cluster # 10946

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Schistosoma mansoni
cluster # 10946 cluster # 10946 Sequences # 26 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10946#0 length = 1797 sequences # 24

consensus_10946#1 length = 301 sequences # 1
consensus_10946#2 length = 201 sequences # 1

consensusID : consensus_10946#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 24
consensus length = 1797
fasta sequence

                              [ATCGGTTATAATCATAGCTTCGTTAGAGACCGGGTTCAGTGAAAGCTTGGTTGTTTCCCTACAAAAATGTTAATGGCTTTGCTTAATAATTTAATACATAAGCCTGAAGTTCTCTGTCGAAAATCAATTTTCCGTCTTGTGAACATTCCGAACTGTTTATACAGCACTGAACAAGATGATATACCGTTTCATCTCATGGTTGAAGGATTTTATGATAAAGCTTCAGCCCTTGTTGAACAAAATTTGATATCAAAACTCCAATCAAAAGCGCCAGACAATGAAAAGACGAAAATTGTCAAAGGGACCCTCAACATAATTCGGCCACCTACTCACATTTTCGAAGTTAACTTTCCGCACAAAGCTGATGATGGAACATTCAAGATTATTCAAGGCTTTAGAGCTCAACATAGTGTGCACAGGCGACCCACTAAGGGTGGCATTCGGTATAGCATGGACGTGTGCAGAGAAGAAGTTATGGCTCTTGCTGCTCTGATGACGTATAAATGTGCCGTCGTAGATGTTCCATTCGGTGGCGCCAAGGGGGGAATCAAGATAAATCCCAAAGACCACTCTCCAGCAGAATTAGAAAGGATAACCCGTCGGTTTGCTCTTGAGTTGGCAAAACAAGGATTTCTTGGTCCCGGAACTGATGTTCCTGCTCCGGATATGGGGACTGGACCTCGGGAGATGAGTTGGATTGCGGATACGTATGCAAACACCGTAGGTCACAACGATATGCACAGTCATGCTTGTGTAACAGGAAAGTCCATCGCTATGGGTGGTATTCACGGTCGCATTTCGGCCACAGGACGCGGGGTTTATCATGGGATAGACAACTTCTTAAATAACCCAAAGTATGCGGATGCTATCGGTTTGTCCCCAGGGCTGAAGGATAAAACTTTCATTGTTCAGGGATTCGGGAATGTT-GGTTTGCATACAATGCGGTATCTAGTGCGTGCTGGTGCGAAATGTATTGGTATTGCTGAAATCGACGGACAGATTTACAACCCAGATGGTATAGATCCACGAGAACTCGAAGATTGGCAAATCGCAAAT-GGTA--CGATT--GTTGGCTTTCCACATGCAAAGCCATATACAAAAGATTCTCTTCTTTTCGAGGAATGTGATATTCTTATTCCTGCGGCAAATGAAAAACAAATCCATAGTGGCAACGCAGATAAGATCAGAGCAAAACTAATCGGGGAGGGTGCAAATGGT-CCCACTACACCAAAAGCCGATAAAATACTGCGAGAGAAGA-ATAAGTTGGTTATTCCAGATTTGTATCTGAATGCTGGTGGTGTTACTGTGTCGTATTTTGAATGGCTTAAAAATTTAAATCACGTGAGCTATGGTCGACTAACCTTTAAGTACGAACGAGATTCCAACTATCAGTTACTAAATAGTGTACAACAGTCTTTAGAGAAGAAGTTTGCTGACAGAATACCGATAACACCATCCGAAGATTTTCAGCTTCGCATTGCGGGGGCATCTGAGCGCGATATTGTTCACTCTGGTCTAGAGTATACTATGGAGCGATCTGCTAAGCGCATCATGAATATTGGGAATACCTACAACCTTGGATTAGATGTTCGTACAGCTGCATATATCAGTGCTATTGAAAAAATATACAATGTCTATTTGGAATCTGGCTTTGTCTTCACTTAAGTGTCTCGTACAACTTCATACCTTTGTCGTCGAAATTGCAATTACGGCATGACAGATAAAAGATATTCAACTGGCAGTTCTTTTATGTAATCAAA-ATAAAATATCTTTTATAGGTATTGGAAAAAAAAAAAAAAA]

