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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10983#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1631 fasta sequence
[CCTCCGAGGCCANAATTCGGCACGAGGAGCAAAAAGCAATGTTTTGTTCGAACATAAGGTCGTTGGGAGTACCCAGCTTTGCCAAGTGGCTGACACATTTTGTCCGTCCGTCTTCTCTTTCAAAGAATTACTAACTGATAGTAAGAAATGGTCCTGGTGTTTCTTCTTCCCGTGTCCTTTCCAATCTACCAGATAGCCGGCAGATCCCTTCAAACTCTGAGATCTGTTCATCGTTCTTCTCCAACCGATTTGGCGGCACAGCCAGTGACGGTCTTACAACGGATAGAATAAGTCACCCAACCGTCACTCACTCTAACTCACCTACATCTCCATTCGACAATATGTTGACCTCTACACATTCGTTTGAAAATTTCCTGCCATCAAGTTTAAGACAATTAACACAGTCTGGACAATCTCATATACAAAATTCGTCAGGTCCCTCACTAAACCCATGTCAGTCTGATACTCCACTGCCTCCCGAAATGCGACCTGACATTCACCTTACCCCTTTCAGTGACTCCCAGTGTGTTCTTCCTATTACTGCCTCTCAATTCTATTCCAGTCATCAGTTTGAAAATACAAAAAAACTCCAGGCCTCTGGTAGCCTTAAAGTCGCCCCCTGGATTCTTGTCCCACCAGTTCCTGAGGGCACTGCAGCTCATATGAGAACAGGAAGAGTTCATGAAGCTAAGCCAAACTTGTTCAACAACCCTTCATTTGGTCCCATAGTAATTGATGATGACTTCAAGCACGCCCTGCACAGTAAACTTCAAGCTTGCTTGTTCACGGCTGATGAGTCCACAAAGGAAAAATTACCTCGTAATCTAGGAGCTTACACTGACGTCGTTCCTCTAGAAGTTTTAGACCAACCAAGAGTATCAGTTACATTTGGCCTTCCTGGAGTTTGTTTTAAAGCTTGGTCTCCTCGATTTAATCGATATATGCTTCTTCGACGCATAATTTTACCACATGATCATGAAGCAGCTTTAGCACCTGATGCTTTTTATTTAGCTAAACAACTATCTGATTTAAATCATTCTGCTATTGTTGGGTTTCGGGATGTATTTTTCACTGATGCATTTGCTGATAACTCGGTTATCTTGGTTTATGAATACATACCTTGTTCATCAACTCTACAACAAATTCATATGAGTGATCCATTGAAATTAACTAGTTTTACTTCGCCTTTCAGTATTGGTCGCTCAGTGTTACCCCATAGTGCCATAAAAAATGCTCCATCTGATCTCGGAATGCCCCATGAGTCTGTTATGTGGTCATATTTAATCCAATTAACCAGTGGTTTGCGTTTTATTCACCAGACGTTTCACCGATCATGTGGTATACTGGATCCTACTAAAGTGTTATTACAAGACGGACCGCGTTTGCGAATCAATTGTTTTGGTTTAAAGGATATTCTGTTCTATTCTGCACAAGATACTAATTTAGTGGAAAGTCAGGCAGATGACTTTATACAACTTGGCAAATTAATGATAGGAGTTGCTTGTGGTACAGTTGCAGCTGTACAGGCTAGTCAACGAGCTTCTTCATTCAATCTACTTCAACGTGCATATCGACCAGAATTAGTCACTCTTATTCGAAGTTTAGTATCACGACAGATATCAGGAGCAGAT]
[+] EMBL CD081959 [CCTCCGAGGCCANAATTCGGCACGAGGAGCAAAAAGCAATGTTTTGTTCGAACATAAGGTCGTTGGGAGTACCCAGCTTTGCCAAGTGGCTGACACATTTTGTCCGTCCGTCTTCTCTTTCAAAGAATTACTAACTGATAGTAAGAAATGGTCCTGGTGTTTCTTCTTCCCGTGTCCTTTCCAATCTACCAGATAGCCGGCAGATCCCTTCAAACTCTGAGATCTGTTCATCGTTCTTCTCCAACCGATTTGGCGGCACAGCCAGTGACGGTCTTACAACGGATAGAATAAGTCACCCAACCGTCACTCACTCTAACTCACCTACATCTCCATTCGACAATATGTTGACCTCTACACATTCGTTTGAAAATTTCCTGCCATCAAGTTTAAGACAATTAACACAGTCTGGACAATCTCATATACAAAATTCGTCAGGTCCCTCACTAAACCCATGTCAGTCTGATACTCCACTGCCTCCCGAAATGCGACCTGACATTCACCTTACCCCTTTCAGTGACTCCCAGTGTGTTCTTCCTATTACTGCCTCTCAATTCTATTCCAGTCATCAGTTTGAAAATACAAAAAAACTCCAGGCCTCTGGTAGCCTTAAAGTCGCCCNCTGGATTCTTGTCCCACCAGTTCCTGAGGGCACTGCAGCTCATATG ]
[-] EMBL CD155686 [ TGCCAAGTGGCTGACACATTTTGTCCGTCCGTCTTCTCTTTCAAAGAATTACTAACTGATAGTAAGAAATGGTCCTGGTGTTTCTTCTTCCCGTGTCCTTTCCAATCTACCAGATAGCCGGCAGATCCCTTCAAACTCTGAGATCTGTTCATCGTTCTTCTCCAACCGATTTGGCGGCACAGCCAGTGACGGTCTTACAACGGATAGAATAAGTCACCCAACCGTCACTCACTCTAACT ]
[-] EMBL CD155815 [ TGCCAAGTGGCTGACACATTTTGTCCGTCCGTCTTCTCTTTCAAAGAATTACTAACTGATAGTAAGAAATGGTCCTGGTGTTTCTTCTTCCCGTGTCCTTTCCAATCTACCAGATAGCCGGCAGATCCCTTCAAACTCTGAGATCTGTTCATCGTTCTTCTCCAACCGATTTGGCGGCACAGCCAGTGACGGTCTTACAACGGATAGAATAAGTCACCCAACCGTCACTCACTCTAACTCACCTACATCTCCATTCGACAATATGTTGACCTCTACACATTCGTTTGAAAATTTCCTGCCATCAAGTTTAAGACAATTAACACAGTCTGGACAATCTCATATACAAAATTCGTCAGGTCCCTCACTAAACCCATGTCAGTCTGATA ]
