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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11219#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 37 consensus length = 883 fasta sequence
[TACGCAGTACGGTAATGCAGTTGCATGGCATGTTTATTTTTTTTTTTTTTTTTTTTTTACACAGTAAAGAACAATTTTAATATTTACTGATTTCAATAACAAGACTATTTGACACTGTTGGCTAATGCTAAACCGACCAAAAGTTATCTAC-T-CTGAAATACAGAAAACCTATT-TGTTTTAGTCCAGCAGCATGTTTTTGC-GTATGTTAGCATACACTTCTTTCATTTCCTTCCATTTTAAAGCCATATTGTCCATCATTTCATCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGA-GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGCAACGAGATTAGGATTTTCTTTAGTA--CT-AGACTTGA-TTTCTCCACGACTGGTGTCC-GGTTCTACTTCTGAAATCTCCGCGATAAGATCTTCTTGCAACCACGACAGCTTACTTTCCACAGGCACATTCAAGTCTCCAGAA---ACTGTATCGAAGAGGTTACGGTTGTCGGTAATAAACTTAAGCATTCTGTCTTTTATTCCACCGGCAACAGCGGGACTCACTGAAGACGAAAATCGAGGTAGTAATCTCAAAATTGATGACGCTAGCCTGAAACTTGGACGGAGAGCCATTAAAATGCAAACCACTGGCGCCTGCACGGTAAAC-AAGTCAGATCCC]
[+] EMBL AI975916 [TACGCAGTACGGTAATGCAGTTGCATGGCATGTTTATTTTTTTTTTTTTTTTTTTTTTACACACAAAAGAACAATTTTAATATTTACTGATTTTAATAACACGACTATTTGACACT ]
[+] EMBL CD074789 [ GTAAAGAACAATTTTAATATTTACTGATTTCAATAACAAGACTATTTGACACTGTTGGCTAATGCTAAACCGACCAAAAGTTATCTAC T CTGAAATACAGAAAACCTATT TGTTTTAGTCCAGCAGCATGTTTTTGC GTATGTTAGCATACACTTCTTTCATTTCCTTCCATTTTAAAGCCATATTGTCCATCATTTCATCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGA GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGCAACGAGATTAGGATTTTCTTTAGTA CT AGACTTGA TTTCTCCACGACTGGTGTCC GGTTCTACTTCTGAAATCTCCGCGATAAGATCTTCTTGCAACCACGACAGCTTACT ]
[+] EMBL CD073118 [ GTAAAGAACAATTTTAATATTTACTGATTTCAATAACAAGACTATTTGACACTGTTGGCTAATGCTAAACCGACCAAAAGTTATCTAC T CTGAAATACAGAAAACCTATT TGTTTTAGTCCAGCAGCATGTTTTTGC GTATGTTAGCATACACTTCTTTCATTTCCTTCCATTTTAAAGCCATATTGTCCATCATTTCATCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGA GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAAAACTAGCAACGAGATTAGGATTTTCTTT ]
[-] EMBL AI740234 [ TAAAGAACAATTTTAATATTTACTGATTTCAATAACAAGACTATTTGACACTGTTGGCTAATGCTAAACCGACCAAAAGTTATCTAC T CTGAAATACAGAAAACCTATT TGTTTTAGTCCAGCAGCATGTTTTTGC GTATGTTAGCATACACTTCTTTCATTTCCTTCCATTTTAAAGCCATATTGTCCATCATT ]
[+] EMBL CD145674 [ TAGTGCTAAACCGACCAAAAGTTCTCTAC T CTGAAACACAAAACACCTATTGTGTTTAACTCCACCACCGTGTTTTTGCTGTATGTTACCATACACTTCTTTAATTTCCTTCCATTTAAAAGCCATATTGTCCATCATTTCATCCGCACCCGGGGACTTCGGTGTCATAAATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGA GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGCAACGAGATTAGGATNTTCTTTAGTA CT AGACTTGA TTTCTCCACGACTGGTGTCC GGTTCTACTTCTGAAATCTCCGCGATAAGATCTTCTCGC ACCACGACAGCTTACTTTCCACA GCACATTCAAGTCTCCAGAA ACTGTATCGAAGA GTTACGGTTGTCGG AATAAACTTAAGCTTTCTGTCTTT ]
[+] EMBL CD145388 [ AATGCTAAACCGACCAAAAGTTATCTAC T CTGAAATACAGAAAACCTATT TGTTTTAGTCCAGCAGCATGTTTTTGC GTATGTTAGCATACACTTCTTTCATTTCCTTCCATTTTAAAGCCATATTGTCCATCATTTCATCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAG ]
