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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11237#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 32 consensus length = 2044 fasta sequence
[TTTTTTTTTTTTTTTTTTTTGATCATTTTAAAAATGTATTACAATCTTTGGATCACTAATACTTTTTAACTGTAAGCTTGGCATGCCAAAATTCAAACATAAGATTGTTGTTAAGAGAAAGCTAGTCACACATTTTCCACGTCGCACGAAACAATATGGTACCAAATTATACA-TGCGATT-GGTCACTGAACCAAAGAAATGCAATATCAACAAACAAAGACCATAGGCTACAGCCATCAGCTATAGATAAAGTTAAGCAATAAACCGGGCTTGATCAATACGACAATTAGTAAGTAGGCTGAGCAAATGCAGTAGTCATTCCTCGATGAGCGCCACCACGACCTGGATGGGCACCGAAATTCCCACCACC-GCCCCGCTGACCTGTATTGCGTCTTGGACCACCACTTCCACGGCCTCGATTTTCATTTGGAATACGGCCACGTAAACCAACTTTGGGATTTCCATGCTGGAAATTTGAATCAGGTTGTTCGGACTCACGAGAGTTTTCATCCATCGTGCGGTCAGTCTTTTTAGAGTTTATATTATCTACGACTGCTGGTCGATTAAAACCTGTATGTACTTGTCCGGCTCTTCGAACAGAATCCGCATATGAAATTGGTTTGTGTACATTGATATTTGTCTCATGCTCATCCTGAGATAATATTGATTTAAAAGATGTAGTTTGATTGACATTGTCCGGTGACAAAGATGATGAACTTCTTCCGAATAATTCAATCTTTGAGTGTTCAACTTCTGGAATATTTAAAACA-TATTGT-TGGTCTATCCTTGTAACCAAAGAACGGTCAATGTTATCTTCAATACTATGATTACTGAAA-CAAGAAACACTCGTTTTATTAGGTAATTGATTAACAGGCATAACGTCTTCATAGTTTGTTGGAGGTTCGGCCGTGATATGCGAATGGTCGACTCTAGAAGCCTGGATAAAGTTGAACGTACTATTGAGTGGTCGGATGACTTGATCCACCGGTTCATCTGAAGTTGTAACAG-AAGAGTGCCCACCAATTGTTGTGAATTCATTATAGGGAACAGTAGGCACATCAGTGGGA-CCTGATAGGCCGGTAGGTGAGTTAGTTTCCGAATCTGCAACAACTTGTGTTGGTTCTGGTACAACCGTTGTGCTGCTATCACTAATAAGACCCATCGATTGCTGGACGAGTGGGTTAGACAGTAGTCGGAAGCACAAATTGCGAATGTCCTTGTAAGTTGTGTGCTTCTTTCGAAAGTCCTCTAAATCGTTTGACAGTGGGACAGGTACTGAATTCCCATTCATCAAATTGAAGGTGCTTGTAGCAACAGTCTTAAGATCTTCTCGTGCACGTAAGAAATTGGGAACAGAAGATAGAGCTGAAGAACTAACTCCAGGCCAATTATCCACTACGGG-CGGTGTTAATATATCTCGTACGGCGTCTAACAACTTAAGGTTGTTTTCTGATGAAGATTTTGTGACGGCTGAACGGACTGTCGGAATGTCCAAAGAAGCAAAAAAACGTTCCAAACACATGTGGATACTTAAATACGAAAGAGTATATTTCTCATGTTCAGCTTCCAGTTGGGACATTTGCTTACCAACGACTGACTCCATATTCGACAAGAGATCCTTCGTCTGTGCCACAATCTC-TTGTACAAACGAGATGTTCTGAACCACACCATCATAGCTTTCGACGGCTTTCTTTTGTTCATCTTTCAGGACTTCACCTTTCTGCAGTTTTTCGCGATAACCATCTAGCTTACT---CTTTCTTTTTCCAAGATTCCTTTGTCTTCGCTCAAGATTCGACAAGAACTGTCTAACTAAC-TCACATGGAGAATCACACTCAAGCATGCCTTTAACGCCGGTCACAAAACAGTTCAAAAATTCCAATAGTCCGTTCAGCCGTCACAAAATCTTCATCAGAAAACAACCTTAAGTTGTTAGACGCCGTACGAGATATATTAACACCGCCCGTAGTGGATAATTGGCCTGGAGTTAGTTCTTCAGCTCTATCTTCTGTTCCCAATTTCTTACGTGCACGAGAAGATCTTAAGA]
[+] EMBL AI395418 [TTTTTTTTTTTTTTTTTTTTGATCATTTTAAAAATGTATTACAATCTTTGGATCACTAATACTTTTTAACTGTAAGCTTGGCATGCCAAAATTCAAACATAAGATTGTTGTTAAGAGAAAGCTAGTCACACATTTTCCACGTCGCACGAAACAATATGGTACCAAATTATACATTGCGATT GGTCACTGAACCAAAGAAATGCAATATCAACAAACAAAGACCATAGGCTACAGCCATCAGCTATAGATAAAGTTAAGCAATAAACCGGGCTTGATCAATACGACAATTAGTAAGTAGGCTGAGCAAATGCAGTAGTCATTCCTCGATGAGCGCCACCACGACCTGGATGGGCACCGAAATTCCCACCACCGGCCCCGCTGACCTGTATTGCGTCTTGGGCCACCACTTCCAC ]
[+] EMBL SMT14488 [ AAAAATGTATTACAATCTTTGGNTCACTAATACTTTTTAACTGTAAACTTGGCATGCCAAAATTCAAACATAAGATTGTNGTTAAGAGAAAGCTAGTCACACATTTNCCACGTNGCACGAAACAATATGGTACCAAATTATACATTGCGATT GGTCACTGAACCAAAGAAATGCAATATCAACAAACAAAGACCATAGGNTACAGCCATCAGCTATAGATAAAGTTAAGCAATAAACCGGGCTTGATCAATACGACAATTAGTAAGTNGGCTGAGCAAATGCAGTAGTCATTCCTCGATGAGCGCCACCACGACCTGGATGGGCACCGAANTTCCCA ]