[+] EMBL BG931070             [ATCGGTTATAATCATAGCTTCGTTAGAGACCGGGTTCAGTGAAAGCTTGGTTGTTTCCCTACAAAAATGTTAATGGCTTTGCTTAATAATTTAATACATAAGCCTGAAGTTCTCTGTCGAAAATCAATTTTCCGTCTTGTGAACATTCCGAACTGTTTATACAGCACTGAACAAGATGATATACCGTTTCATCTCATGGTTGAAGGATTTTATGATAAAGCTTCAGCCCTTGTTGAACAAAATTTGATATCAAAACTCCAATCAAAAGCGCCAGACAATGAAAAGACGAAAATTGTCAAAGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD166227             [                                          AAGCTTGGTTGTTTCCCTACAAAAATGTTAATGGCTTTGCTTAATAATTTAATACATAAGCCTGAAGTTCTCTGTCGAAAATC ATTTTCCGTCTTGTGAACATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD154575             [                                                                                                                                                           TTTATACAGCACTGAACAAGATGATATACCGTTTCATCTCATGGTTGAAGGATTTTATGATAAAGCTTCAGCCCTTGTTGAACAAAATTTGATATCAAAACTCCAATCAAAAGCGCCAGACAATGAAAAGACGAAAATTGTCAAAGGGACCCTCAACATAATTCGGCCACCTACTCACATTTTCGAAGTTAACTTTCCGCACAAAGCTGATGATGGAACATTCAAGATTATTCAAGGCTTTAGAGCTCAACATAGTGTGCACAGGCGACCCACTAAGGGTGGCATTCGGTATAGCATGGACGTGTGCAGAGAAGAAGTTATGGCTCTTGCTGCTCTGATGACGTATAAATGTGCCGTCGTAGATGTTCCATTCGGTGGCGCCAAGGGGGGAATCAAGATAAATCCCAAAGACCACTCTCCAGCAGAATTAGAAAGGATAACCCGTCGGTTTGCTCTTGAGTTGGCAAAACAAGGATTTCTTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD154385             [                                                                                                                                                            TTATACAGCACTGAACAAGATGATATACCGTTTCATCTCATGGTTGAAGGATTTTATGATAAAGCTTCAGCCCTTGTTGAACAAAATTTGATATCAAAACTCCAATCAAAAGCGCCAGACAATGAAAAGACGAAAATTGTCAAAGGGACCCTCAACATAATTCGGCCACCTACTCACATTTTCGAAGTTAACTTTCCGCACAAAGCTGATGATGGAACATTCAAGATTATTCAAGGCTTTAGAGCTCAACATAGTGTGCACAGGCGACCCACTAAGGGTGGCATTCGGTATAGCATGGACGTGTGCAGAGAAGAAGTTATGGCTCTTGCTGCTCTGATGACGTATAAATGTGCCGTCGTAGATGTTCCATTCGGTGGCGCCAAGGGGGGAATCAAGATAAATCCCAAAGACCACTCTCCAGCAGAATTAGAAAGGATAACCCGTCGGTTTGCTCTTGAGTTGGCAAAACAAGGATTTCTTGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD130800             [                                                                                                                                                                                                                            CTTCAGCCCTTGTTGAACAAAATTTGATATCAAAACTCCAATCAAAAGCGCCAGACAATGAAAAGACGAAAATTGTCAAAGGGACCCTCAACATAATTCGGCCACCTACTCACATTTTCGAAGTTAACTTTCCGCACAAAGCTGATGATGGAACATTCAAGATTATTCAAGGCTTTAGAGCTCAACATAGTGTGCACAGGCGACCCACTAAGGGTGGCATTCGGTATAGCATGGACGTGTGCAGAGAAGAAGTTATGGCTCTTGCTGCTCTGATGACGTATAAATGTGCCGTCGTAGATGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD117871             [                                                                                                                                                                                                                                                                                                                                                                                   AACATTCAAGATTATTCAAGGCTTTAGAGCTCAACATAGTGTACACAGGCGACCCACTAAGGGTGGCATTCGGTATAGCATGGACGTGTGCAGAGAAGAAGTTATGGCTCTTGCTGCTCTGATGACGTATAAATGTGCCGTCGTAGATGTTCCATTCGGTGGCGCCAAGGGGGGAATCAAGATAAATCCCAAAGACCACTCTCCAGCAGAATCAGAAAGGATAACCCGTCGGTTTGCTCTTGAGTTGGCAAAACAAGGATTTCTTGGTCCCGGAACTGATGTTCCTGCTCCGGATATGGGGACTGGACCTCGGGAGATGAGTTGGATTGCGGATACGTATGCAAACACCGTAGGTCACAACGATATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD078593             [                                                                                                                                                                                                                                                                                                                                                                                                                CTCAACATAGTGTGCACAGGCGACCCACTAAGGGTGGCATTCGGTATAGCATGGACGTGTGCAGAGAAGAAGTTATGGCTCTTGCTGCTCTGATGACGTATAAATGTGCCGTCGTAGATGTTCCATTCGGTGGCGCCAAGGGGGGAATCAAGATAAATCCCAAAGACCACTCTCCAGCAGAATTAGAAAGGATAACCCGTCGGTTTGCTCTTGAGTTGGCAAAACAAGGATTTCTTGGTCCCGGAACTGATGTTCCTGCTCCGGATATGGGGACTGGACCTCGGGAGATGAGTTGGATTGCGGATACGTATGCAAACACCGTAGGTCACAACGATATGCACAGTCATGCTTGTGTAACAGGAAAGTCCATCGCTATGGGTGGTATTCACGGTCGCATTTCGGCCACAGGACGCGGNGTTTATCATGGGATAGACAACTTCTTANATAACCCANAGTATGCGGATGCTATCGGTTTGTCCCCAGGGCTGAAGGATAAAACTTTCATTGTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD185041             