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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11081#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 24 consensus length = 1115 fasta sequence
[CATGTAATCTGCTAACCGTTATTAACAATTTACNAATTAACCCTTTACTACCTTTAGCTTTTTGNACAGATATTATATAAGTGTAAAATTAAGGAAAAAAGCGATGTAGTTGTTATTATTATTTAGCAGTGCAAGTATGTGAAATGTTTATTAGGNATTTAATCATGTCATTTAAC-ATTAACGCTCAATCATATGACCG-ATAACCAAGGTTATACCTTAGTATTTTTGTTACTTAGATCAGCCATAATACGATGAATTTAGAATATGCTTAAGGAACAATGAAACGGGGAAAAAGCAGTTGTGAAAAAGAAAATAAAAGCATTCCATTGGCAAACAAATATTGACATGCTGAGCTTTATAATTAAAATTCCACTACGATTGTGATTATTATTATTAGAATTAAAAATTTGTCCCCCCAAAAGATTGGTCATAGTTTTAATAAATTGATAGATATGTTTTAGTATTTTTCTTGATAAGTAA-TTAATTTAATCAAGAATCATTCTTTGTTTGCCCA-TTGTCAT-GCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCT-TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA-GACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTTCCATAA-TTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGCAAAGTAGCACTCCATCTTTCAATATCTCTTCATACGGCTTAGAGCGGTCCACCTTAGTGCCAAGTACGGCCTCTATCCAATCAAGTACACTTTGTTCTTGATCTCTGTCTCGCTTTCCTTCAAGCTTCCTTTTGACTTGAGCACTAAGTCCACTAGCTAAAGGTTGATTGGCCATAAATTTGAAGAAAAAATGTACTTAAAACAACTTTCGTTTTTCTCCCTCGTGCCGAAT]
[+] EMBL AA999260 [CATGTAATCTGCTAACCGTTATTAACAATTTACNAATTAACCCTTTACTACCTTTAGCTTTTTGNACAGATATTATATAAGTGTAAAATTAAGGAAAAAAGCGATGTAGTTGTTATTATTATTTAGCAGTGCAAGTATGTGAAATGTTTATTAGGNATTTAATCATGTCATTTAACNATTAACGCTCAATCATATGACCG ATAACC ]
[+] EMBL CD073962 [ TAGTTGTTTTTATTATTTAGCAGTGCACGTATGTGAAATGTTTATTAGGAATTTAATCATGTCATTTAAC ATTAACGCTCAATCATATGAACGAATAACCAAGGTTATACCTTAGTATTTTTGTTACTTAGATCAGCCATAATACGATGAATTTAGAATATGCTTAAGGAACAATGAAACGGGGAAAAAGCAGTTGTGAAAAAGAAAATAAAAGCATTCCATTGGCAAACAAATATTGACATGCTGAGCTTTATAATTAAAATTCCACTACGATTGTGATTATTATTATTAGAATTAAAAATTTGTCCCCCCAAAAGATTGGTCATAGTTTTAATAAATTGATAGATATGTTTTAGTATTTTTCTTGATAAGTAA TTAATTTAATCAAGAATCATTCTTTGTTTGCCCA TTGTCAT GCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCT TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA GACATTGTGTCACT ]
[-] EMBL CD168948 [ ATAAAAGCATTCCATTGGCAAACAAATATTGACATGCTGAGCTTTATAATTAAAATTCCACTACGATTGTGATTATTATTATTAGAATTAAAAATTTGTCCCCCCAAAAGATTGGTCATAGTTTTAATAAATTGATAGATATGTTTTAGTATTTTTCTTGATAAGTAA TTAATTTAATCAAGAATCATTCTTTGTTTGCCCA TTGTCAT GCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCT TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA GACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTTCCATAA TTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGCAAAGTAGCACTCCATCT ]
[+] EMBL CD169299 [ CATTCCATTGGCAAGCAAATATTGACATGCTGAGCTTTATAATTAAAATTCCACTACGATTGTGATTATTATTATTAGAATTAAAAATTTGTCCCCCCAAAAGATTGGTCATAGTTTTAATAAATTGATAGATATGTTTTAGTATTTTTCTTGATAAGTAA TTAATTTAATCAAGAATCATTCTTTGTTTGCCCA TTGTCAT GCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCT TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA GACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTTCCATAA TTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGCAAAGTAGCACTCCATCTTTCAATATCTC ]
[+] EMBL CD169774 [ CATTCCATTGGCAAACAAATATTGACATGCTGAGCTTTATAATTAAAATTCCACTACGATTGTGATTATTATTATTAGAATTAAAAATTTGTCCCCCCAAAAGATTGGTCATAGTTTTAATAAATTGATAGATATGTTTTAGTATTTTTCTTGACAAGTAA TTAATTTAATCAAGAATCATTCTTTGTTTGCCCA TTGTCAT GCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAGACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCT TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA GACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCCTGAAATGCATTGATATTTTCCATAA TTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGCAAAGTAGCACTCCATC ]
[+] EMBL CD169314 [ CATTCCATTGGCAAACAAATATTGACATGCTGAGCTTTATAATTAAAATTCCACTACGATTGCGATTATTATTATTAGAATTAAAAATTTGTCCCCCCAAAAGATTGGTCATAGTTTTAATAAATTGATAGATATGTTTTAGTATTTTTCTTGATAAGTAA TTAATTTAATCAAGAATCATTCTTTGTTTGCCCA TTGTCAT GCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCT TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA GACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTTCCATAA TTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGCAAAGTAGCACTCCATC ]
[+] EMBL CD169313 [ CATTCCATTGGCAAACAAATATTGACATGCTGAGCTTTATAATTAAAATTCCACTACGATTGCGATTATTATTATTAGAATTAAAAATTTGTCCCCCCAAAAGATTGGTCATAGTTTTAATAAATTGATAGATATGTTTTAGTATTTTTCTTGATAAGTAA TTAATTTAATCAAGAATCATTCTTTGTTTGCCCA TTGTCAT GCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCT TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA GACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTTCCATAA TTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGCAAAGTAGCACTCCATC ]
[+] EMBL CD169776 [ CATTCCATTGGCAAACAAATATTGACATGCTGAGCTTTATAATTAAAATTCCACTACGATTGTGATTATTATTATTAGAATTAAAAATTTGTCCCCCCAAAAGATTGGTCATAGTTTTAATAAATTGATAGATATGTTTTAGTATTTTTCTTGACAAGTAA TTAATTTAATCAAGAATCATTCTTTGTTTGCCCA TTGTCAT GCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCT TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA GACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCCTGAAATGCATTGATATTTTCCATAA TTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGCAAAGTAGCACTCCATC ]
[+] EMBL CD169571 [ CATTCCATTGGCAAACAAATATTGACATGCTGAGCTTTATAATTAAAATTCCACTACGATTGTGATTATTATTATTAGAATTAAAAATTTGTCCCCCCAAAAGATTGGTCATAGTTTTAATAAATTGATAGATATGTTTTAGTATTTTTCTTGACAAGTAA TTAATTTAATCAAGAATCATTCTTTGTTTGCCCA TTGTCATGGCCAGCTTGTGAAGTACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCT TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA GACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAAa ]
[-] EMBL CD169451 [ AAATTCCACTACGATTGTGATTATTATTATTAGAATTAAAAATTTGTCCCCCCAAAAGATTGGTCATAGTTTTAATAAATTGATAGATATGTTTTAGTATTTTTCTTGATAAGTAA TTAATTTAATCAAGAATCATTCTTTGTTTGCCCA TTGTCAT GCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCT TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA GACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCGTGAAATGCATTGATATTTTCCATAA TTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGCAAAGTAGCACTCCATCT ]
[-] EMBL CD169523 [ ATTATTATTAGAATTAAAAATTTGTCCCCCCAAAAGATTGGTCATAGTTTTAATAAATTGATAGATATGTTTTAGTATTTTTCTTGATAAGTAA TTAATTTAATCAAGAATCATTCTTTGTTTGCCCA TTGTCAT GCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAAACTAACCACGTTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCT TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA GACATTGTGTCACTTGAGCAATACCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTTCCATAA TTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGCAAAGTAGCACTCCATCT ]
[-] EMBL CD068676 [ TTATTAGAATTAAAAATTTGTCCCCCCAAAAGATTGGTCATAGTTTTAATAAATTGATAGATATGTTTTAGTATTTTTCTTGATAAGTAA TTAATTTAATCAAGAATCATTCTTTGTTTGCCCA TTGTCAT GCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCT TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA GACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTTCCATAA TTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGCAAA TCGCACTCCATCT ]
