cluster # 11000

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Schistosoma mansoni
cluster # 11000 cluster # 11000 Sequences # 28 consensus # 7

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11000#0 length = 2040 sequences # 19
consensus_11000#1 length = 500 sequences # 2
consensus_11000#2 length = 431 sequences # 1

consensus_11000#3 length = 319 sequences # 1
consensus_11000#4 length = 310 sequences # 1
consensus_11000#5 length = 244 sequences # 3
consensus_11000#6 length = 108 sequences # 1

consensusID : consensus_11000#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 19
consensus length = 2040
fasta sequence

                              [ACAGGAGGACCAGTCAAATACATGAGCAAATTAAAAACTACAACCTAGTGGTGCTCGGAAAAGTGGAACCCATTGAGCGCAAGCTTGACAGAAAGATCAGCTTCAGAGTAGGTGCTGTTGTGTTCTGATCATGAAGTAGAAAATGCTTCACACACACGAGGAGTTGCATTGCTGCTCTTCAAAGAAGTGCACAAAGCACTTATGGGATGGCAATTTCATGGATCTAAGATCATCGAATCAATCTTCAAAACAAAGAAGTAGGGGGTCACAATGAACGGTATCCAATGTTGTGCACACACTAATGTTAGTAGCGCAGGTGTTGGAGATCGGCTTTGTGAGGCTGAATTCCATCGTAGAAAACTGTCGAGGAAGGGAACTGAACATCTTGATAGGAAATCAGAACACTAAGCCTGATATGTTTAACGCCCAGTATAAAGGCATCATGGAGTGATATTGTTGTGAACAGAACACTGGTTGGGGACAATCGAATGTATTTAAGCAAAGATTACAGACTATCTCAATAAATTCTGATTACCAAACAATGAACAGTCAATTTGCAAATTAACAACCAATTGTTTCAATCTTCACTGTTTCTTCTCTTATTCCATTGCTCATGCATTTTCCAGACGTTTGCGTTTCATTTCAGTTCTTTCCTCATCGGTCTTCTGCCAAAATACA-TTCTATGTCTGACCCACACCATATACTACTTATATGGATATAAGTAGACCACACCACACTCGTCCCCCCTTTAAAGCATTCGTTCAT-GCGGTGGTTCTGCTCGCCATGCCACTATCTTCTTTCACTGCAGTCTGTGCCAAACTCTCCGTCAGAATGTCGAGTCTGCGGCGCGCTGACCTCCATAGCTCCGTCGACCTGCCGGGGCACCAACATCCGCATCCACCCGGCACCTGGGACGTTCAACACCCGTACTCCACCGGCCTGCTGAGCCATCTACATCCGATGTCCGCCCAGCAGCCGCAC-GTCCCACTGCTCCTCTCCGTCGACAGCACCCGCTACAGCCAACGCCGCCCCGCCAGAACAAGTAGTCGAGTAGTTCGCGGCATATTAAGAATCAAGGCTCTAGATATTACAGGATTCTATATGAAGTGTATCAGTTCCTTTAGGATTACAGATAAACTCTAAGTTCTCAAGTCACAAATATCACCAAATCTATGTGCTAAGATTTCTGGCGACTCAATTCTAGTTTTTTATACCAAAAATCTAGTTAGATAATTTTTATAGAAATTTTTACGGCGGCCGAACTATATACGTATTTATAGAACTCTCCCATANATCACAACACAGTACATTTCATAAGATAATAAAACTTGTTAATTAGCTGAATACAGTGTGATGAAACAAATTTAAAGTGGAAAGTCGAATCAGGAAAAAATGGTTAGACGCACAGCTACTGTAGTGTGTGCTACTGATGTCGATAGATATAAGTAGTATGTATCATCAACCGAAAGTAAAATGACTGGNCGTTAGAAGGTTAAGAANAACAGAA-AGNAGGANAAAGAAAAAGGAGAATGATTGGTCTGGAAACGAGGGAACAATCAAGTGTGAGACAATTGATTGACATTTTGCAAATGAAGTGTTTACTGTATGGTTCTCAGATTTGACTAAGATATTCTGTAATTTTTTTGTCCGAATGCATTTGGTTGTTCCCACTGCGTCCTCGCTAACTACCATACTATTAACATTGGTAATACCTAAAATAAATTGAATTTCTTTGTAACACAATTTGATATTTCTAATAAGCTTGATTAACAGAGAATATGTGGCTAGTAAACTCGGTCACCATTTGAAATCAAACGGTCATAGGATATCTCAGAAGAGATTCCCACCACACGAAATACTTATGGTCCTTGAGAAACATTATGAGTCAAAATGTTTGAAGTATTCTTCATTATACTTCGAAAACCATTCAGTTTAATGAGTTTTTGTTTACATGCGGACATTGAAGATCATAATGTTGCATGATTCTACTTTCACTCCAAGCATTGTGTGTATCTTTTGTAACTGAGTTGTCTTTAATAA]

