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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10941#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1426 fasta sequence
[AGAAGAAGCGGAAGAAGAAGAAGAAGCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGAAGAAGAAGCGGAAGAAGAAGAAGAAGCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGAAGAAGAAGAAGAAGAAGCGGAAGAAGAAGAAGAAGAAGAAGCGGAAGAAGAACAACAAGAAGAAGAATCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGAAGAACAACAAGAGGAAGAATCGGAAGAAGAACAAAAAGAAGAAGAAGCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGAAGAAAAATTGAAAGAAGCGGAAGATGAAGGACAAGAGTAAACCAAATAGTAAAGATATATCAACTAGATAATATAATATATTATGTAATCATAATAATAAATATTCAATTATATTCCAAAAAGGAAAAGAAAAGTTGAAATAGTCAGATAAATGATATGACATATTAATAATAGTAATGGTAATATATGAATTT-CCAAAGAAATAGTTGAATCTGTCTATCTATATTAGTTGATTACATATAGAGTGCACTGTTTACAAATTCACTTTCAGTAAATAATGCTTGTAATTGATCATTTTTAGGTGTTGCTTTAAATACTTCAAATAAGATTTGTAAACGTGCACAACATATTACATAACTATCAAATGGTACACTACCATCACGACGTGAAAAACGTAATACCAATGTAGAAAATGTTGCATTATTAATGGAAAAACCAACATG-TTTCAATGCA-TTTCTTAA-TTCAATCGAATTCATTGAACCACTTTTATCCGTATCAAATTGTTTAAATGCAGACTTCCATACACGTAACAGATCCCATAATTTTCGAAATTCTGAAAAGTTTAACATACCAGAACGATCGACATCCATCATAGCAATCATACTTCTACACGATTCCAAACTGAATCCATCAAAAGTAAAATCTCGTGTAAATGCACAATTCAATATATCACGTAATTCATCTGCATCAATTTCACCATCATCACCAGCGACTTTATTGAATGCTTTCTGTAATGCTTCTACTTGTACATCAGTCAATGGTTTGACAACAGTCTACAATATCAATATCCAGATAGATACACAAAATAAAAAGATGTAAATGGATACAATATCCATTAAGAAAAGAATACAATTGTATAAGTCAATCACATTCATAGGAACACACACACACACAGAGCGAGAGACAGAAAGGGAAAGGGAGAATAGAAACCA-TATTCACACAAATCAGAGCATCATTTTATACGATTCATTAGTTGTCTACTGAAAAACCAGATTGGTAGTAGTTGCTGCATAACTTATTATATTGAATACAATCAATTGAATCACAAGTGACATAACACATCAATCAATGAAAAAGTAAACAATCATCATGCGATAGATGTCTAGTTTATCCCTATTCATAG]
[+] EMBL CD169071 [AGAAGAAGCGGAAGAAGAAGAAGAAGCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGAAGAAGAAGCGGAAGAAGAAGAAGAAGCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGAAGAAGAAGAAGAAGAAGCGGAAGAAGAAGAAGAAGAAGAAGCGGAAGAAGAACAACAAGAAGAAGAATCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGAAGAACAACAAGAGGAAGAATCGGAAGAAGAACAAAAAGAAGAAGAAGCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGAAGAAAAATTGAAAGAAGCGGAAGATGAAGGACAAGAGTAAACCAAATAGTAAAGATATATCAACTAGATAATATAATATATTATGTAATCATAATAATAAATATTCAATTATATTCCAAAAAGGAAAAGAAAAGTTGAAATAGTCAGATAAATGATATGACATATTAATAATAGTAATGGTAATATATGAATTT CCAAAGAAATAGTTGAATCTGTCTATCTATATTAGTTGATTACATATAGAGTGCACTGTTTACAAATTCACTTTCAGTAAATAATGCTTGGTATTGATCATTTTTAGGTGTTGC ]