[-] EMBL CD079703 [ TAAAAATTTGTCCCCCCAAAAGATTGGTCATAGTTTTAATAAATTGATAGATATGTTTTAGTATTTTTCTTGATAAGTAA TTAATTTAATCAAGAATCATTCTTTGTTTGCCCA TTGTCAT GCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCT TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA GACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTTCCATAA TTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGCAAAGTAGCACTCCATCTTTCAATATCTCTTCATACGGCTTAGAGCGGTCCACCTTAGTGCCAAGTACGGCCTCTATCCAATCAAGTACACTTTGTTCTTGATCTCTGTCTCGCTTTCCTTCAAGCTTCCTTTTGACTTGAGCACTAAGTCCACTAGCTAAAGGTTGATTGGCCATAAATTTGAAGAAAAAATGTACTTAAAACAACTTTCGTTTTTCTCCCTCGTGCCGAAT]
[-] EMBL CD068648 [ TAGTTTTAATAAATTGATAGATATGTTTTAGTATTTTTCTTGATAAGTAA TTAATTTAATCAAGAATCATTCTTTGTTTGCCCA TTGTCAT GCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCTGTGAGCTAATTTTGGACCTGAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA GACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTCGCCCGACATC ]
[-] EMBL CD068613 [ TTTTAATAAATTGATAGATATGTTTTAGTATTTTTCTTGATAAGTAA TTAATTTAATCAAGAATCATTCTTTGTTTGCCCA TTGTCAT GCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCT TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA GACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTTCCATAA TTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGCAAAGTAGCACTCCATCT ]
[-] EMBL CD068679 [ TTTTAATAAATTGATAGATATGTTTTAGTATTTTTCTTGATAAGTAA TTAATTTAATCAAGAATCATTCTTTGTTTGCCCA TTGTCAT GCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCT TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAACGACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTTCCATAACTTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGC AAGTAGCACTCCATCT ]
[-] EMBL CD168926 [ TTTTAATAAATTGATAGATATGTTTTAGCATTTTTCTTGATAAGTAA TTAATTTAATCAAGAATCATTCTTTGTTTGCCCA TTGTCAT GCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCT TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA GACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTTCCATAA TTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGCAAAGTAGCACTCCATCT ]
[-] EMBL CD169499 [ TTTTAATAAATTGATAGATATGTTTTAGTATTTTTCTTGATAAGTAA TTAATTTAATCAAGAATCATTCTTTGTTTGCCCA TTGTCAT GCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCATCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCT TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA GACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTTCCATAA TTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGCAAAGTAGCACTCCATCT ]
[-] EMBL CD068646 [ TTTTAATAAATTGATAGATATGTTTTAGTATTTTTCTTGATAAGTAACTTAATTTAATCAAGAATCATTCTTTGTTTGCCCACTTGTCAT GCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAA TGTTCGTCAG ]
[-] EMBL CD131425 [ TTAATAAATTGATAGATATGTTTTAGTATTTTTCTTGATAAGTAA TTAATTTAATCAAGAATCATTCTTTGTTTGCCCA TTGTCAT GCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCT TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA GACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGC ]
[+] EMBL CD142965 [ AAGCACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCT TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA GACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTTCCATAA TTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAATTTTGCAAAGTAGCAC ]
[+] EMBL CD170765 [ TTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCT TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA GACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTTCCATAA TTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGCAAAGTAGCACTCCATCTTTCAATATCTCTTCATACGGCTTAGAGCGGTCC ]
