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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11080#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 30 consensus length = 1387 fasta sequence
[ACTGGCTGGCTAGTGACTTAAAAAAGTACTTATCAGAGCATCATCCCGCTCAACCTAGTGTCCTATCTCAAAGACTTATCCATGCGGGTAAGCTTTTGAAAGATGATACGTCAATCTCAGGCATTTGTACTCAGGTCGATGGGCTTCCTACAATCCATCTAGTATACCCCAACCCAAAACTAATGGGCGATTCTAATGTCAACAACTACCGAGCTGACAACACTTTGTTTAATATTCCACCTGAGCAAATGCATAAATATCAGCAGGCGTATTATCATTATTTGCAAACTTTTTATATGGAGAATCCTCCAATAAACCAAACTGAGTGCCATACGCAGGATTACTGTTACCCTTACTATTTTGGGACAGGGACTGTTATGCAAATGCTTC-CCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCACAAGCTCATAGCTCTTTACGCCAAACAACCACAAACAGTT-CAT-CTAGCAATATGCAACAG-TG-GATTCAAAGGGCGCAGGCACTTTTATCCAATTGGGGAGTGTTTAATGGTAATCAGCGTCAGAGGGAAGCGGATGAGGTATTACCTAACGAAGATGGGGTTAACCAAAGAGCTGACCAAATTCAACCCCAAGCAGCACAAGAAATGGTGCTTAATAATGCAATACGAAATAATGATAGACCCGATGAAGAGGTTAACGGGGTGGGAAATATGGACATAATTGATCGTTTTTACATGCTTTTTCGACTTTGTCTTTTCGTGGGGCTTTGTTTCGCATATTCATCTTTGGACAAGGCACTTATTGTGTTCTCAGTCGCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA-CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT-AGATATACTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAATTTGTCTTTTGTTTCACAAAGTGGCTTCACCTTCATGTCTGTACACACAACATTGGAAAGCAAAAACCTAGAAATTTGTTGAAGGTTCCATTCACAACCCANATTTATTTCAAAAATTTTTTGAGTACTT]
[+] EMBL CD116102 [ACTGGCTGGCTAGTGACTTAAAAAAGTACTTATCAGAGCATCATCCCGCTCAACCTAGTGTCCTATCTCAAAGACTTATCCATGCGGGTAAGCTTTTGAAAGATGATACGTCAATCTCAGGCATTTGTACTCAGGTCGATGGGCTTCCTACAATCCATCTAGTATACCCCAACCCAAAACTAATG ]
[-] EMBL CD111839 [ ATCAGAGCATCATTTCGCTCAACCTAGTGTCCTATCTCAAAGACTTATCCATGCGGGTAAGCTTTTGAAAGATGATACGTCAATCTCAGGCATTTGTACTCAGGTCGATGGGCTTCCTACAATCCATCTAGTATACCCCAACCCAAAACTAATGGGCGATTCTAATGTCA ]
[+] EMBL CD082277 [ GCTCAACCTAGTGTCCTATCTCAAAGACTTATTCATGCGGGTAAACCTTTGAAAGATGATACGTCAATCTCAGGCATTTGTACTCAGGTCGATGGGCTTCCTACAATCCATCTAGTATACCCCAACCCAAAACTAATGGGCGATTCTAATGTCAACAACTACCGAGCTGACAACACTTTGTTTAATATTCCACCTGAGCAAATGCATAAATATCAGCAGGCGTATTATCATTATTTGCAAACTTTTTATATGGAGAATCCTCCAATAAACCAAACTGAGTGCCATACGCAGGATTACTGTTACCCTTACTATTTTGGGACAGGGACTGTTATGCAAATGCTTC CCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCACAAGCTCATAGCTCTTTACGCCAAACAACCACAAACAGTT CAT CTAGCAATATGCAACAG TG GATTCAAAGGGCGCAGGCACTTTTATCCAATTGGGGAGTGTTTAATGGTAATCAGCGTCAGAGGGAAGCGGATGAAGTATTACCTAACGAAGATGGNGTTAACCAAAGAGCTGACCAAATTCAACC ]
[+] EMBL CD171049 [ CCTATCTCAAAGACTTATCCATGCGGGTAAGCTTTTGAAAGATGATACGTCAATCTCAGGCATTTGTACTCAGGTCGATGGGCTTCCTACAATCCATCTAGTATACCCCAACCCAAAACTAATGGGCGATTCTAATGTCAACAACTACCGAGCTGACAACACTTTGTTTAATATTCCACCTGAGCAAATGCATAAATATCAGCAGGCGTATTATCATTATTTGCAAACTTTTTATATGGAGAATCCTCCAATAAACCAAACTGAGTGCCATACGCAGGATTACTGTTACCCTTACTATTTTGGGACAGGGACTGTTATGCAAATGCTTC CCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCACAAGCTCATAGCTCTTTACGCCAAANAAACACAAACAGTT CAT CTAGCAATATGCAACAG TG GATTCAAA ]
[+] EMBL CD171051 [ CCTATCTCAAAGACTTATCCATGCGGGCTAGCTTTTGAAAGATGATACGTCAATCTCAGGCATTTGTACTCAGGTCGATGGGCTTCCTACAATCCATCCAGTATACCCCAACCCAAAACTAATGGGCGATTCTAATGTCAACAACTACCGAGCTGACAACACTTTGTTTAATATTCCACCTGAGCAAATGCATAAATATCAGCAGGCGTATTATCATTATTTGCAAACTTTTTATATGGAGAATCCTCCAATAAACCAAACTGAGTGCCATACGCAGGATTACTGTTACCCTTACTATTTTGGGACAGGGACTGTTATGCAAATGCTTC CCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCACAAGCTCATAGCTCTTTACGCCAAACAACCACAAACAGTT CAT CTAGCAATATGCAACAG TG GATTCAAAGGGCGCAGGCACTTTTATC ]