[+] EMBL CD086248             [ACAGGAGGACCAGTCAAATACATGAGCAAATTAAAAACTACAACCTAGTGGTGCTCGGAAAAGTGGAACCCATTGAGCGCAAGCTTGACAGAAAGATCAGCTTCAGAGTAGGTGCTGTTGTGTTCTGATCATGAAGTAGAAAATGCTTCACACACACGAGGAGTTGCATTGCTGCTCTTCAAAGAAGTGCACAAAGCACTTATGGGATGGCAATTTCATGGATCTAAGATCATCGAATCAATCTTCAAAACAAAGAAGTAGGGGGTCACAATGAACGGTATCCAATGTTGTGCACACACTAATGTTAGTAGCGCAGGTGTTGGAGATCGGCTTTGTGAGGCTGAATTCCATCGTAGAAAACTGTCGAGGAAGGGAACTGAACATCTTGATAGGAAATCAGAACACTAAGCCTGATATGTTTAACGCCCAGTATAAAGGCATCATGGAGTGATATTGTTGTGAACAGAACACTGGTTGGGGACAATCGAATGTATTTAAGCAAAAATTACAGACTATCTCAGTAAACTCTGATAACCAAACAATGAACAGTCAATTTGCAAATTAACAACCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BG931415             [                                                                                                                                                                                                                                                                                                                                                                     AATCTGTCTAGGAAGGAAACTGAACATCTTGATAGGAAATCAGAACACTAAGCCTGATATGTTTAACGCCCAGTATAAAGGCATCATGGAGTGATATTGTTGTGAACAGAACACTGGTTGGGGACAATCGAATGTATTTAAGCAAAAATTACAGACTATCTCAGTAAATTCTGATAACCAAACAATGAACAGTCAATTTGCAAATTAACAACCAATTGTTTCAATCTTCTCTGTTTCTTCTATAATTTCATTGCTCATGCATTTTCCAAACGATTGCGCTTCATTTCAGTTCTTTGCACATCGGTCTTCTGGCAAAATACA TTCTATGTCTGACCAACACCATATACTACTTATATAGATATAAGTAGACCACACCACACTCATCCCCCCTTTAAAGCATTCGACCAT GCGGTGGTTCTGCTCGCCACGCCACTATCTTCTTTCACTGCAGTCTGTGCCAAACTCTCCGTCAGAATGTCGAGTCTGCGGCGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AI068139             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGAATGTATTTAAGCAAAGATTACAGACTATCTCAATAAATTCTGATTACCAAACAATGAACAGTCAATTTGCAAATTAACAACCAATTGTTTCAATCTTCACTGTTTCTTCTCTTATTCCATTGCTCATGCATTTTCCAGACGTTTGCGTTTCATTTCAGTTCTTTCCTCATCGGTCTTCTGCCAAAATACA TTCTATGTCTGACCCACACCATATACTACTTATATGGATATAAGTAGACCACACCACACTCGTCCCCCCTTTAAAGCATTCGTTCAT GCGGTGGTTCTGCTCGCCATGCCACTATCTTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AI068160             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGAATGTATTTAAGCAAAGATTACAGACTATCTCAATAAATTCTGATTACCAAACAATGAACAGTCAATTTGCAAATTAACAACCAATTGTTTCAATCTTCACTGTTTCTTCTCTTATTCCATTGCTCATGCATTTTCCAGACGTTTGCGTTTCATTTCAGTTCTTTCCTCATCGGTCTTCTGCCAAAATACA TTCTATGTCTGACCCACACCATATACTACTTATATGGATATAAGTAGACCACACCACACTCGTCCCCCCTTTAAAGCATTCGTTCAT GCGGTGGTTCTGCTCGCCATGCCACTATCTTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AI067904             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGAATGTATTTAAGCAAAGATTACAGACTATCTCAATAAATTCTGATTACCAAACAATGAACAGTCAATTTGCAAATTAACAACCAATTGTTTCAATCTTCACTGTTTCTTCTCTTATTCCATTGCTCATGCATTTTCCAGACGTTTGCGTTTCATTTCAGTTCTTTCCTCATCGGTCTTCTGCCAAAATACA TTCTATGTCTGACCCACACCATATACTACTTATATGGATATAAGTAGACCACACCACACTCGTCCCCCCTTTAAAGCATTCGTTCAT GCGGTGGTTCTGCTCGCCATGCCACTATCTTCTTTCACTGCAGTCTGTGCCAAACTCTCCGTCAGAATGTCGAGTCTGCGGCGCGCTGACCTCCATAGCTCCGTCGACCTGCCGGGGCACCAACATCCGCATCCACCCGGCACCTGNGACGTTCAACAACCGTACTCCACCGGCCTGCTGAGCCATCTACATCCGATGTCCGCCCAGCAGCCGCAC GTCCCACTGCTCCTCTCCGTCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AI976122             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGAATGTATTTAAACAAAGATTACAGACTATCTCAGTAAATTCTGATAACCAAACAATGAACAGTCAATTTGCAAATTAACAACCAATTGTTTCAATCTTCACTGTTTCTTCTCTAATTCCATTGCTCATACATTTTCCAAACGATTGCGCTTCATTTCAGTTCTTTCTTCATCGGTCTTCTGCGAAAATACA TTCCATGTCTGACCAACACCATATACTACTTATATAGATATAAGTAGACCACACCACACTCGTCCCCCCTTTAAAGCATTCGACCAT GCGGTGGTTCTGCTCGCCGAGCCGCAATCTTCTTCCACTGCAGTCTGTGCCAAACTCTCCGTCAGAATGTCGAGTTTGCGGCGCGCTGACCTCCATAGCTCCGTCGACCTGCCGGGGCACCAACATCCGCATCCACCCGGCACCTGGGACGTTGAACACCCGTACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AI067483             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGAATGTATTTAAGCAAAGATTACAGACTATCTCAATAAATTCTGATTACCAAACAATGAACAGTCAATTTGCAAATTAACAACCAATTGTTTCAATCTTCACTGTTTCTTCTCTTATTCCATTGCTCATGCATTTTCCAGACGTTTGCGTTTCATTTCAGTTCTTTCCTCATCGGTCTTCTGCCAAAATACA TTCTATGTCTGACCCACACCATATACTACTTATATGGATATAAGTAGACCACACCACACTCGTCGCCCCTTTAGAGCATTCGTTCAT GCGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AI067442             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGAATGTATTTAAGCAAAGATTACAGACTATCTCAATAAATTCTGATTACCAAACAATGAACAGTCAATTTGCAAATTAACAACCAATTGTTTCAATCTTCACTGTTTCTTCTCTTATTCCATTGCTCATGCATTTTCCAGACGTTTGCGTTTCATTTCAGTTCTTTCCTCATCGGTCTTCTGCCAAAATACA TTCTATGTCTGACCCACACCATATACTACTTATATGGATATAAGTAGACCAGACGAGACTCGTCCCCCCTTTAAAGCATTCGTTCAT GCGGTGGTTCTGCTCGCCATGCCACTATCTTCTTTCACTGCAGTCTGTGCCAAACTCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL SMT14602             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGAATGTNTTTAAGCAAAGATTACAGACTATCTCAATAAATTCTGATTACCAAACAATGAACAGTCAATTTGCAAATNAACAACCAATTGTTTCAATCTTCACTGTTTCTNCTCTTATTCCATTGCTCATGCATTTNCCAGACGTTTGCGTTTCATTTCAGTNCTTTCCTCATCGGTCTTCTGCCAAAATACA