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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10921#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1501 fasta sequence
[ATGTCTTCGATGGATGGTGATCGTGGTGATTTCAATGACGATCATGATAGGGATGAGGGCTTTCCAGACGAAGATCCTCCGTTTCAGTCAGAAAATACCTTTTCGGATGATGGGCGATATCAAGATGATATGCGGTACCCAGAGGATCGTTATCCAGATGATTCCCCTGTGCATAAACATGATGACCGTTACCCGGGACCCGGACCCCGTCATATGAGAATGATGAGGCCTCAATTTCGTCCAAGATTCCAGGGTGGCTACAGGGGGCACCCACGAATGCAGATGCATGGTGGCGGTCGAGGGAATTTCATGCGATCAGGAATGGGTCCACATCGTGGTCCCCAATATGATGGTTACGGTCAT-CCTATGGGCATGAACCGAGGATATCCACCAAGATTTAGTCCACAGTATCCTGGACGTTTTCAAGGCATAAGCGAAGACCAAATGGATGAGCAAATGGACGAAACACATCCTTCCGGCGACATGAACTACCCAGGTCACGGGGATATGCCGATGCCCCCTAACGCGTATCCTAATATGCAGCACATGCGCATGCGCGGTCCACCACCTCAATTCATGCCACCTAACAAACAGATGCCTCCTGACCACCAACAACCAGGTGCTCTCCCACCGGGTTCTGGCGGGCACCAGCCCTATGGTACAAACAATTCGTTCAATAGTCCACCTGGGTCTCATTATGGTGGACCACAGGCACCTTATGGTGGACCTGGAGCTCCTTATTCCGGAAACCAAAACAATCAACCCTTCGGAGCTCCACCGTTCAATGGCCCTCCTGTGTCTCAGTTCGGCGGTCCCCCATACAATGGTCCTCCAGTGTCACAGATGGGTGATCCTGGTTCAAATCTACCATCAGGACAGCAGTTTGCTCCACCCACAAGGCCATTTGGAGCACCTCCCGCTGGCCCCTTTCCCGTTCCTCCAACCGCGCCTTATGGCGGCCCAGGGCCCAACTCGCAACCCGCCGGGTCTTACAATGGCCCTTCACAATTTGCTGGGGCTCCAACCGGACCTCAAAGTGCTTCGTCGCAGAGTTTTACAAGTCGTTAACTAATGATTGGGAGGACCACCTTGCGGTGAAGCACTTTTCTGTTGAAGGTCAGTTAGAGTTCCGTGCATTGCTTTTTGTGCCTAAACGCGCACCAATTGATATGTTTGAAGGGACGCGAAAAAAGCGGAGCAACATTAAATTGTATGTGCGAAGAGTCCTCATCATGGATACCTGTGAGGATATGATTCCCGAGTACTTGAGTTTCGTTCGCGGAGTTGTCGACAGCGAGGACCTGCCTCTTAACATCAGTCGTGAGGAGTTGTCTGATGACGAATCTGTAAAAGTAGAGTCGAAAGAGACTGAAGAATCTGATGACAAGCCGAAAGTCGAAGATCTAGATGAAGACTAGGAAGACGAGAATAAGGAAAAGAAGAAAAAGAAGAAGGTAACGGAGAAGTATACTGAGGAAGAACAGTTGAACAAGCTCAAGCC]
[+] EMBL CD122787 [ATGTCTTCGATGGATGGTGATCGTGGTGATTTCAATGACGATCATGATAGGGATGAGGGCTTTCCAGACGAAGATCCTCCGTTTCAGTCAGAAAATACCTTTTCGGATGATGGGCGATATCAAGATGATATGCGGTACCCAGAGGATCGTTATCCAGATGATTCCCCTGTGCATAAACATGATGACCGTTACCCGGGACCCGGACCCCGCCATATGAGAATGATGAGGCCTCAATTTCGTCCAAGATTCCAGGGTGGCTACAGGGGGCACCCACGAATGCAGATGCATGGTGGCGGTCGAGGGAATTTCATGCGATCAGGAATGGGTCCACATCGTGGTCCCCAATATGATGGTTACGGTC ]
[-] EMBL CD123130 [ TGTCTTCGATGGATGGTGATCGTGGTGATTTCGATGACGATCATGGTAGGGGTGAGGGCTTTCCAGACGAAGATCCTCCGTTTCAGTCAGAAAATACCTTTTCGGATGATGGGCGATATCAAGATGATATGCGGTACCCAGAGGATCGTTATCCAGATGATTCCCCTGTGCATAAACATGATGACCGTTACCCGGGACCCGGACCCCGTCATATGAGAATGATGAGGCCTCAATTTCGTCCAAGATTCCAGGGTGGCTACAGGGGGCACCCACGAATGCAGATGCATGGTGGTGGTCGAGGGAATTTCATGCGATCAGGAATGGGTCCACATCGTGGTCCCCAATATGATGGTTACGGTCA ]
[+] EMBL CD182080 [ GATAGGGATGAGGGCTTTCCAGACGAAGATCCTCCGTTTCAGTCAGAAAATACCTTTTCGGATGATGGGCGATATCAAGATGATATGCGGTACCCAGAGGATCGTTATCCAGATGATTCCCCTGTGCATAAACATGATGACCGTTACCCGGGACCCGGACCCCGTCATATGAGAATGATGAGGCCTCAATTTCGTCCAAGATTCCAGGGTGGCTACAGGGGGCACCCACGAATGCAGATGCATGGTGGCGGTCGAGGGAATTTCATGCGATCAGGAATGGGTCCACATCGTGGTCCCCAATATGATGGGTACGGTCATCCCTAT GGCATGAA ]
[+] EMBL CD095743 [ atATGATTCCCCCGTGCATAAACATGATGACCGGTACCCGGGACCCGGACCCCGTCCTATGAGAATGATGAGGCCTCAATTTCGTCCAAGATTCCAGGGTGGGTACAGGGGGCACCCACGAATGCAGATGCATGGAGGCGGTCGAGGGAATTTGATGCGATCAGGAATGGGTCCACATCGTGGTCCCCAATATGATGGTTACGGTCAT ACTATGGGCATGAACCGAGGATATCCACCAAGATTTAGTCCACAGTATCCTGGACGTTTTCAAGGCATAAGCGAAGACCAAATGGATGA ]