[+] EMBL CD202443 [ GCTAAACCCACCAAAAGTTATCTAC T CTGAACTACAGAAAACCTATT TGTTTTAGCCCAGCAGCATGTTTGTGC GTATGATAACATACACTTCTTACATTCCCTTCCATTTTAAAGCCATATTGTCCATCATTTTATCCGCACCCGGGGACTTCGGTGTCATAAATTTTCCTTCTGCTAAAAGGATGTTAAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTAATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGA GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGC ]
[+] EMBL CD145669 [ GCTAACCCGACCAAAAGTTATCTAC T CTGAAATACAGAAAACCTATT TGTTTTAGTCCAACAGCATGTTTTTGC GTATGTTAGCATACACTTCTTTCATTCCCTTCCATTCTAAAGCCATATTGTCCATCATTTCATCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAG ]
[+] EMBL CD145679 [ GCTAACCCGACCAAAAGTTATCTAC TGCTGAAATACAGAAAACCTATT TGTTTTAGTCCAGCAGCATGTTTGTGC GTATGTTAGCATACACTTCTTTCATTTCCTTCCATTTTAAAGCCATATTGTCCATCATTTCATCCGCACCCGGGGACTTCGGTGACATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCCCGCTCCTCCTCATAGCGCTGCTCATCAACGA GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATT ]
[+] EMBL CD145715 [ CTAACCCGACCAAAAGTTATCTAC T CTGAAATACAGAAAACCTATT TGTTTTAGTCCAACAGCATGTTTTCGC GTATGTTAACATACACTTCTTTCATTCCCTTCCATTTTAAAGCCATATTGTCCATCATTTCATCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAG ]
[+] EMBL CD145641 [ CTAAACCGACCAAAAGTTATCTAC T CTGAAATACAAAAAACCTATT TGTTTTATTCCAACAACATGTTTTTGC GTATGTTAACATACACTTCTTTCATTTCCTTCCATTTTAAAGCCATATTGTCCATCATTTCATCCGCACCCGGGGACTTCGGTGTCATAAATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGA GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGCAACGAGATTAGGATTTTCTTTAGTA CT AGACTTGA TTTCTCCACGACTGGTGTCC GGTTCTACTTCTGAAATCTCCGCGATAA ]
[+] EMBL CD145699 [ CTAACCCGACCAAAGGTTATCTAC T CTGAAATACAAAAAACCTATT TGTTTTAGCCCACCAGCATGTTTTTGC GTATGTTACCATACACTTCTTTCATTTCCTTCCATTTAAAAGCCATATTGTCCATCATTTCATCCGCACCCGGGGACTTCGGGGTCATAAATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGA GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACA ]
[+] EMBL CD145580 [ AAACCGACCAAAAGTTATCTAC T CTGAAATACAGAAAACCTATT TGTTTTAGTCCAGCAGCATGTTTTTGC GTATGTTAGCATACACTTCTTTCATTTCCTTCCATTTTAAAGCCATATTGTCCATCATTTCATCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGA GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGCAACGAGATTAGGATTTTCTTTAGTA CT AGACTTGA TTTCTCCACGACTGGTGTCCNGGTTCTACTTCTGAAATCTCCGCGATAAGATCTTCTTGCAACCACGACAGCTTACTTTCCACAGGCACATTCAAGTCTCCAGAAACTACTGTATCGAAGAAGGTACGGTTGTCGGTAATAAACTT AGCATCCTGTCTTTa ]
[+] EMBL CD145391 [ AAACCGACCAAAAGTTATCTAC TACTGAAATACAGAAAACCTATT TGTTTTAGTCCAGCAGCATGTTTTTGC GTATGTTAGCATACACTTCTTTCATTTCCTTCCATTTTAAAGCCATATTGTCCATCATTTCATCCGCACCCAGGGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGA GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGAGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGCAACGAGATTAGGATTTTCTTTAGTA CT AGACTTGA TTTCTCCACGACTGGTGTCC GGTTCTACTTCTGAAATCTCCGCGATAA ]