[-] EMBL CD182889 [ CTTACAACGGATAGAATAAGTCACCCAACCGTCACTCACTCTAACTCACCTACATCTCCATTCGACAATATGTTGACCTCTACACATTCGTTTGAAAATTTCCTGCCATCAAGTTTAAGACAATTAACACAGTCTGGACAATCTCATATACAAAATTCGTCAGGTCCCTCACTAAACCCATGTCAGTCTGATA ]
[+] EMBL CD199768 [ ATGCGACCTGACATTCACCTTACCCCTTTCAGTGACTCCCAGTGTGTTCTTCCTGTTACTGCCTCTCAATTCTATTCCAGTCATCAGTTTGAAAATACAAAAAAACTCCAGGCCTCTGGTAGCCTTAAAGTCGCCCCCTGGATTCTTGTCCCACCAGTTCCTGAGGGCACTGCAGCTCATATGAGAACAGGAAGAGTTCATGAAGCTAAGCCAAACTTGTTCAACAACCCTTCATTTGGTCCCATAGTAATTGATGATGACTTCAAGC ]
[+] EMBL CD199679 [ ATGCGACCTGACATTCACCTTACCCCTTTCAGTGACTCCCAGTGTGTTCTTCCTATTACTGCCTCTCAATTCTATTCCAGTCATCAGTTTGAAAATACAAAAAAACTCCAGGCCTCTGGTAGCCTTAAAGTCGCCCCCTGGATTCTTGTCCCACCAGTTCCTGAGGGCACTGCAGCTCATATGAGAACAGGAAGAGTTCATGAAGCTAAGCCAAACTTGTTCAACAACCCTTCATTTGGTCCCATAGTAATTGATGATGACTTCAAGC ]
[-] EMBL CD199751 [ TGCGACCTGACATTCACCTTACCCCTTTCAGTGACTCCCAGTGTGTTCTTCCTATTACTGCCTCTCAATTCTATTCCAGTCATCAGTTTGAAAATACAAAAAAACTCCAGGCCTCTGGTAGCCTTAAAGTCGCCCCCTGGATTCTTGTCCCACCAGTTCCTGAGGGCACTGCAGCTCATATGAGAACAGGAAGAGTTCATGAAGCTAAGCCAAACTTGTTCAACAACCCTTCATTTGGTCCCATAGTAATTGATGATGACTTCAAGCA ]
[-] EMBL CD199756 [ TGCGACCTGACATTCACCTTACCCCTTTCAGTGACTCCCAGTGTGTTCTTCCTATTACTGCCTCTCAATTCTATTCCAGTCATCAGTTTGAAAATACAAAAAAACTCCAGGCCTCTGGTAGCCTTAAAGTCGCCCCCTGGATTCTTGTCCCACCAGTTCCTGAGGGCACTGCAGCTCATATGAGAACAGGAAGAGTTCATGAAGCTAAGCCAAACTTGTTCAACAACCCTTCATTTGGTCCCATAGTAATTGATGATGACTTCAAGCA ]
[-] EMBL CD199759 [ TGCGACCTGACATTCACCTTACCCCTTTCAGTGACTCCCAGTGTGTTCTTCCTATTACTGCCTCTCAATTCTATTCCAGTCATCAGTTTGAAAATACAAAAAAACTCCAGGCCTCTGGTAGCCTTAAAGTCGCCCCCTGGATTCTTGTCCCACCAGTTCCTGAGGGCACTGCAGCTCATATGAGAACAGGAAGAGTTCATGAAGCTAAGCCAAACTTGTTCAACAACCCTTCATTTGGTCCCATAGTAATTGATGATGACTTCAAGCA ]
[+] EMBL CD136841 [ GAAGAGTTCATGAAGCTAAGCCAAACTTGTTCAACAACCCTTCATTTGGTCCCATAGTAATTGATGATGACTTCAAGCACGCCCTGCACAGTAAACTTCAAGCTTGCTTGTTCACGGCTGATGAGTCCACAAAGGAAAAATTACCTCGTAATCTAGGAGCTTACACTGACGTCGTTCCTCTAGAAGTTTTAGACCAACCAAGAGTATCAGTTACATTTGGCCTTCCTGGAGTTTGTTTTAAAGCTTGGTCTCCTCGATTTAATCGATATATGCTTCTTCGACGCATAATTTTACCACATGATCATGAAGCAGCTTTAGCACCTGATGCTTTTTATTTAGCTAAACAACTATCTGATTTAAATCATTCTGCTATTGTTGGGTTTCGGGATGTATTTTTCACTGATGCATTTGCTGATAACTCGGT ]
[-] EMBL CD136884 [ AAGAGTTCATGAAGCTAAGCCAAACTTGTTCAACAACCCTTCATTTGGTCCCATAGTAATTGATGATGACTTCAAGCACGCCCTGCACAGTAAACTTCAAGCTTGCTTGTTCACGGCTGATGAGTCCACAAAGGAAAAATTACCTCGTAATCTAGGAGCTTACACTGACGTCGTTCCTCTAGAAGTTTTAGACCAACCAAGAGTATCAGTTACATTTGGCCTTCCTGGAGTTTGTTTTAAAGCTTGGTCTCCTCGATTTAATCGATATATGCTTCTTCGACGCATAATTTTACCACATGATCATGAAGCAGCTTTAGCACCTGATGCTTTTTATTTAGCTAAACAACTATCTGATTTAAATCATTCTGCTATTGTTGGGTTTCGGGATGTATTTTTCACTGATGCATTTGCTGATAACTCGGTT ]