[+] EMBL CD164191 [ GTGCATAAACATGATGACCGTTACCCGGGACCCGGACCCCGTCATATGAGAATGATGAGGCCTCAATTTCGTCCAAGATTCCAGGGTGGCTACAGGGGGCACCCACGAATGCAGATGCATGGTGGCGGTCGAGGGAATTTCATGCGATCAGGAATGGGTCCACATCGTGGTCCCCAATATGATGGTTACGGTCAT CCTATGGGCATGAACCGAGGATATCCACCAAGATTTAGTCCACAGTATCCTGGACGTTTTCAAGGCATAAGCGAAGACCAAATGGATGAGCAAATGGACGAAACACATCCTTCCGGCGACATGAACTACCCAGGTCACGGGGATATGCCGATGCCC ]
[+] EMBL CD071916 [ GACCGTTACCCGGGACCCGGACCCCGTCATATGAGAATGATGAGGCCTCAATTTCGTCCAAGATTCCAGGGTGGCTACAGGTGGCACCCACGAATGCAGATGCATGGTGGCGGTCGAGGGAATTTCATGCGATCAGGAATGGGTCCACATCGTGGTCCCCAATATGATGGTTACGGTCAT CCTATGAGCATGAACCGAGGATATCCACCAAGATTTAGTCCACAGTATCCTGGACGTTTTCAAGGCATAAGCGAAGACCAAATGGATGAGCAAATGGACGAAACACATCCTTCCGGCGACATGAACTACCCAGGTCACGGGGATATGCCGATGCCCCCTAACGCGTATCCTAATATGCA ]
[-] EMBL CD166090 [ GTGGCTACAGGGGGCACCCACGAATGCAGATGCATGGTGGCGGTCGAGGGAATTTCATGCGATCAGGAATGGGTCCACATCGTGGTCCCCAATATGATGGTTACGGTCAT CCTATGGGCATGAACCGAGGATATCCACCAAGATTTAGTCCACAGTATCCTGGACGTTTTCAAGGCATAAGCGAAGACCAAATGGATGAGCAAATGGACGAAACACATCCTTCCGGCGACATGAACTACCCAGGTCACGGGGATATGCCGATGCCCCCTAACGCGTATCCTAATATGCAGCACATGCGCA ]
[+] EMBL CD186377 [ TCGTGGTCCCCAATATGATGGTTACGGTCAT CCTATGGGCATGAACCGAGGATATCCACCAAGATTTAGTCCACAGTATCCTGGACGTTTTCAAGGCATAAGCGAAGACCAAATGGATGAGCAAATGGACGAAACACATCCTTCCGGCGACATGAACTACCCAGGTCACGGGGATATGCCGATGCCCCCTAACGCGTATCCTAATATGCAGCACATGCGCATGCGCGGTCCACCACCTCAATTCATGCCACCTAACAAACAGATGCCTCCTGACCACCAACAACCAGGTGCTCTCCCACCGGGTTCTGGCGGGCACCAGCCCTATGGTACAAACAATTCGTTCAATAGTCCACCTGGGTCTCATTATGGTGGACCACAGGCACCTTATGGTGGACCTGGAGCTCCTTATTCCGGAAAACAA ]
[+] EMBL CD093897 [ GGATATCCACCAAGATTTAGTCCACAGTATCCTGGACGTTTTCAAGGCATAAGCGAAGACCAAATGGATGAGCAAATGGACGAAACACATCCTTCCGGCGACATGAACTACCCAGGTCACGGGGATATGCCGATGCCCCCTAACGCGTATCCTAATATGCAGCACATGCGCATGCGCGGTCCACCACCTCAATTCATGCCACCTAACAAACAGATGCCTCCTGACCACCAACAACCAGGTGCTCTCCCACCGGGTTCTGGCGGGCACCAGCCCTATGGTACAAACAATTCGTTCAATAGTCCACCTGGGTCTCATTATGGTGGACCACAGGCACCTTATGGTGGACCTGGAGCTCCTTATTCCGGAAACCAAAACAATCAACCCTTCGGAGCTCCACCGTTCAATGGCCCTCCTGTGTCT ]
[+] EMBL CD063621 [ ATATCCACCAAGATTTAGTCCACAGTATCCTGGACGTTTTCAAGGCATAAGCGAAGACCAAATGGATGAGCAAATGGACGAAACACATCCTTCCGGCGACATGAACTACCCAGGTCACGGGGATATGCCGATGCCCCCTAACGCGTATCCTAATATGCAGCACATGCGCATGCGCGGTCCACCACCTCAATTCATGCCACC ]
[+] EMBL CD178431 [ tggaaggCACCTCAATTCATGCCACCTAACAAACAGATGCCTCCTGACCACCAACAACCAGGTGCTCTCCCACCGGGTTCTGGCGGGCACCAGCCCTATGGTACAAACAATTCGTTCAATAGTCCACCTGGGTCTCATTATGGTGGACCACAGGCACCTTATGGTGGACCTGGAGCTCCTTATTCCGGAAACCAAAACAATCAACCCTTCGGAGCTCCACCGTTCAATGGCCCTCCTGTGTCTCAGTTCGGCGGTCCCCCATACAATGGTCCTCCAGTGTCACAGATGGGTGATCCTGGTTCAAATCTACCATCAGGACAGCAGTTTGCTCCACCCACAAGGCCATTTGGAGCACCT ]
[+] EMBL CD178693 [ TCATGCCACCTAACAAACAGATGCCTCCTGACCACCAACAACCAGGTGCTCTCCCACCGGGTTCTGGCGGGCACCAGCCCTATGGTACAAACAATTCGTTCAATAGTCCACCTGGGTCTCATTATGGTGGACCACAGGCACCTTATGGTGGACCTGGAGCTCCTTATTCCGGAAACCAAAACAATCAACCCTTCGGAGCTCCACCGTTCAATGGCCCTCCTGTGTCTCAGTTCGGCGGTCCCCCATACAATGGTCCTCCAGTGTCACAGATGGGTGATCCTGGTTCAAATCTACCATCAGGACAGCAGTTTGCTCCACCCACAAGGCCATTTGGAGCACCTCCCGCTGGCC ]
