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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10993#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 1747 fasta sequence
[AGGGCCTTCAGAATGGAATGTATTGGGATGATGTCACAGGTGCTGAAGATCGCATAGAAGGATTCACATAACTTTTCTTCGTTCCTGGTCGATTTACTATTGATGGAGACATTTTTGTAGGACTTGGTGAAGATGTTGAACAAGGAAAGACTGATTCAGGTGTTCTATTTGTCTCCAAATCTGAATATGTAGTTGAAATATTCGGTTCAGAATTGATGGTGGGCTTTGTACACAAACACGAGTCATCTCCATCCGATAATACAGGTGAAGGGACGTTTAAATTAGAGATTGTAAGCGTGGACACTACAGGAACATAAGGACTTCCAGTCATCCCCATTCCAACATATGGTTGTGGAGAACAGTGCATTCGAATCAAACTTGAAGGACTGTACACAGTCGAACCAGCTGCAGCTCGAGTAACAATATTACCTGGTCCCAAACGAACTATATCTGTGGCCGCTATGTTGTATGTAACATTTGTAGAAGATAAAGATGGGGTATTCGTTGGACTAGGAACATTTGAACATGAAAAGAAAGAACTTGATTGGGAATGAGATGACACAGTATGTTTCACGTTGGTGGGAGACGTACAAGCAGATACCGATTGATAAGGCTTGGTTGAAGGAATACTTTTTTCGACCGGGTTCGAATCCGAGTTTTCTGACACAAGATTTGGTGAACCAGTGGCGAAAACAAGTCCACCAACACGAGTCATTTGAGCAGCAAGGGAAACACGACTACTGTTAAGATGATGCCACGTGAGTAGGTTATCACGAGATGTGGTGCACTGCGATAGACGAGGATTGCAATGAGCAGTATGGGTAGGAGAAATAGGAACATGTGATTGGTCATGCGCAGCAGTTGTACCGGGACTTCGAACAAGGTTAACAGATTGGCTAGAACTATAGCATACAGGTCTTCTAGTCCCTCGTGGAGAAACACGACAAACGTGAGGGTAAGGAGAAGTAGGATGAGTGGTTGAAAAGTTCGTATTCCTTGAGTGTGAAAATCTGTAGTTGGGATCTGGTACCAAACGTTTCTGATTACAGCTGGTGGATGATTGATATAAATAGTGCCCAAGTTGATTAGTTTCTGAAGATCCTATTTGAAGCAGTTGATCAGTTGTAAGCCCACCATCGATAGCTAGTCTTGCAACTGCACCTAATTGAGACTCGCATGAACCAATAACAGGAGAACAGGTAGAAGTGTGCTTTGGTTTGTAATTTATTTGCGGACTAGGTTTTTCGAGGGAGCTGTTCTTTACATTAACATTGCGTTGTGACTTCGCAGTGTCTGGAAATGAGTGATATGCCTGTCTATGTATTATTCGCANATTCTCATGTTCTGATTTGTCTGATGAGAGTTCAGTAACTTTATTTATTGTTTGACAAATTGTTTTGTTACCAACTTCTACTGGGAAGGAACAACATATTTCACCACCATTATCTATCACTTTCAGTTTCAGTTCACCGGAACTGGTAGAGTCATTAATTAAAGACTTCAATTCATCGAGTTTTAGTCCACTAGTAGGGATCCTGTCGATAGACGTTACAAGGTCCCCAACTTTTAATCCGGCTGATAATATTGAATTCGATGGAGAGACCGAAATTACACGACTGTACTGGGAAACGACATATGACTGATTAATCTCGGGAATATTCTTAGCAAAGGCGTCTTAAATATAACGGACGTTTGCGCTTTTATAAATTAAACGCAGTGTTCTGCGAGACGGGATTATTTCAGCCAT]
[+] EMBL CD085950 [AGGGCCTTCAGAATGGAATGTATTGGGATGATGTCACAGGTGCTGAAGATCGCATAGAAGGATTCACATAACTTTTCTTCGTTCCTGGTCGATTTACTATTGATGGAGACATTTTTGTAGGACTTGGTGAAGATGTTGAACAAGGAAAGACTGATTCAGGTGTTCTATTTGTCTCCAAATCTGAATATGTAGTTGAAATATTCGGTTCAGAATTGATGGTGGGCTTTGTACACAAACACGAGTCATCTCCATCCGATAATACAGGTGAAGGGACGTTTAAATTAGAGATTGTAAGCGTGGACACTACAGGAACATAAGGACTTCCAGTCATCCCCATTCCAACATATGGTTGTGGAGAACAGTGCATTCGAATCAAACTTGAAGGACTGTACACAGTCGAACCAGCTGCAGCTCGAGTAACAATATTACCTGGTCCCAAACGAACTATATCTGTGGCCGCTATGTTGTATGTAACATTTGTAGAAGATAAAGATGGGGTATTCGTT ]
