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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10985#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1120 fasta sequence
[CTGAATCAGACAGCGTCTGACACCGTCACCACGAATCTCGAATGTAGTGACATCAGCATAGTAATATTTCAACTGGATTGTTGCACGAATAACCTAAAATGATGCACACATTTGCATGATTGACTCTGTTGGAACATGTATCCAAGTCACATGAGACGAATCAGTTTCATTCAAACTACCAATACAAACCGGATTTGGCTGATTGACGCGAATGATCTGTGAGTAGTAATAATACTGACAATAGGTATGTGTATTAACATCTGACTGATCACTTTCATATCGATATGAATCACTTTCGAGAAATACGCTTTCTTCATTCTCCACATCAGGTTGTTTACAATTGTCATTGCAGTTGAAGAATTTGTAGGGCCAAACGAAGATCAGATAGATTGATATCCAGCTATAGACTAGTCGAAAATGTATATCTCGAATGGTTGAAATGAACAAAACACAGTTATCTCATCTCATTCAATCGAATGGAAATTTGTACGACACACTTATTTGATGTATAGTGTTACTAGATAATCACCTGTTAAGGAAAGAGGCGACACACAGTCAGAGGAATGCCTACGTCTGTTCTTTCTGAATGTGTAATTGATCATTTGTGAGGATTTTGCAAGTGGATTTGTTGACACGCGTTGAAGTTGTATGGACGTGCTGACTTCCATTGATTGTTGTTTATTTTCCTTGATAACTCTTGCCACACAGTGTCCTGATTAAACTCATAACAATCCACATCGGTTTAATTCTACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTGCTGTATTCCATATGTGTGAAATGACAAACACTTACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAATTCTACTATGAACATCTGAACAATTGATGTCCAACAATCAAATGATTCGTGTTAATTAATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAACCGGACTACACTATTGATAAACTGGTGATGCTCTATACTTCGATCTTTTGT-ACACAATCATTATGAACTTGTCATTGTANAGTGTGATGACCAAAGTATCGAGAAGAGATTCT]
[+] EMBL CD082855 [CTGAATCAGACAGCGTCTGACACCGTCACCACGAATCTCGAATGTAGTGACATCAGCATAGTAATATTTCAACTGGATTGTTGCACGAATAACCTAAAATGATGCACACATTTGCATGATTGACTCTGTTGGAACATGTATCCAAGTCACATGAGACGAATCAGTTTCATTCAAACTACCAATACAAACCGGATTTGGCTGATTGACGCGAATGATCTGTGAGTAGTAATAATACTGACAATAGGTATGTGTATTAACATCTGACTGATCACTTTCATATCGATATGAATCACTTTCGAGAAATACGCTTTCTTCATTCTCCACATCAGGTTGTTTACAATTGTCATTGCAGTTGAAGAATTTGTAGGGCCAAACGAAGATCAGATAGATTGATATCCAGCTATAGACTAGTCGAAAATGTATATCTCGAATGGTTGAAATGAACAAAACACAGTTATCTCATCTCATTCAATCGAATGGAAATTTGTACGACACACTTATTTGATGTATAGTGTTACTAGATAATCACCTGTTAAGGAAAGAGGCGACACACAGTCAGAGGAATGCCTACGTCTGTTCTTTCTGAATGTGT ]
[+] EMBL CD081945 [ GCAGTTGAAGAATTTGTAGGGCCAAACGAAGATCAGATAGATTGATATCCAGCGATAGACTAGTCGAAAATGTATATCTCGAATGGTTGAAATGAACAAAACACAGTTATCTCATCTCATTCAATCGAATGGAAATTTGTACGACACACTTATTTGATGTATAGTGTTACTAGATAATCACCTGTTAAGGAAAGAGGCGACACACAGTCAGAGGAATGCCTACGTCTGTTCTTTCTGAATGTGTAATTGATCATTTGTGAGGATTTTGCAAGTGGATTTGTTGACACGCGTTGAAGTTGTATGGACGTGCTGACTTCCATTGATTGTTGTTTATTTTCCTTGATAACTCTTGCCACACAGTGTCCTGATTAAACTCATAACAATCCACATCGGTTTAATTCTACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTGCTGTATTCCATATGTGTGAAATGACAAACACTTACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAATTCTACTATGAACATCTGAACAATTGATGTCCAACAATCAAATGATTCGTGTTAATTAATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAACCGGACTACACTATTGATAAACTGGTGATGCTCTATACTTCGATCTTTTGT ACACAATCATTATGAACTTGTCATTGTANAGTGTGATGACCAAAGTATCGAGAAGAGATTCT]