[+] EMBL CD095595 [ CAACAACCAGGTGCTCTCCCACCGGGTTCTGGCGGGCACCAGCCCTATGGTACAAACAATTCGTTCAATAGTCCACCTGGGTCTCATTATGGTGGACCACAGGCACCTTATGGTGGACCTGGAGCTCCTTATTCCGGAAACCAAAACAATCAACCCTTCGGAGCTCCACCGTTCAATGGCCCTCCTGTGTCTCAGTTCGGCGGTCCCCCATACAATGGTCCTCGAGTGTCACAGATGAGTGATCCTGATTCAAATCTACCATCAGGACAGCAGTTTG ]
[+] EMBL CD095552 [ CAGCCCTATGGTACAAACAATTCGTTCAATAGTCCACCTGGGTCTCATTATGGTGGACCACAGGCACCTTATGGTGGACCTGGAGCTCCTTATTCCGGAAACCAAAACAATCAACCCTTCGGAGCTCCACCGTTCAATGGCCCTCCTGTGTCTCAGTTCGGCGGTCCCCCATACAATGGTCCTCCAGTGTCACAGATGGGTGATCCTGGTTCAAATCTACCATCAGGACAGCAGTTTGC ]
[+] EMBL CD111304 [ AAAACAATCAACCCTTCGGAGCTCCACCGTTCAATGGCCCTCCTGTGTCTCAGTTCGGCGGTCCCCCATACAATGGTCCTCCAGTGTCACAGATGGGTGATCCTGGTTCAAATCTACCATCAGGACAGCAGTTTGCTCCACCCACAAGGCCATTTGGAGCACCTCCCGCTGGCCCCTTTCCCGTTCCTCCAACCGCGCCTTATGGCGGCCCAGGGCCCAACTCGCAACCCGCCGGGTCTTACAATGGCCCTTCACAATTTGCTGGGGCTCCAACCGGACCTCAAAGTGCTTCGTCGCAGAGTTTTACAAGTCGTTTACTAAT ]
[-] EMBL CD110877 [ AATGGCCCTCCTGTGTCTCAGTTCGGCGGTCCCCCATACAATGGTCCTCCAGTGTCACAGATGGGTGATCCTGGTTCAAATCTACCATCAGGACAGCAGTTTGCTCCACCCACAAGGCCATTTGGAGCACCTCCCGCTGGCCCCTTTCCCGTTCCTCCAACCGCGCCTTACGGCGGCCCAGGGCCCAACTCGCAACCCGCCGGGTCTTACAATGGCCCTTCACAATTTGCTGGGGCTCCAACCGGACCTCAAAGTGCTTCGTCGCAGAGTTTTACAAGTCGTTAACTAATGATTGGGAGGACCACCTTGCGGTGAAGCACTTTTCTGTTGAAGGTCAGTTAGAGTTCCGTGCATTGCTTTTTGTGCCTAAACGCGCACCAATTGATATGTTTGAAGGGACGCGAAAAAAGCGGAGCAACATTAAATTGTATGTGCGAAGAGTCCTCATCATGGATACCTGTGAGG ]
[-] EMBL CD098429 [ TCGGCGGTCCCCAATACAATGGTCCTCCAGTGTCACAGATGGGTGATCCTGGTTCAAATCTACCATCAGGACAGCAGTTTGCTCCACCCACAAGGCCATTTGGAGCACCTCCCGCTGGCCCCTTTCCCGTTCCTCCAACCGCGCCTTATGGCGGCCCAGGGCCCAACTCGCAACCCGCCGGGTCTTACAATGGCCCTTCACAATTTGCTGGGGCTCCAACCGGACCTCAAAGTGCTTCGTCGCAGAGTTTTACAAGTCGTTAACTAATGATTGGGAGGACCACCTTGCGGTGAAGCACTTTTCTGTTGAAGGTCAGTTAGAGTTCCGTGCATTGCTTTTTGTGCCTAAACGCGCACCAATTGATATGTTCGAAGGGACGCGAAAAAAGCGGAGCAACATTAAATTGTATGTGCGAAGAGTCCTCATCATGGATACCTGTGAGG ]
[+] EMBL CD094825 [ GGGACGCGGAAAAAGCGGAGCAACATTAAATTGTATGTGCGAGGAGTCCTCATCATGGATACCTGTGAGGATATGATTCCCGAGTACTTGAGTTTCGTTCGCGGAGTTGTCGACAGCGAGGACCTGCCTCTTAACATCAGTCGTGAGGAGTTGTCTGATGACGAATCTGTAAAAGTAGAGTCGAAAGAGACTGAAGAATCTGATGACAAGCCGAAAGTCGAAGATCTAGATGAAGACTAGGAAGACGAGAATAAGGAAAAGAAGAAAAAGAAGAAGGTAACGGAGAAGTATACTGAGGAAGAACAGTTGAACAAGCTCAAGCC]
consensusID : consensus_10921#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 600 fasta sequence
[CTAGATGACAGAATCTGTAACAAGATAAAGTCTGAAAGAGGACTGAACGAATCGTGATGACCTCGCCCAAAGTCTAGAATCTCGATGAAGACGAGGTAACACCAGAATAAGGAAGAGAAGAAAAAGAAGAAGGTAACGGATAATTGTACTGACGAACAACAGTTGAACAAGCTCAAGCCGGTCTGGACGCGCAATCCCCAAGATATAACTACAGAAGAGTATGCACGAGTTTTACAAGTCGTTAGCTAGTGATTGGGAGGACCACCTTGCAGTGAAGCACTTTTCTGTAGAAGGTCAGTTAAAGTTCCGTGCATTGGTTTTTGTGCCTAAACGCGCACCAATTGATATGTGTGAAGGGACGCGGAAAAAGCGGAGCAACATTAAATTGTATGTGCGAAGAGTCCTCATCATGGATACCTGTGAGGATATGATTCCCGAGTACTTGAGTTTCGTTCGCGGAGTTGTCGACAGCGAGGACCTGCCTCTTAACATCAGTCGTGAGGTGTTGCAACAGAACAACGTATTAAAGGTCATCCGTAAGAGCCTGGTCAGGAAATGTATTGAATTATTTGAAGAAGAATCCTTACCATTCACTGCCGA]
[+] EMBL CD183971 [CTAGATGACAGAATCTGTAACAAGATAAAGTCTGAAAGAGGACTGAACGAATCGTGATGACCTCGCCCAAAGTCTAGAATCTCGATGAAGACGAGGTAACACCAGAATAAGGAAGAGAAGAAAAAGAAGAAGGTAACGGATAATTGTACTGACGAACAACAGTTGAACAAGCTCAAGCCGGTCTGGACGCGCAATCCCCAAGATTTAACTACAGAAGAGTATGCACGAGTTTTACAAGTCGTTAGCTAGTGATTGGGAGGACCACCTTGCAGTGAAGCACTTTTCTGTAGAAGGTCAGTTAAAGTTCCGCGCATTGGTTTTTGTGCCTAAACGCGCACCAATTGATATGTGTGAAGGGACGCGGAAAAAGCGGAGCATCATTAAATTGTATGTGCGAAGAGTCCTCATCATGGATACCTGTGAGGATATGATTCCCGACTACTTGAGTTTC ]