[+] EMBL CD145419 [ AAACCGACCAAAAGTTATCTAC TACTGAAATACAGAAAACCTATT TGTTTTAGTCCAGCAGCATGTTTTTGC GTATGTTAGCATACACTTCTTTCATTTCCTTCCATTTTAAAGCCATATTGTCCATCATTTCATCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTGTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAG ]
[+] EMBL CD145450 [ AAACCGACCAAAAGTTATCTACGT CTGAAATACAGAAAACCTATT TGTTTTAGTCCAGCAGCATGTTTTTGC GTATGTTAGCATACACTTCTTTCATTTCCTTCCATTTTAAAGCCATATTGTCCATCATTTCATCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAG ]
[-] EMBL CD145573 [ AACCGACCAAAAGTTATCTAC T CTGAAATACAGAAAACCTATT TGTTTTAGTCCAGCAGCATGTTTTTGC GTATGTTAGCATACACTTCTTTCATTTCCTTCCATTTTAAAGCCATATTGTCCATCATTTCATCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCCTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGC ]
[-] EMBL CD145590 [ AACCGACCAAAAGTTATCTAC T CTGAAATACAGAAAACCTATT TGTTTTAGTCCAGCAGCATGTTTTTGC GTATGTTAGCATACACTTCTTTCATTTCCTTCCATTTTAAAGCCATATTGTCCATCATTTCATCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGC ]
[-] EMBL CD145481 [ AACCGACCAAAAGTTATCTAC T CTGAAATACAGAAAACCTATT TGTTTTAGTCCAGCAGCATGTTTTTGC GTATGTTAGCATACACTTCTTTCATTTCCTTCCATTTTAAAGCCATATTGTCCATCATTTCATCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGC ]
[-] EMBL CD153280 [ ACCGACCAAAAGTTATCTAC T CTGAAATACAGANAACCTATT TG TTTAGTCCAGCAGCATGTTTNTGC GTATGTTAGCATACACTTCTTTCATTTCCTTCCATTNTAAAGCCATATTGTCCATCATTTCATCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGA GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGCAACGAGATTAGGATTTTCTTTAGTA CT AGACTTGA TTTCTCCACGACTGGTGTCC GGTTCTACTTCTGAAATCTCCGCGATAAGATCTTCTTGCAACCACGACAGCTTACTTTCCACAGGCACATTCAAGTCTCCAGAA ACTGTATCGAAGAGGTTACGGTTGTCGGTAATAAACTTAAGCATTCTGTCTTTTA ]
[-] EMBL CD150494 [ gTTCCCTTCTATTTTAAAGCCATATTGTCCATCATTTCATCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTGATCTTTAATTTTATTCCACTTGTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGA GAAGGAACCAGTGACCACTAAAGCAAAGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGAATACAGTGACATTGTTGAACAGCTATGACATTAGAACTAGCAACGAG ]
[-] EMBL CD152088 [ cAAAGCCATATTGTCCATCATNTCATCCGCACCCGGAGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTGTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGA GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGCAACGAGATTAGGATTTTCTTTAGTA ]
[-] EMBL CD152152 [ CATATTGTCCATCATTTCATCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGA GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGCAACGAGATTAGGATTTTCTTTAGTA CT AGACTTGATTTTCTACACAAGTGG ]
[-] EMBL CD060114 [ ATCATTTCATCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCGTTCTCCAAGATATCCAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTGTAATTTTAATCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGACGAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACTATACCAAAGATTTTAGATGATGATCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGCAACGAGATTAGGATTTTCTTTAGTA CT AGACTTGA TTTCTCCACGACTGGTGTCC GG ]