[-] EMBL CD076441 [ GCGACACACAGTCAGAGGAATGCCTACGTCTGTTCTTTCTGAATGTGTAATTGATCATTTGTGAGGATTTTGCAAGTGGATTTGTTGACACGCGTTGAAGTTGTATGGACGTGCTGACTTCCATTGATTGTTGTTTATTTTCCTTGATAACTCTTGCCACACAGTGTCCTGATTAAACTCATAACAATCCACATCGGTTTAATTCTACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTGCTGTATTCCATATGTGTGAAATGACAAACACTTACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAATTCTACTATGAACATCTGAACAATTGATGTCCAACAATCAAATGATTCGTGTTAATTAATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAACCGGACTACACTATTGATAAACTGTTGATGCTCTATACTTCGATC TTTGTAACACAATCATTATGAACTTGTCATTGTAGAGTGTGATGACGAAGTTATCGAGAAGAGATTC ]
[-] EMBL CD118931 [ ATTTCGCAAGTACATTTGCTGTCACGTGGTGAAGTTGTATGGACGTGCTGACTTCCATTGATTGTTGTTTATTTTCCATGATAACTCTTGCCACACAGTGTCCTGATTAAACTCATAACAATCCACATCGGTTTAATTCTACTCACACGAAATATTCCACGCTACAATTGGATTCCAATACTTGAACAGCTACTGTATTCCATATGTATGAAATGACAAACACTTACATTCACATTACTATACACAGTCTCTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAATTCTACAGTGAACATTTGAACAATTGATGTCCAACAA ]
[+] EMBL CD118954 [ aagcacATTTGCTGTCACGTGGTGAAGTTGTATGGACGTGCTGACTTCCATTGATTGTTGTTTATTTTCCATGATAACTCTTGCCACACAGTGTCCTGATTAAACTCATAACAATCCACATCGGTTTAATTCTACTCACACGAAATATTCCACGCTACAATTGGATTCCAATACTTGAACAGCTACTGTATTCCATATGTATGAAATGACAAACACTTACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAATTCTACAGTGAACATTTGAACAATTGATGTCCAACA ]
consensusID : consensus_10985#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 692 fasta sequence
[ACGTTTGTTATTTTTAAATGTCATATTGATCATTTGTGAAGATCCTGCTAGTGGATTTGTTGTCACTTGGTGTAGTTGTATTGACGTGCTGACTTCCATTGATTGTCGTTCATTTTCCATGATAACTCTTGCCACACATTGTCCTGATCAAACTCATAACAATCCACACTGGTTCACTTCAACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTACTGTATCCCATATGTGTGAAATATCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCACCATTGAATTATTATGCGAAATTCTACAGTGAACATCTGAACAATTGATGTTCAACAATCAATGATTCGTATTACTTCATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC-ACTATTGATAAACTGTTGATTTCCAG-CAATGTCGCACCTCATTCGATTTGTGTAATTAACTCCACCACCGATTCTCAGTTTACATATTCATCTCCCTCTCAATCCACATTCACTTGTCAACAGAATTATATTCACAACATCTCTATCACTGCATG-----TTCACATGACCGTTTCTTCACTATGATTAACGTTACTTTTAATACCATTCGTATTTGCATTATTATTGCTATTATCATTATTATGACTATG]
[+] EMBL CD149354 [ACGTTTGTTATTTTTAAATGTCATATTGATCATTTGTGAAGATCCTGCTAGTGGATTTGTTGTCACTTGGTGTAGTTGTATTGACGTGCTGACTTCCATTGATTGTCGTTCATTTTCCATGATAACTCTTGCCACACATTGTCCTGATCAAACTCATAACAATCCACACTGGTTCACTTCAACTCACATGAAATATTCCACGCTACAA ]
[+] EMBL CD149317 [ACCTTTGTTATTTTTAAATGTCATATTGATCATTTGTGAAGATCCTGCTAGTGGATTTGTTGTCACTTGGTGTAGTTGTATTGACGTGCTGACTTCCATTGATTGTCGCTCATTGTCCATGATAACTCTTGCCACACATTGTCCTGATCAAACTCATAACAATCCACACTGGCTCACTTCAACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTACTGTATCCCATATGTGTGAAATATCAAACACTAACATTCACATTACTATACACAGTCTGTAATCGTCAACATTTTCACCATTGAATTATTATGCGAAATTCTACAG ]
[-] EMBL CD149590 [ TGTATTGACGTGCTGACTTCCATTGATTGTCGTTCATTTTCCATGATAACTCCTGCCACACATTGTCCTGATCAAACTCATAACAATCCACACTGGTTCACTTCAACTCACATGAAATATTCCACGATACAAGTGAATTCCAATACTTGAACAGCTACTGTATCCCATATGTGTGAAATACCAAACAATAACATTCGCATTACTATACACAGTCTGTAGTCGTCAACATTTTCACCATTGAATTATTATGCGAAATTCTACTATGAACATCTGAACAATTGATGTCCAACAATCAATGATTCGTATTACTTCATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTAAACAATAGGAGTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATTTGTGTAATTAACTCC ]
[+] EMBL CD157248 [ ATAGTCGTTCATTTTCCATGATAACTCTTGCCACACATTGTCCTGATCAAACTCATAACAATCCACACTGGTTCACTTCAACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTACTGTATCCCATATGTGTGAAATATCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCACCATTGAATTATTATGCGAAATTCTACAGTGAACATCTGAACAATTGATGTTCAACAATCAATGATTCGTATCACTTCATTATTCAAGTCAACAATGTTCTGTAGGTTTGTCTATTTCGGTACACAATAGGACTACAACTATTGATAAACTGTT ]
[-] EMBL CD149569 [ GGTTCACTTCAACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTACTGTATCCCATATGTGTGAAATACCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCACCATTGAATTATTATGCGAAATTCTACTATGAACATCTGAACAATTGATGTCCAACAATCAATGATTCGTATTACTTCATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTAAACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATTTGTGTAATTAACTCCACCACCGATTCTCAGctg ]
[+] EMBL CD137211 [ TATCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCACCATTGAATTATTATGCGAAATTCTACAGTGAACATCTGAACAATTGATGTTCAACAATCAATGATTCGTATTACTTCATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATTTGTGTAATTAACTCCACCACCGATTCTCAGTTTACATATTCATCTCCCTCTCAATCCACATTCACTTGTCAACAGAATTATATTCACAACATCTCTATCACTGCATG TTCACATGACCGTTTCTTCACTATGATTAACGTTACTTTTAATACCATTCGTATNTGCATTATTATTGCTATTATCA ]
[+] EMBL CD136742 [ TATCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCACCATTGAATTATTATGCGAAATTCTACAGTGAACATCTGAACAATTGATGTTCAACAATCAATGATTCGTATTACTTCATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATTTGTGTAATTAACTCCACCACCGATTCTCAGTTTACATATTCATCTCCCTCTCAATCCACATTCACTTGTCAACAGAATTATATTCACAACATCTCTATCACTGCATG TTCACATGACCGTTTCTTCACTATGATTAACGTTACTTTTAATACCATTCGTATTTGCATTATTATTGCTATTATCA ]
[+] EMBL CD137171 [ TATCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCACCATTGAATTATTATGCGAAATTCTACAGTGAACATCTGAACAATTGATGTTCAACAATCAATGATTCGTATTACTTCATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATTTGTGTAATTAACTCCACCACCGATTCTCAGTTTACATATTCATCTCCCTCTCAATCCACATTCACTTGTCAACAGAATTATATTCGCAACATCTCTATCACTGCATG TTCACATGACCGTTTCTTCACTATGATTAACGTTACTTTTAATACCATTCGTATTTGCATTATTATTGCTATTATCA ]
[+] EMBL CD112403 [ TATCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCACCATTGAATTATTATGCGAAATTCTACAGTGAACATCTGAACAATTGATGTTCAACAATCAATGATTCGTATTACTTCATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATCTGTGTAA ]
[-] EMBL CD137037 [ ATCAAACACTAACATTCACATTACTATACACAGTTTGAAGTCGTCAACATTTTCACCATTGAATTATTATGCGAAATTCTACAGTGAACATCTGAACAATTGATGTTCAAC ATCAATGATTCGTATTACTTCATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATTTGTGTAATTAACTCCACCACCGATTCTCAGTTTACATATTCATCTCCCTCTCAATCCACATTCACTTGTCAACAGAATTATATTCACAACATCTCTATCACTGCATG TTCACATGACCGTTTCTTCACTATGATTAACGTTACTTTTAATACCATTCGTATTTGCATTATTATTGCTATTATCAT ]
[-] EMBL CD145581 [ CGTATTACTTCATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATTTGTGTAATTAACTCCACCACCGATTCTCAGTTTACATATTCATCTCCCTCTCAATCCACATTCACTTGTCAACAGAATTATATTCACAACATCTCTATCACTGCATG TTCACATGACCGTTTCTTCACTATGATTAACGTTACTTTTAATACCATTCGTATTTGCATTATTATTGCTATTATCATTATTATGACTATG]