[+] EMBL CD184047 [ tGATGAC GAATC GGAACAAG TAAAGTC GAAAGA GACTGAAC AATC TGATGACCT GCCGAAAGTCTAGAATCTCAATGAAGACGATGTAACACCAGAATAAGGAACAGAAGAAAAACAAGAAGGTAACGGATAATTGTACTGACGAACAACAGTTGAACAAGCTCAAGCCGGTCTGGACGCGCAATCCCCAAGATATAACTACATAAGAGTATGCACGAGTTTTACAAGTCGTTAGCTAGTGATTGGGAGGACCACCTTGCCGTGAAGCACTTTTCTGTAGAAGGTCAGTTAAAGTTCCCTGCATTGGTTTTTGTGCCTAAACGCGCACCAATTGATATGTGTGAAGGGACGCGGAAAAAGCGGAGCAACATTAAATTGTATGTGCGAAGAGTCCTCATCATGGATACCTGTGACGATATGATTCCCGAGTACTTGAGTTTC ]
[+] EMBL CD181146 [ GAAAAAGAAGAAGGTAACGGAGAAGTATACTGAGGAAGAACAGTTGAACAAGCTCAAGCCGCTCTGGACGCGCAATCCCGAAGATATAACTACAGAAGAGTATGCA GAGTTTTACAAGTCGTTAACTAATGATTGGGAGGACCACCTTGCAGTGAAGCACTTTTCTGTTGAAGGTCAGTTAGAGTTCCGTGCATTGCTTTTTGTGCCTAAACGCGCACCAATTGATATGTTTGAAGGGACGCGGAAAAAGCGGAGTAACATTAAATTGTATGTGCGAAGAGTCCTCATCATGGATACCTGTGAGGATATGATTCCCGAGTACTTGAGTTTCGTTCGCGGAGTTGTCGACAGCGAGGACCTGCCTCTTAACATCAGTCGTGAGGTGTTGCAACAGAACAACGTATTAAAGGTCATCCGTAAGAGCCTGGTCAGGAAATGTATTGAATTATTTGAAGAAGAATCCTTACCATTCACTGCCGA]
consensusID : consensus_10921#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 525 fasta sequence
[AATAATAATAATGATGATGATGATGGTGATTGTGGTGGTGTTATTTGCATGTGTCTGTGTGTATGCTGATAATGTTGGTAAGAAGATAGATGATGAATGAGAAGGCGACGGGCGAACTGAGAAATATGCAGTTGTGCTGATTCGCCGAGTTCTGATTTTGTGCAAACTAGTGTTGGGACTGTGATTGATTGTGTTTGACAAATTGTAATTGTATTTGGAGAAGAGATATTTACACTGTGTTTTAATGTGTTTTTGCTTTGTCAGGTGCGTGACCGAGCAAGCAAGCGTGTGGGTGAATGAATGTGTTGGTGAGTGCCGGATGGCGATGGGATGAGGAGTTGAGTAATCAACCGGGTGAGTGTGTGATTATATGCGTTGATGTGCATGTATGTGTTTTTCTATGTTTGAGTATATGATGTGTTACCTACATTGTGTAATCAGTTTGAAATGAACTGAAATGATGCTGAATAATGATAATGTTAATATTGGAGTTTGTTTTATTGTTGNTGNTGNTGNTGNTGNTGN]
[+] EMBL CD114956 [AATAATAATAATGATGATGATGATGGTGATTGTGGTGGTGTTATTTGCATGTGTCTGTGTGTATGCTGATAATGTTGGTAAGAAGATAGATGATGAATGAGAAGGCGACGGGCGAACTGAGAAATATGCAGTTGTGCTGATTCGCCGAGTTCTGATTTTGTGCAAACTAGTGTTGGGACTGTGATTGATTGTGTTTGACAAATTGTAATTGTATTTGGAGAAGAGATATTTACACTGTGTTTTAATGTGTTTTTGCTTTGTCAGGTGCGTGACCGAGCAAGCAAGCGTGTGGGTGAATGAATGTGTTGGTGAGTGCCGGATGGCGATGGGATGAGGAGTTGAGTAATCAACCGGGTGAGTGTGTGATTATATGCGTTGATGTGCATGTATGTGTTTTTCTATGTTTGAGTATATGATGTGTTACCTACATTGTGTAATCAGTTTGAAATGAACTGAAATGATGCTGAATAATGATAATGTTAATATTGGAGTTTGTTTTATTGTTGNTGNTGNTGNTGNTGNTGN]
consensusID : consensus_10921#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 316 fasta sequence
[AGCTATAACCCGACAGATTGGGGCCCAACAGACATACCAGAAGAGTTTAGAAACATGCCTTTTCAGCCATTTTCAAAGGATACCCGCCTAGGCAGAGTTGCAGATTGGTCAGGAAATATTTTTCAAGATATGAAAAACAAAGGTTTTATCTAAACTTTACCCTATGAAATTTTTAGGTCGCTATGTCTCCCAGTCTGTCGGTTCACAGTACGCTTACTATCATGACGAGGACGACAACAATTTCCAACTGGTTTCTTCCGTTCGTGAAACGAAAACTCCTGCTATTCGTCAAAGATATAGATTCCCTATGGTCAGT]
[+] EMBL CD069393 [AGCTATAACCCGACAGATTGGGGCCCAACAGACATACCAGAAGAGTTTAGAAACATGCCTTTTCAGCCATTTTCAAAGGATACCCGCCTAGGCAGAGTTGCAGATTGGTCAGGAAATATTTTTCAAGATATGAAAAACAAAGGTTTTATCTAAACTTTACCCTATGAAATTTTTAGGTCGCTATGTCTCCCAGTCTGTCGGTTCACAGTACGCTTACTATCATGACGAGGACGACAACAATTTCCAACTGGTTTCTTCCGTTCGTGAAACGAAAACTCCTGCTATTCGTCAAAGATATAGATTCCCTATGGTCAGT]