[+] EMBL SMT14634 [ AAATTCAAACATAAGATTGTTGTTAAGAGAAAGCTAGTCACACATTTTCCACGTCGCACGAAACAATATGGTACCAAATTATACATTGCGATT GGTCACTGAACCAAAGAAATGCAATATCAACAAACAAAGACCATAGGCCACAGCCATCAGCTATAGATAAAGTTAAGCAATAAACCG ]
[-] EMBL CD137577 [ CAAACATAAGATTGTTGTTAAGAGAAAGCTAGTCACACATTTTCCACGTCGCACGAAACAATATGGTACCAAATTATACATTGCGATT GGTCACTGAACCCAAGAAATGCAATATCAACAAACAAAGACCATAGGCTACAGCCATCAGCTATAGATAAAGTTAAGCAATAAACCGGGCTTGATCAATACGACAATTAGTAAGTAGGCTGAGCAAATGCAGTAGTCATTCCTCGATGAGCGCCACCACGACCTGGATGGGCACCGAAATTCCCACCACC GCCCCGCTGACCTGTATTGCGTCTTGGACCACCACTTCCACGGCCTCGATTTTCATTTGGAATACGGCCACGTAAACCAACTTTGGGATTTCCATGCTGGAAATTTGAATCAGGTTGTTCGGACTCACGAGAGTTTTCATCCATCGTGCGGTCAGTCTTTTTAGAGTTTATATTATCTACGACTGCTGGTCGATTAAAACCT ]
[-] EMBL CD145395 [ AGCTAGTCACACATTTTCCACGTCGCACGAACCAATATGGTACCAAATTATACA TGCGATTGGGTCACTGACCCAAAGAAATGCAATATCAACAAACAAGNACCATAGGCTACAGCCATCAGCTATAGATAAAGTTAAGCAATAAACCGGGCTTGATCAATACGACAATTAGTAAGTAGGCTGAGCAAATGCAGTAGTCATTCCTCGATGAGCGCCACCACGACCTGGATGGGCACCGAAATTCCCACCACC GCCCCGCTGACCTGTATTGCGTCTTGGACCACCACTTCCACGGCCTCGATTTTCATTTGGAATACGGCCACGTAAACCAACTTTGGGATTTCCATGCTGGAAATTTGAATCAGGTTGTTCGGACTCACGAGAGTTTTCATCCATCGTGCGGTCAGTCTTTTTAGAGTTTATATTATCTACGACTGCTGGTCGATTAAAACCTGTATGTACTTGTCCGGCTCTTCGAACAGAATCCGCATATGAAATTGGTTTGTGTACATTGATATTTGTCTCATGCTCATCCTGAGATAATATTGATTTAAAAGATGTAGTTTGATTGACATTGTCCGGTGACAAAGATGATGAACTTCTTCCGAATAATTCAATCTTTGAGTGTTCAACTTCTGGAATATTTAAAACA T ]
[+] EMBL CD064272 [ acCGTCGCA GAAACAATATGGTACCAAATTAT CATTGCGA T GGTCACTGAACCAAAGAAATGCAATATCAACAAACAAAGACCATAGGCTACAGCCATCAGCTATAGATAAAGTTGAGCAATAAACCGGGCTTGATCAATACGACAATTAGTAAGTAGGCTGAGCAAATGCAGTAGTCATTCCTCGATGAGCGCCACCACGACCTGGATGGGCACCGAAATTCCCACCACC GC ]
[-] EMBL CD096619 [ TGGTACCAAATTATACATTGCGATT GGTCACTGAACCAAAGAAATGCAATATCAACAAACAAAGACCATAGGCTACAGCCATCAGCTATAGATAAAGTTAAGCAATAAACCGGGCTTGATCAATACGACAATTAGTAAGTAGGCTGAGCAAATGCAGTAGTCATTCCTCGAT ]
[-] EMBL CD170973 [ GAAATGCAATATCAACAAACAAAGACCATAGGCTACAGCCATCAGCTATAGATAAAGTTAAGCAATAAACCGGGCTTGATCAATACGACAATTAGTAAGTAGGCTGAGCAAATGCAGTAGTCATTCCTCGATGAGCGCCACCACGACCTGGATGGGCATCGAAATTCCCACCACC ]
[+] EMBL CD163925 [ GTCTTGGACCACCACTTCCACGGCCTCGATTTTCATTTGGAATACGGCCACGTAAACCAACTTTGGGATTTCCATGCTGGAAATTTGAATCAGGTTGTTCGGACTCACGAGAGTTTTCATCCATCGTGCGGTCAGTCTTTTTAGAGTTTATATTATCTACGACTGCTGGTCGATTAAAACCTGTATGTACTTGTCCGGCTCTTCGAACAGAATCCGCATATGAAATTGGTTTGTGTACATTGATATTTGTCTCATGCTCATCCTGAGATAATATTGATTTAAAAGATGTAGTTTGATTGACATTGTCCGGTGACAAAGATGATGAACTTCTTCCGAATAATTCAATCTTTGAGTGTTCAACTTCTGGAATATTTAAAACA TATTGT TGGTCTATCCTTGTAACCAAAGAACGGTCAATGTTATCTTCAATACTATGATTACTGAAA CACCAAACACT ]
[+] EMBL CD164014 [ GTCTTGGACCACCACTTCCACGGCCTCGATTTTCATTTGGAATACGGCCACGTAAACCAACTTTGGGATTTCCATGCTGGAAATTTGAATCAGGTTGTTCGGACTCACGAGAGTTTTCATCCATCGTGCGGTCAGTCTTTTTAGAGTTTATATTATCTACGACTGCTGGTCGATTAAAACCTGTATGTACTTGTCCGGCTCTTCGAACAGAATCCGCATATGAAATTGGTTTGTGTACATTGATATTTGTCGCATGCTCATCCTGAGATAATATTGATTTAAAAGATGTAGTTTGATTGACATTGTCCGGTGACAAAGATGATGAACTTCTTCCGAATAATTCAATCTTTGAGTGTTCAACTTCTGGAATATTTAAAACA TATTGT TGGTCTATCCTTGTGACCAAAGAACGGTCAATGTTATCTTCAATACTATGACTACTGAAA CAAGACACACTCGTTTTATTATGTAATTGATTAACAGGCt ]