TTCTATGTCTGACCCACACCATATACTACTTATATGGNTATAAGTAGACCACACCACACTCGTCCCCCCTTTAAAGCATTCGTTCAT GCGGTGGTTCTGCTCGCCATGCCACTATCTTCTTTCACTGCAGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AI018927             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAGATTACAGACTATCTCAATAAATTCTGATTACCAAACAATGAAC GT  A   NC AATTAACAACCAATTGTTTCAATCTTCACTGTTTCTTCTCTTATTCCATTGCTCATGCATTTTCCAGACGTTTGCGTTTCATTTCAGTTCTTTCCTCATCGGTCTTCTGCCAAAATACATTTCTATGTCTGACCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BG931782             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTCTTCTCTTATTCCATTGCTCATGCATTTTCCAGACGTTTGCGTTTCATTTCAGTTCTTTCCTCATCGGTCTTCTGCCAAAATACA TTCTATGTCTGACCCACACCATATACTACTTATATGGATATAAGTAGACCACACCACACTCGTCCCCCCTTTAAAGCATTCGTTCAT GCGGTGGTTCTGCTCGCCATGCCACTATCTTCTTTCACCGCAGTCTGTGCCAAACTCTCCGTCAGAATGTCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BG931668             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCCAGACGTTTGCGTTTCATTTCAGTTCTTTCCTCATCGGTCTTCTGCCAAAATACA TTCTATGTCTGACCCACACCATATACTACTTATATGGATATAAGTAGACCACACCACACTCGTCCCCCCTTTAAAGCATTCGTTCAT GCGGTGGTTCTGCTCGCCATGCCACTATCTTCTTTCACTGCAGTCTGTGCCAAACTCTCCGTCAGAATGTCGAGTCTGCGGCGCGCTGACCTTCATAGCTCCGTCGACCTGCCGGGGCACCAACATCCGCATCCACCCGGCACCTGGGACGTTCAACACCCGTACTCCACCGGCCTGCTGAGCCATCTACATCCGATGTCCGCCCAGCAGCCGCAC GTCCCACTGCTCCTCTCCGTCGACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BG931207             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            cTCATTTCAGTTCTTTCCTCATCGGTCTTCTGCCAAAATACA TTCTATGTCTGACCCACACCATATACTACTTATATAGATATAAGTAGACCACACCACACTCGTCCCCCCTTTAAAGCATTCGACCATAGCAGTGGTTCTGCTCGCCACTCCACTATCTGCTGTGACTGCAGTCTGTGCCAGACTCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BG932352             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           tagGCCATGCCACTTTCTTGTTTCACTGCAGTCTGTGCCAAAGTGTTCGTGAGAATGTCGAGTGTGTGGCGCGCTGACCTCCATAGCTCAGTCGACCTGCCGTGGCACCAACATCCGCATGCACCCGACACCTGGGACGTTCAACATCCATACTCCACCGGCCTGCTGAGCCATCTACATCCGATGTCCGCCCAGCAGCCGCAC GTCCCACTGCTCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BG931541             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   gtCACTATCTTCTTTCACTGCAGTCTGTGCCAAACTCTCCGTCAGAATGTCGAGTCTGCGGCGCGCTGACCTTCATAGCTCCGTCGACCTGCCGGGGCACCAACATCCGCATCCACCCGGCACCTGGGACGTTCAACACCCGTACTCCACCGGCCTGCTGAGCCATCTACATCCGATGTCCGCCCAGCAGCCGCAC GTCCCACTGCTCCTCTCCGTCGACAGCACCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BG932844             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ACTATCTTCTTTCACTGCAGTCTGTGCCAAACTCTCCGTCAGAATGTCGAGTCTGCGGCGCGCTGACCTTCATAGCTCCGTCGACCTGACGGGGCACCAACATCCGCATCCACCCGGGACCTGTGACGTTCAACACCCGTACTCCACCGGCCTGCTGAGCCATCTACATCCGATGTCCGCCCATCAGCCGCACGGTCCCACTGCTCCTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD150464             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCACTGCAGTCTGTGCCAAACTCTCCGTCAGAATGTCGAGTCTGCGGCGCGCTGACCTCCATAGCTCCGTCGACCTGCCGGGGCACCAACATCCGCATCCACCCGGCACCTGGGACGTTCAACACCCGTACTCCACCGGCCTGCTGAGCCATCTACATCCGATGTCCGCCCAGCAGCCGCAC GTCCCACTGCTCCTCTCCGTCGACAGCACCCGCTACAGCCAACGCCGCCCCGCCAGAACAAGTAGTCGAGTAGTTCGCGGCATATTAAGAATCAAGGCTCTAGATATTACAGGATTCTATATGAAGTGTATCAGTTCCTTTAGGATTACAGATAAACTCTAAGTTCTCAAGTCACAAATATCACCAAATCTATGTGCTAAGATTTCTGGCGACTCAATTCTAGTTTTTTATACCAAAAATCTAGTTAGATAATTTTTATAGAAATTTTTACGGCGGCCGAACTATATACGTATTTATAGAACTCTCCCATANATCACAACACAGTACATTTCATAAGATAATAAAACTTGTTAATTAGCTGAATACAGTGTGATGAAACAAATTTAAAGTGGAAAGTCGAATCAGGAAAAAATGGTTAGACGCACAGCTACTGTAGTGTGTGCTACTGATGTCGATAGATATAAGTAGTATGTATCATCAACCGAAAGTAAAATGACTGGNCGTTAGAAGGTTAAGAANAACAGAA AGNAGGAN                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD074876             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATAAAACTTGTTAATTAGCTGAATACAGTGTGATGAAACAAATTTAAAGTGGAAAGTCGAATCAGGAAAAAATGGTTAGACGCACAGCTACTGTAGTGTGTGCTACTGATGTCGATAGATATAAGTAGTATGTATCATCAATCGAAAGTAAAATGACTGG CGGTAGAAGGTTAAGAA AACAGAAGAG AGGAGAAAGAAAAAGGAGAATGATTGGTCTGGAAACGAGGGAACAATCAAGTGTGAGACAATTGATTGACATTTTGCAAATGAAGTGTTTACTGTATGGTTCTCAGATTTGACTAAGATATTCTGTAATTTTTTTGTCCGAATGCATTTGGTTGTTCCCACTGCGTCCTCGCTAACTACCATACTATTAACATTGGTAATACCTAAAATAAATTGAATTTCTTTGTAACACAATTTGATATTTCTAATAAGCTTGATTAACAGAGAATATGTGGCTAGTAAACTCGGTCACCATTTGAAATCAAACGGTCATAGGATATCTCAGAAGAGATTCCCACCACACGAAATACTTATGGTCCTTGAGAAACATTATGAGTCAAAATGTTTGAAGTATTCTTCATTATACTTCGAAAACCATTCAGTTTAATGAGTTTTTGTTTACATGCGGACATTGAAGATCATAATGTTGCATGA                                                         ]
[+] EMBL CD152702             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTAGTAAACTCGGTCACCATTTGAAATCAAACGGTCATAGGATATCTCAGAAGAGATTCCCACCACACGAAATACTTATGGTCCTTGAGAAACATTATGAGTCAAAATGTTTGAAGTATTCTTCATTATACTTCGAAAACCATTCAGTTTAATGAGTTTTTGTTTACATGCGGACATTGAAGATCATAATGTTGCATGATTCTACTTTCACTCCAAGCATTGTGTGTATCTTTTGTAACTGAGTTGTCTTTAATAA]