consensusID : consensus_10921#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 245 fasta sequence
[AAGATGTTCGGCGAGACATTGGGGTCTAGGTGAAGCGGACGCACAATGATGAAGCGGCTGAACAGGTTGCAATCGTGAACGTCGTGTCTGTGTTCGCTCCAGTCGAGATGGAAAAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTATTTGAAGGTGAGACGGAAGCCGAGTCGGCAGTCGAAGTGTTCGGTGAGACATTGGGGCAAGTTGAAGCGGACGCAGAAAGT]
[+] EMBL CD059434 [AAGATGTTCGGCGAGACATTGGGGTCTAGGTGAAGCGGACGCACAATGATGAAGCGGCTGAACAGGTTGCAATCGTGAACGTCGTGTCTGTGTTCGCTCCAGTCGAGATGGAAAAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTATTTGAAGGTGAGACGGAAGCCGAGTCGGCAGTCGAAGTGTTCGGTGAGACATTGGGGCAAGTTGAAGCGGACGCAGAAAGT]
consensusID : consensus_10921#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 89 fasta sequence
[CGCGCACCAATTGATATGACCGAAGGGACGCGCAAAAAGCGGAGCAACATTAAAATGTATGTGCGAAAAGTCCTAATGATGGATACCTG]
[+] EMBL AI976331 [CGCGCACCAATTGATATGACCGAAGGGACGCGCAAAAAGCGGAGCAACATTAAAATGTATGTGCGAAAAGTCCTAATGATGGATACCTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10921#1 ------------------------------------------------------------
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 ATGTCTTCGATGGATGGTGATCGTGGTGATTTCAATGACGATCATGATAGGGATGAGGGC 60
consensus_10921#4 ------------------------------------------------------------
consensus_10921#2 ------------------------------------------------------------
consensus_10921#3 ------------------------------------------------------------
consensus_10921#1 ------------------------------------------------------------
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 TTTCCAGACGAAGATCCTCCGTTTCAGTCAGAAAATACCTTTTCGGATGATGGGCGATAT 120
consensus_10921#4 ------------------------------------------------------------
consensus_10921#2 ------------------------------------------------------------
consensus_10921#3 ------------------------------------------------------------
consensus_10921#1 ------------------------------------------------------------
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 CAAGATGATATGCGGTACCCAGAGGATCGTTATCCAGATGATTCCCCTGTGCATAAACAT 180
consensus_10921#4 ------------------------------------------------------------
consensus_10921#2 ------------------------------------------------------------
consensus_10921#3 ------------------------------------------------------------
consensus_10921#1 ------------------------------------------------------------
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 GATGACCGTTACCCGGGACCCGGACCCCGTCATATGAGAATGATGAGGCCTCAATTTCGT 240
consensus_10921#4 ------------------------------------------------------------
consensus_10921#2 ------------------------------------------------------------
consensus_10921#3 ------------------------------------------------------------
consensus_10921#1 ------------------------------------------------------------
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 CCAAGATTCCAGGGTGGCTACAGGGGGCACCCACGAATGCAGATGCATGGTGGCGGTCGA 300
consensus_10921#4 ------------------------------------------------------------
consensus_10921#2 ------------------------------------------------------------