[+] EMBL CD188890 [ AAACAACTATCTGATTTAAATCATTCTGCTATTGTTGGGTTTCGGGATGTATTTTTCACTGATGCATTTGCTGATAACTCGGTTATCTTGGTTTATGAATACATACCTTGTTCATCAACTCTACAACAAATTCATATGAGTGATCCATTGAAATTAACTAGTTTTACTTCGCCTTTCAGTATTGGTCGCTCAGTGTTACCCCATAGTGCCATAAAAAATGCTCCATCTGATCTCGGAATGCCCCATGAGTCTGTTATGTGGTCATATTTAATCCAATTAACCAGTGGTTTGCGTTTTATTCACCAGACGTTTCACCGATCATGTGGTATACTGGATCCTACTAAAGTGTTATTACAAGACGGACCGCGTTTGCGAATCAATTGTTTTGGTTTAAAGGATATTCTGTTCTATTCTGCACAAGATACTATTTTAGTGGAAAGTCAGGCAGATGACTTTATACAACTTGGCAAATTAATGATAGGAGTTGCTTGTGGTACAGTTGCAGCTGTACAGGCTAGTCAACGAGCTTCTTCATTCAATCTACTTCAACG ]
[-] EMBL CD188785 [ TACATACCTTGTTCATCAACTCTACAACAAATTCATATGAGTGATCCATTGAAATTAACTAGTTTTACTTCGCCTTTCAGTATTGGTCGCTCAGTGTTACCCCATAGTGCCATAAAAAATGCTCCATCTGATCTCGGAATGCCCCATGAGTCTGTTATGTGGTCATATTTAATCCAATTAACCAGTGGTTTGCGTTTTATTCACCAGACGTTTCACCGATCATGTGGTATACTGGATCCTACTAAAGTGTTATTACAAGACGGACCGCGTTTGCGAATCAATTGTTTTGGTTTAAAGGATATTCTGTTCTATTCTGCACAAGATACTAATTTAGTGGAAAGTCAGGCAGATGACTTTATACAACTTGGCAAATTAATGATAGGAGTTGCTTGTGGTACAGTTGCAGCTGTACAGGCTAGTCAACGAGCTTCTTCATTCAATCTACTTCAACGTGCATATCGACCAGAATTAGTCACTCTTATTCGAAGTTTAG ]
[+] EMBL CD112829 [ CCATAGTGCCATAAAAAATGCTCCATCTGATCTCGGAATGCCCCATGAGTCTGTTATGTGGTCATATTTAATCCAATTAACCAGTGGTTTGCGTTTTATTCACCAGACGTTTCACCGATCATGTGGTATACTGGATCCTACTAAAGTGTTATTACAAGACGGACCGCGTTTGCGAATCAATTGTTTTGGTTTAAAGGATATTCTGTTCTATTCTGCACAAGATACTAATTTAGTGGAAAGTCAGGCAGATGACTTTATACAACTTGGCAAATTAATGATAGGAGTTGCTTGTGGTACAGTTGCAGCTGTACAGGCTAGTCAACGAGCTTCTTCATTCAATCTACTTCAACGTGCATATCGACCAGAATTAGTCACTCTTATTCGAAGTTTAGTATCACGACAGATATCAGGAGCAGAT]
[+] EMBL CD180494 [ ATGCTCCATCTGATCTCGGAATGACCCATGAGTCTGTTATGTGGTCATATTTAATCCAATTAACCAGTGGTTTGCGTTTTATTCACCAGACGTTTCACCGATCATGTGGTATACTGGATCCTACTAAAGTGTTATTACAAGACGGACCGCGTTTGCGAATCAATTGTTTTGGTTTAAAGGATATTCTGTTCTATTCTGCACAAGATACTAATTTAGTGGAAAGTCAGGCAGATGACTTTATACAACTTGGCAAATTAATGATAGGAGTTGCTTGTGGTACAGTTGCAGCTGTACAGGCTAGTCAACGAGCTTCTTCATTCAATCTACTTCAAGGTGCATATCGACCAGAATTAGTCACTCTTA ]
consensusID : consensus_10983#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 828 fasta sequence
[CCTGAACATTCTCTTAATAGAAATTGCGTAAGATACGAAGTTTCATCATACTGGGAAAGTCATGACGTCCAACTACGTTCATGGTGGTGCAGGGATCCAGAACAGTATGCTATCGTACACTTTGAAAAATCTGTCACTCGGGTCCAATCAAATTGCTCAGATGAATGACCAAACTAACTCATTGTGTATGACTCCACCAGCTACGCAAATGAATTTTCTTCGTCCTATTCCTGGTGCATCTAGTGAGGCTGCTTTCCCAAACACACATCGTTCAGCTTCTGGTCGTACGTTGGGGATAGCAGATTTCCTCTCACTGAATACTACTCCAACTAACAGACCTTCTGTATTGTCCACTGTATCTATTTCGAAAGCATCACTCGCTCCCCAAAATGGACATCCGACGAGAGCTCCTGAAAGAGTGGCTCTAACGTCGAAAGCAGTGGTTCCGGGAAACCATGGATTTGCCAGCATGTTCCGTCCCCGAGGTCCTGGTGTTTCTTCTTCCCGTGTCCTTTCCAATCTACCAGATAGCCGGCAGATCCCTTCAAACTCTGAGATCTGTTCATCGTTCTTCTCCAACCGATTTGGCGGCACAGCCAGTGACGGTCTTACAACGGATAGAATAAGTCACCCAACCGTCACTCACTCTAACTCACCTACATCTCCATTCGACAATATGTTGACCTCTACACATTCGTTTGAAAATTTCCTGCCATCAAGTTTAAGACAATTAACACAGTCTGGACAATCTCATATACAAAATTCGTCAAGTCCCTCACTAANACCATGTCAGTCTGATACTCCACTGCCTNCCGAAATGCGACCTGA]
[+] EMBL CD161267 [CCTGAACATTCTCTTAATAGAAATTGCGTAAGATACGAAGTTTCATCATACTGGGAAAGTCATGACGTCCAACTACGTTCATGGTGGTGCAGGGATCCAGAACAGTATGCTATCGTACACTTTGAAAAATCTGTCACTCGGGTCCAATCAAATTGCTCAGATGAATGACCAAACTGACTCATTGTGTATGACTCCACCAGCTACGCAAATGAATTTTCTTCGTCCTATTCCTGGTGCATCTAGTGAGGCTGCTTTCCCAAACACACATCGTTCAGCTTCTGGTCGTACGTTGGGGATAGCAGATTCCCTCTCACTGAATACTACTCCAACTAACAGACCTTCTGTATTGTCCACTGTATCTATTTCGAAAGCATCACTCGCTCCCCAAAATGGACATCCGACGAGAGCTCCTGAAAGAGTGGCTCTAACGTCGAAAGCAGTGGTTCCGGGAAACCATGGATTTGCCAGCATGTTCC ]