>consensus_11000#0
ACAGGAGGACCAGTCAAATACATGAGCAAATTAAAAACTACAACCTAGTGGTGCTCGGAA
AAGTGGAACCCATTGAGCGCAAGCTTGACAGAAAGATCAGCTTCAGAGTAGGTGCTGTTG
TGTTCTGATCATGAAGTAGAAAATGCTTCACACACACGAGGAGTTGCATTGCTGCTCTTC
AAAGAAGTGCACAAAGCACTTATGGGATGGCAATTTCATGGATCTAAGATCATCGAATCA
ATCTTCAAAACAAAGAAGTAGGGGGTCACAATGAACGGTATCCAATGTTGTGCACACACT
AATGTTAGTAGCGCAGGTGTTGGAGATCGGCTTTGTGAGGCTGAATTCCATCGTAGAAAA
CTGTCGAGGAAGGGAACTGAACATCTTGATAGGAAATCAGAACACTAAGCCTGATATGTT
TAACGCCCAGTATAAAGGCATCATGGAGTGATATTGTTGTGAACAGAACACTGGTTGGGG
ACAATCGAATGTATTTAAGCAAAGATTACAGACTATCTCAATAAATTCTGATTACCAAAC
AATGAACAGTCAATTTGCAAATTAACAACCAATTGTTTCAATCTTCACTGTTTCTTCTCT
TATTCCATTGCTCATGCATTTTCCAGACGTTTGCGTTTCATTTCAGTTCTTTCCTCATCG
GTCTTCTGCCAAAATACATTCTATGTCTGACCCACACCATATACTACTTATATGGATATA
AGTAGACCACACCACACTCGTCCCCCCTTTAAAGCATTCGTTCATGCGGTGGTTCTGCTC
GCCATGCCACTATCTTCTTTCACTGCAGTCTGTGCCAAACTCTCCGTCAGAATGTCGAGT
CTGCGGCGCGCTGACCTCCATAGCTCCGTCGACCTGCCGGGGCACCAACATCCGCATCCA
CCCGGCACCTGGGACGTTCAACACCCGTACTCCACCGGCCTGCTGAGCCATCTACATCCG
ATGTCCGCCCAGCAGCCGCACGTCCCACTGCTCCTCTCCGTCGACAGCACCCGCTACAGC
CAACGCCGCCCCGCCAGAACAAGTAGTCGAGTAGTTCGCGGCATATTAAGAATCAAGGCT
CTAGATATTACAGGATTCTATATGAAGTGTATCAGTTCCTTTAGGATTACAGATAAACTC
TAAGTTCTCAAGTCACAAATATCACCAAATCTATGTGCTAAGATTTCTGGCGACTCAATT
CTAGTTTTTTATACCAAAAATCTAGTTAGATAATTTTTATAGAAATTTTTACGGCGGCCG
AACTATATACGTATTTATAGAACTCTCCCATANATCACAACACAGTACATTTCATAAGAT
AATAAAACTTGTTAATTAGCTGAATACAGTGTGATGAAACAAATTTAAAGTGGAAAGTCG
AATCAGGAAAAAATGGTTAGACGCACAGCTACTGTAGTGTGTGCTACTGATGTCGATAGA
TATAAGTAGTATGTATCATCAACCGAAAGTAAAATGACTGGNCGTTAGAAGGTTAAGAAN
AACAGAAAGNAGGANAAAGAAAAAGGAGAATGATTGGTCTGGAAACGAGGGAACAATCAA
GTGTGAGACAATTGATTGACATTTTGCAAATGAAGTGTTTACTGTATGGTTCTCAGATTT
GACTAAGATATTCTGTAATTTTTTTGTCCGAATGCATTTGGTTGTTCCCACTGCGTCCTC
GCTAACTACCATACTATTAACATTGGTAATACCTAAAATAAATTGAATTTCTTTGTAACA
CAATTTGATATTTCTAATAAGCTTGATTAACAGAGAATATGTGGCTAGTAAACTCGGTCA
CCATTTGAAATCAAACGGTCATAGGATATCTCAGAAGAGATTCCCACCACACGAAATACT
TATGGTCCTTGAGAAACATTATGAGTCAAAATGTTTGAAGTATTCTTCATTATACTTCGA
AAACCATTCAGTTTAATGAGTTTTTGTTTACATGCGGACATTGAAGATCATAATGTTGCA
TGATTCTACTTTCACTCCAAGCATTGTGTGTATCTTTTGTAACTGAGTTGTCTTTAATAA