consensus_10921#3 ------------------------------------------------------------
consensus_10921#1 ------------------------------------------------------------
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 GGGAATTTCATGCGATCAGGAATGGGTCCACATCGTGGTCCCCAATATGATGGTTACGGT 360
consensus_10921#4 ------------------------------------------------------------
consensus_10921#2 ------------------------------------------------------------
consensus_10921#3 ------------------------------------------------------------
consensus_10921#1 ------------------------------------------------------------
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 CATCCTATGGGCATGAACCGAGGATATCCACCAAGATTTAGTCCACAGTATCCTGGACGT 420
consensus_10921#4 ------------------------------------------------------------
consensus_10921#2 ------------------------------------------------------------
consensus_10921#3 ------------------------------------------------------------
consensus_10921#1 ------------------------------------------------------------
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 TTTCAAGGCATAAGCGAAGACCAAATGGATGAGCAAATGGACGAAACACATCCTTCCGGC 480
consensus_10921#4 ------------------------------------------------------------
consensus_10921#2 ------------------------------------------------------------
consensus_10921#3 ------------------------------------------------------------
consensus_10921#1 ------------------------------------------------------------
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 GACATGAACTACCCAGGTCACGGGGATATGCCGATGCCCCCTAACGCGTATCCTAATATG 540
consensus_10921#4 ------------------------------------------------------------
consensus_10921#2 ------------------------------------------------------------
consensus_10921#3 ------------------------------------------------------------
consensus_10921#1 ------------------------------------------------------------
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 CAGCACATGCGCATGCGCGGTCCACCACCTCAATTCATGCCACCTAACAAACAGATGCCT 600
consensus_10921#4 ------------------------------------------------------------
consensus_10921#2 ------------------------------------------------------------
consensus_10921#3 ------------------------------------------------------------
consensus_10921#1 ------------------------------------------------------------
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 CCTGACCACCAACAACCAGGTGCTCTCCCACCGGGTTCTGGCGGGCACCAGCCCTATGGT 660
consensus_10921#4 ------------------------------------------------------------
consensus_10921#2 ------------------------------------------------------------
consensus_10921#3 ------------------------------------------------------------
consensus_10921#1 ------------------------------------------------------------
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 ACAAACAATTCGTTCAATAGTCCACCTGGGTCTCATTATGGTGGACCACAGGCACCTTAT 720
consensus_10921#4 ------------------------------------------------------------
consensus_10921#2 ------------------------------------------------------------
consensus_10921#3 ------------------------------------------------------------