[+] EMBL CD169685 [ AGAAGCGGAAGAAGAACAACAAGAAGAAGAATCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGAAGAACAACAAGAGGAAGAATCGGAAGAAGAACAAAAAGAAGAAGAAGCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGAAGAAAAATAGAAAGAAGCGGAAGATGAAGGACAAGAGTAAACCAAATAGTAAAGATATATCAACTAGATAATATAATATATTATGTAATCATAATAATAAATATTCAATTATATTCCAAAAAGGAAAAGAAAAGTTGAAATAGTCAGATAAATGATATGACATATTAATAATAGTAATGGTAATATATGAATTT CCAAAGAAATAGTTGAATCTGTCTATCTATATTAGTTGATTACATATAGAGTGCACTGTTTACAAATTCACTTTCAGTAAATAATGCTTGTAATTGATCATTTTTAGGTGTTGCTTTAAATACTTCAAATAAGATTTGTAAACGTGCACAACATATTACATAACTATCAAATGGTACACTACCATCACGACGTGAAAAACGTAATACCAATGTAGAAAATGTTGCATTATTAATGGAAAAACCAACATG TTTCAATGCA TTTCTTAA TTCAATCGAATTCATTGAACCACTTTTATCCGTATCAAATT ]
[+] EMBL CD169709 [ AGAAGCGGAAGAAGAACAACAAGAAGAAGAATCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGAAGAACAACAAGAGGAAGAATCGGAAGAAGAACAAAAAGAAGAAGAAGCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGAAGAAAAATTGAAAGAAGCGGAAGATGAAGGACAAGAGTAAACCAAATAGTAAAGATATATCAACTAGATAATATAATATATTATGTAATCATAATAATAAATATTCAATTATATTCCAAAAAGGAAAAGAAAAGTTGAAATAGTCAGATAAATGATATGACATATTAATAATAGTAATGGTAATATATGAATTT CCAAAGAAATAGTTGAATCTGTCTATCTATATTAGTTGATTACATATAGAGTGCACTGTTTACAAATTCACTTTCAGTAAATAATGCTTGTAATTGATCATTTTTAGGTGTTGCTTTAAATACTTCAAATAAGATTTGTAAACGTGCACAACATATTACATAACTATCAAATGGTACACTACCATCACGACGTGAAAAACG ]
[+] EMBL CD069286 [ AACAACAAGAAGAAGAATCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGAAGAACAACAAGAGGAAGACTCGGAAGAAGAACAAAAAGAAGAAGAAGCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGAAGAACAATTGAAAGAAGCGGAAGATGAAGGACAAGAGTAAACCAAATAGTAAAGATATACCAACTAGATAATATAATATATTATGTAATCATAATAATAAATATTCAATTATATTCCAAAAAGGAAAAGAAAAGTTGAAATAGTCAGATAAATGATATGACATATTAATAATAGTAATGGTAATATATGAATTT CCAAAGAAATAGTTGAATCTGTCTATCTATACTAGTTGATTACATATAGAGTGCACTGTTTACAAATTCACTTTCAGTAAATAATGCTTGTAATTGATCATTTTTAGGTGTTGCTTTAAATACTTCAAATAAGATTTGTAAACGTGCACA ]
[+] EMBL CD140393 [ GAAGAAGAACAAAAAGAAGAAGAAGCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGAAGAAAAATTGAAAGAAGCGGAAGATGAAGGACAAGAGTAAACCAAATAGTAAAGATATATCAACTAGATAATATAATATATTATGTAATCATAATAATAAATATTCAATTATATTCCAAAAAGGAAAAGAAAAGTTGAAATAGTCAGATAAATGATATGACATATTAATAATAGTAATGGTAATATATGAATTT CCAAAGAAATAGTTGAATCTGTCTATCTATATTAGTTGATTACATATAGAGTGCACTGTTTACAAATTCACTTTCAGTAAATAATGCTTGTAATTGATCATTTTTAGGTGTTGCTTTAAATACTTCAAATAAGATTTGTAAACGTGCAC ]
[+] EMBL CD067503 [ ggggGAAGAACAAAAAGAAGAAGAAGCGGAAGAAGAACAATCGGAAGAAGAAGCGGAAGAATAAAAATTGAAAGAAGCGGAAGATGAAGGACATGAGTAAACCAAATAGTAAAGATATATCAACTAGATAATATAATATATTATGTAATCATAATAATAAATATTCAATTATATTCCAAAAAGGAAAAGAAAAGTTGAAATAGTCATATAAATGATAT ]
[+] EMBL CD066818 [ AAAAGAAGAAGAAGCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGAAGAAAAATTGAAAGAAGCGGAAGATGAAGGACAAGAGTAAACCAAATAGTAAAGATATATCAACCAGATAATATAATATATTATGTAATCATAATAATAAATATTCAATTATATTCCAAAAAGGAAAAGAAAAGGTGAAATAGTCAGATAAATGATATG ]