[+] EMBL CD195190 [ TCTCTTAATCTACATCGCGTTAGATACGACTTGTCATCATACTGGGAAAGGCGTGACTTTCAACTACGGACATGGTGGTGCAAGGATCCA AACAGCAAGCTATCGTACACTGTGAAAAATCTGTTGCTCGGGTCCAATCAAATTGCTCATATGAATGACCAAACTAACTCATTGTGTATGACTCCACCAGCTACTCATATGAATATTCTTCGTCCTATTCCTGGTGCATCTAGTGAGGCTGCTTTCCCAAACACACATCGTTCAGCTTCTGGTCGTACGTTGGGGATAGCAGATTTCCTCTCACTGAATACTACTCCAACTAACAGACCTTCTGTATTGTCCACTGTATCTATTTCGAAAGCATC ]
[+] EMBL CD114182 [ ACACTTTGAAAAATCTGTCACTCGGGTCCAATCAAATTGCTCAGATGAATGACCAAACTAACTCATTGTGTATGACTCCACCAGCTACGCAAATGAATTTTCTTCGTCCTATTCCTGGTGCATCTAGTGAGGCTGCTTTCCCAAACACACATCGTTCAGCTTCTGGTCGTACGTTGGGGATAGCAGATTTCCTCTCACTGAATACTACTCCAACTAACAGACCTTCTGTATTGTCCACTGTATCTATTTCGAAAGCATCACTCGCTCCCCAAAATGGACATCCGACGAGAGCTCCTGAAAGAGTGGCTCTAACGTCGAAAGCAGTGGTTCCGGGAAACCATGGATTTGCCAGCATGTTCCGTCCCCGAGGTCCTGGTGTTTCTTCTTCCCGTGTCCTTTCCAATCTACCAGATAGCCGGCAGATCCCTTCAAACTCTGAGATCTGTTCATCGTTCTTCTCCAACCGATTTGGCGGCACAGCCAGTGACGGTCTTACAACGGATAGAATAAGTCACCCAACCGTCACTCACTCTAACTCACCTACATCTCCATTCGACAATATGTTGACCTCTACACATTCGTTTGAAAATTTCCTGCCATCAAGTTTAAGACAATTAACACAGTCTGGACAATCTCATATACAAAATTCGTCAAGTCCCTCACTAANACCATGTCAGTCTGATACTCCACTGCCTNCCGAAATGCGACCTGA]
[-] EMBL CD114261 [ CACTTTGAAAAATCTGTCACTCGGGTCCAATCAAATTGCTCAGATGAATGACCAAACTAACTCATTGTGTATGACTCCACCAGCTACGCAAATGAATNTTCTTCGTCCTATTCNTGGTGCATCTAGTGAGGCTGCTTTCCCAAACACACATCGTTCAGCTTCTGGTCGTACGTTGGGGATAGCAGATTTCCTCTCACTGAATACTACTCCAACTAACAGACCTTCTGTATTGTCCACTGTATCTAATTTGAAAGCGTCACTCGCTCCCCAAAATGGACATCCGACGAGAGCTCCTGAAAGAGTGGCTCTAACGTCGAAAGCAGTGGTTCCGGGAAACCATGGATTTGCCAGCATGTTCCGTCCCCAAGGTCCTGGTGTTTATTCTTCCAGTGTCCTTTCCAATCTACCAGATAGCCGGCAGATCCCTTCAAACTGTGAGATATGTTCATCGTTCTTCTCCAACCGATTTGGCGGCACAGCCAGTGACGGTCTTACAACGGATAGAATAAGTCACCCATCCGTCACTCACTGTAACTCACCTACATCTCCATTCGACAATATGTTGACCTCTACACATTCGTTTGAAAATTTCCCGCCATCAAGTTTAAGACAATTAACACAGTCTGGAC ]
[+] EMBL CD125401 [ TGGGTTTGCCAGCATGTTCCGTCCCCGAGGTCCTGGTGTTTCTTCTTCCCGTGTCCTTTCCAATCTACCAGATAGCCGGCAGATCCCTTCAAACTCTGAGATCTGTTCATCGTTCTTCTCCAACCGATTTGGCGGCACAGCCAGTGACGGTCTTACAACGGATAGAATAAGTCACCCAACCGTCACTCACTCTAACTCACCTACATCTCCATTCGACAATATGTTGACCTCTACACATTCGTTTGAAAATTTCCTGCCATCAAGTTTAAGACAATTAACACAGTCTGGACAATCTCATATACAAAATTCGTCAGGTCCCTCACTAAACCCATGT ]
consensusID : consensus_10983#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 530 fasta sequence
[GAATCTCGACAGTGTGCAACGTGCATATCGACCAGAATTAGTCACTCTTATTCGAAGATTTAGTATCAGGACAGATATCAGGAGCAGATCAACTAATGCGAGCTACTGCACCATTTGCATTCGATCACTTAACAAGGTTATATGATCACTCAGATCTCTTGGAAAGTCAATTATTATTGGAACTGGAATGTGACAGACTTTTCCGACTCATCTGTAAACTTCAGTCTATTGTGGAGCGTTGCGATCAGGGTACTTCCCCAGAATGGTCTGAAACAGGTGATCGTTATATGTTGAAATTATTTCGAGATTTCGTATTTCACCAATCCGATCCCCTTGGTGCTCCATACTTAGATCTTGCACATATTATTACTACACTGAACAAGGTCGAAGCTGCTTCACCTGAACGTCTTTGTCTAGTCAGCCGTGATAGTCAAAATGTGATTATTGTCACCTATGCAGATATTAAACAATGGTTAGATACAAGCTTTTCTTATCTAGTGGATAAACATCGTCGGAGTCAATGTGAACTA]
