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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11095#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 29 consensus length = 982 fasta sequence
[ACCCGGTAT-ACCAC-CACCAAG-TAGAATAATTAGAATTAATCTGA-CAA-CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC-TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA-ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC-AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG-CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAGAATTTACAGCGACAGCCCGCTGATGCTCGCGTCCACAATCTGGTGCTATAGCCAACACTGCACGATTGAGGACTCGTTTGTGAATACGCAGTCTCCGGAGAGTCCCTTCATCCTCAGATAGAACTTGTTTTAGGAACTCATCGTAAGTAATGAACTGGTTTCCATCTTCATCTGCCGAGTCCACAAGATTGTGAACTTTTGATTCTGGGAGGTCAGACTTCCCGAGAAGTCTTTTCAAATCAGACAATGGAATACCATCTTTTGTACTGTACTGATCAAAGGTGGGTTTGAACTTTTTATCCAAATAAGTGCGCAGATTGCTAGACCGCGTACTTGACATTCTGACCATAAAAAGTGAGTATACCAGCTGGTTTATATAG]
[+] EMBL CD125916 [ACCCGGTATCACCAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTACAGGATCTTTTAGCCATCCCTCC ]
[+] EMBL CD125879 [ACCCGGTATCACCAA CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAAT ]
[+] EMBL CD125908 [ACCCGGTAT ACCAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCGAGTACAACTTGAAGTTAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAGCCAATAGTTA ]
[+] EMBL CD126181 [ACCCGGTAT AC G CACCAAGATAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCg ]
[+] EMBL CD126168 [ACCCGGTATCACCAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCCAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGT ]
[+] EMBL CD126114 [ACCCGGTA A CAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCAAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGGAATCTCAG CA ]
[+] EMBL CD125911 [ CCCGGTAT A CAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGGTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AGTTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTA ]
[-] EMBL CD125900 [gCCCGGTATCACCAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAAC AGACAA ]
[+] EMBL CD125931 [ aCCGGTAT ACCAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAGTGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGT ]
[+] EMBL CD126049 [ CCCGTAT ACCAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATNACCATTATGAATGAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGATTGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAG ]
[+] EMBL CD126154 [ aCCGGT T A CAG CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTACATAAAAACTGGAATCTCAGg ]
[+] EMBL CD126158 [ CCGGTATCACCACGCACCAAG TAGAATAATTAGAATTAATCTGAGCAAGCACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCCGTGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAG ]
[-] EMBL CD164830 [ AATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAGTAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CA ]
[-] EMBL CD126009 [ AATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGCAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAAT ]
[-] EMBL CD126151 [ GCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAACAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAcgacaggct ]
[+] EMBL CD126028 [ ggAATGACCGCGAGTAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAAT ]
[+] EMBL CD125956 [ aCCAACCTGTGGATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTANATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGA ]
[-] EMBL CD125940 [ ccCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTACAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAGAATTTACAGCGAC ]
[-] EMBL CD125982 [ CAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACGACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGCTTTGTTGCTATAAGTg ]
[-] EMBL CD126019 [ C TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAACAAATTGTAAGGTA ]
[+] EMBL CD094875 [ AACAAATAA ACTAATCCAACTCGCCAAAATTTATGGACGATTTCAAGTAAAAGACCAAGTACAACTCGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAGAATTTACAGCGACAGCCCGCTGATGCTCGCGTCCACAATCTGGTGCTATAGCCAACACTGCACGATTGAGGACTCGTTTGTGAAT ]