[+] EMBL CD066703 [ AAAAGAAGAAGAAGCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGAAGAAAAATTGAAAGAAGCGGAAGATGAAGGACAAGAGTAAACCAAATAGTAAAGATATATCAACCAGATAATATAATATATTATGTAATCATAATAATAAATATTCAATTATATTCCAAAAAGGAAAAGAAAAGTTGAAATAGTCAGATAAATGATATGACATATTAATAATAGTAATAGTAATATATGAATTT CCAAAGAAATAGTTGAATCTGTCTATCTATATTAGTTGATTACATATAGAGTGCACTGTTTACAAATTCACTTCCAGT ]
[+] EMBL CD066704 [ AAAAGAAAAAAAAGCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGAAGAAAAATTGAAAGAAGCGGAAGATGAAGGACAAGAGTAAACCAAATAGTAAAGATATATCAACCAGATAATATAATATATTATGTAATCATAATAATAAATATTCAATTATATTCCAAAAAGGAAAAGAAAAGTTGAAATAGTCAGATAAATGATATGACATATTAATAATAGTAATAGTAATATATGAATTT CCAAAGAAATAGTTGAATCTGTCTATCTATATTAGTTGATTACATATAGAGTGCACTGTTTACAAATTCACTTCCAGTAAATAATGCTTGTAATTGATCATTTTTAGGTGTTGCTTTAAATACTTCAAATAAGATTTGTAAACGTGCACA ]
[+] EMBL CD067060 [ ATAGTAAAGATATATCAACTAGATAATATAATATATTATGTAATCATAATAATAAATATTCAATTATATTCCAAAAAGGAAAAGAAAAGTTGAAATAGTCAGATAAATGATATGACATATTAATAATAGTAATGGTAATATATGAATTT CCAAAGAAATAGTTGAATCTGTCTATCTATATTAGTTGATTACATATAGAGTGCACTGTTTACAAATTCACTTTCAGTAAATAATGCTTGTAATTGATCATTTTTAGGTGTTGCTTTAAATACTTCAAATAAGATTTGTAAACGTGCACAACATATTACATAACTATCAAATGGTACACTACCATCACGACGTGAAAAACGTAATACCAATGTAGAAAATGTTGCATTATTAATGGAAAAACCAACATG TTTCAATGCA TTTCTTAA TTCAATCGAATTCATTGAACCACTTTTATCCGTATCAAATTGTTTAAATGCAGACTTCCATACACGTAACAGA ]
[-] EMBL AA559719 [ TGAATTTCCCAAAGAAATAGNTGAATCTGTCTATCTATATTAGTTGATTACATATAGAGTGCACTGTTTACAAATTCACTTTCAGTAAATAATGNTTGTAATTGATCATTTTTAGGTGTTGCTTTAAATACTTCAAATAAGATTTGTAAACGTGCACAACATATTACATAACTATCAAATGGTACACTACCATCACGACGTGNAAAACGTAATACCNATGTAGNAAATGTTGCATTATTAATGGNAAAACCAACATGTTTTCAATGCATTTTCTTAATTTCAATCGAATTCATTGAACCACTT ]
[-] EMBL CD169182 [ TAA TTCAATCGAATTCATTGAACCACTTTTATCCGTATCAAATTGTTTAAATGCAGACTTCCATACACGTAACAGATCCCATAATTTTCGAAATTCTGAAAAGTTTAACATACCAGAACGATCGACATCCATCATAGCAATCATACTTCTACACGATTCCAAACTGAATCCATCAAAAGTAAAATCTCGTGTAAATGCACAATTCAATATATCACGTAATTCATCTGCATCAATTTCACCATCATCACCGGCGACTTTATTGAATGCTTTCTGTAATGCTTCTACTTGTACATCAGTCAATGGTTTGACAACAGTCTACAATATCAATATCCAGATAGATACACAAAATAAAAAGATGTAAATGGATACAATATCCATTAAGAAAAGAATACAATTGTATAAGTCAATCACATTCATAGGAACACACACACACACAGAGCGAGAGACAGAAAGGGAAAGGGAGAATAGAAACCA TATTCACACAAATCAGAGCATCATTTTATACGATTCATTAGTTGTCTACTGAAAAACCAGATTGGTAGTAGTTGCTGCATAACTTATTATATTGAATACAATCAATTGAATCACAAGTGACATAACACATCAATCAATGAAAAAGTAAACAATCATCATGCGATAGATGTCTAGTTTATCCCTATTCATgg]