consensusID : consensus_11000#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 500
fasta sequence

                              [ATACGTTATAACAACTGGCGACGGGGTAAAAAAAATTGGCTTTAACTTCCGATCAATTTCAGTTGCTAATCCAGAGACAAGAGCAGCGTTTTAAAAAGAGTCAGTTGGATTTCATTGACAAGTTACACGCGAAGCTGCTGAATCACCTATGCTTTGGGGGTGCAACGGAAGTTGACTCATTGATTTCTAAATTGCGTACAGAGCTGGAAATCGATTGCAGAATGAATGAATATACCAGTGAAAGCCTCAATGAATCCATGACAAACAGTAAATTAAACGAAGCAATAGCAGTCATACATGATCAGCCCAGTAGTCCAGTACTGTCTGTTTCAAAGACATGCCCTATAAACGGTCCAAATCATGTTATCCCCCANAAAGGACGTGCAAACAGTGAATTATCCTGTTCACAGAAAGAATATGTCTTGCTAAATGCTTATAAAATTGCTGCAGTACCCGCCCACGAAGAAACGGGGAACAAATTGAGCAGTATTGTTAATACA]

[+] EMBL CD089609             [ATACGTTATAACAACTGGCGACGGGGTAAAAAAAATTGGCTTTAACTTCCGATCAATTTCAGTTGCTAATCCAGAGACAAGAGCAGCGTTTTAAAAAGAGTCAGTTGGATTTCATTGACAAGTTACACGCGAAGCTGCTGAATCACCTATGCTTTGGGGGTGCAACGGAAGTTGACTCATTGATTTCTAAATTGCGTACAGAGCTGGAAATCGATTGCAGAATGAATGAATATACCAGTGAAAGCCTCAATGAATCCATGACAAACAGTAAATTAAACGAAGCAATAGCAGTCATACATGATCAGCCCAGTAGTCCAGTACTGTCTGTTTCAAAGACATGCCCTATAAACGGTCCAAATCATGTTATCCCCCANAAAGGACGT                                                                                                                     ]
[+] EMBL CD090848             [                                                                                                   cgCANTTGGTTTTTATTGACAAGTTACACGCGAAGCTGCTGAATCACCTATGCTTTGGGGGTGCAACGGAAGTTGACTCATTGATTTCTAAATTGCGTACAGAGCTGGAAATCGATTGCAGAATGAATGAATATACCAGTGAAAGCCTCAATGAATCCATGACAAACAGTAAATTAAACGAAGCAATAGCAGTCATACATGATCAGCCCAGTAGTCCAGTACTGTCTGTTTCAAAGACATGCCCTATAAACGGTCCAAATCATGTTATCCCCCAAAAAGGACGTGCAAACAGTGAATTATCCTGTTCACAGAAAGAATATGTCTTGCTAAATGCTTATAAAATTGCTGCAGTACCCGCCCACGAAGAAACGGGGAACAAATTGAGCAGTATTGTTAATACA]




>consensus_11000#1
ATACGTTATAACAACTGGCGACGGGGTAAAAAAAATTGGCTTTAACTTCCGATCAATTTC
AGTTGCTAATCCAGAGACAAGAGCAGCGTTTTAAAAAGAGTCAGTTGGATTTCATTGACA
AGTTACACGCGAAGCTGCTGAATCACCTATGCTTTGGGGGTGCAACGGAAGTTGACTCAT
TGATTTCTAAATTGCGTACAGAGCTGGAAATCGATTGCAGAATGAATGAATATACCAGTG
AAAGCCTCAATGAATCCATGACAAACAGTAAATTAAACGAAGCAATAGCAGTCATACATG
ATCAGCCCAGTAGTCCAGTACTGTCTGTTTCAAAGACATGCCCTATAAACGGTCCAAATC
ATGTTATCCCCCANAAAGGACGTGCAAACAGTGAATTATCCTGTTCACAGAAAGAATATG
TCTTGCTAAATGCTTATAAAATTGCTGCAGTACCCGCCCACGAAGAAACGGGGAACAAAT
TGAGCAGTATTGTTAATACA

consensusID : consensus_11000#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 431
fasta sequence

                              [CTGGCTGGGCTAGGCAGATAGCAGGGCCGATACTCACTCAAGACTGCTCGTACGATTTTATGCATCATCGTTGCGCCGATCAATAAATTCGCTTCTCTCTAATTGCACATTCATATATATTACGAGCGCACACGATATAACAACTGGCAACGGGGTAAAAAAATGGCTTTAACTTCCGATCAATTTCAGTTGCTAATCCAGAGACAAGAGCAGCGTTTAAAAAAGAGTCACTTGGATTTCATTGACAAGTTACACGCGAAGCTGCTGAATCACCCATGCTTTGGGGGTGCAACGGAAGTTGACGCATTGATTTCTAAATTGCGTACAGAACTGGAAGTCGATTGCAGAACAAATGAATATGCAGAGGAAAGCCTCAATGAATCCGCGAAAAACAGTAATTTAAATGCAGCAGTAGCAGTCCTACATGATCA]

[+] EMBL AI976621             [CTGGCTGGGCTAGGCAGATAGCAGGGCCGATACTCACTCAAGACTGCTCGTACGATTTTATGCATCATCGTTGCGCCGATCAATAAATTCGCTTCTCTCTAATTGCACATTCATATATATTACGAGCGCACACGATATAACAACTGGCAACGGGGTAAAAAAATGGCTTTAACTTCCGATCAATTTCAGTTGCTAATCCAGAGACAAGAGCAGCGTTTAAAAAAGAGTCACTTGGATTTCATTGACAAGTTACACGCGAAGCTGCTGAATCACCCATGCTTTGGGGGTGCAACGGAAGTTGACGCATTGATTTCTAAATTGCGTACAGAACTGGAAGTCGATTGCAGAACAAATGAATATGCAGAGGAAAGCCTCAATGAATCCGCGAAAAACAGTAATTTAAATGCAGCAGTAGCAGTCCTACATGATCA]




>consensus_11000#2
CTGGCTGGGCTAGGCAGATAGCAGGGCCGATACTCACTCAAGACTGCTCGTACGATTTTA
TGCATCATCGTTGCGCCGATCAATAAATTCGCTTCTCTCTAATTGCACATTCATATATAT
TACGAGCGCACACGATATAACAACTGGCAACGGGGTAAAAAAATGGCTTTAACTTCCGAT
CAATTTCAGTTGCTAATCCAGAGACAAGAGCAGCGTTTAAAAAAGAGTCACTTGGATTTC
ATTGACAAGTTACACGCGAAGCTGCTGAATCACCCATGCTTTGGGGGTGCAACGGAAGTT
GACGCATTGATTTCTAAATTGCGTACAGAACTGGAAGTCGATTGCAGAACAAATGAATAT
GCAGAGGAAAGCCTCAATGAATCCGCGAAAAACAGTAATTTAAATGCAGCAGTAGCAGTC
CTACATGATCA

consensusID : consensus_11000#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 319
fasta sequence