[+] EMBL CD061238 [GAATCTCGACAGTGTGCAACGTGCATATCGACCAGAATTAGTCACTCTTATTCGAAGATTTAGTATCAGGACAGATATCAGGAGCAGATCAACTAATGCGAGCTACTGCACCATTTGCATTCGATCACTTAACAAGGTTATATGATCACTCAGATCTCTTGGAAAGTCAATTATTATTGGAACTGGAATGTGACAGACTTTTCCGACTCATCTGTAAACTTCAGTCTATTGTGGAGCGTAGCGATCAGGGTACTTCCCCAGAATGGTCTGAAACAGGTGATCGTTATATGTTGAAATTATTTCGAGATTTCGTATTTCACCAATCCGATCCCCTTGGTGCTCCAT ]
[+] EMBL CD155303 [ ATCAACTAATGCGAGCTACTGCACCATTTGCATTCGATCACTTAACAAGGTTATATGATCACTCAGATCTCTTGGAAAGTCAATTATTATTGGAACTGGAATGTGACAGACTTTTCCGACTCATCTGTAAACTTCAGTCTATTGTGGAGCGTTGCGATCAGGGTACTTCCCCAGAATGGTCTGAAACAGGTGATCGTTATATGTTGAAATTATTTCGAGATTTCGTATTTCACCAATCCGATCCCCTTGGTGCTCCATACTTAGATCTTGCACATATTATTACTACACTGAACAAGGTCGAAGCTGCTTCACCTGAACGTCTTTGTCTAGTCAGTCGTGATAGTCAAAATGTGATTATTGTCACCTATGCAGATATTAAACAATGGTTAGATACAAGCTTTTCTTATCTAGTGGATAAACATCGTCGGAGTCAATGTGAACTA]
[+] EMBL CD130460 [ TGCGAGCTACTGCACCATTTGCATTCGATCACTTAACAGGGTTATATGATCACTCAGATCTCTTGGAAAGTCAATTATTATTGGAACTGGAATGTGACAGACTTTTCCGACTCATCTGTAAACTTCAGTCTATTGTGGAGCGTTGCGATCAGGGTACTCCCCCAGAATGGTCTGAAACAGGTGATCGTTATATGTTGAAATTATTTCGAGATTTCGTATTTCACCAATCCGATCCCCTTGGTGCTCCATACTTAGATCTTGCACATATTATTACTACAC ]
[+] EMBL CD130403 [ CTGCACCATTTGCATTCGATCACTTAACAAGGTTATATGATCACTCAGATCTCTTGGAAAGTCAATTATTATTGGAACTGGAATGTGACAGACTTTTCCGACTCATCTGTAAACTTCAGTCTATTGTGGAGCGTTGCGATCAGGGTACTCCCCCAGAATGGTCTGAAACAGGTGATCGTTATATGTTGAAATTATTTCGAGATTTCGTATTTCACCAATCCGATCCCCTTGGTGCTCCATACTTAGATCTTGCACATATTATTACTACACTGAACAAGGTCGAAGCTGCTTCACCTGAACGTCTTTGTCTAGTCAGCCGTGATAGTCAAAATGTGATTATTGTCACCTATGCAGATA ]
[-] EMBL CD130448 [ TGCACCATTTGCATTCGATCACTTAACAAGGTTATATGATCACTCAGATCTCTTGGAAAGTCAATTATTATTGGAACTGGAATGTGACAGACTTTTCCGACTCATCCGTAAACTTCAGTCTATTGTGGAGCGTTGCGATCAGGGTACTTCCCCAGAATGGTCTGAAACAGGTGATCGTTATATGTTGAAATTATTTCGAGATTTCGTATTTCACCAATCCGATCCCCTTGGTGCTCCATACTTAGATCTTGCACATATTATTACTACACTGAACAAGGTCGAAGCTGCTTCACCTGAACGTCTTTGTCTAGTCAGCCGTGATAGTCAAAATGTGATTATTGTCACCTATGCAGATATT ]
[+] EMBL CD116715 [ ATGATCACTCAGATCTCTTGGAAGGTCAATTATTATTGGAACTGGAATGTGACAGACTTTTCCGACTCATCTGTAAACTTCAGTCTATTGTGGAGCGTTGCGATCAGGGTACTTCCCCAGAATGGTCTGAAACAGGTGATCGTTATATGTTGAAATTATTTCGAGATTTCGCATTTCACCAATCCGATCCCCCTGGTGCTCCATACTTAGATCTTGCACATATTATTACTACACTGAACAAGGTCGAAGCTGCTTCACCTGAACGTCTTTGTCTAGTCAGCCGTGATAGTCAAAATGT ]
consensusID : consensus_10983#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 309 fasta sequence
[TACACTTTGAAAAATCTGTCACTCGGGTCCAATCAAATTGCTCAGGTAAACGCGAATAACTGACACTTTACCGTTGTTATTTCTCGAACATGTCCTCGTGACAGATGAATGACCAAACTAACTCATTGTGTATGACTCCACCAGCTACGCAAATGAATTTTCTTCGTCCTATTCCTGGTGCATCTAGTGAGGCTGCTTTCCCAAACACACATCGTTCAGCTTCTGGTCGTACGTTGGGGATAGCAGATTTCCTCTCACTGAATACTACTCCAACTAACAGACCTTCTGTATTGTCCACTGTATCTATTT]
[+] EMBL CD195123 [TACACTTTGAAAAATCTGTCACTCGGGTCCAATCAAATTGCTCAGGTAAACGCGAATAACTGACACTTTACCGTTGTTATTTCTCGAACATGTCCTCGTGACAGATGAATGACCAAACTAACTCATTGTGTATGACTCCACCAGCTACGCAAATGAATTTTCTTCGTCCTATTCCTGGTGCATCTAGTGAGGCTGCTTTCCCAAACACACATCGTTCAGCTTCTGGTCGTACGTTGGGGATAGCAGATTTCCTCTCACTGAATACTACTCCAACTAACAGACCTTCTGTATTGTCCACTGTATCTATTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10983#1 ------------------------------------------------------------