[+] EMBL CD061679 [ tcGGGACGTTTAAATTAGAGATTGTAAGCGTGGACACTACAGGAACATAAGGACTTCCAGTCATCCCCATTCCAACATATGGTTGTGGAGAACAGTGCATTCGAATCAAACTTGAAGGACTGTACACAGTCGAACCAGCTGCAGCTCGAGTAACAATATTACCTGGTCCCAAACGAACTATATCTGTGGCCGCTATGTTGTATGTAACATTTGTAGAAGATAAAGATGGGGTATTCGTTGGACTAGGAACATTTGAACATGAAAAGAAAGAACTTGATTGGGAATGAGATGACACAGTATGTTTCACGTTGGTGGGAGACGTACAAGCAGATACCGATTGATAAGGCTTGGTTGAAGGAATACTTTTTTCGACCGGGTTCGAATCCGAGTTTTCTGACACAAGATTTGGTGAACCAGTGGCGAAAACAAGTCCACCAACACGAGTCATTTGAGCAGCAAGGGAAACACGACTACTGTTAAGATGATGCCACGTGAGTAGGTTATCACGA ]
[-] EMBL CD085886 [ TTTGAACATGAAAAGAAAGAACTTGATTGGGAATGAGATGACACAGTATGTTTCACGTTGGTGGGAGACGTACAAGCAGATACCGATTGATAAGGCTTGGTTGAAGGAATACTTTTTTCGACCGGGTTCGAATCCGAGTTTTCTGACACAAGATTTGGTGAACCAGTGGCGAAAACAAGTCCACCAACACGAGTCATTTGAGCAGCAAGGGAAACACGACTACTGTTAAGATGATGCCACGTGAGTAGGTTATCACGAGATGTGGTGCACTGCGATAGACGAGGATTGCAATGAGCAGTATGGGTAGGAGAAATAGGAACATGTGATTGGTCATGCGCAGCAGTTGTACCGGGACTTCGAACAAGGTTAACAGATTGGCTAGAACTATA ]
[-] EMBL CD085948 [ GTACAAGCAGATACCGATTGATAAGGCTTGGTTGAAGGAATACTTTTTTCGACCGGGTTCGAATCCGAGTTTTCTGACACAAGATTTGGTGAACCAGTGGCGAAAACAAGTCCACCAACACGAGTCATTTGAGCAGCAAGGGAAACACGACTACTGTTAAGATGATGCCACGTGAGTAGGTTATCACGAGATGTGGTGCACTGCGATAGACGAGGATTGCAATGAGCAGTATGGGTAGGAGAAATAGGAACATGTGATCGGTCATGCGCAGCAGTTGTACCGGGACTTCGAACAAGGTTAACAGATTGGCTAGAACTATA ]
[+] EMBL CD200645 [ AGCAGATACCGATTGATAAGGCTTGGTTGAAGGAATACTTTTTTCGACCGGGTTCGAATCCGAGTTTTCTGACACAAGATTTGGTGAACCAGTGGCGAAAACAAGTCCACCAACACGAGTCATTTGAGCAGCAAGGGAAACACGACTACTGTTAAGATGATGCCACGTGAGTAGGTTATCACGAGATGTGGTGCACTGCGATAGACGAGGATTGCAATGAGCAGTATGGGTAGGAGAAATAGGAACATGTGATTGGTCATGCGCAGCAGTTGTACCGGGACTTCGAACAAGGTTAACAGATTGGCTAGAACTATAGCATACAGGTCTTCTAGTCCCTCGTGGAGAAACACGACAAACGTGAGGGTAAGGAGAAGTAGGATGAGTGGTTGAAAAGTTCGTATTCCTTGAGTGTGAAAATCTGTAGTTGGGATCTGGTACCAAACGTTTCTGATTACAGCTGGTGGATGATTGAT ]
[-] EMBL CD200708 [ GCAGATACCGATTGATAAGGCTTGGTTGAAGGAATACTTTTNTCGACCGGGTTCGAATCCGAGTTTTCTGACACAAGATTTGGTGAACCAGTGGCGAAAACAAGTCCACCAACACGAGTCATTTGAGCAGCAAGGGAAACACGACTACTGTTAAGATGATGCCACGTGAGTAGGTTATCACGAGATGTGGTGCACTGCGATAGACGAGGATTGCAATGAGCAGTATGGGTAGGAGAAATAGGAACATGTGATTGGTCATGCGCAGCAGTTGTACCGGGACTTCGAACAAGGTTAACAGATTGGCTAGAACTATAGCATACAGGTCTTCTAGTCCCTCGTGGAGAAACACGACAAACGTGAGGGTAAGGAGAAGTAGGATGAGTGGTTGAAAAGTTCGTATTCCTTGAGTGTGAAAATCTGTAGTTGGGATCTGGTACCAAACGTTTCTGATTACAGCTGGTGGATGATTGATA ]
[-] EMBL CD091221 [ TTTCGACCGGGTTCGAATCCGAGTTTTCTGACACAAGATTTGGTGAACCAGTGGCGAAAACAAGTCCACCAACACGAGTCATTTGAGCAGCAAGGGAAACACGACTACTGTTAAGATGATGCCACGTGAGTAGGTTATCACGAGATGTGGTGCACTGCGATAGACGAGGATTGCAATGAGCAGTATGGGTAGGAGAAATAGGAACATGTGATTGGTCATGCGCAGCAGTTGTACCGGGACTTCGAACAAGGTTAACAGATTGGCTAGAACTATAGCATACAGGTCTTCTAGTCCCTCGTGGAGAAACACGACAAACGTGAGGGTAAGGAGAAGTAGGATGAGTGGTTGAAAAGTTCGTATTCCTTGAGTGTGAAAATCTGTAGTTGGGATCTGGTACCAAACGTTTCTGATTACAGC ]