[-] EMBL CD089785 [ CAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAGACGATGTC ]
[-] EMBL CD137080 [ TCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATTTGTGTAATCAACTCCACCACCGATTCTCAGTTTACATATTCATCTCCCTCTCAATCCACATTCACTTGCCAACAGAATTACATTCACAACATCTCTATCACTGCATGTTCCATTCACATGACCG ]
[-] EMBL CD137014 [ TCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATTTGTGT ATCAACTCCACCACCGATTCTCAGTTTACATATTCATCTCCCTCTCAATCCACATTCACTTGTCAACAGAATTACATTCACAACATCTCTATCACTGCATGTTCCATTCACATGACCG ]
[-] EMBL CD136512 [ TCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATTTGTGTAATCAACTCCACCACCGATTCTCAGTTTACATATTCATCTCCCTCTCAATCCACATTCACTTGTCAACAGAATTACATTCACAACATCTCTATCACTGCATGTTCTATTCACATGACCGTTTCTTCACTATGATTAACGTTACTTTg ]
consensusID : consensus_10985#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 536 fasta sequence
[GACTGTTCTATTTGAATTTGAAATTGAACAATTGTGAGGAATCTGCTCGTGGATTGGTTATCATGTGGTGAAGTTGTATTGACGTACTGACTTCCATTGATTGTCGTTCATTTTCCAAGATAATTCATGTCAGAGTCCTGATGACACTCATATCAATCCACACCGGTTCATTTCAACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTACTGTATTCCATATGTGTGAAATACCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAATTCTACTGTAAACATCTGAACAATTGATGTCCAACAATCAAATGATTCGTTCTACTTAATTATTGAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTACTCTATTGATAAAATGTTGATTTTCAGCAATGTCGCACCTCATTCGATTTG-TGTAATCAACTCCACCACCGATTCTCAGTTTACATATTCATCTCC]
[+] EMBL CD169342 [GACTGTTCTATTTGAATTTGAAATTGAACAATTGTGAGGAATCTGCTCGTGGATTGGTTATCATGTGGTGAAGTTGTATTGACGTACTGACTTCCATTGATTGTCGTTCATTTTCCAAGATAATTCATGTCAGAGTCCTGATGACACTCATATCAATCCACACCGGTTCATTTCAACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTACTGTATTCCATATGTGTGAAATACCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAATTCTACTGTAAACATCTGAACAATTGATGTCCAACAATCAAATGATTCGTTCTACTTAATTATTGAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTACTCTATTGATAAAACGTTGATTTTCAGCAATGTCGCACCTCATTCGATTTG TGTAATCAACTCCACCACCGATTCTCAGTTTACATA ]
[+] EMBL CD168917 [GACTGTTCTATTTGAATTTGAAATTGAACAATTGTGAGGAATCTGCTCGTGGATTGGTTATCATGTGGTGAAGTTGTATTGACGTACTGACTTCCATTGATTGTCGTTCATTTTCCAAGATAATTCATGTCAGAGTCCCGATGACACTCATATCAATCCACACCGGTTCATTTCAACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTACTGTATTCCATATGTGTGAAATACCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAATTCTACTGTAAACATCTGAACAATTGATGTCCAACAATCAAATGATTCGTTCTACTTAATTATTGAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTACTCTATTGATAAAATGTTGATTTTCAGCAATGTCGCACCTCATTCGATTTG TGTAATCAACTCCACCACCGATTCTCAGTTTACATA ]
[+] EMBL CD169512 [GACTGTTCTATTTGAATTTGAAATTGAACAATTGTGAGGAATCTGCTCGTGGATTGGTTATCATGTGGTGAAGTTGTATTGACGTACTGACTTCCATTGATTGTCGTTCATTTTCCAAGATAATTCATGTCAGAGTCCTGATGACACTCATATCAATCCACACCGGTTCATTTCAACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTACTGTATTCCATATGTGTGAAATACCAAACACTAACATTCACATTACTAAACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAATTCTACTGTAAACATCTGAACAATTGATGTCCAACAATCAAATGATTCGTTCTACTTAATTATTGAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTACTCTATTGATAAAATGTTGATTTTCAGCAATGTCGCACCTCATTCGATTTG TGTAATCAACTCCACCACCGATTCTCAGTTTACATA ]