                              [TTTCATTTGTATACTGTAGTGAGCAAAACACTGGTTGGGGACAATCGAATGTATGTAAGCAAAAATTACAGACTATCTCAGTAAATTCTGATAACCAAACAATGAACAGTCAATTTGCAAATTAACAACCAATTGTTTCAATCTTCTCTGTTTCTTCTCTAATTTCATTGCTCATGCATTTTCCAAACGATTGCGCTTCATTTCAGTTCTTTGCACATCGGTCTTCTGGCAAAATACATTCTATGTCTGACCAACACCATATACTACTTATATAGATATAAGTAGACCACACCACACTCGTCCCCCCTTTAAAGCATTC]

[-] EMBL BG932888             [TTTCATTTGTATACTGTAGTGAGCAAAACACTGGTTGGGGACAATCGAATGTATGTAAGCAAAAATTACAGACTATCTCAGTAAATTCTGATAACCAAACAATGAACAGTCAATTTGCAAATTAACAACCAATTGTTTCAATCTTCTCTGTTTCTTCTCTAATTTCATTGCTCATGCATTTTCCAAACGATTGCGCTTCATTTCAGTTCTTTGCACATCGGTCTTCTGGCAAAATACATTCTATGTCTGACCAACACCATATACTACTTATATAGATATAAGTAGACCACACCACACTCGTCCCCCCTTTAAAGCATTC]




>consensus_11000#3
TTTCATTTGTATACTGTAGTGAGCAAAACACTGGTTGGGGACAATCGAATGTATGTAAGC
AAAAATTACAGACTATCTCAGTAAATTCTGATAACCAAACAATGAACAGTCAATTTGCAA
ATTAACAACCAATTGTTTCAATCTTCTCTGTTTCTTCTCTAATTTCATTGCTCATGCATT
TTCCAAACGATTGCGCTTCATTTCAGTTCTTTGCACATCGGTCTTCTGGCAAAATACATT
CTATGTCTGACCAACACCATATACTACTTATATAGATATAAGTAGACCACACCACACTCG
TCCCCCCTTTAAAGCATTC

consensusID : consensus_11000#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 310
fasta sequence

                              [ACGATTGCGCTTGATTTCAGTTCTTTTTCTCATCGGTNTTCTGCCAAAATACATTCCTATGCCTGACTCACACCATATACTACTTATATGGATATAAGTAGACCGAACCACACTCGTCCCTCCTTTAAAGCATTCGTTCATGCGGTGGTTCTGCTCGCCATGCCACTTTCTTGTTTCACTGCAGTCTGTGCCGAAGTCTTCGTGAGAATGTCGAGTCCTGCGGCGCGCTGACCTCCATAGCTGCGTCGACCTGCCGTGGCACCAACATCCGCATGCACCCGGCACCTGGGACGTTGAACATCCGTACTCC]

[-] EMBL SM579                [ACGATTGCGCTTGATTTCAGTTCTTTTTCTCATCGGTNTTCTGCCAAAATACATTCCTATGCCTGACTCACACCATATACTACTTATATGGATATAAGTAGACCGAACCACACTCGTCCCTCCTTTAAAGCATTCGTTCATGCGGTGGTTCTGCTCGCCATGCCACTTTCTTGTTTCACTGCAGTCTGTGCCGAAGTCTTCGTGAGAATGTCGAGTCCTGCGGCGCGCTGACCTCCATAGCTGCGTCGACCTGCCGTGGCACCAACATCCGCATGCACCCGGCACCTGGGACGTTGAACATCCGTACTCC]




>consensus_11000#4
ACGATTGCGCTTGATTTCAGTTCTTTTTCTCATCGGTNTTCTGCCAAAATACATTCCTAT
GCCTGACTCACACCATATACTACTTATATGGATATAAGTAGACCGAACCACACTCGTCCC
TCCTTTAAAGCATTCGTTCATGCGGTGGTTCTGCTCGCCATGCCACTTTCTTGTTTCACT
GCAGTCTGTGCCGAAGTCTTCGTGAGAATGTCGAGTCCTGCGGCGCGCTGACCTCCATAG
CTGCGTCGACCTGCCGTGGCACCAACATCCGCATGCACCCGGCACCTGGGACGTTGAACA
TCCGTACTCC

consensusID : consensus_11000#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 244
fasta sequence

                              [GTCTGTGTCAAACTCTTCGTCAGAATGTCGAGTCTGCGGCGCGCTGACCTCCATAGCTCCGTCGACCTGCCGGGGCACCAACATCCGCATCCACCCGGCACCTGGGACGTTCAACACCCGTACTCCACCGGCCTGCTGAGCCATCTACATCCGATGTCCGCCCAGCAGCCGCACGTCCCACTGCTCCTCTCCGTCGACAGCACCCGCTACAGTCAACGCCGCCCCGCCAGAACACTCCACTCGA]

[+] EMBL BG931716             [GTCTGTGTCAAACTCTTCGTCAGAATGTCGAGTCTGCGGCGCGCTGACCTCCATAGCTCCGTCGACCTGCCGGGGCACCAACATCCGCATCCACCCGGCACCTGGGACGTTCAACACCCGTACTCCACCGGCCTGCTGAGCCATCTACATCCGATGTCCGCCCAGCAGCCGCACGTCCCACTGCTCCTCTCCGTCGACAGCACCCGCTACAGTCAACGCCGCCCCGCCAGAACACTCCACTCGA]
[-] EMBL BF936579             [                                                                                                      TGGGACGTTCAACACCCGTACTCCACCGGCCTGCTGAGCCATCTACATCCGATGTCCGCCCAGCAGCCGCACGTCCCACTGCTCCTCTCCGTCGACAGCACCCGCTACA                                 ]
[-] EMBL AI976261             [                                                                                                      TGGGACGTTCAACACCCGTACTCCACCGGCCTGCTGAGCCATCTACATCCGATGTCCGCCCAGCAGCCGCACGTCCCACTGCTCCTCTCCGTCGACAGCACCCGCTACA                                 ]