[+] EMBL CD094760 [ GATTGCAATGAGCAGTATGGGTAGGAGAAATAGGAACATGTGATTGGTCATGCGCAGCAGTTGTACCGGGACTTCGAACAAGGTTAACAGATTGGCTAGAACTATAGCATACAGGTCTTCTAGTCCCTCGTGGAGAAACACGACAAACGTGAGGGTAAGGAGAAGTAGGATGAGTGGTTGAAAAGTTCGTATTCCTTGAGTGTGAAAATCTGTAGTTGGGATCTGGTACCAAACGTTTCTGATTACAGCTGGTGGATGATTGATATAAATAGTGCCCAAGTTGATTAGTTTCTGAAGATCCTATTTGAAGCAGTTGATCAGTTGTAAGCCCACCATCGATAGCTAGTCTTGCAACTGCACCTAATTGAGACTCGCATGAACCAATAACAGGAGAACAGGTAGAAGTGTGCTTTGGTTTGTAATTTATTTGCGGACTAGG TTTTCGAGAGGGAAGTTn ]
[+] EMBL CD065244 [ aATAGGAAGGAGAAATAGGAACATGTGATTGGTCATGCGCAGCAGTTGTACCGGGACTTCGAACAAGGTTAACAGATTGGCTAGAACTATAGCATACAGGTCTTCTAGTCCCTCGTGGAGAAACACGACAAACGTGAGGGTAAGGAGAAGTAGGATGAGTGGTTGAAAAGTTCGTATTCCTTGAGTGTGAAAATCTGTAGTTGGGATCTGGTACCAAACGTTTCTGATTACTGCTGGTGGATGATTGATATAAATAGTGCCCAAGTTGATTAGTTTCTGAAGATCCTATTTGAAGCAGTTGATCAGTTGTAAGCCCACCATCGATAGCTAGTCTTGCAACTGCACCTAATTGAGACTCGCATGAACCAATAACAGGAGAACAGGTAGAAGTGTGCTTTGGTTTGTAATTTATTTGCGGACTAGGTTTTTCGAGGGAGCTGTTCTTTACATTAACATTGCGTTGTGACTTCGCAGTGTCTGGAAATGAGTGATATGCCTGTCTATGTATTATTCGCANATTCTCATGTTCTGATTTGTCTGATGAGAGTTCAGTAACTTTATTTATTGTTTGACA ]
[-] EMBL CD126655 [ GGGTAGGAGAAATAGGAACATGTGATTGGTCATGCGCAGCAGTTGTACCGGGACTTCGAACAAGGTTAACAGATTGGCTAGAACTATAGCATACAGGTCTTCTAGTCCCTCGTGGAGAAACACGACAAACGTGAGGGTAAGGAGAAGTAGGATGAGTGGTTGAAAAGTTCGTATTCCTTGAGTGTGAAAATCTGTAGTTGGGATCTGGTACCAAACGTTTCTGATTACAGCTGGTGGATGATTGATATAAATAGTGCCCAAGTTGATTAGTTTCTGAAGATCCTATTTGAAGCAGTTGATCAGTTGTAAGCC CCATCGA ]
[+] EMBL CD129384 [ TGATTGGTCATGCGCAGCAGTTGTACCGGGACTTCGAACAAGGTTAACAGATTGGCTAGAACTATAGCATACAGGTCTTCTAGTCCCTCGTGGAGAAACACGACAAACGTGAGGGTAAGGAGAAGTAGGATGAGTGGTTGAAAAGTTCGTATTCCTTGAGTGTGAAAATCTGTAGTTGGGATCTGGTACCAAACGTTTCTGATTACAGCTGGTGGATGATTGATATAAATAGTGCCCAAGTTGATTAG ]
[+] EMBL CD095225 [ TACCGGGACTTCGAACAAGGTTAACAGGTTGGCTAGAACTATAGCATACAGGTCTTCTAGTCCCTCGTGGAGAAACACGACAAACGTGAGGGTAAGGAGAAGTAGGATGAGTGGTTGAAAAGTTCGTATTCCTTGAGTGTGAAAATCTGTAGTTGGGATCTGGTACCAAACGTTTCTGATTACAGCTGGTGGATGATTGATATAAATAGTGCCCAAGTTGATTAGTTTCTGAAGATCCTATTTGAAGCAGTTGATCAGTTGTAAGCCCACCATCGATAGCTAGTCTTGCAACTGCACCT ]
[+] EMBL CD094857 [ TACCGGGACTTCGAACAAGGTTAACAGATTGGCTAGAACTATAGCATACAGGTCTTCTAGTCCCTCGTGGAGAAACACGACAAACGTGAGGGTAAGGAGAAGTAGGATGAGTGGTTGAAAAGTTCGTATTCCTTGAGTGTGAAAATCTGTAGTTGGGATCTGGTACCAAACGTTTCTGATTACAGCTGGTGGATGATTGATATAAATAGTGCCCAAGTTGATTAGTTTCTGAAGATCCTATTTGAAGCAGTTGATCAGTTGTAAGCCCACCATCGATAGCTAGTCTTGCAACTGCACCT ]
[+] EMBL CD095078 [ TACCGGGACTTCGAACAAGGTTAACAGATTGGCTAGAACTATAGCATACAGGTCTTCTAGTCCCTCGTGGAGAAACACGACAAACGTGAGGGTAAGGAGAAGTAGGATGAGTGGTTGAAAAGTTCGTATTCCTTGAGTGTGAAAATCTGTAGTTGGGATCTGGTACCAAACGTTTCTGATTACAGCTGGTGGATGATTGATATAAATAGTGCCCAAGTTGATTAGTTTCTGAAGATCCTATTTGAAGCAGTTGATCAGTTGTAAGCCCACCATCGATAGCTAGTCTTGCAACTGCACCT ]
[+] EMBL CD095175 [ TACCGGGACTTCGAACAAGGTTAACAGATTGGCTAGAACTATAGCATACAGGTCTTCTAGTCCCTCGTGGAGAAACACGACAAACGTGAGGGTAAGGAGAAGTAGGATGAGTGGTTGAAAAGTTCGTATTCCTTGAGTGTGAAAATCTGTAGTTGGGATCTGGTACCAAACGTTTCTGATTACAGCTGGTGGATGATTGATATAAATAGTGCCCAAGTTGATTAGTTTCTGAAGATCCTATTTGAAGCAGTTGATCAGTTGTAAGCCCACCATCGATAGCTAGTCTTGCAACTGCACCT ]