[+] EMBL CD169343 [GACTGTTCTATTTGAATTTGAAATTGAACAATTGTGAGGAATCTGCTCGTGGATTGGTTATCATGTGGTGAAGTTGTATTGACGTACTGACTTCCATTGATTGTCGTTCATTTTCCAAGATAATTCATGTCAGAGTCCTGATGACACTCATATCAATCCACACCGGTTCATTTCAACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTACTGTATTCCATATGTGTGAAATACCAAACACTAACATTCACATTACTATACACAGTCTGTAGGCGTCAACATTTTCATCATCGAATTACTATGCGAAATTCTACTGTAAACATCTGAACAATTGATGTCCAACAATCAAATGATTC ]
[-] EMBL CD168878 [ CATTCATATCAATCCACACCGGTTCATTTCAACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTACTGTATTCCATATGTGTGAAATACCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAATTTTACTGTAAACATCTGAACAATTGATGTCCAACAATCAAATGATTCGTTCTACTTAATTATTGAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTACTCTATTGATAAAATGTTGATTTTCAGCAATGTCGCACCTCATTCGATTTG TGTAATCAAGTCCACCACCGATTCTCAGTTTACATAT ]
[-] EMBL CD150299 [ CTTGAACAGCTAGTGTATTCCATATGTGTGAAATACCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTACGCGAAATTCTACTGTAAACATATGAACAATTGATGTCCAACAATCAAATGATTCGTTCCACTTAATTATTGAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAACCGGAGTACTCTATTGATAAAATGTTGATTTTCAGCAATGTCGCACCTCATTCGATTTGAGGTAACTATATCCACCACCGATTCTCAGTTTACATATTCATCTCC]
consensusID : consensus_10985#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 134 fasta sequence
[GACACGCGTTGAAGTTGTATGGACGTGCTGACTTCCATTGATTGTTGTTTATTTTCCTTGATAACTCTTGCCACACAGTGTCCTGATTAAACTCATTCAATCGAATGGAAATTTGTACGAGGGACGTTATTTGA]
[+] EMBL CD195323 [GACACGCGTTGAAGTTGTATGGACGTGCTGACTTCCATTGATTGTTGTTTATTTTCCTTGATAACTCTTGCCACACAGTGTCCTGATTAAACTCATTCAATCGAATGGAAATTTGTACGAGGGACGTTATTTGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10985#0 CTGAATCAGACAGCGTCTGACACCGTCACCACGAATCTCGAATGTAGTGACATCAGCATA 60
consensus_10985#3 ------------------------------------------------------------
consensus_10985#1 ------------------------------------------------------------
consensus_10985#2 ------------------------------------------------------------
consensus_10985#0 GTAATATTTCAACTGGATTGTTGCACGAATAACCTAAAATGATGCACACATTTGCATGAT 120
consensus_10985#3 ------------------------------------------------------------
consensus_10985#1 ------------------------------------------------------------
consensus_10985#2 ------------------------------------------------------------
consensus_10985#0 TGACTCTGTTGGAACATGTATCCAAGTCACATGAGACGAATCAGTTTCATTCAAACTACC 180
consensus_10985#3 ------------------------------------------------------------
consensus_10985#1 ------------------------------------------------------------
consensus_10985#2 ------------------------------------------------------------
consensus_10985#0 AATACAAACCGGATTTGGCTGATTGACGCGAATGATCTGTGAGTAGTAATAATACTGACA 240
consensus_10985#3 ------------------------------------------------------------
consensus_10985#1 ------------------------------------------------------------