[+] EMBL CD092063 [ TCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGA GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGCAACGAGATTAGGATTTTCTTTAGTA CT AGACTTGA TTTCTCCACGACTGGTGTCC GGTTCTACTTCTGAAATCTCCGCGATAAGATCTTCTTGCAACCACGACAGCTTACTTTCCACAGGCACATTCAAGTCTCCAGA ]
[+] EMBL CD132335 [ CACCCGGGGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAAC ]
[+] EMBL CD152069 [ GTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGA GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGNCACGAGATTAGGATTTTCTTTAGTA CT AGACTT ]
[-] EMBL CD145493 [ aTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTNTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGA GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGACGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGCAACGAGATTAGGATTTTCTTTAGTA CT AGACTTGA TTTCTCCACGACTGGTGTCC GGTTCTACTTCTGAAATCTCCGCGATAAGATCTTCTTGCAACCACGACAGCTTACTTTCCACAGGCACATTCAAGTCTCCAGAAACTACTGTATCGAAGAGGTTACGGTTGTCGGTAATAAACTTAAGCATTCTGTCTTTTA ]
[-] EMBL AI976841 [ CAAGATATCAAATCGTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGA GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGCAACGAGATTAGGATTTTCTTTAGTA CT AGACTTGA TTTCTCCACGACTGGTGTCC GGTTCTACTTCTGAAATCTCCGCGATAAGATCTTCTTGCAACCACGACAGCTTACTTTCCACAGGCACATTCAAGTCTCCAGAAACTACTGTATCGAAGAGGTTACGGTTGTCGGTAATAAACTTAAGCATTCTGTCTTTTATTCCACCGGCAACAGCGGGACTCACTGAAGACGAAAATCGAGGTAGTAATCTCAAAATTGATGACGCTAGCCTGAAACTTGGACGGAGAGCCATTAAAATGCAAACCACTGGCGCCTGCACGGTAAACAAAGTCAGATCCC]
[-] EMBL CD152067 [ TATCAAGTCGTTTAAGCAGATCAGCATCTTCTGGTTTATCTCTAATNTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGA GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGCAACGAGATTAGGATTTTCTTTAGTA ]
[-] EMBL CD155019 [ GTTTAAGCAGATCAGCATTTTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGA GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGCAACGAGATTAGGATTTTCTTTAGTA CT AGACTTGA TTTCTCCACGACTGGTGTCC GGTTCTACTTCTGAAATCTCCGCGATAAGATCTTCTTGCAACCACGACAGCTTACTTTCCACAGGCACATTCAAGTCTCCAGAA ACTGTATCGAAGAGGTTACGGTTGTCGGTAATAAACTTAAGCATTCCGTCTTTTATTCCACCGGCAACAGCGGGACTCACTGAAGACGAAAATCGAGGTAGTAATCTCAAAATTGATGACGCTAGCCTGAAACTTGGACGGAGAGCCATTAAAATGCAAACCACTGGCGCCTGCACGGTAAAC AAGTCAGATCCC]
[-] EMBL CD139001 [ GCTCATCAACGA GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGCAACGAGATTAGGATTTTCTTTAGTA CT AGACTTGA TTTCTCCACGACTGGTGTCC GGTTCTACTTCTGAAATCTCCGCGATAAGATCTTCTTGCAACCACGACAGCTTACTTTCCACAGGCACATTCAAGTCTCCAGAA ACTGTATCGAAGAGGTTACGGTTGTCGGTAATAAACTTAAGCATTCTGTCTTTT ]
[-] EMBL CD138962 [ GAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGCAACGAGATTAGGATTTTCTTTAGTA CT AGACTTGA TTTCTCCACGACTGGTGTCC GGTTCTACTTCTGAAATCTCCGCGATAAGATCTTCTTGCAACCACGACAGCTTACTTTCCACAGGCACATTCAAGTCTCCAGAA ACTGTATCGAAGGGGTTACGGTTGTCGGTAATAAACTTAAGCATTCTGTCTTTT ]