[+] EMBL CD095272 [ TACCGGGACTTCGAACAAGGTTAACAGATTGGCTAGAACTATAGCATACAGGTCTTCTAGTCCCTCGTGGAGAAACACGACAAACGTGAGGGTAAGGAGAAGTAGGATGAGTGGTTGAAAAGTTCGTATTCCTTGAGTGTGAAAATCTGTAGTTGGGATCTGGTACCAAACGTTTCTGATTACAGCTGGTGGATGATTGATATAAATAGTGCCCAAGTTGATTAGTTTCTGAAGATCCTATTTGAAGCAGTTGATCAGTTGTAAGCCCACCATCGATAGCTAGTCTTGCAACTGCACCT ]
[+] EMBL CD095273 [ TACCGGGACTTCGAACAAGGTTAACAGATTGGCTAGAACTATAGCATACAGGTCTTCTAGTCCCTCGTGGAGAAACACGACAAACGTGAGGGTAAGGAGAAGTAGGGTGAGTGGTTGAAAAGTTCGTATTCCTTGAGTGTGAAAATCTGTAGTTGGGATCTGGTACCAAACGTTTCTGATTACAGCTGGTGGATGATTGATATAAATAGTGCCCAAGTTGATTAGTTTCTGAAGATCCTATTTGAAGCAGTTGATCAGTTGTAAGCCCACCATCGATAGCTAGTCTTGCAACTGCACCT ]
[-] EMBL CD094850 [ ACCGGGACTTCGAACAAGGTTAACAGATTGGCTAGAACTATAGCATACAGGTCTTCTAGTCCCTCGTGGAGAAACACGACAAACGTGAGGGTAAGGAGAAGTAGGATGAGTGGTTGAAAAGTTCGTATTCCTTGAGTGTGAAAATCTGTAGTTGGGATCTGGTACCAAACGTTTCTGATTACAGCTGGTGGATGATTGATATAAATAGTGCCCAAGTTGATTAGTTTCTGAAGATCCTATTTGAAGCAGTTGATCAGTTGTAAGCCCACCATCGATAGCTAGTCTTGCAACTGCACCTA ]
[-] EMBL CD085697 [ ACCGGGACTTCGAACAAGGTTAACAGATTGGCTAGAACTATAGCATACAGGTCTTCTAGTCCCTCGTGGAGAAACACGACAAACGTGAGGGTAAGGAGAAGTAGGATGAGTGGTTGAAAAGTTCGTATTCCTTGAGTGTGAAAATCTGTAGTTGGGATCTGGTACCAAACGTTTCTGATTACAGCTGGTGGATGATTGATATAAATAGTGCCCAAGTTGATTAGTTTCTGAAGATCCTATTTGAAGCAGTTGATCAGTTGTAAGCCCACCATCGATAGCTAGTCTTGCAACTGCACCTA ]
[-] EMBL CD094823 [ ACCGGGACTTCGAACAAGGTTAACAGATTGGCTAGAACTATAGCATACAGGTCTTCTAGTCCCTCGTGGAGAAACACGACAAACGTGAGGGTAAGGAGAAGTAGGATGAGTGGTTGAAAAGTTCGTATTCCTTGAGTGTGAAAATCTGTAGTTGGGATCTGGTACCAAACGTTTCTGATTACAGCTGGTGGATGATTGATATAAATAGTGCCCAAGTTGATTAGTTTCTGAAGATCCTATTTGAAGCAGTTGATCAGTTGTAAGCCCACCGTCGATAGCTAGTCTTGCAACTGCACCTA ]
[-] EMBL CD095048 [ ACAGATTGGCTAGAACTATAGCATACAGGTCTTCTAGTCCCTCGTGGAGAAACACGACAAACGTGAGGGTAAGGAGAAGTAGGATGAGTGGTTGAAAAGTTCGTATTCCTTGAGTGTGAAAATCTGTAGTTGGGATCTGGTACCAAACGTTTCTGATTACAGCTGGTGGATGATTGATATAAATAGTGCCCAAGTTGATTAGTTTCTGAAGACCCTACTTGAAGCAGTTGATCAGTTGTAAGCCCACCATCGATAGCTAGTCTTGCAACTGCACCTA ]
[+] EMBL CD155048 [ TTCTGAAGATCCTATTTGAAGCAGTTGATCAGTTGTAAGCCCACCATCGATAGCTAGTCTTGCAACTGCACCTAATTGAGACTCGCATGAACCAATAACAGGAGAACAGGTAGAAGTGTGCTTTGGTTTGTAATTTATTTGCGGACTAGGTTTTTCGAGGGAGCTGTTCTTTACATTAACATTGCGTTGTGACTTCG ]
[-] EMBL CD112351 [ GACTTCGCAGTGTCTGGAAATGAGCGATATGCCTGTCTATGTATTATTCGCAAATTCTCATGTTCTGA TTGTCTGATGAGAGTTCAGTAACTTTATTTATTGTTTGACAAATTGTTTTGTTACCAACTTCTACTGGGAAGGAACAACATATTTCACCACCATTATCTATCACTTTCAGTTTCAGTTCACCGGAACTGGTAGAGTCATTAATTAAAGACTTCAATTCATCGAGTTTTAGTCCACTAGTAGGGATCCTGTCGATAGACGTTACAAGGTCCCCAACTTTTAATCCGGCTGATAATATTGAATTCGATGGAGAGACCGAAATTACACGACTGTACTGGGAAACGACATATGACTGATTAATCTCGGGAATATTCTTAGCAAAGGCGTCTTAAATATAACGGACGTTTGCGCTTTTATAAATTAAACGCAGTGTTCTGCGAGACGGGATTATTTCAGCCAT]