consensus_10985#2 ------------------------------------------------------------
consensus_10985#0 ATAGGTATGTGTATTAACATCTGACTGATCACTTTCATATCGATATGAATCACTTTCGAG 300
consensus_10985#3 ------------------------------------------------------------
consensus_10985#1 ------------------------------------------------------------
consensus_10985#2 ------------------------------------------------------------
consensus_10985#0 AAATACGCTTTCTTCATTCTCCACATCAGGTTGTTTACAATTGTCATTGCAGTTGAAGAA 360
consensus_10985#3 ------------------------------------------------------------
consensus_10985#1 ------------------------------------------------------------
consensus_10985#2 ------------------------------------------------------------
consensus_10985#0 TTTGTAGGGCCAAACGAAGATCAGATAGATTGATATCCAGCTATAGACTAGTCGAAAATG 420
consensus_10985#3 ------------------------------------------------------------
consensus_10985#1 ------------------------------------------------------------
consensus_10985#2 ------------------------------------------------------------
consensus_10985#0 TATATCTCGAATGGTTGAAATGAACAAAACACAGTTATCTCATCTCATTCAATCGAATGG 480
consensus_10985#3 ------------------------------------------------------------
consensus_10985#1 ------------------------------------------------------------
consensus_10985#2 ------------------------------------------------------------
consensus_10985#0 AAATTTGTACGACACACTTATTTGATGTATAGTGTTACTAGATAATCACCTGTTAAGGAA 540
consensus_10985#3 ------------------------------------------------------------
consensus_10985#1 ------------------------------------------------------------
consensus_10985#2 ------------------------------------------------------------
consensus_10985#0 AGAGGCGACACACAGTCAGAGGAATGCCTACGTCTGTTCTTTCTGAATGTGTAATTGATC 600
consensus_10985#3 ------------------------------------------------------------
consensus_10985#1 -----------------------------ACGTTTGTTATTTTTAAATGTCATATTGATC 31
consensus_10985#2 -------------------------------GACTGTTCTATTTGAATTTGAAATTGAAC 29
consensus_10985#0 ATTTGTGAGGATTTTGCAAGTGGATTTGTTGACACGCGTTGAAGTTGTATGGACGTGCTG 660
consensus_10985#3 ------------------------------GACACGCGTTGAAGTTGTATGGACGTGCTG 30
consensus_10985#1 ATTTGTGAAGATCCTGCTAGTGGATTTGTTGTCACTTGGTGTAGTTGTATTGACGTGCTG 91
consensus_10985#2 AATTGTGAGGAATCTGCTCGTGGATTGGTTATCATGTGGTGAAGTTGTATTGACGTACTG 89
** * ** ******** ***** ***
consensus_10985#0 ACTTCCATTGATTGTTGTTTATTTTCCTTGATAACTCTTGCCACACAGTGTCCTGATTAA 720
consensus_10985#3 ACTTCCATTGATTGTTGTTTATTTTCCTTGATAACTCTTGCCACACAGTGTCCTGATTAA 90
consensus_10985#1 ACTTCCATTGATTGTCGTTCATTTTCCATGATAACTCTTGCCACACATTGTCCTGATCAA 151
consensus_10985#2 ACTTCCATTGATTGTCGTTCATTTTCCAAGATAATTCATGTCAGA----GTCCTGATGAC 145
*************** *** ******* ***** ** ** ** * ******** *
consensus_10985#0 ACTCATAACAATCCACATCGGTTTAATTCTACTCACATGAAATATTCCACGCTACAAGTG 780
consensus_10985#3 ACTCATT-CAATCGAATGGAAATTTGTACGAGGGACGT----TATTTGA----------- 134