consensus_10983#3 ------------------------------------------------------------
consensus_10983#0 CCTCCGAGGCCANAATTCGGCACGAGGAGCAAAAAGCAATGTTTTGTTCGAACATAAGGT 60
consensus_10983#2 ------------------------------------------------------------
consensus_10983#1 ------------------------------------------------------------
consensus_10983#3 ------------------------------------------------------------
consensus_10983#0 CGTTGGGAGTACCCAGCTTTGCCAAGTGGCTGACACATTTTGTCCGTCCGTCTTCTCTTT 120
consensus_10983#2 ------------------------------------------------------------
consensus_10983#1 --------------------------------------------CCTGAACATTCTCTTA 16
consensus_10983#3 ------------------------------------------------------------
consensus_10983#0 CAAAGAATTACTAACTGATAGTAAGAAATGGTCCTGGTGTTTCTTCTTCCCGTGTCCTTT 180
consensus_10983#2 ------------------------------------------------------------
consensus_10983#1 ATAGAAATTGCGTAAGATACGAAGTTTCATCATACTGGGAAAGTCAT--GACGTCCAACT 74
consensus_10983#3 ------------------------------TACACTTTGAAAAATCT--GTCACTCGGGT 28
consensus_10983#0 CCAATCTACCAGATAGCCGGCAGATCCCTTCAAACTCTGAGATCTGTTCATCGTTCTTCT 240
consensus_10983#2 ----GAATCTCGACAGTGTGCAACGTGCATATCGACCAGA-ATTAGT----CACTCTTAT 51
** * * * * *
consensus_10983#1 ACGTTCATGGTGGTGCAGGGATCCAGAACAGTATGCTATCGTACACTTTG-------AAA 127
consensus_10983#3 CCAATCAAATTGCTCAGGTAAACGCGAATAA--------CTGACACTTTA-------CCG 73
consensus_10983#0 CCAACCGATTTGGCGGCACAGCCAGTGACGGTCTTACAACGGATAGAATAAGTCACCCAA 300
consensus_10983#2 TCGAA-GATTTAGTATCAGGACAGATATCAGGAGCAGATCAACTAATGCG--------AG 102
* * * *
consensus_10983#1 AATCTG--TCACTCGGGTCCAATCAAATTGCT--CAGATGA-ATGACCAAACTAACTCAT 182
consensus_10983#3 TTGTTA--TTTCTCGAACATGTCCTCGTGAC----AGATGA-ATGACCAAACTAACTCAT 126
consensus_10983#0 CCGTCAC-TCACTCTAACTCACCTACATCTCCATTCGACAATATGTTGACCTCTACACAT 359
consensus_10983#2 CTACTGCACCATTTGCATTCGATCACTTAACA---AGGTTATATGATCACTCAGATCTCT 159
* * * * * *** * * *
consensus_10983#1 T-GTGTATGACT------CCACCAG--CTACGCAAATGAATTTTCTTCGTCCTATTCCTG 233
consensus_10983#3 T-GTGTATGACT------CCACCAG--CTACGCAAATGAATTTTCTTCGTCCTATTCCTG 177
consensus_10983#0 TCGTTTGAAAATTTCCTGCCATCAAGTTTAAGACAATTAACACAGTCTGGACAATCTCAT 419
consensus_10983#2 TGGAAAGTCAATT----ATTATTGG----AACTGGAATGTGACAGACTTTTCCGACTCAT 211
* * * * * * * * *
consensus_10983#1 GTGCAT--CTAGTGAGGCTGCTTTCCCAAACACACATCGTTCAGCTTCTGGTCGTACGTT 291
consensus_10983#3 GTGCAT--CTAGTGAGGCTGCTTTCCCAAACACACATCGTTCAGCTTCTGGTCGTACGTT 235
consensus_10983#0 ATACAAAATTCGTCAGG-TCCCTCACTAAACCCATGTCAGTCTGATACTCCAC-TGCCTC 477
consensus_10983#2 CTGTAAA---CTTCAGTCTATTGTGGAGCGTTGCGATCAGGGTACTTCCCCAGAATGGTC 268
* * * ** * ** * * *
consensus_10983#1 GGGGATAGCAGATTTCCTCTCACTGAATACTACTCCAACTAACAGACCTTCTGTATTGTC 351
consensus_10983#3 GGGGATAGCAGATTTCCTCTCACTGAATACTACTCCAACTAACAGACCTTCTGTATTGTC 295
consensus_10983#0 CCGAAATGCGACCTGACATTCACCT--TACCCCTTTCAGTGAC--TCCCAGTGTGTTCTT 533
consensus_10983#2 TGAAACAGGTGATCGTTATATGTTGAAATTATTTCGAGATTTCGTATTTCACCAATCCGA 328
* * * * * *
consensus_10983#1 CACTGTATCTATTTCGAAAGCATCACTCGCTCCCCAAAATGGACATCCGACGAGAGCTCC 411