consensusID : consensus_10993#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 532 fasta sequence
[CTGCATTATGGGAGGGCGCACGATTCGAGTCTGTTTTCTGAGGATGTTTCGATG-ATTAGTTCGGATTATTGTCCATGACTTCTTTATGAATTCAAATGCCTAACGCATAAACCTTTCAGATCAAATATTTTAGGTACAATTTTGTAAATAATTTTACGACTCTAAAACAATGTTTCTCAATTTATGATGCTGTGATCACAAGTGGCTTACCAACCTAACAAATGAGACTAAAAAGCATGTGTGGATACCTCTTTTTGTTACATCTTCATTAAAAACTTAATGAGACCATGATATGCAGAAAATCTCATCCTAAATATCTAAATGGTGATTCGTATGTCAGGTTCTTTACCGAAATGGTGTAGATTATTTTCATTATTTCTCATTTAAAGTATGGTAGATTCGGCTTTAAAGGTAGTTGTTGGTGATGGAGAGTTTGTTCTTGACGAACCAGATGTCGTTTCCCAGTACAGTCGTGTAATTTCGGTCTCTCCATCGAATTCAATATTATCAGCCGGATTAAAAGTTGGGGACC]
[+] EMBL CD094617 [CTGCATTATGGGAGGGCGCACGATTCGAGTCTGTTTTCTGAGGATGTTTCGATG ATTAGTTCGGATTATTGTCCATGACTTCTTTATGAATTCAAATGCCTAACGCATAAACCTTTCAGATCAAATATTTTAGGTACAATTTTGTAAATAATTTTACGACTCTAAAACAATGTTTCTCAATTTATGATGCTGTGATCACAAGTGGCTTACCAACCTAACAAATGAGACTAAAAAGCATGTGTGGATACCTCTTTTTGTTACATCTTCATTAAAAACTTAATGAGACCATGATATGCAGAAAATCTCATCCTAAATATCTAAATGGTGATTCGTATGTCAGGTTCTTTACCGAAATGGTGTAGATTATTTTCATTATTTCTCATTTAAAGTATGGTAGATTCGGCTTTAAAGGTAGTTGTTGGTGATGGAGAGTTTGTTCTTGACGAACCAGATGTCGTTTCCCAGTACAGTCGTGTAATTTCGGTCTCTCCATCGAATTCAATATTATCAGCCGGATTAAAAGTTGGGGACC]
[-] EMBL CD189034 [ TGCATTATGGGAGGGCGCACGATTCGAGTCTGTTTTCTGAGGATG TTCGATGAATTAGTTCGGANTATTGTCCATGACTTCTTTATGAATTCAAATGCCTAACGCATAAACCTTTCAGATCAAATATTTTAGGTACAATTTTGTAAATAATTNTACGACTCTAAAACAATGTTTCTCAATTTATGATGCTGTGATCACAAGTGGCTTACCAACCTAACAAATGAGACTAAAAAGCATGTGTGGATACCTCTTTTTGTTACATCTTCATTAAAAACTTAATGAGACCATGATATGCAGAAAATCTCATCCTAAATATCTAAATGGTGATTCGTATGTCAGGTTCTTTACCGAAATGGTGTAGATTATTTTCATTATTTCTCATTTAAAGTATGGTAGATTCGGCTTTAAAGGTAGTTGTTGGTGATGGAGAGTTTGTTCTTGACGAACCAGA ]
consensusID : consensus_10993#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 393 fasta sequence
[AATATTACCTGGTCCCAAACGAACTATATCTGTGGCCGCTATGCTGTATGTAACGTTTGTAGAAGATAAAGATGGGGTATTCGTTGGACTAGGAACATTTGAACATGAAAAGAAAGAACTTGATTGGGAATGAGATGACACAGTATGTTTCACGTTGGTGGGAGACGTACAAGCAGATACCGATTGATAAGGCTTGGTTGAAGGAATACTTTTTTCGACCGGGTTCGAATCCGAGTTTTCTGACACAAGATTTGGTGAACCAGTGGCGAAAACAAGTCCACCAACACGAGTCATTTGAGCAGCAAGGGAAACACGACTACTGTTAAGATGATGCCACGTGAGTAGGTTATCACGAGATGTGGTGCACTGCGATAGACGANNNTGTCTGCCNCT]
[+] EMBL CD164880 [AATATTACCTGGTCCCAAACGAACTATATCTGTGGCCGCTATGCTGTATGTAACGTTTGTAGAAGATAAAGATGGGGTATTCGTTGGACTAGGAACATTTGAACATGAAAAGAAAGAACTTGATTGGGAATGAGATGACACAGTATGTTTCACGTTGGTGGGAGACGTACAAGCAGATACCGATTGATAAGGCTTGGTTGAAGGAATACTTTTTTCGACCGGGTTCGAATCCGAGTTTTCTGACACAAGATTTGGTGAACCAGTGGCGAAAACAAGTCCACCAACACGAGTCATTTGAGCAGCAAGGGAAACACGACTACTGTTAAGATGATGCCACGTGAGTAGGTTATCACGAGATGTGGTGCACTGCGATAGACGANNNTGTCTGCCNCT]