[-] EMBL CD163825 [ TTCA TTGGAATACGGCCACGTAAACCAAC TTGGGATTTCCATGCTGGAAATNTGAATCAGGTTGTTCGGACTCACGAGAGTTTTCATCCATCGTGCGGTCAGTCTTTTTAGAGTTTATATTATCTACGACTGCTGGTCGATTAAAACCTGTATGTACTTGTCCGGCTCTTCGAACAGAATCCGCATATGAAATTGGTTTGTGTACATTGATATTTGTCTCATGCTCATCCTGAGATAATATTGATTTAAAAGATGTAGTTTGATTGACATTGTCCGGTGACAAAGATGATGAACTTCTTCCGAATAATTCAATCTTTGAGTGTTCAACTTCTGGAATATTTAAAACA TATTGT TGGTCTATCCTTGTAACCAAAGAACGGTCAATGTTATCTTCAATACTATGATTACTGAAA CAAGAAACACTCGTTCTATTAGGTAATTGATTAACAGGCATAACGTCCTCATAGTTTGTTGGAGGTTCGGCCGTGATATGCGAATGGTCGACTCTAGAAGCCTGGATAAAGTTGAACGTACTATTGAGTGGTCGGATGACTTGATCCAC ]
[+] EMBL BG930822 [ gTCTTCGAACAGAATCCGCATATGAAATTGGTTTGTGTACATTGATATTTGTCTCATGCTCATCCTGAGATAATATTGATTTAAAAGATGTAGTTTGATTGACATTGTCCGGTGACAAAGATGATGAACTTCTTCCGAATAATTCAATCTTTGAGTGTTCAACTTCTGGAATATTTAAAACA TATTGT TGGTCTATCCTTGTAACCAAAGAACGGTCAATGTTATCTTCAATACTATGATTACTGAAA CAAGAAACACTCGTTTTATTAGGTAATTGATTAACAGGCATAACGTCTTCATAGTTTGTTGGAGGTTCGGCCGTGATATGCGAATGGTCGACTCTAGAAGCCTGGATAAAGTTGAACGTACTATTGAGTGGTCGG ]
[+] EMBL CD190067 [ GATTTAAAAGGTGTAGTTTGATTGACTTTGCCCGGAGACAAAGATGATGAACTTCTTCCAAATAATTCAATCTTTGAGTGTTCAACTTCTGGAATATTTAAAACAGTGTGGTGGGGCCTATCCTTGTAACCAAAGAACGGTCAATGTTATCTTCAATACTATGATTACTGAAA CAAGAAACACTCGTTTTATTAGGTAATTGATTAACAGGCATAACGTCTTCATAGTTTGTTGGAGGTTCGGCCGTGATATGCGAATGGTCGACTCTAGAAGCCTGGATAAAGTTGAACGTACTATTGAGTGGTCGGATGACTTGATCCACCGGTTCATCTGAAGTTGTAACAG AAGAGTGCCCACCAATTGTTGTGAATTCATTATAGGGAACAGTAGGCACATCAGTGGGACCCTGATAGGCCGGTAGGTGAGTTAGTTT ]
[+] EMBL CD159267 [ AACGGTCAATGTTATCTTCAATACTATGATTACTGAAA CAAGAAACACTCGTTTTATTAGGTAATTGATTAACAGGCATAACGTCTTCATAGTTTGTTGGAGGTTCGGCCGTGATATGCGAATGGTCGACTCTAGAAGCCTGGATAAAGTTGAACGTACTATTGAGTGGTCGGATGACTTGATCCACCGGTTCATCTGAAGTTGTAACAG AAGAGTGCCCACCAATTGTTGTGAATTCATTATAGGGAACAGTAGGCACATCAGTGGGA CCTGATAGGCCGGTAGGTGAGTTAGTTTCCGAATCTGCAACAACTTGTGTTGGTTCTGGTACAACCGTTGTGCTGCTATCACTAATAAGACCCATCGATTGCTGGACGAGTGGGTTAGACAGTAGTCGGAAGCACAAATTGCGAATGTCCTTGTAAGTTGTGTGCTTCTTTCG AAGTCCTCTAAATCGTTTGACAGTGGGACAGGTACTGAATTCCCATTCATCAAATTGAAGGTGCTTGTAGCAACAGTCTTAAGATCTTCTCGTGCACGTAAGAAATTGGGAACAGAAGATAGAGCTGAAGAACTAACTCCAGGCCAATTATCCACTACGGGNCGGTGTT ATATA ]
[-] EMBL BF936829 [ CAATACTATGA TACTGAAACCAAGAAACACTCG TTTATTAGGTAATTGATTAACAGGCATAACGTCTTCATAGTTTGTTGGAGGTTCGGCCGTGATATGCGAATGGTCGACTCTAGAAGCTGGGATAAAGTTGAACGTACTATTGAGTGGTCGGATGACTTGATCCACCGGTTCATCTGAAGTTGTAACAGAAAGAGTGCCCACCAATTGTTGTGAATTCATTATAGGGAACAGTAGGCACATCAGTGGGA CCTGATAGGCCGGTAGGTGAGTTAGTTTCCGAATCTGCAACAACTTGTGTTGGTTCTGGTACAACCGTTGTGCTGCTATCACTAATAAGACCCATCGATTGCTGGACGAGTGGGTTAGACAGTAGTCGGAAGCACAAATTGCGAATGTCCTTGTAAGTTGTGTGCTTCTTTCGAAAGTCCTCTAAATCGTTTGACAGTGGGACAGGTACTGAATTCCCATTCATCAAATTGAAGGTGCTTGTAGCAACAGTCTTAAGATCTTCTCGTGCACGTAAGAAATTGGGAACAGAAGATAGAGCTGAAGAACTAACTCCAGGCCAATTAT ]
[+] EMBL CD117156 [ ACAGGCATAACGTCTTCATAGTTTGTTGGAGGTTCGGCCGTGATATGCGAATGGTCGACTCTAGAAGCCTGGATAAAGTTGAACGTACTATTGAGTGGTCGGATGACTTGATCCACCGGTTCATCTGAAGTTGTAACAG AAGAGTGCCCACCAATTGTTGTGAATTCATTATAGGGAACAGTAGGCACATCAGTGGGA CCTGATAGGCCGGTAGGTGAGTTAGTTTCCGAATCTGCAACAA ]