[+] EMBL CD072556 [ TCGTCAGTGAATTCACGTTTATTCTCT TGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAA GACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTTCCATAA TTTTANATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGC ]
[-] EMBL CD121741 [ CCAAGAGCATAAA GACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATACATTGATATTTTCCATAA TTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGTAAAGTAGCACTCCATCTTTCAATATCTCTTCATACGGCTTAGAGCGGTCCA ]
consensusID : consensus_11081#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 497 fasta sequence
[TACCTCCCTCAGGCGGAAAAAGATGGTCATAGTTTTAATAAATGATAGATATGTTTTAGTATTTTTCTTGATAAGTAATTAATTTAATCAAGAATCATTCTTTGTTTGCCCATTGTCATGCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCTTGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAAGACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTTCCATAATTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTCTAGTTTATTGATAACTTTGCAAAGTAGCACTCCATC]
[+] EMBL CD068655 [TACCTCCCTCAGGCGGAAAAAGATGGTCATAGTTTTAATAAATGATAGATATGTTTTAGTATTTTTCTTGATAAGTAATTAATTTAATCAAGAATCATTCTTTGTTTGCCCATTGTCATGCCAGCTTGTGAAGCACCTTTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCTTGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAAGACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTTCCATAATTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTCTAGTTTATTGATAACTTTGCAAAGTAGCACTCCATC]
[+] EMBL CD189680 [ GAAGCACCTTTGTTTGTGCCATATTGT AACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTGAATTCACGTTTATTCTCTTGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGATGTGTTTGACATGTTCTTCCAAGAGCATAAAGACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTTCCATAATTTTAAATGGCATAGTAGCGTTCTCATTGATTCT ]
[+] EMBL CD068591 [ tgcgGGATGTGTTTGACATGTTCTTCCAAGAGCATAAAGACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTACCATAATTTTAAATGGCATAGTAGCGTACTCATTGATTCTCTTAACACTACCAGGTTACAGTTTATTGACAACTTTGCACAGTAGCACTCCATC]
consensusID : consensus_11081#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 390 fasta sequence
[ACGGCCTCTATCCAATCAAGTACACTTTGTTCTTGATCTCTGTCTCGCTTTCCTTCAAGCTTCCTTTTGACTTGAGCACTAAGTCCACTAGCTAAAGGTTGATTGGCCATAAATTTGAAGAAAAAATGTACTTAAAACAACTTTCGTTTTTGGTACACTTAGTATTCGATTTTCTCTTGAATTTACCACATTAATTTAACCAATGTAATTCATTGAATTCGACTTGAACCAATCAAATTCACATTAGCGCACATTTATAATTGTGTGTGACAGTCACGAATTGAACCATTTGAAATTATTTGAAAGTAGGGAATTCTTTATTATAAAACAAATTTTCTATCAGATATATGGCTTGAAATAGATCAAGGTCATTTGTAGAATTTATATTTG]
[-] EMBL AI975864 [ACGGCCTCTATCCAATCAAGTACACTTTGTTCTTGATCTCTGTCTCGCTTTCCTTCAAGCTTCCTTTTGACTTGAGCACTAAGTCCACTAGCTAAAGGTTGATTGGCCATAAATTTGAAGAAAAAATGTACTTAAAACAACTTTCGTTTTTGGTACACTTAGTATTCGATTTTCTCTTGAATTTACCACATTAATTTAACCAATGTAATTCATTGAATTCGACTTGAACCAATCAAATTCACATTAGCGCACATTTATAATTGTGTGTGACAGTCACGAATTGAACCATTTGAAATTATTTGAAAGTAGGGAATTCTTTATTATAAAACAAATTTTCTATCAGATATATGGCTTGAAATAGATCAAGGTCATTTGTAGAATTTATATTTG]
consensusID : consensus_11081#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 226 fasta sequence
[GAGCTCGGTACCCATAAAGACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTTCCATAATTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGCAAAGTAGCACTCCATC]
[+] EMBL CD169133 [GAGCTCGGTACCCATAAAGACATTGTGTCACTTGAGCAATATCTTTTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCAGTAGGCACACCGTATGCTTTAATTGCTTCTTGAAATGCATTGATATTTTCCATAATTTTAAATGGCATAGTAGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGCAAAGTAGCACTCCATC]
consensusID : consensus_11081#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 226 fasta sequence
[TATTATTTAGCAGTGGAAGTATGTGAAATGTTTATTAGGGATTTNATNATGTCATTTAANATTAAGGGTTAATTATATGAAGGGATAAACAAGGTTATAACTTAGTATTTTTGTTAATTAGATTAGGGATAATACGGTGGATTTTGAATATGGTTAAAGGGAAAATGAAAGGGGGGAAAAGGAGTTGTGAAATAGGNAATTAAAGGTTTTAATTGGGAAAAAAATA]
[+] EMBL AA999616 [TATTATTTAGCAGTGGAAGTATGTGAAATGTTTATTAGGGATTTNATNATGTCATTTAANATTAAGGGTTAATTATATGAAGGGATAAACAAGGTTATAACTTAGTATTTTTGTTAATTAGATTAGGGATAATACGGTGGATTTTGAATATGGTTAAAGGGAAAATGAAAGGGGGGAAAAGGAGTTGTGAAATAGGNAATTAAAGGTTTTAATTGGGAAAAAAATA]
consensusID : consensus_11081#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 147 fasta sequence
[GTAAAAGTACNCCCTCTATCCAATAAGTACACTTTGTTCCTTGATCCTCCTGTCCTAGCGTTTTCCTTAAGCTTCCTTTTACTTAGAACTAACTAGCTAAAGGTTGATTGGCCATAAATTTGAAGAAAAAATGTACTTAAAACAACT]
[+] EMBL SMAA69238 [GTAAAAGTACNCCCTCTATCCAATAAGTACACTTTGTTCCTTGATCCTCCTGTCCTAGCGTTTTCCTTAAGCTTCCTTTTACTTAGAACTAACTAGCTAAAGGTTGATTGGCCATAAATTTGAAGAAAAAATGTACTTAAAACAACT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11081#1 ------------------------------------------------------------
consensus_11081#3 ------------------------------------------------------------
consensus_11081#0 CATGTAATCTGCTAACCGTTATTAACAATTTACNAATTAACCCTTTACTACCTTTAGCTT 60
consensus_11081#4 ------------------------------------------------------------
consensus_11081#2 ------------------------------------------------------------
consensus_11081#5 ------------------------------------------------------------
consensus_11081#1 ------------------------------------------------------------
consensus_11081#3 ------------------------------------------------------------
consensus_11081#0 TTTGNACAGATATTATATAAGTGTAAAATTAAGGAAAAAAGCGATGTAGTTGTTATTATT 120
consensus_11081#4 ------------------------------------------------------------
consensus_11081#2 ------------------------------------------------------------
consensus_11081#5 ------------------------------------------------------------
consensus_11081#1 ------------------------------------------------------------
consensus_11081#3 ------------------------------------------------------------
consensus_11081#0 ATTTAGCAGTGCAAGTATGTGAAATGTTTATTAGGNATTTAATCATGTCATTTAACATTA 180
consensus_11081#4 ------------------------------------------------------------
consensus_11081#2 ------------------------------------------------------------
consensus_11081#5 ------------------------------------------------------------
consensus_11081#1 ------------------------------------------------------------
consensus_11081#3 ------------------------------------------------------------
consensus_11081#0 ACGCTCAATCATATGACCGATAACCAAGGTTATACCTTAGTATTTTTGTTACTTAGATCA 240
consensus_11081#4 ------------------------------------------------------------
consensus_11081#2 ------------------------------------------------------------
consensus_11081#5 ------------------------------------------------------------
consensus_11081#1 ------------------------------------------------------------
consensus_11081#3 ------------------------------------------------------------
consensus_11081#0 GCCATAATACGATGAATTTAGAATATGCTTAAGGAACAATGAAACGGGGAAAAAGCAGTT 300
consensus_11081#4 ------------------------------------------------------------
consensus_11081#2 ------------------------------------------------------------
consensus_11081#5 ------------------------------------------------------------