[-] EMBL CD170847 [ TACTCAGGTCGATGGGCTTCCTACAATCCATCTAGTATACCCCAACCCAAAACTAATGGGCGATTCTAATGTCAACAACTACCGAGCTGACAACACTTTGTTTAATATTCCACCTGAGCAAATGCATAAATATCAGCAGACGTATTATCATTATTTGCAAACTTTTTATATGGAGAATCCTCCAATAAACCAAACTGAGTGCCATACGCAGGATTACTGTTACCCTTACTATTTTGGGACAGGGACTGTTATGCAAATGCTTC CCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCACAAGCTCATAGCTCTTTACGCCAAACAACCACAAACAGTT CAT CTAGCAATATGCAACAG TG GATTCAAAGGGCGCAGGCACTTTT TCCAATTGGGGAGTGTTTAATGGTAATCAGCGTCAGAGGGAAGCGGATGAGGTATTACCTAACGAAGATGGGGTTAACCAAA ]
[-] EMBL CD170860 [ TACAATCCATCTAGTATACCCCAACCCAAAACTAATGGGCGATTCTAATGTCAACAACTACCGAGCTGACAACACTTTGTTTAATATTCCACCTGAGCAAATGCATAAATATCAGCAGGCGTATTATCATTATTTGCAAACTTTTTATATGGAGAATCCTCCAATAAACCAAACTGAGTGCCATACGCAGGATTACTGTTACCCTTACTATTTTGGGACAGGGACTGTTATGCAAATGCTTC CCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCACAAGCTCATAGCTCTTTACGCCAAACAACCACAAACAGTT CAT CTAGCAATATGCAACAG TG GATTCAAAGGGCGCAGGCACTTTTATCCAATTGGGGAGTGTTTAATGGTAATCAGCGTCAGAGGGAAGCGGATGAGGTATTACCTAACGAAGATGGGGTTAA ]
[-] EMBL CD170887 [ AACAACTACCGAGCTGACAACACTTTGTTTAATATTCCACCTGAGCAAATGCATAAATATCAGCAGGCGTATTATCATTACTTGCAAACTTTTTATATGGAGAATCCTCCAATAAACCAAACTGAGTGCCATACGCAGGATTACTGTTACCCTTACTATTTTGGGACAGGGACTGTTATGCATATGCTTC CCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCACAAGCTCATAGCTCTTTACGCCAAACAACCACAAACAGTT TAT CTAGCAATATGCAACAG TG GATTCAAAGGGCGCAGGCACTTTTATCCAATTGGGGAGTGTTTAATGGTAATCAGCGTCAGAGGGAAGCGGATGAGGTATTACCTAACGAAGATGGGGTTAA ]
[+] EMBL AI068059 [ TTCCACCTGAGCAAATGCATAAATATCAGCAGGCGTATTATCATTATTTGCAAACTTTTTATATGGAGAATCCTCCAATAAACCAAACTGAGTGCCATACGCAGGATTACTGTTACCCTTACTATTTTGGGACAGGGACTGTTATGCAAATGCTTC CCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCACAAACTCATAGCTCTTTACGCCAAACAACCACAAACAGTT CAT CTAGCAATATGCAACAG TG GATTCAAAGGGCGCAGGCACTTTTATCCAATTGGGGAGTGTTTAATGGTAATCAGCGTCAGAGGGAAGCGGATGAGGTATTACCTA ]
[+] EMBL CD142221 [ TGCCATACGCAGGATTACTGTTACCCTTACTATTTTGGGACAGGGACTGTTATGCAAATGCTTC CCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCACAAACTCATAGCTCTTTACGCCAAACAACCACAAACAGTT CAT CTAGCAATATGCAACAG TG GATTC ]
[-] EMBL CD129034 [ GACTGTTATGCAAATGCTTC CCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCGCAAGCTCATAGCTCTTTACGCCAAACAACCAC AATTGTTNNNTNNNNNNNATATGCAACAG TG GATTCAAAGGGCGCAGGCACTTTTATCCAATTGGGGAGTGTTTAATGGTAATCAGCGTCAGAGGGAAGCGGATGAGGTATTACCTAACGAAGATGGGGTTAACCAAAGAGCTGACCAAATTCAACCCCAAGCAGCACAAGAAATGGTGCTTAATAATGCAATACGAAATAATGATAGACCCGATGAAGAGGTTAACGGGGTGGGAAATATGGACATAATTGATCGTTTTTACATGCTTTTTCGACTTTGTCTTTTCGTGGGGCTTTGTTTCGCATATTCATCTTTGGACAAGGCACTTATTGTGTTCTCAGTCGCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGC ]
[+] EMBL CD198327 [ GCTTCTCCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCACAAACTCATAGCTCTTTACGCCAAACAACCACAAACAGTT CAT CTAGCAATATGCTACAGATGTCATTC ]
[-] EMBL CD116175 [ TTTNACATGC TTTTCGACTTTGTCTNTTCGTGGGGCTNTGTTNCGCATATTCATCTTTGGACAAGGCACTTATTGTGTTCTCAGTCGCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGACCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATACTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAATTTGTCTTTTGTTTCACAAAGTGGC ]
[+] EMBL CD081970 [ CTTATTGTGTTCTCAGTCGCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATACTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAATTTGTCTTTTGTTTCACAAAGTGGCTTCACCTTCATGTCTGTACACACAACATTGGAAAGCAAAAACCTAGAAATTTGTTGAAGGTTCCATTCACAACCCANAT ]
[+] EMBL CD143559 [ CGCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATAT ]
[+] EMBL CD143467 [ CGCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATAT ]
[-] EMBL CD143469 [ GCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATA ]
[-] EMBL CD143455 [ GCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATA ]
[-] EMBL CD143436 [ GCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATA ]