[+] EMBL CD111504 [ ATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACGGTGACATTGTTGAACAGCTCTGACATTAGAACTAGCAACGAGATTAGGATTTTCTTTAGTA CT AGACTTGA TTTCTCCACGACTGGTGTCC GGTTCTACTTCTGAAATCTCCGCGATAAGATCTTCTTGCAACCACGACAGCTTACTTTCCACAGGCACATTCAAGTCTCCAGAA ACTGTATCGAAGAGGTTACGGTTGTCGGTAATAAACTTAAGCATTCTGTCTTTTATTCCACCGGCAACAGCGGGACCCACTGAAGACGAAAATCGAGGTAGTAATCTCAAAATTGATGACGCTAGCCTGAAACTTGGACGGAGAGCCATTAAAATGCAAACCACTGGCGCCTGCACGGTAAAC AA ]
[-] EMBL CD122122 [ ATTAGGATTTTCTTTAGTA GT AGACTTGA TTTCTCCACGACTGGTGTCC GGTTGTACTTGTGAAATCTCCGCGATAAGATCTTCTTGCAACCACGACAGTTTACTTTCCACAGGCACATTCAAGTCTCCAGAAAGTACTGTATCGAAGAGGTTACGGTTGTCGGTAATAAACTTAAGCATTCTGTCTTTTATTCCACCGGCAACAGCGGGAGTCACTGAAGACGAAAATCTAGGTAGTAACCTCAAAATTGAAGACGCTAGCCTGAAACTTGGACGGAGAGCCATTAAAAAGCAAACCACTGGCGCCTGCACGGTAAACAAAGTCAG ]
[+] EMBL CD187218 [ atcgaggTAGTAATCTCAAAATTGA TTTCTCCACGACTGGTGTCC GGTTCTACTTCTGAAATCTCCGCGATAAGATCTTCTTGCAACCACGACAGCTTACTTTCCACAGGCACATTCAAGTCTCCAGAA ACTGTATCGAAGAGGTTACGGTTGTCGGTAATAAACTTAAGCATTCTGTCTTTTATTCCACCGGCAACAGCGGGACTCACTGAAGACGAAAATCGAGG ]
[-] EMBL CD154901 [ GGGACTCACTGAAGACGAAAATCGAGGTAGTAATCTCAAAATTGATGACGCTAGCCTGAAACTTGGACGCAGAGCCATTAAAATGCAAACCAATGGCGCCTGCACGGTACAC AAGTCAGATCCC]
consensusID : consensus_11219#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 773 fasta sequence
[TAAAGACCAATTTAATATTTCTGATTTCATAACAAGACTATTTGACACTGTGGNTAATGCTAAACGACCAAAAGTATCTATCTGAATGCGTATGTAGGCATACACTTCTTTCATTTCCTTCCATNTTANAGCCATATGTCNCATCATNTCATCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTNTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGAGAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTNNNNNNNNNNNNNNNNNCGAGATTAGGATTTTCTTTAGTACTAGACTTGATTTCTCCACGACTGGTGTCCGGTTCTACTTCTGAAATCTCCGCGATAAGATGTTCTTGCAACCACGACAGCTTACTTTCCACAGGCACATTCAAGTCTCCAGAATGTCGGTAATAAACTTAAGCATTCTGTCTTTTATTCCACCGGCAACAGCGGGACTCACTGAAGACGAAAATCGAGGTAGTAATCTCAAAATTGATGACGCTAGCCTGAAACTTGGACGGAGAGCCATTAAAATGCAAACCACTGGCGCCTGCACGGTAAACAAAGTCAGATCCCTTCAAAGTCACCCGCCGTTCCG]
[-] EMBL CD080957 [TAAAGACCAATTTAATATTTCTGATTTCATAACAAGACTATTTGACACTGTGGNTAATGCTAAACGACCAAAAGTATCTATCTGAATGCGTATGTAGGCATACACTTCTTTCATTTCCTTCCATNTTANAGCCATATGTCNCATCATNTCATCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTCTGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATTNTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGAGAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTNNNNNNNNNNNNNNNNNCGAGATTAGGATTTTCTTTAGTACTAGACTTGATTTCTCCACGACTGGTGTCCGGTTCTACTTCTGAAATCTCCGCGATAAGATGTTCTTGCAACCACGACAGCTTACTTTCCACAGGCACATTCAAGTCTCCAGAATGTCGGTAATAAACTTAAGCATTCTGTCTTTTATTCCACCGGCAACAGCGGGACTCACTGAAGACGAAAATCGAGGTAGTAATCTCAAAATTGATGACGCTAGCCTGAAACTTGGACGGAGAGCCATTAAAATGCAAACCACTGGCGCCTGCACGGTAAACAAAGTCAGATCCCTTCAAAGTCACCCGCCGTTCCG]
consensusID : consensus_11219#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 577 fasta sequence
[TCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGAGAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGCAACGAGATTAGGATTTTCTTTAGTACTAGACTTGATTTCTCCACGACTGGTGTCCGGCTAAAGTAGTCGATCGATTTAATTAACGTCACATACTTCTACTTCTGAAATCTCCGCGATAAGATCTTCTTGCAACCACGACAGCTTACTTTCCACAGGCACATTCAAGTCTCCAGAAACTGTATCGAAGAGGTTACGGTTGTCGGTAATAAACTTAAGCATTCTGTCTTTTATTCCACCGGCAACAGCGGGACTCACTGAAGACGAAAATCGAGGTAGTAATCTCAAAATTGATGACGCTAGCCTGAAACTTGGACGGAGAGCCATTAAAATGCAAACCACTGGCGCCTGCACGGTAAACAAAGTCAGATCCCTTCAAAGTCACCCGCCGTTCCGTTTCA]
[-] EMBL CD078655 [TCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTCATCAACGAGAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAACCAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATTAGAACTAGCAACGAGATTAGGATTTTCTTTAGTACTAGACTTGATTTCTCCACGACTGGTGTCCGGCTAAAGTAGTCGATCGATTTAATTAACGTCACATACTTCTACTTCTGAAATCTCCGCGATAAGATCTTCTTGCAACCACGACAGCTTACTTTCCACAGGCACATTCAAGTCTCCAGAAACTGTATCGAAGAGGTTACGGTTGTCGGTAATAAACTTAAGCATTCTGTCTTTTATTCCACCGGCAACAGCGGGACTCACTGAAGACGAAAATCGAGGTAGTAATCTCAAAATTGATGACGCTAGCCTGAAACTTGGACGGAGAGCCATTAAAATGCAAACCACTGGCGCCTGCACGGTAAACAAAGTCAGATCCCTTCAAAGTCACCCGCCGTTCCGTTTCA]
[-] EMBL CD200250 [ ggTTCTACTTCTGAAATCTCCGCGATAAGATCTTCTTGCAACCACGACAGCTTACTTTCCACAGGCACATTCAAGTCTCCAGAAACTGTATCGAAGAGGTTACGGTTGTCGGTAATAAACTTAAGCATTCTGTCTTTTATTCCACCGGCAACAGCGGGACTCACTGAAGACGAAAATCGAGGTAGTAACCTCAAAATTGATGACGCTAGCCTGAAACTTGGACGGAGAGCCATTAAAATGCAAACCACTGGCGCCTGCACGGTAAACAAAGTC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11219#0 TACGCAGTACGGTAATGCAGTTGCATGGCATGTTTATTTTTTTTTTTTTTTTTTTTTTAC 60
consensus_11219#1 ------------------------------------------------------------
consensus_11219#2 ------------------------------------------------------------
consensus_11219#0 ACAGTAAAGAACAATTTTAATATTTACTGATTTCAATAACAAGACTATTTGACACTGTTG 120
consensus_11219#1 ----TAAAGACCAATTT-AATATTT-CTGATTTCA-TAACAAGACTATTTGACACTGT-G 52
consensus_11219#2 ------------------------------------------------------------
consensus_11219#0 GCTAATGCTAAACCGACCAAAAGTTATCTACTCTGAAATACAGAAAACCTATTTGTTTTA 180
consensus_11219#1 GNTAATGCTAAAC-GACCAAAAGT-ATCTA-TCTGAA----------------------- 86
consensus_11219#2 ------------------------------------------------------------
consensus_11219#0 GTCCAGCAGCATGTTTTTGCGTATGTTAGCATACACTTCTTTCATTTCCTTCCATTTTAA 240
consensus_11219#1 -----------------TGCGTATGTAGGCATACACTTCTTTCATTTCCTTCCATNTTAN 129
consensus_11219#2 ------------------------------------------------------------
consensus_11219#0 AGCCATATTGTCCATCATTTCATCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTC 300
consensus_11219#1 AGCCATATGTCNCATCATNTCATCCGCACCCGGGGACTTCGGTGTCATAGATTTTCCTTC 189
consensus_11219#2 ------------------------------------------------------------
consensus_11219#0 TGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATT 360
consensus_11219#1 TGCTAAAAGGATGTTTAATTCTTTCTCCAAGATATCAAATCGTTTAAGCAGATCAGCATT 249
consensus_11219#2 ------------------------------------------------------------
consensus_11219#0 TTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTC 420
consensus_11219#1 NTCTGGTTTATCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTC 309