[-] EMBL CD169016 [ AACCACTTTTATCCGTATCAAATTGTTTAAATGCAGACTTCCATACACGTAACAGATCCCATAATTTTCGAAATTCTGAAAAGTTTAACATACCAGAACGATCGACATCCATCATAGCAATCATACTTCTACACGATTCCAAACTGAATCCATCAAAAGTAAAATCTCGTGTAAATGCACAATTCAATATATCACGTAATTCATCTGCATCAATTTCACCATCATCACCAGCGACTTTATTGAATGCTTTCTGTAATGCTTCTACTTGTACATCAGTCAATGGTTTGACAACAGTCTACAATATCAATATCCAGATAGATACACAAAATAAAAAGATGTAAATGGATACAATATCCATTAAGAAAAGAATACAATTGTATAAGTCAATCACATTCATAGGAACACACACACACACAGAGCGAGAGACAGAAAGGGAAAGGGAGAATAGAAACCA TATTCACACAAATCAGAGCATCATTTTATACGATTCATTAGTTGTCTACTGAAAAACCAGATTGGTAGTAGTTGCTGCATAACTTATTATATTGAATACAATCAATTGAATCACAAGTGACATAACACATCAATCAATGAAAAAGTAAACAATCATCATGCGATAGATGTCTAGTTTATCCCTATTCATA ]
[-] EMBL CD169201 [ TGTTTAAATGCAGACTTCCATACACGTAACAGATCCCATAATTTTCGAAATTCTGAAAAGTTTAACATACCAGAACGATCGACATCCATCATAGCAATCATACTTCTACACGATTCCAAACTGAATCCATCAAAAGTAAAATCTCGTGTAAATGCACAATTCAATATATCACGTAATTCATCTGCATCAATTTCACCATCATCACCAGCGACTTTATTGAATGCTTTCTGTAATGCTTCTACTTGTACATCAGTCAATGGTTTGACAACAGTCTACAATATCAATATCCAGATAGATACACAAAATAAAAAGATGTAAATGGATACAATATCCATTAAGAAAAGAATACAATTGTATAAGTCAATCACATTCATAGGAACACACACACACACAGAGCGAGAGACAGAAAGGGAAAGGGAGAATAGAAACCA TATTCACACAAATCAGAGCATCATTTTATACGATTCATTAGTTGTCTACTGAAAAACCAGATTGGTAGTAGTTGCTGCATAACTTATTATATTGAATACAATCAATTGAATCACAAGTGACATAACACATCAATCAATGAAAAAGTAAACAATCATCATGCGATAGATGTCTAGTTTATCCCTATTCATA ]
[-] EMBL CD169183 [ ATCAGTCAATGGTTTGACAACAGTCTACAATATCAATATCCAGATAGGTACACAAAATAAAAAGATGTAAATGGATACAATATCCATTAAGAAAAGAATACAATTGTATAAGTCAATCGCATTCATAGGAACACACACACGGGCAGAGCGAGAGACAGAAAGGGAAAGGGAGGATACATACAACCCTTCAAAAAAATCAGAGCATCGTTTTATACGATTCATTAGTTGTCTACTGAAAAACCAGATTGGTAGTAGTTGCTGCATAACTTATTATATTGAATACAATCAATTGAATCCCCCCCCCCATAGCACATCAATCAATGAAAAAG ]
consensusID : consensus_10941#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1034 fasta sequence
[GGAAAAACCAACATGTTTCAACGCATTTCTAAATTCAATCGAATTCATTGAACCACTTTTATCCGTATCAAATTGTTTAAATGCAGACTTCCATACACGTAACAGATCCCATAATTTTCGAAATTCTGAAAAGTTTAACGTACCAGAACGATCGACATCCATCATAGCAATCATACTTCTACACGATTCCAAACTGAATCCATCAAAAGTAAAATCTCGTGTAAATGCACAATTCAATATATCACGTAATTCATCTGCATCAATTTCACCATCATCACCAGCGACTTTATTGAATGCTTTCTGTAATGCTTCTACTTGTACATCAGTCAATGGTTTGACAACAGTATTATCATCCAAATTGAGTGTCGGTTCCGTTTCACCGATCTCTTCATCTAATTCTTGAGTTGTACGCGGTTTTTCTGAGAATATACGCAGCATAAAATCAGCCTCTTCATTTGGTTGAAATGTTGACGGGATAATTGCATATCGTCCTGTATCTAATCTATGTCGACCACATACTTCACGTAAATTGATAAATGCTGGTGAACGTGCAACTGATGCATTGTATTTGAAAAATTTCATATCCAATGTACCTTGTTGTTGTTCCGGTAATTTATAAATAGCATAACCAATAGTTAGTAGATCAGCACCTTCTCGTCTCATTTTTCTTCTATTCTTTTGCATTAAACCAACAATTAATGTTCCTTTATTTTCATCATCATCTTCATCTGGATCTTCAACAGTTACTACATATTGTGGATTTATCCAAAATGTATCAAGAAAATTACGACATCCACCGGCTGATACAGAGT-GCTG-CAACAACCTTCTTCAATACACATTTCCCAAACACGATTTCCGTCCATTTCACCCATAGACTGTGGTCCAAGATGACATATTTCAAGTTTTTCATAGTTTGATATAAAATCCTGATAAGACATCCAAAATTCACCATCATCATCAAATGTTAAACCAAGTTGTTGCCTTTGTTCTGGTGACTCGTGGAAATGTCCACAGTGACTCGTGGGTGACTCGTG]