consensusID : consensus_10993#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 361 fasta sequence
[CCTGTCGATAGACGTTACAAGGTCCCCAACTTTTAATCCGGCTGATAATATTGAATTCGATGGAGAGACCGAAATTACACGACTGTACTGGGAAACGACATCTGAAGAAAATAGGATGAAAAGACGCCAAATAAACACGGAATCAAAAATTTTTGTCAAGGCAAGCCGTGAAATTTTGAATACATAAGTTGATGTTAGTAAATAACATTTCACTTGCTATTTCACGAGTCAGAGCTACCCCAAAGAGACATGTAGATATCAAAGCAGCAAACTTATAACCAATGAGCTCATGATAAATGAGGAAAGCACAAAGTTTTAGTACCTTAAAAAACCCCATATTTCATATACCGGTAAAATNTAT]
[+] EMBL CD117876 [CCTGTCGATAGACGTTACAAGGTCCCCAACTTTTAATCCGGCTGATAATATTGAATTCGATGGAGAGACCGAAATTACACGACTGTACTGGGAAACGACATCTGAAGAAAATAGGATGAAAAGACGCCAAATAAACACGGAATCAAAAATTTTTGTCAAGGCAAGCCGTGAAATTTTGAATACATAAGTTGATGTTAGTAAATAACATTTCACTTGCTATTTCACGAGTCAGAGCTACCCCAAAGAGACATGTAGATATCAAAGCAGCAAACTTATAACCAATGAGCTCATGATAAATGAGGAAAGCACAAAGTTTTAGTACCTTAAAAAACCCCATATTTCATATACCGGTAAAATNTAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10993#0 AGGGCCTTCAGAATGGAATGTATTGGGATGATGTCACAGGTGCTGAAGATCGCATAGAAG 60
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 ------------------------------------------------------------
consensus_10993#0 GATTCACATAACTTTTCTTCGTTCCTGGTCGATTTACTATTGATGGAGACATTTTTGTAG 120
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 ------------------------------------------------------------
consensus_10993#0 GACTTGGTGAAGATGTTGAACAAGGAAAGACTGATTCAGGTGTTCTATTTGTCTCCAAAT 180
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 ------------------------------------------------------------
consensus_10993#0 CTGAATATGTAGTTGAAATATTCGGTTCAGAATTGATGGTGGGCTTTGTACACAAACACG 240
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 ------------------------------------------------------------
consensus_10993#0 AGTCATCTCCATCCGATAATACAGGTGAAGGGACGTTTAAATTAGAGATTGTAAGCGTGG 300
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 ------------------------------------------------------------
consensus_10993#0 ACACTACAGGAACATAAGGACTTCCAGTCATCCCCATTCCAACATATGGTTGTGGAGAAC 360
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 ------------------------------------------------------------
consensus_10993#0 AGTGCATTCGAATCAAACTTGAAGGACTGTACACAGTCGAACCAGCTGCAGCTCGAGTAA 420
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 -------------------------------------CTGCATTATGGGAGGGCGCACGA 23
consensus_10993#0 CAATATTACCTGGTCCCAAACGAACTATATCTGTGGC-CGCTATGTTGTATGTAACATTT 479
consensus_10993#2 -AATATTACCTGGTCCCAAACGAACTATATCTGTGGC-CGCTATGCTGTATGTAACGTTT 58
consensus_10993#3 -------------------------CCTGTCGATAGA-CGTTACAAGGTCCCCAACTTTT 34
consensus_10993#1 TTCGAGTCTGTTTTCTGAGGATGTTTCGATGATTAGTTCGGATTATTGTCCATGACTTCT 83
* * * ** ** ** * *
consensus_10993#0 GTAGAAGATAAAGATGGGGTATTCGTTGGACTAGGAACATTTGAACATGAAAAGAAAGAA 539