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTATAAATGTGCCGTCGTAGATGTTCCATTCGGTGGCGCCAAGGGGGGAATCAAGATAAATCCCAAAGACCACTCTCCAGCAGAATTAGAAAGGATAACCCGTCGGTTTGCTCTTGAGTTGGCAAAACAAGGATTTCTTGGTCCCGGAACTGATGTTCCTGCTCCGGATATGGGGACTGGACCTCGGGAGATGAGTTGGATTGCGGATACGTATGCAAACACCGTAGGTCACAACGATATGCACAGTCATGCTTGTGTAACAGGAAAGTCCATCGCTATGGGTGGTATTCACGGTCGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD200482             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TAAATCCCAAAGACCACTCTCCAGCAGAATTAGAAAGGATAACCCGTCGGTTTGCTCTTGAGTTGGCAAAACAAGGATTTCTTGGTCCCGGAACTGATGTTCCTGCTCCGGATATGGGGACTGGACCTCGGGAGATGAGTTGGATTGCGGATACGTATGCAAACACCGTAGGTCACAACGATATGCACAGTCATGCTTGTGTAACAGGAAAGTCCATCGCTATGGGTGGTATTCACGGTCGCATTTCGGCCACAGGACGCGGGGTTTATCATGGGATAGACAACTTCTTAAATAACCCAAAGTATGCGGATGCTATCGGTTTGTCCCCAGGGCTGAAGGATAAAACTTTCATTGTTCAGGGATTCGGGAATGTT GGTTTGCATACAATGCGGTATCTAGTGCGTGCTGGTGCGAAATGTATTGGTATTGCTGAAATCGACGGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD146784             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAGGATAACCCGTCGGTTTGCTCTTGAGTTGGCAAAACAAGGATTTCTTGGTCCCGGAACTGATGTTCCTGCTCCGGATATGGGGACTGGACCTCGGGAGATGAGTTGGATTGCGGATACGTATGCAAACACCGTAGGTCACAACGATATGCACAGTCATGCTTGTGTAACAGGAAAGTCCATCGCTATGGGTGGTATTCACGGTCGCATTTCGGCCACAGGACGCGGGGTTTATCATGGGATAGACAACTTCTTAAATAACCCAAAGTATGCGGATGCTATCGGTTTGTCCCCAGGGCTGAAGGATAAAACTTTCATTGTTCAGGGATTCGGGAATGTT GGTTTGCATACAATGCGGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD127252             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 agacaAGGTAGGTCCATCGCTATGGGCTGTATTCACGGTCGCATTTCGGCCACACGACGCGGGGTTTATCATGGGATAGACAACTTCTTAAATAACCCAAAGTATGCGGATGCTATCGGTTTGTCCCCAGGGCTGAAGGATAAAACTTTCATTGTTCAGGGATTCGGGAATGTT GGTTTGCATACAATGCGGTATCTAGTGCGTGCTGGTGCGAAATGTTTTGGTATTGCTGAAATCGACGGACAGATTTACAACCCAGATGGTATAGATCCACGAGAACTCGAAGATTGGCAAATCGCAAAT GGTA  CGATT  GTTGGCTTTCCACATGCAAAGCCATATACAAAAGATTCTCTTCTTTTCGAGGAATGTGATATTCTTATTCCTGCGGCAAATGAAAAACAAATCCATAGTGGCAACGCAGATAAGATCAGAGCAAAACTAATCGGGGAGGGTGCAGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD112019             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACGCGGGGTTTATCATGGGATAGACAACTTCTTAAATAACCCAAAGTATGCGGATGCTATCGGTTTGTCCCCAGGGCTGAAGGATAAAACTTTCATTGTTCAGGGATTCGGGAATGTT GGTTTGCATACAATGCGGTATCTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD170364             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AACTTCTTAAATAACCCAAAGTATGCGGATGCTATCGGTTTGTCCCCAGGGCTGAAGGATAAAACTTTCATTGTTCAGGGATTCGGGAATGTT GGTTTGCATACAATGCGGTATCTAGTGCGTGCTGGTGCGAAATGTATTGGTATTGCTGAAATCGACGGACAGATTTACAACCCAGATGGTATAGATCCACGAGAACTCGAAGATTGGCAAATCGCAAAT GGTA  CGATT  GTTGGCTTTCCACATGCAAAGCCATATACAAGAGATTCTCTTCTTTTCGAGGAATGTGATATTCTTATTCCTGCGGCAAACGAAAAACAAATCCATAGTGGCAACGCAGATAAGATCAGAGCAAAACTAATCGGGGAGGGTGCAAATGGT CCCACTACACCAAAAGCCGATAAAATACTGCGAGAGAAGA ATAAGTTGGTTATTCCAGATTTGTATCTGAATGCTGGTGGTGTTACTGTGTCGTATTTTGAATGGCTTAAAAATTTAAATCACGTGAGCTATGGTCGACTAACCTTTAAGTACGAACGAGATTCCAACTATCAGTTACT                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD180826             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATAAAACTTTCATTGTTCAGGGATTCGGGAATGTT GGTTTGCATACAATGCGGTATCTAGTGCGTGCTGGTGCGAAATGTATTGGTATTGCTGAAATCGACGGACAGATTTACAACCCAGATGGTATAGATCCACGAGAACTCGAAGATTGGCAAATCGCAAAT GGTA  CGATT  GTTGGCTTTCCACATGCAAAGCCATATACAAAAGATTCTCTTCTTTTCGAGGAATGTGATATTCTTATTCCTGCGGCAAATGAAAAACAAATCCATAGTGGCAACGCAGATAAGATCAGAGCAAAACTAATCGGGGAGGGTGCAAATGGT CCCACTACACCAAAAGCCGATAAAATACTGCGAGAGAAGA ATAAGTTGGTTATTCCAGATTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD163030             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAAACTTTCATTGTTCAGGGATTCGGGAATGTT GGTTTGCATACAATGCGGTATCTAGTGCGTGCTGGTGCGAAATGTATTGGTATTGCTGAAATCGACGGACAGATTTACAACCCAGATGGTATAGATCCACGAGAACTCGAAGATTGGCAAATCGCAAAT GGTA  CGATT  GTTGGCTTTCCACATGCAAAGCCATATACAAAAGATTCTCTTCTTTTCGAGGAATGTGATATTCTTATTCCTGCGGCAAATGAAAAACAAATCCATAGTGGCAACGCAGATAAGATCAGAGCAAAACTAATCGGGGAGGGTGCAAATGGT CCCACTACACCAAAAGCCGATAAAATACTGCGAGAGAAGA ATAAGTTGGTTATTCCAGATTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD143067             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      cGGAATGTTNGGTTTGCATGCAATGCGGTATCTAGTGCGTGCTGGTGCGAAATGTATTGGTATTGCTGAAATCGACGGACAGATTTACAACNCAGATGGTATAGATCCACGAGAACTCGAAGATTGGCAAATCGCAAAT GGTA  CGATT  GTTGGCTTTCCACATGCAAAGCCATATACAAAAGATTCTCTTCTTTTCGAGGAATGTGATATCCTTATTCCTGCGGCAAATGAAAAACAAATCCATAGTGGCAACGCAGATAAGATCAGAGCAAAACTAATCGGGGAGGGTGCAAATGGT CCCACTACACCAAAAGCCGATAAAATACTGCGAGAGAAGA ATAAGTTGGTTATTCCAGATTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD091044             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTAGTGCGTGCTGGTGCGAAATGTATTGGTATTGCTGAAATCGACGGACAGATTTACAACCCAGATGGTATAGATCCACGAGAACTCGAAGATTGGCAAATCGCAAAT GGTA  CGATT  