[+] EMBL CD117254 [ ACAGGCATAACGTCTTCATAGTTTGTTGGAGGTTCGGCCGTGATATGCGAATGGTCGACTCTAGAAGCCTGGATAAAGTTGAACGTACTATTGAGTGGTCGGATGACTTGATCCACCGGTTCATCTGAAGTTGTAACAG AAGAGTGCCCACCAATTGTTGTGAATTCATTATAGGGAACAGTAGGCACATCAGTGGGA CCTGATAGGCCGGTAGGTGAGTTAGTTTCCGAATCTGCAACAA ]
[+] EMBL CD117157 [ ACAGGCATAACGTCTTCATAGTTTGTTGGAGGTTCGGCCGTGATATGCGAATGGTCGACTCTAGAAGCCTGGATAAAGTTGAACGTACTATTGAGTGGTCGGATGACTTGATCCACCGGTTCATCTGAAGTTGTAACAG AAGAGTGCCCACCAATTGTTGTGAATTCATTATAGGGAACAGTAGGCACATCAGTGGGA CCTGATAGGCCGGTAGGTGAGTTAGTTTCCGAATCTGCAACAA ]
[+] EMBL CD120844 [ GAGGTTCGGCCGTGATATGCGAATGGTCGACTCTAGAAGCCTGGATAAAGTTGAACGTACTATTGAGTGGTCGGATGACTTGATCCACCGGTTCATCTGAAGTTGTAACAG AAGAGTGCCCACCAATTGTTGTGAATTCATTATAGGGAACAGTAGGCACATCAGTGGGA CCTGATAGGCCGGTAGGTGAGTTAGTTTCCGAATCTGCAACAACTTGTGTTGGTTCTGGTACAACCGTTGTGCTGCTATCACTAATAAGACCCATCGATTGCTGGACGAGTGGGTTAGACAGTAGTCGGAAGCACAAATTGCGAATGTCCTTGCAAGTTGTGTGCTTCTTTCGAAAGTCCTCTAAATCGTTTGACAGTGGGACAGGTACTGAATTCCCATTCATCAAATTGAAGGT ]
[+] EMBL CD094729 [ TGAGTTAGTTTCCGAATCTGCAACAACTTGTGTTGGTTCTGGTACAACCGTTGTGCTGCTATCACTGATAAGACCCATCGATTGCTGGACGAGTGGGTTAGACAGTAGTCGGAAGCACAAATTGCGAATGTCCTTGTAAGTTGTGTGCTTCTTTCGAAAGTCCTCTAAATCGTTTGACAGTGGGACAGGTACTGAATTCCCATTCATCAAATTGAAGGTGCTTGTAGCAACAGTCTTAAGATCTTCTCGTGCACGTAAGAAATTGGGAACAGAAGATAGAGCTGAAGAACTAACTCCAGGCCAATTATCCACTACGGG CGGCGTTAATATATCTCGTACGGCGTCTAACAACTTAAGGTTGTTTTCTGATGAAGATTTTGTGACGGCTGAACGGACTGTCGGAATGTCCAAAGAAGCAAAAAAACGTTCCAAACACATGTGGATACTTAAATACGAAAGAGTATATTTCTCATGTTCAGCTTCCAGTTGGGACATTTGCTTACCAACGACTGACTCCATATTCGACAAGAGATCCTTCG ]
[+] EMBL CD200897 [ GAATCTGCAACAACTTGTGTTGGTTCTGGTACAACCGTTGTGCTGCTATCACTAATAAGACCCATCGATTGCTGGACGAGTGGGTTAAACAGTAGTCGGAAGCACAAATTGCGAATGTCCTTGTAAGTTGTGTGCTTCTTTCGAAAGTCCTCTAAATCGTTTGACAGTGGGACAGGTACTGAATTCCCATTCATCAAATTGAAGGTGCTTGTAGCAACAGTCTTAAGATCTTCTCGTGCACGTAAGAAATTGGGAACAGAAGATAGAGCTGAAGAACTAACTCCAGGCCAATTATCCACTACGGG CGGTGTTAATATATCTCGCACGGCGTCTAACAACTTAAGGTTGTTTTCTGATGAAGATTTTGTGACGGCTGAACGGACTGTCGGAATGTCCAAAGAAGCAAAAAAACGTTCCAAg ]
[-] EMBL CD163004 [ GCTTCTTTCGANAGTCCTCTAAATCGTTTGACAGTGGGACAGGTACTGAATTCCCATTCATCAAATTGAAGGTGCTTGTAGCAACAGTCTTAAGATCTTCTCGTGCACGTAAGAAATTGGGAACAGAAGATAGAGCTGAAGAACTAACTCCAGGCCAATTATCCACTACGGG CGGCGTTAATATATCTCGTACGGCGTCTAACAACTTAAGGTTGTTTTCTGATGAAGATTTTGTGACGGCTGAACGGACTGTCGGAATGTCCAAAGAAGCAAAAAAACGTTCCAAACACATGTGGATACTTAAATACGAAAGAGTATATTTCTCATGTTCAGCTTCCAGTTGGGACATTTGCTTACCAACGACTGACTCCATATTCGACAAGAGATCCTTCGTCTGTGCCACAATCTC TTGTACAAACGAGATGTTCTGAACCACACCATCATAGCTTTCGACGGCTTTCTTTTGTTCATCTTTCAGGACTTCACCTTTCTGCAGTTTTTCGCGATAACCATCTAGCTTACT CTTTCTTTTTCCAAGATTCCTTTGTCTTCGCTCAAGATCCGACAAGAACTGTCTAACTAAC TCACATGGA ]
[+] EMBL CD155155 [ GTTAATATATCTCGTACGGCGTCTAACAACTTAAGGTTGTTTTCTGACGAAGATTTTGTGACGGCTGAACGGACTGTCGGAATGTCCAAAGAAGCAAAAAAACGTTCCAAACACATGTGGATACTTAAATACGAAAGAGTATATTTCTCATGTTCAGCTTCCAGTTGGGACATTTGCTTACCAAC ]