[-] EMBL CD140360 [GGAAAAACCAACATGTTTCAACGCATTTCTAAATTCAATCGAATTCATTGAACCACTTTTATCCGTATCAAATTGTTTAAATGCAGACTTCCATACACGTAACAGATCCCATAATTTTCGAAATTCTGAAAAGTTTAACGTACCAGAACGATCGACATCCATCATAGCAATCATACTTCTACACGATTCCAAACTGAATCCATCAAAAGTAAAATCTCGTGTAAATGCACAATTCAATATACCACGTAATTCATCTGCATCAATTTCACCATCATCACCAGCGACTTTATTGAATGCTTTCTGTAATGCTTCTACTTGTACATCAGTCAATGGTTTGACAACAGTATTATCATCCAAATTGAGTGTCGGTTCCGTTTCACCGATCTCTTCATCTAATTCTTGAGTTGTACGCGGTTTTTCTGAGAATATACGCAGCAT ]
[-] EMBL CD129847 [ TCGAATTCATTGAACCACTTTTATCCGTATCAAATTGTTTAAATGCAGACTTCCATACACGTAACAGATCCCATAATNTTCGAAATTCTGAAAAGTTTAACATACCAGAACGATCGACATCCATCATAGCAATCATACTTCTACACGATTCCAAACTGAATCCATCAAAAGTAAAATCTCGTGTAAATGCACAATTCAATATATCACGTAATTCATCTGCATCAATTTCACCATCATCACCAGCGACTTTATTGAATGCTTTCTGTAATGCTTCTACTTGTACATCAGTCAATGGTTTGACAACAGTATTATCATCCAAATTGAGTGTCGGTTCCGTTTCACCGATCTCTTCATCTAATTCTTGAGTTGTACGCGGTTTTTCTGAGAATATACGCAGCATAAAATCAGCCTCTTCATTTGGTTGAAATGTTGACGGGATAATTGCATATCGTCCTGTATCTAATCTATGTCGACCACATACTTCACGTAAATTGATAAATGCTGGTGAACGTGCAACTGATGCATTGTATTTGAAAAATTTCATATCCAATGTACCTTGTTGTTGTTCCGGTAATTTATAAATAGCATAACCAATAGTTAGTAGATCAGCACCTTCTCGTCTCATTT ]
[+] EMBL CD192041 [ AATCATACTTCTACACGATTCCAAACTGAATCCATCAAAAGTAAAATCTCGTGTAAATGCACAATTCAATATATCACGTAATTCATCTGCGTCAATTTCACCATCATCACCAGCGACTTTATTGAATGCTTTCTGTAATGCTTCTACTTGTACATCAGTCAATGGTTTGACAACAGTATTATCATCCAAATTGAGTGTCGG ]
[-] EMBL CD192831 [ ATCATACTTCTACACGATTCCAAACTGAATCCATCAAAAGTAAAATCTCGTGTAAATGCACAATTCAATATATCACGTAATTCATCTGCATCAATTTCACCATCATCACCAGCGACTTTATTGAATGCTTTCTGTAATGCTTCTACTTGTACATCAGTCAATGGTTTGACAACAGTATTATCATCCAAATTGAGTGTCGGT ]
[-] EMBL CD192823 [ ATCATACTTCTACACGATTCCAAACTGAATCCATCAAAAGTAAAATCTGGTGTAAATGCACAATTCAATATATCACGTAATTCATATGCATCAATTTCACCATCATCACCAGCGACTTTATTGAATGCTATATGTAATGCTTAAACTTGTACATCAGT ]
[-] EMBL CD067376 [ AAAAGTAAAATCTCGTGTAAATGCACAATTCAATATATCACGTAATTCATCTGCATCAATTTCACCATCATCACCAGCGACTTTATTGAATGCTTTCTGTAATGCTTCTACTTGTACATCAGTCAATGGTTTGACAACAGTATTATCATCCAAATTGAGTGTCGGTTCCGTTTCACCGATCTCTTCATCTAATTCTTGAGTTGTACGCGGTTTTTCTGAGAATATACGCAGCATAAAATCAGCCTCTTCATTTGGTTGAAATGTTGACGGGATAAT ]
[-] EMBL CD067191 [ TGCATATCGTCCTGTATCTAATCTATGTCGACCACATACTTCACGTAAATTGATAAATGCTGGTGAACGTGCAACTGATGCATTGTATTTGAAAAATTTCATATCCAATGTACCTTGTTGTTGTTCCGGTAATTTATAAATAGCATAACCAATAGTTAGTAGATCAGCACCTTCTCGTCTCATTTTTCTTCTATTCTTTTGCATTAAACCAACAATTAATGTTCCTTTATTTTCATCATCATCTTCATCTGGATCTTCAACAGTTACTACATATTGTGGATTTATCCAAAATGTATCAAGAAAATTACGACATCCACCGGCTGATACA CGTCGCTGCCAACAACCTTCTTCAATACACATTTCCCAAACGCGATTTCCGTCCATTTCACCCATAGACTGTGGTCCAAGATGACATATTTCAAGTTTCTCATAGTTT ]
[+] EMBL CD167709 [ tcacGAGT GCTG CAACAACCTTCTTCAATA ACATTTCCCAAACACGATTTCCGTCCATTTCACCCATAGACTGTGGTCCAAGATGACATATTTCAAGTTTTTCATAGTTTGATATAAAATCCTGATAAGACATCCAAAATTCACCATCATCATCAAATGTTAAACCAAGTTGTTGC ]