consensus_10921#1 ------------------------------------------------------------
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 GGTGGACCTGGAGCTCCTTATTCCGGAAACCAAAACAATCAACCCTTCGGAGCTCCACCG 780
consensus_10921#4 ------------------------------------------------------------
consensus_10921#2 ------------------------------------------------------------
consensus_10921#3 ------------------------------------------------------------
consensus_10921#1 ------------------------------------CTAGATGACAGAATCTGTAACAAG 24
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 TTCAATGGCCCTCCTGTGTCTCAGTTCGGCGGTCCCCCATACAATGGT-CCTCCAGTGTC 839
consensus_10921#4 ------------------------------------------------------------
consensus_10921#2 ------------------------------------------------------------
consensus_10921#3 ------------------------------------------------------------
consensus_10921#1 ATAAA-GTCTGAAAGAGGACTGAACGAATCGTGATGAC-----CTCGCCCAAAGTCTAGA 78
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 ACAGATGGGTGATCCTGGTTCAAATCTACCATCAGGACAGCAGTTTGCTCCACCCACAAG 899
consensus_10921#4 ------------------------------------------------------------
consensus_10921#2 ------------------------------------------------------------
consensus_10921#3 ------------------------------------------------------------
consensus_10921#1 ATC--TCGATGAAGACGAGGTAACACCAGAATAAGGAAGAGAAGAAAAAGAAGAAGGTAA 136
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 GCCATTTGGAGCACCTCCCGCTGGCCCCTTTCCCGTTCCTCCAACCGCGCCTTATGGCGG 959
consensus_10921#4 ------------------------------------------------------------
consensus_10921#2 ------------------------------------------------------------
consensus_10921#3 ------------------------------------------------------------
consensus_10921#1 CGGATAATTGTACTGACGAACAACAGTTGAACAAGCTCAAGCCGGTCTGGACGCGCAATC 196
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 CCCAGGGCCCAACTCGCAACCCGCCG--GGTCTTACAATGGCCCTTCACAATTTGCTGGG 1017
consensus_10921#4 ------------------------------------------------------------
consensus_10921#2 -------------------AATAATAATAATGATGATGATGATGGTGATTGTGGTGGTGT 41
consensus_10921#3 ------------------------------------------------------------
consensus_10921#1 CCCAAGATATAACTACAGAAGAGTATGCAC--GAGTTTTACAAGTCGTTAGCTAGTGATT 254
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 GCTCCAACCGGACCTCAAAGTGCTTCGTCGCAGAGTTTTACAAGTCGTTAACTAATGATT 1077
consensus_10921#4 -----------------------------------------AAGATGTTCGGCGA-GACA 18
consensus_10921#2 TATTTGCATGTGTCTGTGTGTATGCTGATAATGTTGGTAAGAAGATAGATGATGAATGAG 101
consensus_10921#3 -----------------------------------AGCTATAACCCGACAGATTGGGGCC 25
consensus_10921#1 GGGAGGACCACCTTGCAGTGAAGCACTTTTCTGTAGAAGGTCAGTTAAAGTTCCGTGCAT 314
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 GGGAGGACCACCTTGCGGTGAAGCACTTTTCTGTTGAAGGTCAGTTAGAGTTCCGTGCAT 1137
consensus_10921#4 TTGGGGTCTAGGTGAAGCGGACGCACAATGATGAAGCGGCTGAAC--AGGTTGCAATCGT 76
consensus_10921#2 AAGGCGACGGGCGAACTGAGAAATATGCAGTTGTGCTGATTCGCCGAGTTCTGATTTTGT 161
consensus_10921#3 CAACAGACA---TACCAGAAGAGTTTAGAAACATGCCTTTTCAGCC-ATTTTCAAAGGAT 81
