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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11305#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 48 consensus length = 1011 fasta sequence
[ATAAACTG-TTTTTTAAA-GGTCACAACATTACTGACGAACGAAACACTAAAGCAAAAT-GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC-AACT-GGGAAA-GAAGAGAAAATC-AAG-AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT-TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA--GTGTTCTCACTTTGTACAGTAAACTTTCAATCTTCATATGTGATTTACAGATATTTCATGAGTAAAAACTATGTGTCCACTTCAAAAATTTGCGTGGAATACTGACTGATAGAATACGCAAAAGAACATGAACATGGAAAGACCTTGAAGAGTGAACGAGTATATAACGGAAAAACTGAAATGCATTTTGTTTTCAAGGATGCATTCGGACGCGAGAGCAATAATATATATATCGACTGGGACAAAAAACGTCATTTGACGAAGAGAATATACAAAAAAAGGCTCATAATGAAAGTATTGAAATATGGATTGAACTGTACGATGAGAAAAACATTAATCACAATTCTTTTTTGGAAGTCGCACATTTTTTATATGATGAATATGCTCCGTAATAATGCTGTATACAAGAATTATACAGAATATCAGGAATAAGAATGAAAAGACAATCTTATGATGTTTTCTCTGTCGAACCCCATGGACAATATTAGTGTTGTACACTTTTGCGTGTGTGAAAGGAACAAACAATCTTACAAATAAAATTGATTAGCGAGCTGCA-CAAACATTACCATTGTAGAGCAATGGTAATATTAAGAGAAATTGTTGAGATAAGTATACAAACGAAAGACACAACACAATCATATCTAATTGAA]
[-] EMBL CD078440 [ATAAACTG TTTTTTAAA GGTCACAACATTACTGACGAACGAAACACTAAAGCAAAAT GGATTTGCCAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT ATTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTCTCACTTTGTACAGTAAACTTTCAATCTTCATATGTGATTTACAGATATTTCATGAGTAAAAACTATGTGTCCACTTCAAAAATTTGCGTGGAATACTGACTGATAGAATACGCAAAAGAACATGAACATGGAAAGACCTTGAAGAGTGAACGAGTATATAACGGAAAAACTGAAATGCATTTTGTTTTCAAGGATGCATTCGGACGCGAGAGCAATAATATATATATCGACTGGGACAAAAAACGTCATTTGACGAAGAG ]
[+] EMBL AA999555 [ aAAACTGTTTTTTTAAAGGGTCACAACATTACTGACGAACGANACACTAAAGCAAAATGGGATTTGACAAATCANACAAATTAGTAAGGAAAACAAACTGGGGAAAGGAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGAGGAAACAATGCAACAACACATAAGGGTGAGCATTTAGTGAAAGAATGAGGAAGGAACACTTTAAAGTGTGCCc ]
[+] EMBL CD143705 [ ACCTTACTGACGAACGAAACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[-] EMBL CD138368 [ cgACTGACGAACGAAACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAGGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGAGGAAACAATGCAACAACACGTAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAA ]
[+] EMBL CD159518 [ TGACGAACGAAACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC GACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATATATTTTTTAAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTCTCACTTTGTACAGTAAACTTTCAATCTTCATATGTGATTTACAGATATTTCATGAGTAAAAACTATGTGTCCACTTCAAAAATTTGCGTGGAATACTGACTGATAGAA ]
[+] EMBL CD143719 [ AAACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGGGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTTAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143818 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAGCAGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAGACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GAGTTC ]
[+] EMBL CD143723 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATATTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTCTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143803 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTATTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143848 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGAGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAGGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143836 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAGAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143744 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTATTAGGGAAAAC ATCT GGGAAA GAAGAGAAAATCAAAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCTTTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAGAACAGGTAATGAGAGTAACAAATACACAAAATAGTTTATGCGAATA TTTTTTTAAAAACACAACTAACTAATTGAATATTGGTATA GTGCTC ]
[+] EMBL CD143812 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAACCACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143869 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCCCCTAACATACACAGAAAGTAAATTGTGAACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTGATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143768 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAGCAAGTAACGAGAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143823 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCCCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACGCATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATCGTTATA GTGTTC ]