consensus_11081#1 ------------------------------------------------------------
consensus_11081#3 ------------------------------------------------------------
consensus_11081#0 GTGAAAAAGAAAATAAAAGCATTCCATTGGCAAACAAATATTGACATGCTGAGCTTTATA 360
consensus_11081#4 ------------------------------------------------------------
consensus_11081#2 ------------------------------------------------------------
consensus_11081#5 ------------------------------------------------------------
consensus_11081#1 -----------------------------------------TACCTCCCTCAGGCGGAAA 19
consensus_11081#3 ------------------------------------------------------------
consensus_11081#0 ATTAAAATTCCACTACGATTGTGATTATTATTATTAGAATTAAAAATTTGTCCCCCCAAA 420
consensus_11081#4 ------------------------------------------------------------
consensus_11081#2 ------------------------------------------------------------
consensus_11081#5 ------------------------------------------------------------
consensus_11081#1 AAGATGGTCATAGTTTTAATAAAT-GATAGATATGTTTTAGTATTTTTCTTGATAAGTAA 78
consensus_11081#3 ------------------------------------------------------------
consensus_11081#0 AGATTGGTCATAGTTTTAATAAATTGATAGATATGTTTTAGTATTTTTCTTGATAAGTAA 480
consensus_11081#4 ------------------------------------------------------------
consensus_11081#2 ------------------------------------------------------------
consensus_11081#5 ------------------------------------------------------------
consensus_11081#1 TTAATTTAATCAAGAATCATTCTTTGTTTGCCCATTGTCATGCCAGCTTGTGAAGCACCT 138
consensus_11081#3 ------------------------------------------------------------
consensus_11081#0 TTAATTTAATCAAGAATCATTCTTTGTTTGCCCATTGTCATGCCAGCTTGTGAAGCACCT 540
consensus_11081#4 ------------------------------------------------------------
consensus_11081#2 ------------------------------------------------------------
consensus_11081#5 ------------------------------------------------------------
consensus_11081#1 TTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTG 198
consensus_11081#3 ------------------------------------------------------------
consensus_11081#0 TTGTTTGTGCCATATTGTAAACTAATCACATTCGCACCTTCACGTAATTGTTCGTCAGTG 600
consensus_11081#4 ------------------------------------------------------------
consensus_11081#2 ------------------------------------------------ACGGCCTCTATC 12
consensus_11081#5 ----------------------------------------GTAAAAGTACNCCCTCTATC 20
consensus_11081#1 AATTCACGTTTATTCTCTTGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGA 258
consensus_11081#3 ------------------------------------------------------------
consensus_11081#0 AATTCACGTTTATTCTCTTGAGCTAATTTTGGACCTAAAGTAGGGCCATTGTATTCCGGA 660
consensus_11081#4 ------------------------------------------------------------
consensus_11081#2 CAATCAAGTACACTTTGTTC-TTGATCT--CTGTCTCGC--TTTCCTTCAAGCTTCCTTT 67
consensus_11081#5 CAAT-AAGTACACTTTGTTCCTTGATCCTCCTGTCCTAGCGTTTTCCTTAAGCTTCCTTT 79
consensus_11081#1 TGTGTTTGACATGTTCTTCCAAGAGCATAAAGACATTGT--GTCACTTGAGCAATATCTT 316
consensus_11081#3 -------------GAGCTCGGTACCCATAAAGACATTGT--GTCACTTGAGCAATATCTT 45
consensus_11081#0 TGTGTTTGACATGTTCTTCCAAGAGCATAAAGACATTGT--GTCACTTGAGCAATATCTT 718
consensus_11081#4 ----TATTATTTAGCAGTGGAAGTATGTGAAATGTTTATT-AGGGATTTNATNATGTCAT 55
consensus_11081#2 TGACTTGAGCACTAAGTCCACTAGCTAAAGGTTGATTGGCCATAAATTTGAAGAAAAAAT 127
consensus_11081#5 T-ACTT-AGAACTAA-----CTAGCTAAAGGTTGATTGGCCATAAATTTGAAGAAAAAAT 132