consensus_10921#1 TGGTTTTTGTGCCTAAACGCGCACCAATTGATATGTGTGAAGG-GACGCGGAAAAAGCGG 373
consensus_10921#5 -----------------CGCGCACCAATTGATATGACCGAAGG-GACGCGCAAAAAGCGG 42
consensus_10921#0 TGCTTTTTGTGCCTAAACGCGCACCAATTGATATGTTTGAAGG-GACGCGAAAAAAGCGG 1196
consensus_10921#4 -GAACGTCGTGTCTGTGTTCGCTCCAGTCGAGATGGAAAAGCGTGTCGGTGAGATGGAGG 135
consensus_10921#2 GCAAACTAGTGTTGGGACTGTGATTGATTGTGTTTGACAAATTGTAATTGTATTTGGAGA 221
consensus_10921#3 ACCCGCCTAGGCAGAGTTGCAGATTGGTCAGGAAATATTTTTCAAGATATGAAAAACAAA 141
* *
consensus_10921#1 AGCAACATTAAATTGTATGTGCGAAGAGTCCTCA---TCATGGATACCTGTGAGGATATG 430
consensus_10921#5 AGCAACATTAAAATGTATGTGCGAAAAGTCCTAA---TGATGGATACCTG---------- 89
consensus_10921#0 AGCAACATTAAATTGTATGTGCGAAGAGTCCTCA---TCATGGATACCTGTGAGGATATG 1253
consensus_10921#4 CGGAATATGGTGAAGTTGGTG-AAGGCGTATTTG---AAGGTGAGACGGAAGCCGAGTCG 191
consensus_10921#2 AGAGATATTTACACTGTGTTTTAATGTGTTTTTGCTTTGTCAGGTGCGTGA-CCGAGCAA 280
consensus_10921#3 GGTTTTATCTAAACTTTACCCTATGAAATTTTTAGGTCGCTATGTCTCCCAGTCTGTCGG 201
* ** * *
consensus_10921#1 ATTCCCGAGTACTTGAGTTTCGTTCGCGGAGTTGTCGACAGCGAGGACCTGCCTCTTAAC 490
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 ATTCCCGAGTACTTGAGTTTCGTTCGCGGAGTTGTCGACAGCGAGGACCTGCCTCTTAAC 1313
consensus_10921#4 GCAGTCGAAGTGTTCGGTGAGACATTGGGGCAAGTTGAAGCGGACGCAGAAAGT------ 245
consensus_10921#2 GCAAGCGTGTGGGTGAATGA-ATGTGTTGGTGAGTGCCGGATGGCGATGGGATGAGGAGT 339
consensus_10921#3 TTCACAGTACGCTTACTATCATGACGAGGACGACAACAATTTCCAACTGGTTTCTTCCGT 261
consensus_10921#1 ATCAGTCGTGAGGTGTTGCAACAGAAC-AACGTATTAAAGGTCATCCGTAAGAGCCTGG- 548
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 ATCAGTCGTGAGGAGTTGTCTGATGACGAATCTGTAAAAGTAGAGTCGAAAGAGACTGAA 1373
consensus_10921#4 ------------------------------------------------------------
consensus_10921#2 TGAGTAATCAACCGGGTGAGTGTGTGATTATATGCGTTGATGTGCATGTATGTGTTTTTC 399
consensus_10921#3 TCGTGAAACGAAAACTCCTGCTATTCGTCAAAGATATAGATTCCCTATGGTCAGT----- 316
consensus_10921#1 ---TCAGGAAATGTATTGAATTATTTGAAGAAGAATCCTTACCATTCACTGCCGA----- 600
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 GAATCTGATGACAAGCCGAA--AGTCGAAGATCTAGATGAAGACTAGGAAGACGAGAATA 1431
consensus_10921#4 ------------------------------------------------------------
consensus_10921#2 TATGTTTGAGTATATGATGTGTTACCTACATTGTGTAATCAGTTTGAAATGAACTGAAAT 459
consensus_10921#3 ------------------------------------------------------------
consensus_10921#1 ------------------------------------------------------------
consensus_10921#5 ------------------------------------------------------------
consensus_10921#0 AGGAAAAGAAGAAAAAGAAGAAGGTAACGGAGAAGTATACTGAGGAAGAACAGTTGAACA 1491
consensus_10921#4 ------------------------------------------------------------
consensus_10921#2 GATGCTGAATAATGATAATGTTAATATTGGAGTTTGTTTTATTGTTGNTGNTGNTGNTGN 519
consensus_10921#3 ------------------------------------------------------------
consensus_10921#1 ----------
consensus_10921#5 ----------
consensus_10921#0 AGCTCAAGCC 1501
consensus_10921#4 ----------
consensus_10921#2 TGNTGN---- 525
consensus_10921#3 ----------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||