consensus_10983#3 CACTGTATCTATTT---------------------------------------------- 309
consensus_10983#0 C-CTATTACTGCCTCTCAATTCTATTCCAGTCATCAGTTTGAAAATACAAAAAAACTCCA 592
consensus_10983#2 TCCCCTTGGTGCTCCATACTTAGATCTTGCACAT-ATTATTACTACACTGAACAAGGTCG 387
* * *
consensus_10983#1 TGAAAG-AGTGGCTCTAACGTCGAAAGCAGTGGTTCCGGGAAACCATGGATTTGCCAGCA 470
consensus_10983#3 ------------------------------------------------------------
consensus_10983#0 GGCCTCTGGTAGCCTTAAAGTCGCCCCCTGGATTCTTGTCCCACCAGTTCCTGAGGGCAC 652
consensus_10983#2 AAGCTG-CTTCACCTGAACGTCTTTGTCTAGTCAGCCGTGATAGTCAAAA-TGTGATTAT 445
consensus_10983#1 TGTTCCGTCCCCGAGGTCCTGGTGTTTCTTCTTCCCGTGTCCTTTCCAATCTACCAGATA 530
consensus_10983#3 ------------------------------------------------------------
consensus_10983#0 TGCAGCTCATATGAGAACAGGAAGAGTTCATGAAGCTAAGCCAAACTTGTTCAACAACCC 712
consensus_10983#2 TGTCACCTATGC-AGATATTAAACAATGGTTAGATACAAGCTTTTCTTATCTAGTGGATA 504
consensus_10983#1 GCCGGCAGATCCCTTCAAACTCTGAGATCTGTTCATCGTTCTTCTCCAACCGATTTGGCG 590
consensus_10983#3 ------------------------------------------------------------
consensus_10983#0 TTCATTTGGTCCCATAGTAATTGATGATGACTTCAAGCACGCCCTGCACAGTAAACTTCA 772
consensus_10983#2 AACAT-------CGTCGGAGTCAATGTGAACTA--------------------------- 530
consensus_10983#1 GCACAGCCAGTGACGGTCTTACAACGGATAGAATAAGTCACCCAACCGTCACTCACTCTA 650
consensus_10983#3 ------------------------------------------------------------
consensus_10983#0 AGCTTGCTTGTTCACGGCTGATGAGTCCACAAAGGAAAAATTACCTCGTAATCTAGGAGC 832
consensus_10983#2 ------------------------------------------------------------
consensus_10983#1 ACTCACCTACATCTCCATTCGACAATATGTTGACCTCTACACATTCGTTTGAAAATTTCC 710
consensus_10983#3 ------------------------------------------------------------
consensus_10983#0 TTACACTGACGTCGTTCCTCTAGAAGTTTTAGACCAAC-CAAGAGTATCAGTTACATTTG 891
consensus_10983#2 ------------------------------------------------------------
consensus_10983#1 TGCCATCAAGTTTAAGACAATTAACACAGTCTGGACAATCTCATATACAAAATTCGTCAA 770
consensus_10983#3 ------------------------------------------------------------
consensus_10983#0 GCCTTCCTGGAGTTTGTTTTAAAGCTTGGTCTCCTCGATTTAATCGATATATGCTTCTTC 951
consensus_10983#2 ------------------------------------------------------------
consensus_10983#1 GTCCCTCACTAANACCATGTCAGTCTGATACTCCACTGCCTNCCGAAATGCGACCTGA-- 828
consensus_10983#3 ------------------------------------------------------------
consensus_10983#0 GACGCATAATTTTACCACATGATCATGAAGCAGCTTTAGCACCTGATGCTTTTTATTTAG 1011
consensus_10983#2 ------------------------------------------------------------
consensus_10983#1 ------------------------------------------------------------
consensus_10983#3 ------------------------------------------------------------
consensus_10983#0 CTAAACAACTATCTGATTTAAATCATTCTGCTATTGTTGGGTTTCGGGATGTATTTTTCA 1071
consensus_10983#2 ------------------------------------------------------------
consensus_10983#1 ------------------------------------------------------------