[+] EMBL CD143825 [ ACACTAAAGCAAAAT GGATTTGACAAAACTAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC GAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAGGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143717 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAGATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGATTAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143777 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAGTTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143775 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGGGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGGGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143727 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143735 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143754 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143759 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143826 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143833 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143877 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143711 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGG AAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAGATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143784 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGG AAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCGTTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143764 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGG AAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143853 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGG AAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATA TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143863 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAACC AAG AGAAAAACCTCCTAACATACACAGTAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAG AAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GGGTT ]
[+] EMBL CD143747 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAGGGATGAGCTTTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGGCCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACATGTAATGAAGGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAA ]
[+] EMBL CD143722 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[+] EMBL CD143704 [ ACACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTC ]
[-] EMBL CD143763 [ CACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC GAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTGCGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTCT ]
[-] EMBL CD143707 [ CACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATCTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGT AACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTCT ]
[-] EMBL CD143879 [ CACTAAAGCAAAAT GGATTTGTCAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAACTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAAATAATTGAATATTGTTATA GTGTTCT ]
[-] EMBL CD143769 [ CACTAAAGCAAAAT GGATTTGACAGAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTCT ]
[-] EMBL CD143730 [ CACTAAAGCAAAAT GGATTTGTCAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAAGTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTCT ]
[-] EMBL CD143829 [ CACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC GAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTCT ]
[-] EMBL CD143874 [ CACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAATACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTATATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTCAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTCT ]
[-] EMBL CD143731 [ CACTAAAGCAAAAT GGATTTGTCAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTCT ]
[-] EMBL CD143855 [ tACTAAAGCAAAAT GGATTTGACAAAACAAACAAATTAGTAAGGAAAAC AACT GGGAAA GAAGAGAAAATC AAG AGAAAAACCCCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACGATGCAACAACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTTATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACACAAAATAATTTATGTGAATAT TTTTTTTAAAAACACAACTAACTAATTGAATAATGTTATA GTGTTCT ]