GTTGGCTTTCCACATGCAAAGCCATATACAAAAGTTTCTCTTCTTTTCGAGGAATGTGATATTCTTATTCCTGCGGCAAATGAAAAACAAATCCATAGTGGCAACGCAGATAAGATCAGAGCAAAACTAATCGGGGAGGGTGCAAATGGT CCCACTACACCTAAAGCCGATAAAATACTGCGAGAGAAGA ATAAGTTGGTTATTCCAGATTTGTATCTGAATGCTGGTGGTGTTACTGTGTCGTATTTTGAATGGCTTAAAAATTTAAATCACGTGAGCTATGGTCGACTAACCTTTAAGTACGAACGAGATTCCAACTATCAGTTACTAAATAGTG                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD144102             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGTATTGGTATNGCTGAAATCGACGGACAGATTTACAACCCAGATGGTATAGATCCACGAGAACTCGAAGATTGGCAAATCGCAAAT GGTA  CGATT  GTTGGCTTTCCACATGCAAAGCCATATACAAAAGATTCTCTTCTTTTCGAGGAATGTGATATTCTTATTCCTGCGGCAAATGAAAAACAAATCCATAGTGGCAACGCAGATAAGATCAGAGCAAAACTAATCGGGGAGGGTGCAAATGGT CCCACTACACCAAAAGCCGATAAAATACTGCGAGAGAAGA ATAAGTTGGTTATTCCAGATTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD084410             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTATAGATCCACGAGAACTCGAAGATTGGCAAATCGCAAAT GGTA  CGATT  GTTGGCTTTCCACATGCAAAGCCATATACAAAAGATTCTCTTCTTTTCGAGGAATGTGATATTCTTATTCCTGCGGCAAATGAAAAACAAATCCATAGTGGCAACGCAGATAAGATCAGAGCAAAACTAATCGGGGAGGGTGCCAATTGTCCCCATAAAACCAAAGCCCGTTAAATTACTGCAAGAGAAGATATAAGTTGGTTATTCCAGATTTGTATCTGAATGCTGGTGGTGTTACTGTGTCGTATTTTGAATGGCTTAAAAATTTAAATCACGTGAGCTATGGTCGACTAACCTTTAAGTACGAACGAGATTCCAACTATCAGTTACTAAATAGTGTACAACAGTCTTTAGAGAAGAAGTTTGCTGACAGAATACCGATAACACCATCCGAAGATTTTCAGCTTCGCATTGCGGGGGCATCTGAGCGCGATATTGTTCACTC                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD075519             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GAAGATTGGCAAATCGCAAAT GGTA  CGATT  GTTGGCTTTCCACATGCAAAGCCATATACAAAAGATTCTCTTCTTTTCGAGGAATGTGATATTCTTATTCCTGCGGCAAATGAAAAACAAATCCATAGTGGCAACGCAGATAAGATCAGAGCAAAACTAATCGGGGAGGGTGCAAATGGT CCCACTACACCAAAAGCCGATAAAATACTGCGAGAGAAGA ATAAGTTGGTTATTCCAGATTTGTATCTGAATGCTGGTGGTGTTACTGTGTCGTATTTTGAATGGCTTAAAAATTTAAATCACGTGAGCTATGGTCGACTAACCTTTAAGTACGAACGAGATTCCAACTATCAGTTACTAAATAGTGTACAACAGTCTTTAGAGAAGAAGTTTGCTGACAGAATACCGATAACACCATCCGAAGATTTTCAGCTTCGCATTGCGGGGGCATCTGAGCGCGATATTGTTCACTCTGGTCTAGAGTATACTATGGAGCGATCTGCTAAGCGCATCATGAATATTGGGAATACCTACAACCTTGGATTAGATGTTCGTACAGCTGCATATATCAGTGCTATTGAAAAAATATACAATGTCTATTTGGAATCTGGCTTTGTCTTCACTTAAGTGTCTCGTACAACTTCATACCTTTGTCGTCGAAATTGCAATTACGGCATGACAGATAAAAGATATTCAACTGGCAGTTCTTTTATGTAATCAAAGATAAAATATCTTTTA                         ]
[+] EMBL CD081788             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGCAAATCGCAAATGGGTACCCGATTGGGTTGGCTTTCCACATGCAAAGCCATATACAAAAGATTCTCTTCTTTTCGAGGAATGTGATATTCTTATTCCTGCGGCAAATGAAAAACAAATCCATAGTGGCAACGCAGATAAGATCAGAGCAAAACTAATCGGGGAGGGTGCAAATGGT CCCACTACACCAAAAGCCGATAAAATACTGCGAGAGAAGA ATAAGTTGGTTATTCCAGATTTGTATCTGAATGCTGGTGGTGTTACTGTGTCGTATTTTGAATGGCTTAAAAATTTAAATCACGTGAGCTATGGTCGACTAACCTTTAAGTACGAACGAGATTCCAACTATCAGTTACTAAATAGTGTACAACAGTCTTTAGAGAAGAAGTTTGCTGACAGAATACCGATAACACCATCCGAAGATTTTCAGCTTCGCATTGCGGGGGCATCTGAGCGCGATATTGTTCACTCTGGTCTAGAGTATACTATGGAGCGATCTGCTAAGCGCATCATGAATATTGGGAATACCTACAACCTTGGATTAGATGTTCGTACAGCTGCATATATCAGTGCTATTGAAAAAATATACAATGTCTATTTGGAATCTGGCTTTGTCTTCACTTAAGTGTCTCGTACAACTTCATACCTTTGTCGTCGAAATTGCAATTACGGCATGACAGATAAAAGATATTCAACTGGCAGTTCTTTTATGTAATCAAA ATAAAATATCTTTTA                         ]
[+] EMBL CD132689             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TATGGTCGACTAACCTTTAAGTACGAACGAGATTCCAACTATCAGTTACTAAATAGTGTACAACAGTCTTTAGAGAAGAAGTTTGCTGACAGAATACCGATAACACCATCCGAAGATTTTCAGCTTCGCATTGCGGGGGCATCTGAGCGCGATATTGTTCACTCTGGTCTAGAGTATACTATGGAGCGATCTGCTAAGCGCATCATGAATATTGGGAATACCTACAACCTTGGATTAGATGTTCGTACAGCTGCATATATCAGTGCTATTGAAAAAATATACAATGTCTATTTGGAATCTGGCTTTGTCTTCACTTAAGTGTCTCGTACAACTTCATACCTTTGTCGTCGAAATT                                                                                                   ]
[-] EMBL AI395282             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TAAATTGTGACCAACAGTCTTTAGAGAAGAAGTNTGCTGACAGAATACCGATAACACCATCCGAAGATTTTCAGCTTCGCATTGCGGGGGCATCTGAGCGCGATATTGTTCACTCTGGTCTAGAGTATACTATGGAGCGATCTGCTAAGCGCATCATGAATATTGGGAATACCTACAACCTTGGATTAGATGTTCGTACAGCTGCATATATCAGTGCTATTGAAAAAATATACAATGTCTATTTGGAATCTGGCTTTGTCTTCACTTAAGTGTCTCGTACAACTTCATACCTTTGTCGTCGAAATTGCAATTACGGCATGACAGATAAAAGATATTCAACTGGCAGTTCTTTTATGTAATCAAA ATAAAATATCTTTTATAGGTATTGGAAAAAAA        ]
[-] EMBL AI395661             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GATAACACCATCCGAAGATTTTCAGCTTCGCATTGCGGGGCCATTCGAGCGCGATATTGTTCACTCTGGTCTAGAGTATCCTATGGAGCGATCTGCTAAGCGCATCATGAATATTGGGAATACCTACAACCTTGGATTAGATGTTCGTACAGCTGCATATATCAGTGCTATTGAAAAAATATACAATGTCTATTTGGAATCTGGCTTTGTCTTCACTTAAGTGTCTCGTACAACTTCATACCTTTGTCGTCGAAATTGCAATTACGGCATGACAGATAAAAGATATTCAACTGGCAGTTCTTTTATGTAATCAAA ATAAAATATCTTTTATAGGTATTGAAAAAAAAAAAAAAAA]