[+] EMBL CD068599 [ GAGT GCTG CAAC ACCTTCTTC ATACACATTTCCCAAACACGATTTCCGTCCATTTCACCCATAGACTGTGGTCCAAGATGACATATTTCAAGTTTTTCATAGTTTGATATAAAATCCTGATAAGACATCCAAAATTCACCATCATCATCAAATGTTAAACCAAGTTGTTGCCTTTGTTCTGGTGACTCGTGGAAATGTCCACAGTGACTCGTGGGTGACTCGTG]
consensusID : consensus_10941#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 393 fasta sequence
[AACCACTTTTATCCGTATCAAATTGTTTAAATGCAGACTTCCATACACGTAACAGATCCCATAATTTTCG-AAATTCTGAAAAGTTTAACATACCAGAACGATCGACATCCATCATAGCAATCATACTTCTACACGATTCCAAACTGAATCCATCAAAAGTAAAAT-CTCGTGTAAATGCACAATTCAATATATCACGTAATTCATCTGCATCAATTTCACCATCATCACCAGCGACTTTATTGAATGCTTTCTGTAATGCTTCTACTTGTACATCAGTCAATGGTTTGACAACAGTTGTCGGTTCCGTTTCACCGATCTCTTCATCTAATTCTTGAGTTGTACGCGGTTTTTCTGAGAATATACGCAGCATAAAATCAGCCTCGTTGTGATTTG]
[-] EMBL CD196769 [AACCACTTTTATCCGTATCAAATTGTTTAAATGCAGACTTCCATACACGTAACAGATCCCATAATTTTCG AAATTCTGAAAAGTTTAACATACCAGAACGATCGACATCCATCATAGCAATCATACTTCTACACGATTCCAAACTGAATCCATCAAAAGTAAAAT CTCGTGTAAATGCACAATTCAATATATCACGTAATTCATCTGCATCAATTTCACCATCATCACCAGCGACTTTATTGAATGCTTTCTGTAATGCTTCTACTTGTACATCAGTCAATGGTTTGACAACAGTTGTCGGTTCCGTTTCACCGATCTCTTCATCTAATTCTTGAGTTGTACGCGGTTTTTCTGAGAATATACGCAGCATAAAATCAGCCTCGTTGTGATTTG]
[-] EMBL CD069071 [ aacATTGTTTAAATGCAGACTTCCATACACGTAACAGATCCCATAATTTTCGCAAATTCTGAAAAGTTTAACATACCAGAACGATCGACATCCATCATAGCAATCATACTTCTACACGATTCC AACTGAATCCATCAAGAGTAAAATACTCGTGTAAATGCAC ATTCAATA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10941#1 ------------------------------------------------------------
consensus_10941#2 ------------------------------------------------------------
consensus_10941#0 AGAAGAAGCGGAAGAAGAAGAAGAAGCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGA 60
consensus_10941#1 ------------------------------------------------------------
consensus_10941#2 ------------------------------------------------------------
consensus_10941#0 AGAAGAAGCGGAAGAAGAAGAAGAAGCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGA 120
consensus_10941#1 ------------------------------------------------------------
consensus_10941#2 ------------------------------------------------------------
consensus_10941#0 AGAAGAAGAAGAAGAAGCGGAAGAAGAAGAAGAAGAAGAAGCGGAAGAAGAACAACAAGA 180
consensus_10941#1 ------------------------------------------------------------
consensus_10941#2 ------------------------------------------------------------
consensus_10941#0 AGAAGAATCGGAAGAAGAACAACAAGAAGAAGAAGCGGAAGAAGAACAACAAGAGGAAGA 240
consensus_10941#1 ------------------------------------------------------------
consensus_10941#2 ------------------------------------------------------------
