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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11282#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 627 fasta sequence
[TCGAGGGCCANAATTCGGCACGAGGGGTGGCAG-GAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTGTCATATCGCTAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA]
[+] EMBL CD080421 [TCGAGGGCCANAATTCGGCACGAGGGGTGGCAGNGAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTG ]
[+] EMBL CD081817 [ gaGGCCTTAATTCGGCACCAG GGCAG GAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATTAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTG ]
[+] EMBL CD080003 [ ccaagnaAATTCGGCACGAGANNNGGCAG GAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTG ]
[-] EMBL CD074335 [ TGGCAG GAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTGT ]
[-] EMBL CD074513 [ TGGCAG GAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTGT ]
[-] EMBL CD075386 [ CAG GAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATTAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTGT ]
[-] EMBL CD075547 [ CAG GAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATTAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAGTAGATT ]
[-] EMBL CD183322 [ CAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGA ]
[-] EMBL CD183678 [ CAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGA ]
[-] EMBL CD075415 [ TTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTGT ]
[-] EMBL BF936114 [ AGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTGTCATATCGCTAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA]
consensusID : consensus_11282#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 532 fasta sequence
[GAGCCATTAATTCGGCACGAGGATTTCCANAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGAT-GGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTA-GATTAATTCACAAG-AACTTAA-GAACTAAATAGGGTA-GAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTG]
[+] EMBL CD081591 [GAGCCATTAATTCGGCACGAGGATTTCCANAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGAT GGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTA GATTAATTCACAAG AACTTAA GAACTAAATAGGGTA GAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTG]
[-] EMBL CD194094 [ CAGG TTGATGGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATNGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTA GATTAATTCACAAG AACTTAA GAACTAAATAGGGTA GAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGT ]
[-] EMBL CD135290 [ GAT GGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTA GATTAATTCACAAG AACTTAA GAA ]
[-] EMBL CD136577 [ atacgGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTA GATTAATTCACAAG AACTTAA GAACTAAATAGGGTA GAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGT ]
[+] EMBL CD194086 [ TGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTA GATTAATTCACAAG AACTTAA GAACTAAATAGGGTA GAATCACTGTGACTAGAGTCCGTTTCTGGTTNGGACTGTTTTCAATTTCGTat ]
[-] EMBL CD136562 [ ATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTA GATTAATTCACAAG AACTTAA GAACTAAATAGGGTA GAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGT ]
[-] EMBL CD135073 [ GGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGACTATACCATTA GATTAATTCACAAG AACTTAA GAA ]
[-] EMBL CD087915 [ CAACCCGTCCAGACATCNCCACCTTCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTA GATTAATTCACAAG AACTTAA GAACTAAATAGG ]
[+] EMBL SM7681 [ CCGTCCAGACATCCCCACCTTCAGATCNATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTAGGATTAATTCACAAGNAACTTAAGGAACTAAATAGGGTAGGAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTG]
[-] EMBL CD087873 [ ATCCNCACTATCAGATCAATATCAGTCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTA GATTAATTCTCAAG AACTTAA GAACTAAATAGG ]
[+] EMBL CD193854 [ GAACTTATTCGACGCGCGCAATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATTA GATTAATTCACAAG AGCTTAA GAACTAAATAGGGTA GAATCACTGTGACTAGAGTCCGTTTCTGGTTGGAACTG ]
consensusID : consensus_11282#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 24 consensus length = 445 fasta sequence
[ATTGATGAAGGGTGTAGCTATTTGTTTATCCTCATCTGTGACCTTGTGGCAGGAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC-CCGTCCAGACA-TCCCCACC-TTCAGAT-CAATATCAG-TCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGC-AATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAG]
[+] EMBL CD189444 [ATTGATGAAGGGTGTAGCTATTTGTTTATCCTCATCTGTGACCTTGTGGCAGGAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATATCAG TCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGC AATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAG]
[+] EMBL CD178971 [ TGTTTATCCTCATCTGTGACCTTGTGGCAGGAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCA ]
[-] EMBL CD188310 [ CATCTGTGACCTTGTGGCAGGAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATATCAG TCTCC ]
[+] EMBL CD133197 [ CTTGTGGCAGGAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATATCAG TCTCCATGTCAATACTAAGTCGATGAACTTATTCGATGCGCGC AATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAG]
[-] EMBL CD097450 [ TTGTGGCAGGAAGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAGGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAA ]
[+] EMBL CD201419 [ TTGTGGCAGGAAGTCCATCCACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGAC ]
[-] EMBL BG932396 [ AGTCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTcccc ]
[-] EMBL BG932379 [ TCCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCGCAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCtt ]
[+] EMBL CD133114 [ CCATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCTTCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGCTCAccc ]
[-] EMBL CD186499 [ ATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGACCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGA ]
[+] EMBL CD170140 [ TCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATA ]
[+] EMBL CD170142 [ TCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCCGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATA ]