>consensus_10946#0
ATCGGTTATAATCATAGCTTCGTTAGAGACCGGGTTCAGTGAAAGCTTGGTTGTTTCCCT
ACAAAAATGTTAATGGCTTTGCTTAATAATTTAATACATAAGCCTGAAGTTCTCTGTCGA
AAATCAATTTTCCGTCTTGTGAACATTCCGAACTGTTTATACAGCACTGAACAAGATGAT
ATACCGTTTCATCTCATGGTTGAAGGATTTTATGATAAAGCTTCAGCCCTTGTTGAACAA
AATTTGATATCAAAACTCCAATCAAAAGCGCCAGACAATGAAAAGACGAAAATTGTCAAA
GGGACCCTCAACATAATTCGGCCACCTACTCACATTTTCGAAGTTAACTTTCCGCACAAA
GCTGATGATGGAACATTCAAGATTATTCAAGGCTTTAGAGCTCAACATAGTGTGCACAGG
CGACCCACTAAGGGTGGCATTCGGTATAGCATGGACGTGTGCAGAGAAGAAGTTATGGCT
CTTGCTGCTCTGATGACGTATAAATGTGCCGTCGTAGATGTTCCATTCGGTGGCGCCAAG
GGGGGAATCAAGATAAATCCCAAAGACCACTCTCCAGCAGAATTAGAAAGGATAACCCGT
CGGTTTGCTCTTGAGTTGGCAAAACAAGGATTTCTTGGTCCCGGAACTGATGTTCCTGCT
CCGGATATGGGGACTGGACCTCGGGAGATGAGTTGGATTGCGGATACGTATGCAAACACC
GTAGGTCACAACGATATGCACAGTCATGCTTGTGTAACAGGAAAGTCCATCGCTATGGGT
GGTATTCACGGTCGCATTTCGGCCACAGGACGCGGGGTTTATCATGGGATAGACAACTTC
TTAAATAACCCAAAGTATGCGGATGCTATCGGTTTGTCCCCAGGGCTGAAGGATAAAACT
TTCATTGTTCAGGGATTCGGGAATGTTGGTTTGCATACAATGCGGTATCTAGTGCGTGCT
GGTGCGAAATGTATTGGTATTGCTGAAATCGACGGACAGATTTACAACCCAGATGGTATA
GATCCACGAGAACTCGAAGATTGGCAAATCGCAAATGGTACGATTGTTGGCTTTCCACAT
GCAAAGCCATATACAAAAGATTCTCTTCTTTTCGAGGAATGTGATATTCTTATTCCTGCG
GCAAATGAAAAACAAATCCATAGTGGCAACGCAGATAAGATCAGAGCAAAACTAATCGGG
GAGGGTGCAAATGGTCCCACTACACCAAAAGCCGATAAAATACTGCGAGAGAAGAATAAG
TTGGTTATTCCAGATTTGTATCTGAATGCTGGTGGTGTTACTGTGTCGTATTTTGAATGG
CTTAAAAATTTAAATCACGTGAGCTATGGTCGACTAACCTTTAAGTACGAACGAGATTCC
AACTATCAGTTACTAAATAGTGTACAACAGTCTTTAGAGAAGAAGTTTGCTGACAGAATA
CCGATAACACCATCCGAAGATTTTCAGCTTCGCATTGCGGGGGCATCTGAGCGCGATATT
GTTCACTCTGGTCTAGAGTATACTATGGAGCGATCTGCTAAGCGCATCATGAATATTGGG
AATACCTACAACCTTGGATTAGATGTTCGTACAGCTGCATATATCAGTGCTATTGAAAAA
ATATACAATGTCTATTTGGAATCTGGCTTTGTCTTCACTTAAGTGTCTCGTACAACTTCA
TACCTTTGTCGTCGAAATTGCAATTACGGCATGACAGATAAAAGATATTCAACTGGCAGT
TCTTTTATGTAATCAAAATAAAATATCTTTTATAGGTATTGGAAAAAAAAAAAAAAA