consensus_10985#1 ACTCATAACAATCCACACTGGTTCACTTCAACTCACATGAAATATTCCACGCTACAAGTG 211
consensus_10985#2 ACTCATATCAATCCACACCGGTTCATTTCAACTCACATGAAATATTCCACGCTACAAGTG 205
****** ***** * * * * * ** * **** *
consensus_10985#0 AATTCCAATACTTGAACAGCTGCTGTATTCCATATGTGTGAAATGACAAACACTTACATT 840
consensus_10985#3 ------------------------------------------------------------
consensus_10985#1 AATTCCAATACTTGAACAGCTACTGTATCCCATATGTGTGAAATATCAAACACTAACATT 271
consensus_10985#2 AATTCCAATACTTGAACAGCTACTGTATTCCATATGTGTGAAATACCAAACACTAACATT 265
consensus_10985#0 CACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAA 900
consensus_10985#3 ------------------------------------------------------------
consensus_10985#1 CACATTACTATACACAGTCTGTAGTCGTCAACATTTTCACCATTGAATTATTATGCGAAA 331
consensus_10985#2 CACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAA 325
consensus_10985#0 TTCTACTATGAACATCTGAACAATTGATGTCCAACAATCAAATGATTCGTGTTAATTAAT 960
consensus_10985#3 ------------------------------------------------------------
consensus_10985#1 TTCTACAGTGAACATCTGAACAATTGATGTTCAACAATCAA-TGATTCGTATTACTTCAT 390
consensus_10985#2 TTCTACTGTAAACATCTGAACAATTGATGTCCAACAATCAAATGATTCGTTCTACTTAAT 385
consensus_10985#0 TATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAACCGGACTACACTA 1020
consensus_10985#3 ------------------------------------------------------------
consensus_10985#1 TATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTACACTA 450
consensus_10985#2 TATTGAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTACTCTA 445
consensus_10985#0 TTGATAAACTGGTGATGCTCTATACT-TCGATCTTTTGTACACAATCATTATGAACTTGT 1079
consensus_10985#3 ------------------------------------------------------------
consensus_10985#1 TTGATAAACTGTTGATTTCCAGCAATGTCGCACCTCATTCGATTTGTGTAATTAACTCCA 510
consensus_10985#2 TTGATAAAATGTTGATTTTCAGCAATGTCGCACCTCATTCGATTTGTGTAATCAACTCCA 505
consensus_10985#0 CATTGTANAGTGTGATGACCAAAGTATCGAGAAGAGATTCT------------------- 1120
consensus_10985#3 ------------------------------------------------------------
consensus_10985#1 CCACCGATTCTCAGTTTACATATTCATCTCCCTCTCAATCCACATTCACTTGTCAACAGA 570
consensus_10985#2 CCACCGATTCTCAGTTTACATATTCATCTCC----------------------------- 536
consensus_10985#0 ------------------------------------------------------------
consensus_10985#3 ------------------------------------------------------------
consensus_10985#1 ATTATATTCACAACATCTCTATCACTGCATGTTCACATGACCGTTTCTTCACTATGATTA 630
consensus_10985#2 ------------------------------------------------------------
consensus_10985#0 ------------------------------------------------------------
consensus_10985#3 ------------------------------------------------------------
consensus_10985#1 ACGTTACTTTTAATACCATTCGTATTTGCATTATTATTGCTATTATCATTATTATGACTA 690
consensus_10985#2 ------------------------------------------------------------
consensus_10985#0 --
consensus_10985#3 --
consensus_10985#1 TG 692
consensus_10985#2 --
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||