[-] EMBL CD170737 [ GTTAATATATCTCGTACGGCGTCTAACAACTTAAGCTTGTTTTCTGATGAAGATTTTGTGACGGCTGAACGGACTGTCGGAATGTCCAAAGAAGCAAAAAAACGTTCCAAACACATGTGGATACTTAAATACGAAAGAGTATATTTCTCATGTTCAGCTTCCAGTTGGGACATTTGCTTACCAACGACTGACTCCATATTCGACAAGAGATCCTTCGTCTGTGCCACAATCTC TTGTACAAACGAGATGTTCTGAACCACACCATCATAGCTTTCGACGGCTTTCTTTTGTTCATCTTTCAGGACTTCACCTTTCTGCAGTTTTTCGCGATAACCATCTAGCTTACT CTTTCTTTTTCCAAGATTCCTTTGTCTTCGCTCAAGATTCGACAAGAACTGTCTAACCAACATCACATGGAG ]
[-] EMBL CD095033 [ ACTTAAGGTTGTTTTCTGATGAAGATTTTGTGACGGCTGAACGGACTGTCGGAATGTCCAAAGAAGCAAAAAAACGTTCCAAACACATGTGGATACTTAAATACGAAAGAGTATATTTCTCATGTTCAGCTTCCAGTTGGGACATTTGCTTACCAACGACTGACTCCATATTCGACAAGAGATCCTTCGTCTGTGCCACAATCTC TTGTACAAACGAGATGTTCTGAACCACACCATCATAGCTTTCGACGGCTTTCTTTTGTTCATCTTTCAGGACTTCACCTTTCTGCAGTTTTTCGCGATAACCATCTAGCTTACTCTACTTTCTTTTTCCAAGATTCCTTTGTCTTCGCTCAAGATTCGACAAGAACTGTCTAACTAAC TCACATGGAGAATCACACTCAAGCA ]
[+] EMBL CD123187 [ GAAGATTTTGTGACGGCTGAACGGACTGTCGGAATGTCCAAAGAAGCAAAAAAACGTTCCAAACACATGTGGATGCTTAAATACGAAAGAGTATATTTCTCATGTTCAGCTTCCAGTTGGGACATTTGCTTACCAACGACTGACTCCATATTCGGCAAGAGATCCTTCGTCTGTGCCACAATCTC TTGTACAAACGAGATGTTCTGAACCACACCATCATAGCTTTCGACGGCTTTCTTTTGTTCATCTTTCAGGACTTCACCTTTCTGCAGTTTTTCGCGATAACCATCTAGCTTACT CTTTCTTTTTCCAAGATTCCTTTGTCTTCGCTCAAGATTCCACAAGAACTGTCTAACCAAC TCACATGGAGAATCACACTCAAGCATGCCTTTAACGCCGGTCACAAAACAGTTCAAAAATTCC ]
[-] EMBL CD170314 [ TCGGAATGTCCAAAGAAGCAAAAAAACGTTCCAAACACATGTGGATACTTAAATACGAAAGAGTATATTTCTCATGTTCAGCTTCCAGTTGGGACATTTGCTTACCAACGACTGACTCCATATTCGACAAGAGATCCTTCGTCTGTGCCACAATCTC TTGTACAAACGAGATGTTCTGAACCACACCATCATAGCTTTCGACGGCTTTCTTTTGTTCATCTTTCAGGACTTCACCTTTCTGCAGTTTTTCGCGATAACCATCTAGCTTACT CTTTCTTTTTCCAAGATTCCTTTGTCTTCGCTCAAGATTCGACAAGAACTGTCTAACTAAC TCACATGGAGAATCA ]
[-] EMBL CD158722 [ TCGGAATGTCCAAAGAAGC AAAAAACGTTCCAAACACATGTGGATACTTAAATACGAAAGAGTATATTTCTCATGTTCAGCTTCCAGTTGGGACATTTGCTTACCAACGACTGACTCCATA ]
[-] EMBL SMT14489 [ CATGTGGATACTTAAATACGAAAGAGTATATTTCTCATGTTCAGCTTCCAGTTGGGACATTTGCTTACCAACGACTGACTCCATATTCGACAAGAGATCCTTCGTCTGTGCCACAATCTC TTGTACAAACGAGATGTTCTGAACCACACCATCATAGCTTTCGACGGCTTTCTTTTGTTCATCTTTCAGGACTTCACCTTTCTGCAGTTTTTCGCGATAACCATCTAGCTTACT CTTTCTTTTTCCAAGATTCCTTTGTCTTCGCTCAAGATTCGACAAGAACTGTCTAACCAAC TCACATGGAGA ]
[-] EMBL SMT14486 [ GACTGACTCCATATTCGACAAGAGATCCTTCGTCTGTGCCACAATCTCTTTGTACAAACGAGATGTTCTGAACCACACCATCATAGCTTTCGACGGCTTTCTTTTGTTCATCTTTCAGGACTTCACCTTTCTGCAGTTTTTCGCGATAACCATCTAGCTTACT CTTTCTTTTTCCAAGATTCCTTTGTCTTCGCTCAAGATTCGACAAGAACTGTCTAACTAAC TCACATGGAGAATCACACTCAAGCATGCCTTTAACGCC ]
[-] EMBL CD159168 [ ACTCCATATTCGACAAGAGATCCTTCGTCTGTGCCACAATCTC TTGTACAAACGAGATGTTCTGAACCACACCATCATAGCTTTCGACGGCTTTCTTTTGTTCATCTTTCAGGACTTCACCTTTCTGCAGTTTTTCGCGATAACCATCTAGCTTACT CTTTCTTTTTCCAAGATTCCTTTGTCTTCGCTCAAGATTCGACAAGAACTGTCTAACTAAC TCACATGGAG ]
[-] EMBL CD159079 [ ACTCCATATTCGACAAGAGATCCTTCGTCTGTGCCACAATCTC TTGTACAAACGAGATGTTCTGAACCACACCATCATAGCTTTCGACGGCTTTCTTTTGTTCATCTTTCAGGACTTCACCTTTCTGCAGTTTTTCGCGATAACCATCTAGCTTACT CTTTCTTTTTCCAAGATTCCTTTGTCTTCGCTCAAGATTCGACAAGAACTGTCTAACCAAC TCACATGGAGAATCACACTCAAGCATGCCTTTAACGCCGGTCAC AAACAGTACAAAAATTCCAATAGTCCGTTCAGCCGTCACAAAATCTTCATCAGAAAACAACCTTAAGTTGTTAGACGCCGTACGAGATATATTAACACCGCCCGTAGTGGATAATTGGCCTGGAGTTAGTTCTTCAGCTCTATCTTCTGTTCCCAATTTCTTACGTGCACGAGAAGATCTTAAGA]