** ** * *
consensus_11081#1 TTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCA--GTAGGCACACCGTATGCTT- 373
consensus_11081#3 TTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCA--GTAGGCACACCGTATGCTT- 102
consensus_11081#0 TTTTCTCGAATAAATCAACTGTTTGAAAAACATCAGCA--GTAGGCACACCGTATGCTT- 775
consensus_11081#4 TTAANATTAA-GGGTTAATTATATGAAGGG-ATAAACAAGGTTATAACTTAGTATTTTTG 113
consensus_11081#2 GTACTTAAAACAACTTTCGTTTTTGGTACACTTAGTATTCGATTTTCTCTTGAATTTACC 187
consensus_11081#5 GTACTTAAAACAACT--------------------------------------------- 147
* ** *
consensus_11081#1 -TAATTGCTTCTTGAA----ATGCATTGATATT---TTCCATAATTTTAAATGGCATAGT 425
consensus_11081#3 -TAATTGCTTCTTGAA----ATGCATTGATATT---TTCCATAATTTTAAATGGCATAGT 154
consensus_11081#0 -TAATTGCTTCTTGAA----ATGCATTGATATT---TTCCATAATTTTAAATGGCATAGT 827
consensus_11081#4 TTAATTAGATTAGGGAT--AATACGGTGG-ATT---TTGAATATGGTTAAAGGGAAAATG 167
consensus_11081#2 ACATTAATTTAACCAATGTAATTCATTGAATTCGACTTGAACCAATCAAATTCACATTAG 247
consensus_11081#5 ------------------------------------------------------------
consensus_11081#1 AGCGTTCTCATTGATTCTCTTAACACTACCAGGTTCTAGTTTATTGATAACTTTGCAAAG 485
consensus_11081#3 AGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGCAAAG 214
consensus_11081#0 AGCGTTCTCATTGATTCTCTTAACACTACCAGGTTTTAGTTTATTGATAACTTTGCAAAG 887
consensus_11081#4 AAAGGGGGGAAAAGGAGTTGTGA-AATAGGNAATTAAAGGTTTT-----AATTGGGAAAA 221
consensus_11081#2 CGCACATTTATAATTGTGTGTGACAGTCACGAATTGAACCATTTGAAATTATTTGAAAGT 307
consensus_11081#5 ------------------------------------------------------------
consensus_11081#1 TAGCACTCCATC------------------------------------------------ 497
consensus_11081#3 TAGCACTCCATC------------------------------------------------ 226
consensus_11081#0 TAGCACTCCATCTTTCAATATCTCTTCATACGGCTTAGAGCGGTCCACCTTAGTGCCAAG 947
consensus_11081#4 AAATA------------------------------------------------------- 226
consensus_11081#2 AGGGAATTCTTTATTATAAAACAAATTTTCTATCAGATATATGGCTTGAAATAGATCAAG 367
consensus_11081#5 ------------------------------------------------------------
consensus_11081#1 ------------------------------------------------------------
consensus_11081#3 ------------------------------------------------------------
consensus_11081#0 TACGGCCTCTATCCAATCAAGTACACTTTGTTCTTGATCTCTGTCTCGCTTTCCTTCAAG 1007
consensus_11081#4 ------------------------------------------------------------
consensus_11081#2 GTCATTTGTAGAATTTATATTTG------------------------------------- 390
consensus_11081#5 ------------------------------------------------------------
consensus_11081#1 ------------------------------------------------------------
consensus_11081#3 ------------------------------------------------------------
consensus_11081#0 CTTCCTTTTGACTTGAGCACTAAGTCCACTAGCTAAAGGTTGATTGGCCATAAATTTGAA 1067
consensus_11081#4 ------------------------------------------------------------
consensus_11081#2 ------------------------------------------------------------
consensus_11081#5 ------------------------------------------------------------
consensus_11081#1 ------------------------------------------------
consensus_11081#3 ------------------------------------------------
consensus_11081#0 GAAAAAATGTACTTAAAACAACTTTCGTTTTTCTCCCTCGTGCCGAAT 1115
consensus_11081#4 ------------------------------------------------
consensus_11081#2 ------------------------------------------------
consensus_11081#5 ------------------------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||