consensusID : consensus_10946#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 301
fasta sequence

                              [GATCATACCATTTGCGTTGATTACGAACTTCCATGTCCAACGTTTTACTGTTAGCCGCTGCACTTTAACTTTTCAGGGGGTTTATCATGGGATAGACAACTTCTTAAATAACCCAAAGTATGCGGATGCTATCGGTTTGTCCCCAGGGCTGAAGGATAAAACTTTCATTGTTCAGGGATTCGGGAATGTTGGTTTGCATACAATGCGGTATCTAGTGCGTGCTGGTGCGAAATGTATTGGTATTGCTGAAATCGACGGACAGATTTACAACCCAGATGGTATAGATCCACGAGAACTCGAA]

[+] EMBL CD063381             [GATCATACCATTTGCGTTGATTACGAACTTCCATGTCCAACGTTTTACTGTTAGCCGCTGCACTTTAACTTTTCAGGGGGTTTATCATGGGATAGACAACTTCTTAAATAACCCAAAGTATGCGGATGCTATCGGTTTGTCCCCAGGGCTGAAGGATAAAACTTTCATTGTTCAGGGATTCGGGAATGTTGGTTTGCATACAATGCGGTATCTAGTGCGTGCTGGTGCGAAATGTATTGGTATTGCTGAAATCGACGGACAGATTTACAACCCAGATGGTATAGATCCACGAGAACTCGAA]