[+] EMBL CD136612 [ TTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACGGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATATCAG TCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAAACCTC AAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAA ]
[+] EMBL CD177749 [ TTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTAGACAGCCAGGTTTGATGGG ]
[+] EMBL CD177714 [ TTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGC ]
[-] EMBL BG931661 [ GCCTCGAAGGGGATCTAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCTAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCTCAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGAC ]
[-] EMBL CD072462 [ TAGTCCTTCAAGAGTTTCGTCGCGTCCACGTGCAAGTTTGCCAGCTCGTGCACCACCATCTGCTGTTGCACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATATCAG TCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCG ]
[-] EMBL CD087830 [ AACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAACCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TC ]
[+] EMBL CD062843 [ TGATGGGACAGTTGGCAGCTACAGCCGGGGGTGTGGCTATTGATTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACACCGTCCAAACATTCCCCACCATTCAGGTGCAATATCAGCTCTCCATGTCAATACCAAGTCGATG ]
[+] EMBL CD136534 [ GGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATATCAG TCTCCATGCCAATACCAAGCCGATGAACTTATTCGATGCGCGC AATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTAAAAG]
[+] EMBL CD193915 [ GGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATATCAG TCTCCATGTCAATACCA ]
[-] EMBL CD136334 [ GTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATATCAG TCTCCATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGC AATCTCAAAGTGATATAAGTGCTTGTAGTGGCTTCTCTGAAGCTCTA ]
[-] EMBL CD200743 [ TTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATATCAG TCTCCATG ]
[-] EMBL CD192603 [ TTGTCAAGTGGAGCTGGTAGCAATCCTGCACAAC CCGTCCAGACA TCCCCACC TTCAGAT CAATATCAG TCTCCATGTCAATACCAAGTCGATG ]
consensusID : consensus_11282#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 234 fasta sequence
[AGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCTTCC]
[-] EMBL BG932446 [AGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCGGGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCTTCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11282#0 ---------------------TCGAGGGCCANAATTCGGCACGAGGGGTGGCAGGAAGTC 39
consensus_11282#1 ------------------------------------------------GAGCCATTAATT 12
consensus_11282#2 ATTGATGAAGGGTGTAGCTATTTGTTTATCCTCATCTGTGACCTT--GTGGCAGGAAGTC 58
consensus_11282#3 ------------------------------------------------------------
consensus_11282#0 CATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAA 99
consensus_11282#1 CGGCACGAGGATTTCCANAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAA 72
consensus_11282#2 CATCAACTTAATTTCCAGAAATCTTGAACGCAATGCCTCGAAGGGGATCTAGTCCTTCAA 118
consensus_11282#3 ----------------------------------------------AGCTACAGCCGGGG 14
* *** *
consensus_11282#0 GAGTTTCGTCGCGTCCACGTGCAAGTT-TGCCAGCTC--GTGCACCACCATCTGCTGTTG 156
consensus_11282#1 GAGTTTCGTCGCGTCCACGTGCAAGTT-TGCCAGCTC--GTGCACCACCATCTGCTGTTG 129
consensus_11282#2 GAGTTTCGTCGCGTCCACGTGCAAGTT-TGCCAGCTC--GTGCACCACCATCTGCTGTTG 175
consensus_11282#3 GTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAGCTG 74
* ** * ** ** ** ** ** * * * * *** ** ** * **
consensus_11282#0 CACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCG 216
consensus_11282#1 CACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCG 189
consensus_11282#2 CACAGCCTCCAGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCG 235
consensus_11282#3 GTAGCAATCCTGCACAACCTCGACAGCCAGGTTTGATGGGACAGATGGCAGCTACAGCCG 134
*** *************************************************
consensus_11282#0 GGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAG 276
consensus_11282#1 GGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAG 249
consensus_11282#2 GGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAG 295
consensus_11282#3 GGGGTGTGGCTATTGGTTCAGTTGTTGGTCACGCTATCACAGGAGCATTGTCAAGTGGAG 194
************************************************************
consensus_11282#0 CTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTC 336
consensus_11282#1 CTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTC 309
consensus_11282#2 CTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCCACCTTCAGATCAATATCAGTCTC 355
consensus_11282#3 CTGGTAGCAATCCTGCACAACCCGTCCAGACATCCCTTCC-------------------- 234
************************************ **
consensus_11282#0 CATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTG 396
consensus_11282#1 CATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTG 369
consensus_11282#2 CATGTCAATACCAAGTCGATGAACTTATTCGATGCGCGCAATCTCAAAGTGATATAAGTG 415
consensus_11282#3 ------------------------------------------------------------
consensus_11282#0 CTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATT 456
consensus_11282#1 CTTGTAGTGGCTTCTCTGAAGCTCTAAAAGAATGCAGTCGCCAGTACGGATTATACCATT 429
consensus_11282#2 CTTGTAGTGGCTTCTCTGAAGCTCTAAAAG------------------------------ 445
consensus_11282#3 ------------------------------------------------------------
consensus_11282#0 AGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGT 516
consensus_11282#1 AGATTAATTCACAAGAACTTAAGAACTAAATAGGGTAGAATCACTGTGACTAGAGTCCGT 489
consensus_11282#2 ------------------------------------------------------------
consensus_11282#3 ------------------------------------------------------------
consensus_11282#0 TTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTGTCATATCGCTAAAAAAA 576
consensus_11282#1 TTCTGGTTGGAACTGTTTTCAATTTCGTGTTCAAAATAGATTG----------------- 532
consensus_11282#2 ------------------------------------------------------------
consensus_11282#3 ------------------------------------------------------------
consensus_11282#0 AAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA 627
consensus_11282#1 ---------------------------------------------------
consensus_11282#2 ---------------------------------------------------
consensus_11282#3 ---------------------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||