consensus_10993#2 GTAGAAGATAAAGATGGGGTATTCGTTGGACTAGGAACATTTGAACATGAAAAGAAAGAA 118
consensus_10993#3 AATCCGGCTGATAATATTGAATTCGATGGA------------GAGACCGAAATTACACGA 82
consensus_10993#1 TTATGAATTCA-AATGCCTAACGCA-TAAACCTTTCAGATCAAATATTTTAGGTACA--A 139
* * ** * * * * * * * * *
consensus_10993#0 CTTGATTGGGAATGAGATGACA-CAGTATGTTTCACGTTGGTGGGAGACGTACAAGCAGA 598
consensus_10993#2 CTTGATTGGGAATGAGATGACA-CAGTATGTTTCACGTTGGTGGGAGACGTACAAGCAGA 177
consensus_10993#3 CTGTACTGGGAA----ACGACATCTGAAGAAAATAGGATGA--AAAGACGC-CAAATAAA 135
consensus_10993#1 TTTTGTAAATAATTTTACGACTCTAAAACAATGTTTCTCAATTTATGATGCTGTGATCAC 199
* ** * *** * ** *
consensus_10993#0 TACCGATTGATAAGGCTTGGTTGAAGGAATACTTTTTTCGACCGGGTTCGAATCCGAGTT 658
consensus_10993#2 TACCGATTGATAAGGCTTGGTTGAAGGAATACTTTTTTCGACCGGGTTCGAATCCGAGTT 237
consensus_10993#3 CACGGAATCAAAAATTTTTGTC-AAGGCAAGCCGTGAAATTTTGAATACATAAGTTGATG 194
consensus_10993#1 AAGTGGCTTACCAACCT------AACAAATGAGACTAAAAAGCATGTGTGGATACCTCTT 253
* * * * * * ** * * * *
consensus_10993#0 TTCTGACACAAGATTTGGTGAACCAGTGGCGAAAACAAGTCCAC-CAACACGAGTCATT- 716
consensus_10993#2 TTCTGACACAAGATTTGGTGAACCAGTGGCGAAAACAAGTCCAC-CAACACGAGTCATT- 295
consensus_10993#3 TTAGTAAATAACATTTCACTTGCTATTTCACGAGTCAGAGCTAC-CCCAAAGAGACATG- 252
consensus_10993#1 TTTGT---TACATCTTCATTAAAAACTTAATGAGACCATGATATGCAGAAAATCTCATCC 310
** * ** * * * * * * * ***
consensus_10993#0 TGAGCAGCAAGGGA--AACACGACTACTGTTAAGATGATGCCACGTGAGTAGGTTATCAC 774
consensus_10993#2 TGAGCAGCAAGGGA--AACACGACTACTGTTAAGATGATGCCACGTGAGTAGGTTATCAC 353
consensus_10993#3 TAGATATCAAAGCAGCAAACTTATAACCAATGAGCTCATGATAAATGAGGAAAGCACAA- 311
consensus_10993#1 TAAATATCTAAATGGTGATTCGTATGTCAGGTTCTTTACCGAAATGGTGTAGATTATTTT 370
* * * * * * * * * * * *
consensus_10993#0 GAGATGTGGTGCACTGCGATAGACGAGGATTGCAATGAGCAGTATGGGTAGGAGAAATAG 834
consensus_10993#2 GAGATGTGGTGCACTGCGATAGACGANNNTGTCTGCCNCT-------------------- 393
consensus_10993#3 -AGTTTTAGTACCTTAAAAAACCCCATATTTCATATACCGGTAAAATNTAT--------- 361
consensus_10993#1 CATTATTTCTCATTTAAAGTATGGTAGATTCGGCTTTAAAGGTAGTTGTTGGTGATGGAG 430
* * * * * * *
consensus_10993#0 GAACATGTGATTGGTCATGCGCAGCAGTTGTACCGGGACTTCGAACAAGGTTAACAGATT 894
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 -AGTTTGTTCTTGACGAACCAGATGTCGTTTCCCAGTACAGTCGTGTAATTTCGGTCTCT 489
consensus_10993#0 GGCTAGAACTATAGCATACAGGTCTTCTAGTCCCTCGTGGAGAAACACGACAAACGTGAG 954
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 CCATCGAATTCAATATTATCAGCCGGATTAAAAGTTGGGGACC----------------- 532
consensus_10993#0 GGTAAGGAGAAGTAGGATGAGTGGTTGAAAAGTTCGTATTCCTTGAGTGTGAAAATCTGT 1014
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 ------------------------------------------------------------
