------------------------------------------------------------
consensus_10813#5      ------------------------------------------------------------
consensus_10813#2      ------------------------------------------------------------
consensus_10813#3      ------------------------------------------------------------
consensus_10813#6      ------------------------------------------------------------
                                                                                   

consensus_10813#0      TTGGTTGATGAGTTTCAAGAGCGAAGACGGTGGTGTTGATTTGGCGATTGATAGAGTGGA 746
consensus_10813#4      ------------------------------------------------------------
consensus_10813#1      ------------------------------------------------------------
consensus_10813#5      ------------------------------------------------------------
consensus_10813#2      ------------------------------------------------------------
consensus_10813#3      ------------------------------------------------------------
consensus_10813#6      ------------------------------------------------------------
                                                                                   

consensus_10813#0      CTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGCA 806
consensus_10813#4      ------------------------------------------------------------
consensus_10813#1      ------------------------------------------------------------
consensus_10813#5      ------------------------------------------------------------
consensus_10813#2      ------------------------------------------------------------
consensus_10813#3      ------------------------------------------------------------
consensus_10813#6      ------------------------------------------------------------
                                                                                   

consensus_10813#0      GTGTACTGACTATACGGGAGTATAGTTNTTGTGGCGGCGGCTGTTGCCGCGACAAAAGTG 866
consensus_10813#4      ------------------------------------------------------------
consensus_10813#1      ------------------------------------------------------------
consensus_10813#5      ------------------------------------------------------------
consensus_10813#2      ------------------------------------------------------------
consensus_10813#3      ------------------------------------------------------------
consensus_10813#6      ------------------------------------------------------------
                                                                                   

consensus_10813#0      GTTGGTT 873
consensus_10813#4      -------
consensus_10813#1      -------
consensus_10813#5      -------
consensus_10813#2      -------
consensus_10813#3      -------
consensus_10813#6      -------