>consensus_11000#5
GTCTGTGTCAAACTCTTCGTCAGAATGTCGAGTCTGCGGCGCGCTGACCTCCATAGCTCC
GTCGACCTGCCGGGGCACCAACATCCGCATCCACCCGGCACCTGGGACGTTCAACACCCG
TACTCCACCGGCCTGCTGAGCCATCTACATCCGATGTCCGCCCAGCAGCCGCACGTCCCA
CTGCTCCTCTCCGTCGACAGCACCCGCTACAGTCAACGCCGCCCCGCCAGAACACTCCAC
TCGA

consensusID : consensus_11000#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 108
fasta sequence

                              [TGTGGTCTACTTATATCCATATAAGTAGTATATGGTGTTGGTCAGTACATAGCAATGTATTTTGGGCAGAAGACCGAGCGAGGAAACCAACTGAATCGTAAGCAGCAA]

[+] EMBL AA938787             [TGTGGTCTACTTATATCCATATAAGTAGTATATGGTGTTGGTCAGTACATAGCAATGTATTTTGGGCAGAAGACCGAGCGAGGAAACCAACTGAATCGTAAGCAGCAA]




>consensus_11000#6
TGTGGTCTACTTATATCCATATAAGTAGTATATGGTGTTGGTCAGTACATAGCAATGTAT
TTTGGGCAGAAGACCGAGCGAGGAAACCAACTGAATCGTAAGCAGCAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11000#0      ACAGGAGGACCAGTCAAATACATGAGCAAATTAAAAACTACAACCTAGTGGTGCTCGGAA 60
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      AAGTGGAACCCATTGAGCGCAAGCTTGACAGAAAGATCAGCTTCAGAGTAGGTGCTGTTG 120
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      TGTTCTGATCATGAAGTAGAAAATGCTTCACACACACGAGGAGTTGCATTGCTGCTCTTC 180
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      AAAGAAGTGCACAAAGCACTTATGGGATGGCAATTTCATGGATCTAAGATCATCGAATCA 240
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      ATCTTCAAAACAAAGAAGTAGGGGGTCACAATGAACGGTATCCAATGTTGTGCACACACT 300
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      AATGTTAGTAGCGCAGGTGTTGGAGATCGGCTTTGTGAGGCTGAATTCCATCGTAGAAAA 360
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      CTGTCGAGGAAGGGAACTGAACATCTTGATAGGAAATCAGAACACTAAGCCTGATATGTT 420
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      TAACGCCCAGTATAAAGGCATCATGGAGTGATATTGTTGTGAACAGAACACTGGTTGGGG 480
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      ACAATCGAATGTATTTAAGCAAAGATTACAGACTATCTCAATAAATTCTGATTACCAAAC 540
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      AATGAACAGTCAATTTGCAAATTAACAACCAATTGTTTCAATCTTCACTGTTTCTTCTCT 600
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      TATTCCATTGCTCATGCATTTTCCAGACGTTTGCGTTTCATTTCAGTTCTTTCCTCATCG 660
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ---------------------------CTGGCTGGGCTAGGCAGATAGCAGGGCCGATAC 33
                                                                                   

consensus_11000#0      GTCTTCTGCCAAAATACATTCTATGTCTGACCCACACCATATACTACTTATATGGATATA 720
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      TCACTCAAGACTGCTCGTACGATTTTATGCATCATCGTTGCGCCGATCAATAAATTCGCT 93
                                                                                   

consensus_11000#0      AGTAGACCACACCACACTCGTCCCCCCTTTAAAGCATTCGTTCATGCGGTGGTTCTGCTC 780
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      -----------------------------------------TTTCATTTGTATACTGTAG 19
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------ATACGTTATAACAACTGGCGACGG 24
consensus_11000#2      TCTCTCTAATTGCACATTCATATATATTACGAGCGCACACGATATAACAACTGGCAACGG 153
                                                                                   

consensus_11000#0      GCCATGCCACTATCTTCTTTCACTGCAGTCTGTGCCA--AACTCTCCGTCAGAATGTCGA 838
consensus_11000#5      ---------------------------GTCTGTGTCA--AACTCTTCGTCAGAATGTCGA 31
consensus_11000#4      -----ACGATTGCGCTTGATTTCAGTTCTTTTTCTCATCGGTNTTCTGCCAAAATA-CAT 54
consensus_11000#3      TGAGCAAAACACTGGTTGGGGACAATCGAATGTATGTAAGCAAAAATTACAGACTATCTC 79
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      GGTAAAAAAAATTGGCTTTAACTTCCGATCAATTTCAGTTGCTAATCCAGAGACAAGAGC 84
consensus_11000#2      GGTAAAAAAA--TGGCTTTAACTTCCGATCAATTTCAGTTGCTAATCCAGAGACAAGAGC 211
                                                                                   

consensus_11000#0      GTCTGCGGCGCGCTGACCTCCATAGCTCCGTCGACCTGCCGGGGCACCAACATCCGCATC 898
consensus_11000#5      GTCTGCGGCGCGCTGACCTCCATAGCTCCGTCGACCTGCCGGGGCACCAACATCCGCATC 91
consensus_11000#4      TCCTATGCCTGACTCACACCATATACTACTTATATGGATATAAGTAGACCGAACCACACT 114
consensus_11000#3      AGTAAATTCTGATAACCAAACAATGAACAGTCAATTTGCAAATTAACAACCAATTGTTTC 139
consensus_11000#6      ---------------------TGTGGTCTACTTATATCCATATAAGTAGTATATGGTGTT 39
consensus_11000#1      AGCGTTTTAAAAAGAGTCAGTTGGATTTCATTGACAAGTTACACGCGAAGCTGCTGAATC 144
consensus_11000#2      AGCGTTTAAAAAAGAGTCACTTGGATTTCATTGACAAGTTACACGCGAAGCTGCTGAATC 271
                                                        *                          