consensus_10941#0 ATCGGAAGAAGAACAAAAAGAAGAAGAAGCGGAAGAAGAACAACAAGAAGAAGAAGCGGA 300
consensus_10941#1 ------------GGAAAAACCAACATGTTTCAACGCATTTCTAAATTCAATCGAATTCAT 48
consensus_10941#2 ------------------------------------------------------------
consensus_10941#0 AGAAGAAAAATTGAAAGAAGCGG-AAGATGAAGGACAAGAGTAAACCAAATAGTAAAGAT 359
consensus_10941#1 TGAACCACTTTTATCCGTATCAAATTGTTTAAATGCAGACTTCCATACACGTAACAGATC 108
consensus_10941#2 --AACCACTTTTATCCGTATCAAATTGTTTAAATGCAGACTTCCATACACGTAACAGATC 58
consensus_10941#0 ATATCAACTAGATAATATAATATATTATGTAATCATAATAATAAATATTCA-ATTATATT 418
* * *** ** * *** * *** * * *** * * * **
consensus_10941#1 CCATAATTTTC--GAAATTCTGAAAAGTTTAACGTACCAGAACGATCGACATCCATCATA 166
consensus_10941#2 CCATAATTTTC--GAAATTCTGAAAAGTTTAACATACCAGAACGATCGACATCCATCATA 116
consensus_10941#0 CCAAAAAGGAAAAGAAAAGTTGAAATAGTCAGATAAATGATATGAC--ATATTAATAATA 476
*** ** **** ***** * * * * ** * ** ** ***
consensus_10941#1 GCAATCATACTTCTACACGATTCCAAA-------CTGAATCCATCAAAAGTAAAATCTCG 219
consensus_10941#2 GCAATCATACTTCTACACGATTCCAAA-------CTGAATCCATCAAAAGTAAAATCTCG 169
consensus_10941#0 GTAATGGTAATA-TATGAATTTCCAAAGAAATAGTTGAATCTGTCTATCTATATTAGTTG 535
* *** ** * ** ******* ****** ** * * * *
consensus_10941#1 TGTAAATGCACAATTCAATATATCACGTAATTCATCTGCATCAATTTCACCATCATCACC 279
consensus_10941#2 TGTAAATGCACAATTCAATATATCACGTAATTCATCTGCATCAATTTCACCATCATCACC 229
consensus_10941#0 ATTACATATAGAGTGCACTGT-TTACA-AATTCACTTTCAGTAAATA-ATGCTTGTAATT 592
** ** * * * ** * * * ** ****** * ** ** * * * * *
consensus_10941#1 AGCGACTTTATTGAATGCTTTCTGTAATGCTTCTACTTGTACATCAGTCAATGGTTTGAC 339
consensus_10941#2 AGCGACTTTATTGAATGCTTTCTGTAATGCTTCTACTTGTACATCAGTCAATGGTTTGAC 289
consensus_10941#0 GATCATTTT--TAGGTGTTGCTTTAAATACTTCAAAT--AAGATTTGTAAACGTGCACAA 648
* *** * ** * * *** **** * * * ** ** ** * *
consensus_10941#1 AACAGTAT-TATCATCCAAATTGAGTGTCGGTTCCGTTTCACCGATCTCTTCAT-CTAAT 397
consensus_10941#2 AACAGT-------------------TGTCGGTTCCGTTTCACCGATCTCTTCAT-CTAAT 329
consensus_10941#0 CATATTACATAACTATCAAATGGTACACTACCATCACGACGTGAAAAACGTAATACCAAT 708
* * * * * * * * ** * ***
consensus_10941#1 TCTTGAGTTGTACGCGGTTTTTCTGAGAATATACGCAGCATAAAATCAGCCTCTTCATTT 457
consensus_10941#2 TCTTGAGTTGTACGCGGTTTTTCTGAGAATATACGCAGCATAAAATCAGCCTCGTTGT-- 387
consensus_10941#0 GTAGAAAATGT-TGCATTATTAATGGAAAAACCAACATGTTTCAATGCATTTCTTAATTC 767
* *** ** * ** ** ** * ** * *** ** * *
consensus_10941#1 GGTTGAAAT-GTTGACGGGATAAT-TGCATATCGTCCTGTAT-----CTAATCTATGTCG 510
consensus_10941#2 GATTTG------------------------------------------------------ 393
consensus_10941#0 AATCGAATTCATTGAACCACTTTTATCCGTATCAAATTGTTTAAATGCAGACTTCCATAC 827