[-] EMBL CD143521 [ GCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCACCGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGGTCAAGCAAACGTTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATA ]
[-] EMBL CD143563 [ GCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATA ]
[-] EMBL CD143507 [ GCTGCTTATGCATATCTGTACAATATCTACAGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCATCGACGACAGCAACAAAGTCCTCAAGGTGCACAAAGCAATTTGAACCGTCCAGCAAGTGGACAATCGGATAATCAGCAAAACCAGTTTGTTCAGGAATCTACAGGAGATCAGGCAAACGCTAACTTACGTGGTGAACAAGAATATAGGTTTACAAGGATAACTACATATCTGCGATTGGCAGCAAATCATTATTATCAGTTCTTTTCAGCTGTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATA ]
[+] EMBL CD134143 [ ATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCc ]
[+] EMBL CD145231 [ GCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATACTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAATTTGTCTTTTGT ]
[-] EMBL CD075882 [ TGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATACTGACCCTGACACCTCACTTTTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAATTTGTCTTTTGTTTCACAAAGTGGCTTCACCTTCATGTCTGTACACACAACA TGGAAAGCAAAAACCTAGAAATTTGTT AAGGTTCCATTCACAACCCAAATTTATTTCAAAAATTTTTTGAGTACTT]
[+] EMBL CD194472 [ AGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATACTGAC ]
[+] EMBL CD135629 [ AGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATACTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAATTTGTCTTTTGTTTCACAAAGTGG ]
[+] EMBL AI882662 [ CAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAACCTGGATTATTGAACACAATATTTTATTTAATCTGTAATCCTGAGATATACTGACCCTGACACCTCACTTCTTATCCATGTTTTATTTTTAATTa ]
[-] EMBL CD139590 [ naaaatccnCAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTANTCAGTTCTCTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGGTTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATACTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAATTTGTCTTTTGTTTCACAAAGTGGCTTCACCTTCATGTCTGTA ]
[+] EMBL CD123955 [ GTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATACTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTATTTTGTCTTTTGCTTCACAAAGTGGCTTCACCTTCATGTCTGTACATTTTACATTGGAAAGC ]
consensusID : consensus_11080#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 402 fasta sequence
[TGGCGAGCCGAAACCAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACATACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAACTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCTAGATATACTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAAAAAAAAAAAAAAAAA]
[-] EMBL AI395200 [TGGCGAGCCGAAACCAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACATACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAACTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCTAGATATACTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11080#0 ACTGGCTGGCTAGTGACTTAAAAAAGTACTTATCAGAGCATCATCCCGCTCAACCTAGTG 60
consensus_11080#1 ------------------------------------------------------------
consensus_11080#0 TCCTATCTCAAAGACTTATCCATGCGGGTAAGCTTTTGAAAGATGATACGTCAATCTCAG 120
consensus_11080#1 ------------------------------------------------------------
consensus_11080#0 GCATTTGTACTCAGGTCGATGGGCTTCCTACAATCCATCTAGTATACCCCAACCCAAAAC 180
consensus_11080#1 ------------------------------------------------------------
consensus_11080#0 TAATGGGCGATTCTAATGTCAACAACTACCGAGCTGACAACACTTTGTTTAATATTCCAC 240
consensus_11080#1 ------------------------------------------------------------
consensus_11080#0 CTGAGCAAATGCATAAATATCAGCAGGCGTATTATCATTATTTGCAAACTTTTTATATGG 300
consensus_11080#1 ------------------------------------------------------------