consensus_11000#0      CACCCGGCACCTGGGACGTTCAACACCCGTACTCCACCGGCCTGCTGAGCCATCTACAT- 957
consensus_11000#5      CACCCGGCACCTGGGACGTTCAACACCCGTACTCCACCGGCCTGCTGAGCCATCTACAT- 150
consensus_11000#4      CGTCCCTCCTTTAAAGCATTCGTT-CATGCGGTGGTTCTGCTCGCCATGCCACTTTCTTG 173
consensus_11000#3      AATCTTCTCTGTTTCTTCTCTAAT-TTCATTGCTCATGCATTTTCCAAACGATTGCGCTT 198
consensus_11000#6      GGTC-AGTACATAGCA-ATGTATTTTGGGCAGAAGACCGAGCGAGGAAACCAACTGAATC 97
consensus_11000#1      A--CCTATGCTTTGGGGGTGCAACGGAAGTTGACTCATTGATTTCTAAATTGCGTACAGA 202
consensus_11000#2      A--CCCATGCTTTGGGGGTGCAACGGAAGTTGACGCATTGATTTCTAAATTGCGTACAGA 329
                          *       *      *                                         

consensus_11000#0      -----CCGATGTCCGCCCAGCAGCCGCACGTCCCACTGCTCCTCTCCGTCG-ACAGCACC 1011
consensus_11000#5      -----CCGATGTCCGCCCAGCAGCCGCACGTCCCACTGCTCCTCTCCGTCG-ACAGCACC 204
consensus_11000#4      TTTCACTGCAGTCTGTGCCGAAGTC-TTCGTGAGAATGTCGAGTCCTGCGGCGCGCTGAC 232
consensus_11000#3      CATTTCAGTTCTTTGCACATCGGTCTTCTGGCAAAATACATTCTATGTCTGACCAACACC 258
consensus_11000#6      GTAAGCAGCAA------------------------------------------------- 108
consensus_11000#1      GCTGGAAATCGATTGCAGAATGAATGAATATACCAGTGAAAGCCTCAATGAATCCATGAC 262
consensus_11000#2      ACTGGAAGTCGATTGCAGAACAAATGAATATGCAGAGGAAAGCCTCAATGAATCCGCGAA 389
                                                                                   

consensus_11000#0      CGCTACAGCCAACGCCGCCCCGCCAGAACAAGT--AGTCGAGTAGTTCGCGGCATATTAA 1069
consensus_11000#5      CGCTACAGTCAACGCCGCCCCGCCAGAACACTC-CACTCGA------------------- 244
consensus_11000#4      CTCCATAGCTG-CGTCGACCTGCCGTGGCACCAACATCCGCATGCACCCGGCACCTGGGA 291
consensus_11000#3      ATATACTACTTATATAGATATAAGTAGACCACACCACACTCGTCCCCCCTTTAAAGCATT 318
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      AAACAGTAAATTAAACGAAGCAATAGCAGTCATACATGATCAGCCCAGTAGTCCAGTACT 322
consensus_11000#2      AAACAGTAATTTAAATGCAGCAGTAGCAGTCCTACATGATCA------------------ 431
                                                                                   

consensus_11000#0      GAATCAAGGCTCTAGATATTACAGGATTCTATATGAAGTGTATCAGTTCCTTTAGGATTA 1129
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      CGTTGAACATCCGTACTCC----------------------------------------- 310
consensus_11000#3      C----------------------------------------------------------- 319
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      GTCTGTTTCAAAGACATGCCCTATAAACGGTCCAAATCATGTTATCCCCCANAAAGGACG 382
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      CAGATAAACTCTAAGTTCTCAAGTCACAAATATCACCAAATCTATGTGCTAAGATTTCTG 1189
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      TGCAAACAGTGAATTATCCTGTTCACAGAAAGAATATGTCTTGCTAAATGCTTATAAAAT 442
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      GCGACTCAATTCTAGTTTTTTATACCAAAAATCTAGTTAGATAATTTTTATAGAAATTTT 1249
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      TGCTGCAGTACCCGCCCACGAAGAAACGGGGAACAAATTGAGCAGTATTGTTAATACA-- 500
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      TACGGCGGCCGAACTATATACGTATTTATAGAACTCTCCCATANATCACAACACAGTACA 1309
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      TTTCATAAGATAATAAAACTTGTTAATTAGCTGAATACAGTGTGATGAAACAAATTTAAA 1369
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      GTGGAAAGTCGAATCAGGAAAAAATGGTTAGACGCACAGCTACTGTAGTGTGTGCTACTG 1429
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      ATGTCGATAGATATAAGTAGTATGTATCATCAACCGAAAGTAAAATGACTGGNCGTTAGA 1489
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      AGGTTAAGAANAACAGAAAGNAGGANAAAGAAAAAGGAGAATGATTGGTCTGGAAACGAG 1549
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      GGAACAATCAAGTGTGAGACAATTGATTGACATTTTGCAAATGAAGTGTTTACTGTATGG 1609
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      TTCTCAGATTTGACTAAGATATTCTGTAATTTTTTTGTCCGAATGCATTTGGTTGTTCCC 1669
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      ACTGCGTCCTCGCTAACTACCATACTATTAACATTGGTAATACCTAAAATAAATTGAATT 1729
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      TCTTTGTAACACAATTTGATATTTCTAATAAGCTTGATTAACAGAGAATATGTGGCTAGT 1789
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      AAACTCGGTCACCATTTGAAATCAAACGGTCATAGGATATCTCAGAAGAGATTCCCACCA 1849
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      CACGAAATACTTATGGTCCTTGAGAAACATTATGAGTCAAAATGTTTGAAGTATTCTTCA 1909
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      TTATACTTCGAAAACCATTCAGTTTAATGAGTTTTTGTTTACATGCGGACATTGAAGATC 1969
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      ATAATGTTGCATGATTCTACTTTCACTCCAAGCATTGTGTGTATCTTTTGTAACTGAGTT 2029
consensus_11000#5      ------------------------------------------------------------
consensus_11000#4      ------------------------------------------------------------
consensus_11000#3      ------------------------------------------------------------
consensus_11000#6      ------------------------------------------------------------
consensus_11000#1      ------------------------------------------------------------
consensus_11000#2      ------------------------------------------------------------
                                                                                   

consensus_11000#0      GTCTTTAATAA 2040
consensus_11000#5      -----------
consensus_11000#4      -----------
consensus_11000#3      -----------
consensus_11000#6      -----------
consensus_11000#1      -----------
consensus_11000#2      -----------