consensus_10993#0 AGTTGGGATCTGGTACCAAACGTTTCTGATTACAGCTGGTGGATGATTGATATAAATAGT 1074
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 ------------------------------------------------------------
consensus_10993#0 GCCCAAGTTGATTAGTTTCTGAAGATCCTATTTGAAGCAGTTGATCAGTTGTAAGCCCAC 1134
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 ------------------------------------------------------------
consensus_10993#0 CATCGATAGCTAGTCTTGCAACTGCACCTAATTGAGACTCGCATGAACCAATAACAGGAG 1194
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 ------------------------------------------------------------
consensus_10993#0 AACAGGTAGAAGTGTGCTTTGGTTTGTAATTTATTTGCGGACTAGGTTTTTCGAGGGAGC 1254
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 ------------------------------------------------------------
consensus_10993#0 TGTTCTTTACATTAACATTGCGTTGTGACTTCGCAGTGTCTGGAAATGAGTGATATGCCT 1314
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 ------------------------------------------------------------
consensus_10993#0 GTCTATGTATTATTCGCANATTCTCATGTTCTGATTTGTCTGATGAGAGTTCAGTAACTT 1374
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 ------------------------------------------------------------
consensus_10993#0 TATTTATTGTTTGACAAATTGTTTTGTTACCAACTTCTACTGGGAAGGAACAACATATTT 1434
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 ------------------------------------------------------------
consensus_10993#0 CACCACCATTATCTATCACTTTCAGTTTCAGTTCACCGGAACTGGTAGAGTCATTAATTA 1494
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 ------------------------------------------------------------
consensus_10993#0 AAGACTTCAATTCATCGAGTTTTAGTCCACTAGTAGGGATCCTGTCGATAGACGTTACAA 1554
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 ------------------------------------------------------------
consensus_10993#0 GGTCCCCAACTTTTAATCCGGCTGATAATATTGAATTCGATGGAGAGACCGAAATTACAC 1614
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 ------------------------------------------------------------
consensus_10993#0 GACTGTACTGGGAAACGACATATGACTGATTAATCTCGGGAATATTCTTAGCAAAGGCGT 1674
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 ------------------------------------------------------------
consensus_10993#0 CTTAAATATAACGGACGTTTGCGCTTTTATAAATTAAACGCAGTGTTCTGCGAGACGGGA 1734
consensus_10993#2 ------------------------------------------------------------
consensus_10993#3 ------------------------------------------------------------
consensus_10993#1 ------------------------------------------------------------
consensus_10993#0 TTATTTCAGCCAT 1747
consensus_10993#2 -------------
consensus_10993#3 -------------
consensus_10993#1 -------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||