[+] EMBL CD095363 [ AACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAGAATTTACAGCGACAGCCCGCTGATGCTCGCGTCCACAATCTGGTGCTATAGCCAACACTGCACGATTGAGGACTCGTTTGTGAAT ]
[+] EMBL CD094763 [ AACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAGAATTTACAGCGACAGCCCGCTGATGCTCGCGTCCACAATCTGGTGCTATAGCCAACACTGCACGATTGAGGACTCGTTTGTGAAT ]
[+] EMBL CD125936 [ gAAATAAGACTAATCCTAGTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGACATAAGCCTGTATA ]
[+] EMBL CD125955 [ AGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGCAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAAT ]
[-] EMBL CD191389 [ AGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAGAATTTACAGCGACAGCCCGCTGATGCTCGCGTCCACAATCTGGTGCTATAGCCAACACTGCACGATTGAGGACTCGTTTGTGAATACGCAGTCTCCGGAGAGTCCCTTCATCCTCAGATAGAACTTGTTTTAGGAACTCATCGTAAGTAATGAACTGGTTTCCATCTTCATCTGCCGAGTCCACAAGATTGTGAACTTT ]
[-] EMBL CD094609 [ GGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAAAATTTACAGCGACAGCCCGCTGATGCCCGCGTCCACAATCTGGTGCTATAGCCAACACTGCACGATTGAGGACTCGTTTGTGAATACGCAGTCTCCGGAGAGTCCCTTCATCCTCAGATAGAACTTGTTTTAGGAACTCATCGTAAGTAATGAACTGGTTTCCATCTTCATCTGCCGAGTCCACAAGATTGTGAACTTTTGATTCTGGGAGGTCAGACTTCCCGAGAAGTCTTTTCAAATCAGACAATGGAATACCATCTTTTGTACTGTACTGATCAAAGGTGGGTTTGAACTTTTTATCCAAATAAGTGCGCAGATTGCTAGACCGCGTACTTGACATTCTGACCATAAAAAGTGAGTATACCAGCTGGTTTATATAG]
[-] EMBL BG931300 [ ggTCCGGAGAGTCCCTTCATCCTCAGATAGAACTTGTTTTAGGAACTCATCGTAAGTAATGAACTGGTTTCCATCTTCATCTGCCGAGTCCACAAGTTTGTGAACTTTTGATTCTGGGAGGTCAGACTTCCCGAGAAGTCTTTTCAAATCAGACAATGGAATACCATCTTTTGTACTGTACTGATCAAAGGTGGGTTTGAACTTTTTATCCAAATAAGCGCGCAGATTGCTAGAC ]
[+] EMBL CD156680 [ GAGAGTCCCTTCATCCTCAGATAGAACTTGTTTTAGGAACTCATCGTAAGTAATGAACTGGTTTCCATCTTCATCTGCCGAGTCCACAAGATTGTGAACTTTTGATTCTGGGAGGTCAGACTTCCCGGGAAGTCTTTTCAAATCAGACAATGGAATACCATCTTTTGTACTGTACTGATCAAAGGTGGGTTTGAACTTTTTATCCAAATAAGTGCGCAGATTGCTAGACCGCGTGCTTGACATTCTGACCATAAAAAGTGAGTATACCAGCTGGTTTATATA ]
consensusID : consensus_11095#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 483 fasta sequence
[ACGGGTATACCACCGACAAGTACAATATTAGAGATGAATCTGACACGAACACTTGATATAAAGCTTTAAACGAGATCTTATAACCATCCCTCCTGCATTATATCCCAATTCATCATTACCGTATCTTAATGAGCGCCAGTAAGTGCATAAGAGCCTCCAATATCTCCTGACAATAAAACTAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCTATAACGCCTAACAAATAAAGCTATATCCAACTCGCCCCTATTTATTAGCGATTTCAAGTTACAGACCAAGTACAACTTGAAGTAAACCATTGACAGCTATATGCACATACCGATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAA]
[+] EMBL CD126050 [ACGGGTATACCACCGACAAGTACAATATTAGAGATGAATCTGACACGAACACTTGATATAAAGCTTTAAACGAGATCTTATAACCATCCCTCCTGCATTATATCCCAATTCATCATTACCGTATCTTAATGAGCGCCAGTAAGTGCATAAGAGCCTCCAATATCTCCTGACAATAAAACTAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCTATAACGCCTAACAAATAAAGCTATATCCAACTCGCCCCTATTTATTAGCGATTTCAAGTTACAGACCAAGTACAACTTGAAGTAAACCATTGACAGCTATATGCACATACCGATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAA]
[+] EMBL CD126096 [ ATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTG ]
consensusID : consensus_11095#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 341 fasta sequence
[GGTAATGCCCTGGCGACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAAACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAACAATAGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGGTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGTGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAGCAATAGTTAT]
[+] EMBL CD126055 [GGTAATGCCCTGGCGACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAAACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAACAATAGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGGTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGTGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAGCAATAGTTAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11095#0 ACCCGGTATACCACCACCAAGTAGAATAATTAGAATTAATCTGACAACACCACTTGATAT 60
consensus_11095#2 ------------------------------------------------------------
consensus_11095#1 ---ACGGGTATACCACCGACAAGTACAATATTAGAGATGAATCTGACACGAACACTTGAT 57
consensus_11095#0 AAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGT 120
consensus_11095#2 ------------------------------------------------------------