>consensus_10946#1
GATCATACCATTTGCGTTGATTACGAACTTCCATGTCCAACGTTTTACTGTTAGCCGCTG
CACTTTAACTTTTCAGGGGGTTTATCATGGGATAGACAACTTCTTAAATAACCCAAAGTA
TGCGGATGCTATCGGTTTGTCCCCAGGGCTGAAGGATAAAACTTTCATTGTTCAGGGATT
CGGGAATGTTGGTTTGCATACAATGCGGTATCTAGTGCGTGCTGGTGCGAAATGTATTGG
TATTGCTGAAATCGACGGACAGATTTACAACCCAGATGGTATAGATCCACGAGAACTCGA
A

consensusID : consensus_10946#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 201
fasta sequence

                              [ACGTATAAATGTGCCGTCGTAGATGTTCCATTCGGTGGCGCCAAGGGGGGAATCAAGATAAATCCCAAAGACCACTCTCCAGCAGAATTAGAAAGGATAACCCGTCGGTTTGCTCTTGAGTTGGCAAAACAAGGATTTCTTGGTCCCGGTACTGATGTTCCTGCTCCGGATATGGGGACAAACCGATAGCATACCACATAC]

[-] EMBL CD063728             [ACGTATAAATGTGCCGTCGTAGATGTTCCATTCGGTGGCGCCAAGGGGGGAATCAAGATAAATCCCAAAGACCACTCTCCAGCAGAATTAGAAAGGATAACCCGTCGGTTTGCTCTTGAGTTGGCAAAACAAGGATTTCTTGGTCCCGGTACTGATGTTCCTGCTCCGGATATGGGGACAAACCGATAGCATACCACATAC]




>consensus_10946#2
ACGTATAAATGTGCCGTCGTAGATGTTCCATTCGGTGGCGCCAAGGGGGGAATCAAGATA
AATCCCAAAGACCACTCTCCAGCAGAATTAGAAAGGATAACCCGTCGGTTTGCTCTTGAG
TTGGCAAAACAAGGATTTCTTGGTCCCGGTACTGATGTTCCTGCTCCGGATATGGGGACA
AACCGATAGCATACCACATAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10946#0      ATCGGTTATAATCATAGCTTCGTTAGAGACCGGGTTCAGTGAAAGCTTGGTTGTTTCCCT 60
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      ACAAAAATGTTAATGGCTTTGCTTAATAATTTAATACATAAGCCTGAAGTTCTCTGTCGA 120
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      AAATCAATTTTCCGTCTTGTGAACATTCCGAACTGTTTATACAGCACTGAACAAGATGAT 180
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      ATACCGTTTCATCTCATGGTTGAAGGATTTTATGATAAAGCTTCAGCCCTTGTTGAACAA 240
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      AATTTGATATCAAAACTCCAATCAAAAGCGCCAGACAATGAAAAGACGAAAATTGTCAAA 300
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      GGGACCCTCAACATAATTCGGCCACCTACTCACATTTTCGAAGTTAACTTTCCGCACAAA 360
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      GCTGATGATGGAACATTCAAGATTATTCAAGGCTTTAGAGCTCAACATAGTGTGCACAGG 420
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      CGACCCACTAAGGGTGGCATTCGGTATAGCATGGACGTGTGCAGAGAAGAAGTTATGGCT 480
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      -------------------------------------------GATCATACCATTTGCGT 17
                                                                                   