consensus_11080#0 AGAATCCTCCAATAAACCAAACTGAGTGCCATACGCAGGATTACTGTTACCCTTACTATT 360
consensus_11080#1 ------------------------------------------------------------
consensus_11080#0 TTGGGACAGGGACTGTTATGCAAATGCTTCCCGGGAACTATAATTTCCCTAACAATGCTT 420
consensus_11080#1 ------------------------------------------------------------
consensus_11080#0 ATGTCCCACAAGCTCATAGCTCTTTACGCCAAACAACCACAAACAGTTCATCTAGCAATA 480
consensus_11080#1 ------------------------------------------------------------
consensus_11080#0 TGCAACAGTGGATTCAAAGGGCGCAGGCACTTTTATCCAATTGGGGAGTGTTTAATGGTA 540
consensus_11080#1 ------------------------------------------------------------
consensus_11080#0 ATCAGCGTCAGAGGGAAGCGGATGAGGTATTACCTAACGAAGATGGGGTTAACCAAAGAG 600
consensus_11080#1 ------------------------------------------------------------
consensus_11080#0 CTGACCAAATTCAACCCCAAGCAGCACAAGAAATGGTGCTTAATAATGCAATACGAAATA 660
consensus_11080#1 ------------------------------------------------------------
consensus_11080#0 ATGATAGACCCGATGAAGAGGTTAACGGGGTGGGAAATATGGACATAATTGATCGTTTTT 720
consensus_11080#1 ------------------------------------------------------------
consensus_11080#0 ACATGCTTTTTCGACTTTGTCTTTTCGTGGGGCTTTGTTTCGCATATTCATCTTTGGACA 780
consensus_11080#1 ------------------------------------------------------------
consensus_11080#0 AGGCACTTATTGTGTTCTCAGTCGCTGCTTATGTATATCTGTACAATATCTACCGCAGAT 840
consensus_11080#1 ------------------------------------------------------------
consensus_11080#0 ATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGA-CCGCAAC-AAAATCCCCAAGG 898
consensus_11080#1 --------------------------------TGGCGAGCCGAAACCAAAATCCCCAAGG 28
* *** *** *** *************
consensus_11080#0 TGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCT 958
consensus_11080#1 TGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCT 88
************************************************************
consensus_11080#0 TGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAG 1018
consensus_11080#1 TGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACATACGTGGTGAACAAGAATCGAG 148
************************************* **********************
consensus_11080#0 GTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTC 1078
consensus_11080#1 GTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTC 208
************************************************************
consensus_11080#0 AGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTC 1138
consensus_11080#1 AGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTC 268
************************************************************
consensus_11080#0 AATATCTTCTAACTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCTAGATATA 1198
consensus_11080#1 AATATCTTCTAACTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCTAGATATA 328
************************************************************
consensus_11080#0 CTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAAT 1258
consensus_11080#1 CTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAAA 388
***********************************************************
consensus_11080#0 TTGTCTTTTGTTTCACAAAGTGGCTTCACCTTCATGTCTGTACACACAACATTGGAAAGC 1318
consensus_11080#1 AAA------AAAAAAAAAAA---------------------------------------- 402
* ***
consensus_11080#0 AAAAACCTAGAAATTTGTTGAAGGTTCCATTCACAACCCANATTTATTTCAAAAATTTTT 1378
consensus_11080#1 ------------------------------------------------------------
consensus_11080#0 TGAGTACTT 1387
consensus_11080#1 ---------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||