consensusID : consensus_11237#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 491 fasta sequence
[AATGGTCGACTCTAGAAGCCTGGATAAAGTTGAACGTACTATTGAGTGGTCGGATGACTTGATCCACCGGTTCATCTGAAGTTGTAACAGAAGAGTGCCCACCAATTGTTGTGAATTCATTATAGGGAACAGTAGGCACATCAGTGGGACCTGATAGGCCGGTAGGTGAGTTAGTTTCCGAATCTGCAACA-ACTTGTGTTGGTTCTGGTACAACCGTTGTGCTGCTATCACTAATAAGACCCATCGATTGCTGGACGAGTGGGTTAGACAGTAGTCGGAAGCACAAATTGCGAATGTCCTTGTAAGTTGTGTGCTTCTTTCGAAAGTCCTCTAAATCGTTTGACAGTGGGACAGGT-ACTGAATTCCCATTCATCAAATTGAAGGTGCTTGTAGCAACAGTCTTAAGATCTTCTCGTGCACGTAAGAAATTGGGAACAGAAGATAGAGCTGAAGAACTCCTCGTGCCGATTCTGGCCTCGAGGCCAATTCCC]
[-] EMBL CD083858 [AATGGTCGACTCTAGAAGCCTGGATAAAGTTGAACGTACTATTGAGTGGTCGGATGACTTGATCCACCGGTTCATCTGAAGTTGTAACAGAAGAGTGCCCACCAATTGTTGTGAATTCATTATAGGGAACAGTAGGCACATCAGTGGGACCTGATAGGCCGGTAGGTGAGTTAGTTTCCGAATCTGCAACA ACTTGTGTTGGTTCTGGTACAACCGTTGTGCTGCTATCACTAATAAGACCCATCGATTGCTGGACGAGTGGGTTAGACAGTAGTCGGAAGCACAAATTGCGAATGTCCTTGTAAGTTGTGTGCTTCTTTCGAAAGTCCTCTAAATCGTTTGACAGTGGGACAGGT ACTGAATTCCCATTCATCAAATTGAAGGTGCTTGTAGCAACAGTCTTAAGATCTTCTCGTGCACGTAAGAAATTGGGAACAGAAGATAGAGCTGAAGAACTCCTCGTGCCGATTCTGGCCTCGAGGCCAATTCCC]
[+] EMBL CD183301 [ AACGTACTATTGAGTGGTCGGATGACTTGATCCACCGGTTCATCTGAAGTTGTAACAGAAGAGTGCCCACCAATTGTTGTGAATTCATTATAGGGAACAGTAGGCACATCAGTGGGACCTGATAGGCCGGTAGGTGAGTTAGTTTCCGAATCTGCAACA ACTTGTGTTGGTTCTGGTACAACCGTTGTGCTGCTATCACTAATAAGACCCATCGATTGCTGGACGAGTGGGTTAGACAGTAGTCGGAAGCACAAATTGCGAATGTCCTTGTAAGTTGTGTGCTTCTTTCGAAAGTCCTCTAAATCGTTTGACAGTGGGACAGGT ACTGAATTCCCATTCATCAAATTGAAGGTGCTTGTAGCAACAGTCTTAAGATCTTCTCGTGCACGTAAGAAATTGGGAACAGAAGATAGAGCTGA ]
[+] EMBL CD190128 [ AACGTACTATTGAGTGGTCGGATGACTTGATCCACCGGTTCATCTGAAGTTGTAACAGAAGAGTGCCCACCAATTGTTGTGAATTCATTATAGGGAACAGTAGGCACATCAGTGGGACCTGATAGGCCGGTAGGTGAGTTAGTTTCCGAATCTGCAACA ACTTGTGTTGGTTCTGGTACAACCGTTGTGCTGCTATCACTAATAAGACCCATCGATTGCTGGACGAGTGGGTTAGACAGTAGTCGGAAGCACAAATTGCGAATGTCCTTGTAAGTTGTGTGCTTCTTTCGAAAGTCCTCTAAATCGTTTGACAGTGGGACAGGT ACTGAATTCCCATTCATCAAATTGAAGGTGCTTGTAGCAACAGTCTTAAGATCTTCTCGTGCACGTAAGAAATTGGGAACAGAAGATAGAGCTGA ]
[+] EMBL CD190104 [ AACGTACTATTGAGTGGTCGGATGACTTGATCCACCGGTTCATCTGAAGTCGTAACAGAAGAGTGCCCACCAATTGTTGTGAATTCATTATAGGGAACAGTAGGCACATCAGTGGGACCTGATAGGCCGGTAGGTGAGTTAGTTTCCGAATCTGCAACA ACTTGTGTTGGTTCTGGTACAACCGTTGTGCTGCTATCACTAATAAGACCCATCGATTGCTGGACGAGTGGGTTAGACAGTAGTCGGAAGCACAAATTGCGAATGTCCTTGTAAGTTGTGTGCTTCTTTCGAAAGTCCTCTAAATCGTTTGACAGTGGGACAGGT ACTGAATTCCCATTCATCAAATTGAAGGTGCTTGTAGCAACAGTCTTAAGATCTTCTCGTGCACGTAAGAAATTGGGAACAGAAGATAGAGCTGA ]
[+] EMBL CD120767 [ CAGTAGGCACATCAGTGGGACCTGACAGGCCGGTAGGTGAGTTAGTTTCCGAATCTGCAACA GCTTGTGTTGGTTCTGGTACAACCGTTGTGCTGCTATCACTAATAAGACCCATCGATTGCTGGACGAGTGGGTTAGACAGTAGTCGGAAGCACAAATTGCGAATGTCCTTGTAAGTTGTGTGCTTCTTTCGAAAGTCCTCTAAATCGTTTGACAGTGGGACAGGT ACTGAATT ]
[-] EMBL CD090894 [ AGTAGGCACATCAGTGGGACCTGATAGGCCGGTAGGTGAGTTAGTTTCCGAATCTGCAACA ACTTGTGTTGGTTCTGGTACAACCGTTGTGCTGCTATCACTAATAAGACCCATCGATTGCTGNACGAGTGGGTTAGACAGTAGTCGGAAGCACAAATTGCGAATGTCCTTGTAAGTTGTGTGCTTCTTTCGAAAGTCCTCTAAATCGTTTGACAGTGGGACAGGTNACTGAATTC ]