consensus_11095#1 ATAAAGCTTTAAACGAGATCTTATAACCATCCCTCCTGCATTATATCCCAATTCATCATT 117
consensus_11095#0 AGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCCTGCCAACAAAACAAA 180
consensus_11095#2 ----------------------------------------GGTAATGCCCTGGCGACAAA 20
consensus_11095#1 ACCGTATCTTAATGAGCGCCAGTAAGTGCATAAGAGCCTCCAATATCTCCTGACAATAAA 177
* * * ***
consensus_11095#0 -----TGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAAA-C 234
consensus_11095#2 -----TGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAAA-C 74
consensus_11095#1 ACTAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCTATAACGCCTAACAAATAAAGC 237
********************************* ******************* *
consensus_11095#0 TA-ATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAA 293
consensus_11095#2 TA-ATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAA 133
consensus_11095#1 TATATCCAACTCGCCCCTATTTATTAGCGATTTCAAGTTACAGACCAAGTACAACTTGAA 297
** ************ ****** * *********** * *******************
consensus_11095#0 GTAAACAATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATC 353
consensus_11095#2 GTAAACAATAGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATC 193
consensus_11095#1 GTAAACCATTGACAGCTATATGCACATACCGATTATGAATAAACATATAGGTTAAAAATC 357
****** ** ** ***** ********* * *****************************
consensus_11095#0 TCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAG 413
consensus_11095#2 TCCATGGTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAG 253
consensus_11095#1 TCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAG 417
****** *****************************************************
consensus_11095#0 ATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAA 473
consensus_11095#2 ATGACGCTGTAACGATGCTGGATGTGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAA 313
consensus_11095#1 ATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAA 477
************************ ***********************************
consensus_11095#0 TAAAAACTGCAATCTCAGCAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGT 533
consensus_11095#2 TAAAAACTGCAATCTCAGCAATAGTTAT-------------------------------- 341
consensus_11095#1 TAAAAA------------------------------------------------------ 483
******
consensus_11095#0 CATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCAT 593
consensus_11095#2 ------------------------------------------------------------
consensus_11095#1 ------------------------------------------------------------
consensus_11095#0 CGTAACCAGAATTTACAGCGACAGCCCGCTGATGCTCGCGTCCACAATCTGGTGCTATAG 653
consensus_11095#2 ------------------------------------------------------------
consensus_11095#1 ------------------------------------------------------------
consensus_11095#0 CCAACACTGCACGATTGAGGACTCGTTTGTGAATACGCAGTCTCCGGAGAGTCCCTTCAT 713
consensus_11095#2 ------------------------------------------------------------
consensus_11095#1 ------------------------------------------------------------
consensus_11095#0 CCTCAGATAGAACTTGTTTTAGGAACTCATCGTAAGTAATGAACTGGTTTCCATCTTCAT 773
consensus_11095#2 ------------------------------------------------------------
consensus_11095#1 ------------------------------------------------------------
consensus_11095#0 CTGCCGAGTCCACAAGATTGTGAACTTTTGATTCTGGGAGGTCAGACTTCCCGAGAAGTC 833
consensus_11095#2 ------------------------------------------------------------
consensus_11095#1 ------------------------------------------------------------
consensus_11095#0 TTTTCAAATCAGACAATGGAATACCATCTTTTGTACTGTACTGATCAAAGGTGGGTTTGA 893
consensus_11095#2 ------------------------------------------------------------
consensus_11095#1 ------------------------------------------------------------
consensus_11095#0 ACTTTTTATCCAAATAAGTGCGCAGATTGCTAGACCGCGTACTTGACATTCTGACCATAA 953
consensus_11095#2 ------------------------------------------------------------
consensus_11095#1 ------------------------------------------------------------
consensus_11095#0 AAAGTGAGTATACCAGCTGGTTTATATAG 982
consensus_11095#2 -----------------------------
consensus_11095#1 -----------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||