consensus_10946#0      CTTGCTGCTCTGATGACGTATAAATGTGCCGTCGTAGATGTTCCATTCGGTGGCGCCAAG 540
consensus_10946#2      ---------------ACGTATAAATGTGCCGTCGTAGATGTTCCATTCGGTGGCGCCAAG 45
consensus_10946#1      TGATTACGAACTTCCATGTCCAACGTTTTACTGTTAGCCGCTGCACTTTAACTTTTCAGG 77
                                      * **  **   *    *  ***  * * ** *         ** *

consensus_10946#0      GGGGGAATCAAGATAAATCCCAAAGACCACTCTCCAGCAGAATTAGA--AAGGATAACCC 598
consensus_10946#2      GGGGGAATCAAGATAAATCCCAAAGACCACTCTCCAGCAGAATTAGA--AAGGATAACCC 103
consensus_10946#1      GGGTTTATCATGGG-------ATAGACAACTTCTTAAATAACCCAAAGTATGCGGATGCT 130
                       ***   **** *         * **** ***    *    *   * *  * *   *  * 

consensus_10946#0      GTCGGTTTGCTCTTGAGTTGGCAAAACAAGGATTTCTTGGTCCCGGAACT-GATGTTCCT 657
consensus_10946#2      GTCGGTTTGCTCTTGAGTTGGCAAAACAAGGATTTCTTGGTCCCGGTACT-GATGTTCCT 162
consensus_10946#1      ATCGGTTTGTCCCCAGGGCTGAAGGATAAAACTTTCATTGTTCAGGGATTCGGGAATGTT 190
                        ********  *    *   * *  * **   **** * ** * ** * * *    *  *

consensus_10946#0      GCTCCGGATATGGGGACTGGACCTCGGGAGATGAGTTGGATTGCGGATACGTATGCAAAC 717
consensus_10946#2      GCTCCGGATATGGGGACAAACCGATAGCATACCACATAC--------------------- 201
consensus_10946#1      GGTTTGCATACAATGCGGTATCTAGTGCGTGCTG-GTGCGAAATGTATTGGTATTGCTGA 249
                       * *  * ***    *      *    *         *                       

consensus_10946#0      ACCGTAGGTCACAACGATATGCACAGTCATGCTTGTGTAACAGGAAAGTCCATCGCTATG 777
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      AATCGACGGACAGATTTACAACCCAGATGGTATAGATCCACGAGAACTCGAA-------- 301
                                                                                   

consensus_10946#0      GGTGGTATTCACGGTCGCATTTCGGCCACAGGACGCGGGGTTTATCATGGGATAGACAAC 837
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      TTCTTAAATAACCCAAAGTATGCGGATGCTATCGGTTTGTCCCCAGGGCTGAAGGATAAA 897
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      ACTTTCATTGTTCAGGGATTCGGGAATGTTGGTTTGCATACAATGCGGTATCTAGTGCGT 957
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      GCTGGTGCGAAATGTATTGGTATTGCTGAAATCGACGGACAGATTTACAACCCAGATGGT 1017
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      ATAGATCCACGAGAACTCGAAGATTGGCAAATCGCAAATGGTACGATTGTTGGCTTTCCA 1077
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      CATGCAAAGCCATATACAAAAGATTCTCTTCTTTTCGAGGAATGTGATATTCTTATTCCT 1137
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      GCGGCAAATGAAAAACAAATCCATAGTGGCAACGCAGATAAGATCAGAGCAAAACTAATC 1197
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      GGGGAGGGTGCAAATGGTCCCACTACACCAAAAGCCGATAAAATACTGCGAGAGAAGAAT 1257
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      AAGTTGGTTATTCCAGATTTGTATCTGAATGCTGGTGGTGTTACTGTGTCGTATTTTGAA 1317
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      TGGCTTAAAAATTTAAATCACGTGAGCTATGGTCGACTAACCTTTAAGTACGAACGAGAT 1377
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      TCCAACTATCAGTTACTAAATAGTGTACAACAGTCTTTAGAGAAGAAGTTTGCTGACAGA 1437
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      ATACCGATAACACCATCCGAAGATTTTCAGCTTCGCATTGCGGGGGCATCTGAGCGCGAT 1497
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      ATTGTTCACTCTGGTCTAGAGTATACTATGGAGCGATCTGCTAAGCGCATCATGAATATT 1557
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      GGGAATACCTACAACCTTGGATTAGATGTTCGTACAGCTGCATATATCAGTGCTATTGAA 1617
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      AAAATATACAATGTCTATTTGGAATCTGGCTTTGTCTTCACTTAAGTGTCTCGTACAACT 1677
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      TCATACCTTTGTCGTCGAAATTGCAATTACGGCATGACAGATAAAAGATATTCAACTGGC 1737
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------
                                                                                   

consensus_10946#0      AGTTCTTTTATGTAATCAAAATAAAATATCTTTTATAGGTATTGGAAAAAAAAAAAAAAA 1797
consensus_10946#2      ------------------------------------------------------------
consensus_10946#1      ------------------------------------------------------------