consensus_11219#2 ----------TCTTTAATTTTATTCCACTTTTTCTCTCGCTCCTCCTCATAGCGCTGCTC 50
**************************************************
consensus_11219#0 ATCAACGAGAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAAC 480
consensus_11219#1 ATCAACGAGAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAAC 369
consensus_11219#2 ATCAACGAGAAGGAACCAGTGACCACAAAAGCAACGTGCAGGAAGATTACGATACAAAAC 110
************************************************************
consensus_11219#0 CAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATT 540
consensus_11219#1 CAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTNNNNNN 429
consensus_11219#2 CAAAGATTTTAGATGATGGTCGTGAGGACTACAGTGACATTGTTGAACAGCTCTGACATT 170
******************************************************
consensus_11219#0 AGAACTAGCAACGAGATTAGGATTTTCTTTAGTACTAGACTTGATTTCTCCACGACTGGT 600
consensus_11219#1 NNNNNNNNNNNCGAGATTAGGATTTTCTTTAGTACTAGACTTGATTTCTCCACGACTGGT 489
consensus_11219#2 AGAACTAGCAACGAGATTAGGATTTTCTTTAGTACTAGACTTGATTTCTCCACGACTGGT 230
*************************************************
consensus_11219#0 GTCCGG------------------------------------TTCTACTTCTGAAATCTC 624
consensus_11219#1 GTCCGG------------------------------------TTCTACTTCTGAAATCTC 513
consensus_11219#2 GTCCGGCTAAAGTAGTCGATCGATTTAATTAACGTCACATACTTCTACTTCTGAAATCTC 290
****** ******************
consensus_11219#0 CGCGATAAGATCTTCTTGCAACCACGACAGCTTACTTTCCACAGGCACATTCAAGTCTCC 684
consensus_11219#1 CGCGATAAGATGTTCTTGCAACCACGACAGCTTACTTTCCACAGGCACATTCAAGTCTCC 573
consensus_11219#2 CGCGATAAGATCTTCTTGCAACCACGACAGCTTACTTTCCACAGGCACATTCAAGTCTCC 350
*********** ************************************************
consensus_11219#0 AGAAACTGTATCGAAGAGGTTACGGTTGTCGGTAATAAACTTAAGCATTCTGTCTTTTAT 744
consensus_11219#1 AGAA----------------------TGTCGGTAATAAACTTAAGCATTCTGTCTTTTAT 611
consensus_11219#2 AGAAACTGTATCGAAGAGGTTACGGTTGTCGGTAATAAACTTAAGCATTCTGTCTTTTAT 410
**** **********************************
consensus_11219#0 TCCACCGGCAACAGCGGGACTCACTGAAGACGAAAATCGAGGTAGTAATCTCAAAATTGA 804
consensus_11219#1 TCCACCGGCAACAGCGGGACTCACTGAAGACGAAAATCGAGGTAGTAATCTCAAAATTGA 671
consensus_11219#2 TCCACCGGCAACAGCGGGACTCACTGAAGACGAAAATCGAGGTAGTAATCTCAAAATTGA 470
************************************************************
consensus_11219#0 TGACGCTAGCCTGAAACTTGGACGGAGAGCCATTAAAATGCAAACCACTGGCGCCTGCAC 864
consensus_11219#1 TGACGCTAGCCTGAAACTTGGACGGAGAGCCATTAAAATGCAAACCACTGGCGCCTGCAC 731
consensus_11219#2 TGACGCTAGCCTGAAACTTGGACGGAGAGCCATTAAAATGCAAACCACTGGCGCCTGCAC 530
************************************************************
consensus_11219#0 GGTAAACAA-GTCAGATCCC--------------------------- 883
consensus_11219#1 GGTAAACAAAGTCAGATCCCTTCAAAGTCACCCGCCGTTCCG----- 773
consensus_11219#2 GGTAAACAAAGTCAGATCCCTTCAAAGTCACCCGCCGTTCCGTTTCA 577
********* **********
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||