*
consensus_10941#1 ACCACATACTTCACGTAAATTGATAAATGCTGGTGAACGTGCAACTGATGCATTGTATTT 570
consensus_10941#2 ------------------------------------------------------------
consensus_10941#0 ACGTAACAGATCCCATAATTTTCGAAATTCTGA--AAAGTTTAACATAC-CAGAACGATC 884
consensus_10941#1 GAAAAATTTCATATCCAATGTACCTTGTTGTTGTTCCGGT---AATTTATAAATAGCATA 627
consensus_10941#2 ------------------------------------------------------------
consensus_10941#0 GACATCCATCATAGCAATCATACTTCTACACGATTCCAAACTGAATCCATCAAAAGTAAA 944
consensus_10941#1 ACCAATAGTTAGTAGATCAG-CACCTTCTCGTCTCATTTTTCTTCTATTCTTTTGCATTA 686
consensus_10941#2 ------------------------------------------------------------
consensus_10941#0 ATCTCGTGTAAATGCACAATTCAATATATCACGTAATTCATCTGCATCAATTTCACCATC 1004
consensus_10941#1 A--ACCAACAATTAATGTTCCTTTATTTTCATCAT-CATCTTCATCTGGATCT-TCAACA 742
consensus_10941#2 ------------------------------------------------------------
consensus_10941#0 ATCACCAGCGACTT-TATTGAATGCTTTCTGTAATGCTTCTACTTGTACATCAGTCAATG 1063
consensus_10941#1 GTT--ACTACATATTGTGG-ATTTAT-CCAAAATGTATCAAGAAAATTACGACATCCACC 798
consensus_10941#2 ------------------------------------------------------------
consensus_10941#0 GTTTGACAACAGTCTACAATATCAATATCCAGATAGATACACAAAATAAAAAGATGTA-- 1121
consensus_10941#1 GGCTGATACAGAGTGCTGCAACAACCTTCTTCAATACACATTTCCCAAACACGATT-TCC 857
consensus_10941#2 ------------------------------------------------------------
consensus_10941#0 AATGGATACAATATCCATTAAGAAAAGAATACAAT-TGTATAAGTCAATCACATTCATAG 1180
consensus_10941#1 GTCCATTT-CACCCATAGACTGTGGTCCAAGATGACATATTTCAAGTTTTTCATAGTTTG 916
consensus_10941#2 ------------------------------------------------------------
consensus_10941#0 GAACACACACACACACAGAGCGAGAGACAGAAAGGGAAAGGGAGAATAGAAACCATATTC 1240
consensus_10941#1 ATATAAAATCCTGATAAGACATC-CAAAATTCACCATCATCATCAAATGTTAAACCAAGT 975
consensus_10941#2 ------------------------------------------------------------
consensus_10941#0 ACACAAA-TCAGAGCATCATTTTATACGATTCATTA--GTTGTCTACTGAAAAACCAGAT 1297
consensus_10941#1 TGTTGCCTTTGTTCTGGTGACTCGTGGAAATGTCCACAGTGACTCGTGGGTGACTCGTG- 1034
consensus_10941#2 ------------------------------------------------------------
consensus_10941#0 TGGTAGTAGTTGCTGCATAACTTATTATATTGAATACAATCAAT--TGAATCACAAGTGA 1355
consensus_10941#1 ------------------------------------------------------------
consensus_10941#2 ------------------------------------------------------------
consensus_10941#0 CATAACACATCAATCAATGAAAAAGTAAACAATCATCATGCGATAGATGTCTAGTTTATC 1415
consensus_10941#1 -----------
consensus_10941#2 -----------
consensus_10941#0 CCTATTCATAG 1426
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||