consensus_10983#3 ------------------------------------------------------------
consensus_10983#0 CTGATGCATTTGCTGATAACTCGGTTATCTTGGTTTATGAATACATACCTTGTTCATCAA 1131
consensus_10983#2 ------------------------------------------------------------
consensus_10983#1 ------------------------------------------------------------
consensus_10983#3 ------------------------------------------------------------
consensus_10983#0 CTCTACAACAAATTCATATGAGTGATCCATTGAAATTAACTAGTTTTACTTCGCCTTTCA 1191
consensus_10983#2 ------------------------------------------------------------
consensus_10983#1 ------------------------------------------------------------
consensus_10983#3 ------------------------------------------------------------
consensus_10983#0 GTATTGGTCGCTCAGTGTTACCCCATAGTGCCATAAAAAATGCTCCATCTGATCTCGGAA 1251
consensus_10983#2 ------------------------------------------------------------
consensus_10983#1 ------------------------------------------------------------
consensus_10983#3 ------------------------------------------------------------
consensus_10983#0 TGCCCCATGAGTCTGTTATGTGGTCATATTTAATCCAATTAACCAGTGGTTTGCGTTTTA 1311
consensus_10983#2 ------------------------------------------------------------
consensus_10983#1 ------------------------------------------------------------
consensus_10983#3 ------------------------------------------------------------
consensus_10983#0 TTCACCAGACGTTTCACCGATCATGTGGTATACTGGATCCTACTAAAGTGTTATTACAAG 1371
consensus_10983#2 ------------------------------------------------------------
consensus_10983#1 ------------------------------------------------------------
consensus_10983#3 ------------------------------------------------------------
consensus_10983#0 ACGGACCGCGTTTGCGAATCAATTGTTTTGGTTTAAAGGATATTCTGTTCTATTCTGCAC 1431
consensus_10983#2 ------------------------------------------------------------
consensus_10983#1 ------------------------------------------------------------
consensus_10983#3 ------------------------------------------------------------
consensus_10983#0 AAGATACTAATTTAGTGGAAAGTCAGGCAGATGACTTTATACAACTTGGCAAATTAATGA 1491
consensus_10983#2 ------------------------------------------------------------
consensus_10983#1 ------------------------------------------------------------
consensus_10983#3 ------------------------------------------------------------
consensus_10983#0 TAGGAGTTGCTTGTGGTACAGTTGCAGCTGTACAGGCTAGTCAACGAGCTTCTTCATTCA 1551
consensus_10983#2 ------------------------------------------------------------
consensus_10983#1 ------------------------------------------------------------
consensus_10983#3 ------------------------------------------------------------
consensus_10983#0 ATCTACTTCAACGTGCATATCGACCAGAATTAGTCACTCTTATTCGAAGTTTAGTATCAC 1611
consensus_10983#2 ------------------------------------------------------------
consensus_10983#1 --------------------
consensus_10983#3 --------------------
consensus_10983#0 GACAGATATCAGGAGCAGAT 1631
consensus_10983#2 --------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||