[+] EMBL CD183060 [ CGGTAGGTGAGTTAGTTTCCGAATCTGCAACA ACTTGTGTTGGTTCTGGTACAACCGTTGTGCTGCTATCACTAATAAGACCCATCGATTGCTGGACGAGTGGGTTAGACAGTAGTCGGAAGCACAAATTGCGAATGTCCTTGTAAGTTGTGTGCTTCTTTCGAAAGTCCTCTAAATCGTTTGACAGTGGGACAGGT ACTGAATTCCCATTCAT ]
[+] EMBL CD200813 [ TTTCCAAATCTGCAACATTCTTGTGTTGGTTCTGG ACAACCGTTGTGCTGCTATCACTAATAAGACCCATCGATTGCTGGACGAGTGGGTTACACAGTAGTCGGAAGCACAAATTGCGAATGTCCTTGTAAGTTGTGCGCTTCTTTCGAAAGTCCTCTAATTCGTTTGACAGTGGGACAGGT ACTGAATTCCCATCCATCAAATTGAAGGT ]
[-] EMBL CD188849 [ GTGCTGCTATCACTAATAAGACCCATCGATTGCTGGACGAGTGGGTTAGACAGTAGTCGGAAGCACAAATTGCGAATGTCCTTGTAAGTTGTGTGCTTCTTTCGAAAGTCCTCTAAATCGTTTGACAGTGGGACAGGT ACTGAATTCCCATTCATCAAATTGAAGGTGCTTGTAGCAACAGTCTTAAGATCTTCTCGTGCACGTAAGAAATTGGGAACAGAAGATAGAGCTGAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11237#0 TTTTTTTTTTTTTTTTTTTTGATCATTTTAAAAATGTATTACAATCTTTGGATCACTAAT 60
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 ACTTTTTAACTGTAAGCTTGGCATGCCAAAATTCAAACATAAGATTGTTGTTAAGAGAAA 120
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 GCTAGTCACACATTTTCCACGTCGCACGAAACAATATGGTACCAAATTATACATGCGATT 180
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 GGTCACTGAACCAAAGAAATGCAATATCAACAAACAAAGACCATAGGCTACAGCCATCAG 240
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 CTATAGATAAAGTTAAGCAATAAACCGGGCTTGATCAATACGACAATTAGTAAGTAGGCT 300
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 GAGCAAATGCAGTAGTCATTCCTCGATGAGCGCCACCACGACCTGGATGGGCACCGAAAT 360
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 TCCCACCACCGCCCCGCTGACCTGTATTGCGTCTTGGACCACCACTTCCACGGCCTCGAT 420
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 TTTCATTTGGAATACGGCCACGTAAACCAACTTTGGGATTTCCATGCTGGAAATTTGAAT 480
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 CAGGTTGTTCGGACTCACGAGAGTTTTCATCCATCGTGCGGTCAGTCTTTTTAGAGTTTA 540
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 TATTATCTACGACTGCTGGTCGATTAAAACCTGTATGTACTTGTCCGGCTCTTCGAACAG 600
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 AATCCGCATATGAAATTGGTTTGTGTACATTGATATTTGTCTCATGCTCATCCTGAGATA 660
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 ATATTGATTTAAAAGATGTAGTTTGATTGACATTGTCCGGTGACAAAGATGATGAACTTC 720
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 TTCCGAATAATTCAATCTTTGAGTGTTCAACTTCTGGAATATTTAAAACATATTGTTGGT 780
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 CTATCCTTGTAACCAAAGAACGGTCAATGTTATCTTCAATACTATGATTACTGAAACAAG 840
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 AAACACTCGTTTTATTAGGTAATTGATTAACAGGCATAACGTCTTCATAGTTTGTTGGAG 900
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 GTTCGGCCGTGATATGCGAATGGTCGACTCTAGAAGCCTGGATAAAGTTGAACGTACTAT 960
consensus_11237#1 ------------------AATGGTCGACTCTAGAAGCCTGGATAAAGTTGAACGTACTAT 42
******************************************
consensus_11237#0 TGAGTGGTCGGATGACTTGATCCACCGGTTCATCTGAAGTTGTAACAGAAGAGTGCCCAC 1020
consensus_11237#1 TGAGTGGTCGGATGACTTGATCCACCGGTTCATCTGAAGTTGTAACAGAAGAGTGCCCAC 102
************************************************************
consensus_11237#0 CAATTGTTGTGAATTCATTATAGGGAACAGTAGGCACATCAGTGGGACCTGATAGGCCGG 1080
consensus_11237#1 CAATTGTTGTGAATTCATTATAGGGAACAGTAGGCACATCAGTGGGACCTGATAGGCCGG 162
************************************************************
consensus_11237#0 TAGGTGAGTTAGTTTCCGAATCTGCAACAACTTGTGTTGGTTCTGGTACAACCGTTGTGC 1140
consensus_11237#1 TAGGTGAGTTAGTTTCCGAATCTGCAACAACTTGTGTTGGTTCTGGTACAACCGTTGTGC 222
************************************************************
consensus_11237#0 TGCTATCACTAATAAGACCCATCGATTGCTGGACGAGTGGGTTAGACAGTAGTCGGAAGC 1200
consensus_11237#1 TGCTATCACTAATAAGACCCATCGATTGCTGGACGAGTGGGTTAGACAGTAGTCGGAAGC 282
************************************************************
consensus_11237#0 ACAAATTGCGAATGTCCTTGTAAGTTGTGTGCTTCTTTCGAAAGTCCTCTAAATCGTTTG 1260
consensus_11237#1 ACAAATTGCGAATGTCCTTGTAAGTTGTGTGCTTCTTTCGAAAGTCCTCTAAATCGTTTG 342
************************************************************
consensus_11237#0 ACAGTGGGACAGGTACTGAATTCCCATTCATCAAATTGAAGGTGCTTGTAGCAACAGTCT 1320
consensus_11237#1 ACAGTGGGACAGGTACTGAATTCCCATTCATCAAATTGAAGGTGCTTGTAGCAACAGTCT 402
************************************************************
consensus_11237#0 TAAGATCTTCTCGTGCACGTAAGAAATTGGGAACAGAAGATAGAGCTGAAGAACTAACTC 1380
consensus_11237#1 TAAGATCTTCTCGTGCACGTAAGAAATTGGGAACAGAAGATAGAGCTGAAGAACT--CCT 460
******************************************************* *
consensus_11237#0 CAGGCCAATTATCCACTACGGGCGGTGTTAATATATCTCGTACGGCGTCTAACAACTTAA 1440
consensus_11237#1 CGTGCCGATTCTGGCCTCGAGGCCAATTCCC----------------------------- 491
* *** *** * ** *** *
consensus_11237#0 GGTTGTTTTCTGATGAAGATTTTGTGACGGCTGAACGGACTGTCGGAATGTCCAAAGAAG 1500
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 CAAAAAAACGTTCCAAACACATGTGGATACTTAAATACGAAAGAGTATATTTCTCATGTT 1560
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 CAGCTTCCAGTTGGGACATTTGCTTACCAACGACTGACTCCATATTCGACAAGAGATCCT 1620
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 TCGTCTGTGCCACAATCTCTTGTACAAACGAGATGTTCTGAACCACACCATCATAGCTTT 1680
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 CGACGGCTTTCTTTTGTTCATCTTTCAGGACTTCACCTTTCTGCAGTTTTTCGCGATAAC 1740
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 CATCTAGCTTACTCTTTCTTTTTCCAAGATTCCTTTGTCTTCGCTCAAGATTCGACAAGA 1800
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 ACTGTCTAACTAACTCACATGGAGAATCACACTCAAGCATGCCTTTAACGCCGGTCACAA 1860
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 AACAGTTCAAAAATTCCAATAGTCCGTTCAGCCGTCACAAAATCTTCATCAGAAAACAAC 1920
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 CTTAAGTTGTTAGACGCCGTACGAGATATATTAACACCGCCCGTAGTGGATAATTGGCCT 1980
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 GGAGTTAGTTCTTCAGCTCTATCTTCTGTTCCCAATTTCTTACGTGCACGAGAAGATCTT 2040
consensus_11237#1 ------------------------------------------------------------
consensus_11237#0 AAGA 2044
consensus_11237#1 ----
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||