[-] EMBL CD159467 [ tgAAAAACACAACTAACTAATTGAATATTGTTATA GTGTTCTCACTTTGTACAGTAAACTTTCAATCTTCATATGTGATTTACAGATATTTCATGAGTAAAAACTATGTGTCTACTTCAAAAATTTGCGTGGAATACTGACTGATAGAATACGCAAAAGAACATGAACATGGAAAGACCTTGAAGAGTGAACGAGTATATAACGGAAAAACTGAAATGCATTTTGTTTTCAAGGATGCATTCGGACGCGAGAGCAATAATATATATATCGACTGGGACAAAAAACGTCATTTGACGAAGAGAATATACAAAAAAAGGCTCATAATGAAAGTATTGAAATA ]
[-] EMBL CD138267 [ gTATANNGTGTTCTCACTTNGTACAGTAAACTNTCAATCTTCATATGTGATTTACAGATATTTCATGAGTAAAAACTATGTGTCCACTTCAAAAATTTGCGTGGAATACTGACTGATAGAATACGCAAAAGAACATGAACATGGAAAGACCTTGAAGAGTGAACGAGTATATAACGGAAAAACTGAAATGCATTTTGTTTTCAAGGATGCATTCGGACGCGAGAGCAATAATATATATATCGACTGGGACAAAAAACGTCATTTGACGAAGAGAATATACAAAAAAAGGCTCATAATGAAAGTATTGAAATATGGATTGAACTGT ]
[-] EMBL CD083710 [ ACGAGTATATAACGGAAAAACTGAAATGCATTTTGTTTTCAAGAATGCATTCGGACGCGAGAGCAATAATATATATATCGACTGGGACAAAAAACGTCATTTGACGAAGAGAATATACAAAAAAAGGCTCATAATGAAAGTATTGAAATATGGATTGAACTGTACGATGAGAAAAACATTAATCACAATTCTTTTTTGGAAGTCGCACATTTTTTATATGATGAATATGCTCCGTAATAATGCTGTATACAAGAATTATACAGAATATCAGGAATAAGAATGAAAAGACAATCTTATGATGTTTTCTCTGTCGAACCCCATGGACAATATTAGTGTTGTACACTTTTGCGTGTGTGAAAGGAACAAACAATCTTACAAATAAAATTGATTAGCGAGCTGCA CAAACATTACCATTGTAGAGCAATGGTAATATTAAGAGAAATTGTTGAGATAAGTATACAAACGAAAGACACAACACAATCATATCTAATTGAA]
[-] EMBL CD078159 [ GCACCAAACATTACCATTGTAGAGCAATGGTAATATTAAGAGAAATTGTTGAGATAAGTATACAAACGAAAGACACAACACAATCATATCTAATTGAA]
consensusID : consensus_11305#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 324 fasta sequence
[CATTAAAGCAAAATGGATTTGCCAAACCAACCAAATTAGTAAGGAAACCACCTGGGAAAGAAGAGAAATTCAAGAGAAAACCTTCTTACCATCCCCAGAAAGTAAATTGTGTCCGATAGGAGCGGAACCAATGCACCACCCCATAAGGATGAGCATTTAGTGAAAGAACGAGGAAGGCCCCCTTTAAGGGGTCCCTTATTTTTAAATTAATTCAGGTAACCAAGAGAAGAAACCAAGTAATGAAAGTACCAAATCCCCAAAATAATTTATGTGAATATTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATAGTGTTCT]
[-] EMBL CD143799 [CATTAAAGCAAAATGGATTTGCCAAACCAACCAAATTAGTAAGGAAACCACCTGGGAAAGAAGAGAAATTCAAGAGAAAACCTTCTTACCATCCCCAGAAAGTAAATTGTGTCCGATAGGAGCGGAACCAATGCACCACCCCATAAGGATGAGCATTTAGTGAAAGAACGAGGAAGGCCCCCTTTAAGGGGTCCCTTATTTTTAAATTAATTCAGGTAACCAAGAGAAGAAACCAAGTAATGAAAGTACCAAATCCCCAAAATAATTTATGTGAATATTTTTTTAAAAACACAACTAACTAATTGAATATTGTTATAGTGTTCT]
consensusID : consensus_11305#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 267 fasta sequence
[AGAAGAGAAAATCAAGAGAATAACCTCTTTACATACACAGAAAGTAAATTGTGTGCGATAGGAGCGGGAACAATGCATCAACACATAAGGATGAGCACTTAGTGAAAGAAAGAGGAAGGACCACTATAATGTGTTCCTTATTTGTAAAATAAGTCAAGTAGACAAGAGAAGAGAGCTAGTAATGAAAGTAACAAATACGCGAAATAATTTATGTGAATATTTTTTTTAAAAGCACAACTAACTAATTGAATATTGTTATAGTGTTCT]
[-] EMBL CD143793 [AGAAGAGAAAATCAAGAGAATAACCTCTTTACATACACAGAAAGTAAATTGTGTGCGATAGGAGCGGGAACAATGCATCAACACATAAGGATGAGCACTTAGTGAAAGAAAGAGGAAGGACCACTATAATGTGTTCCTTATTTGTAAAATAAGTCAAGTAGACAAGAGAAGAGAGCTAGTAATGAAAGTAACAAATACGCGAAATAATTTATGTGAATATTTTTTTTAAAAGCACAACTAACTAATTGAATATTGTTATAGTGTTCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11305#0 ATAAACTGTTTTTTAAAGGTCACAACATTACTGACGAACGAAACACTAAAGCAAAATGGA 60
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 -------------------------------------------CATTAAAGCAAAATGGA 17
consensus_11305#0 TTTGACAAAACAAACAAATTAGTAAGGAAAACAACTGGGAAAGAAGAGAAAATCAAGAGA 120
consensus_11305#2 -----------------------------------------AGAAGAGAAAATCAAGAGA 19
consensus_11305#1 TTTGCCAAACCAACCAAATTAGTAAGGAAACCACCTGGGAAAGAAGAGAAATTCAAGAGA 77
********** ********
consensus_11305#0 AAAACCTCCTAACATACACAGAAAGTAAATTGTGTACGATAGGAGCGGAAACAATGCAAC 180
consensus_11305#2 ATAACCTCTTTACATACACAGAAAGTAAATTGTGTGCGATAGGAGCGGGAACAATGCATC 79
consensus_11305#1 AAACCTTCTTACCATCCCCAGAAAGTAAATTGTGTCCGATAGGAGCGGAACCAATGCACC 137
* * * ** * *** * ***************** ************ * ******* *
consensus_11305#0 AACACATAAGGATGAGCATTTAGTGAAAGAATGAGGAAGGACCACTTTAATGTGTTCCTT 240
consensus_11305#2 AACACATAAGGATGAGCACTTAGTGAAAGAAAGAGGAAGGACCACTATAATGTGTTCCTT 139
consensus_11305#1 ACCCCATAAGGATGAGCATTTAGTGAAAGAACGAGGAAGGCCCCCTTTAAGGGGTCCCTT 197
* * ************** ************ ******** ** ** *** * ** ****
consensus_11305#0 ATTTTTAAATTAATTCAAGTAAACAAGAGAAGAAAACAAGTAATGAAAGTAACAAATACA 300
consensus_11305#2 ATTTGTAAAATAAGTCAAGTAGACAAGAGAAGAGAGCTAGTAATGAAAGTAACAAATACG 199
consensus_11305#1 ATTTTTAAATTAATTCAGGTAACCAAGAGAAGAAACCAAGTAATGAAAGTACCAAATCCC 257
**** **** *** *** *** ********** * * ************* ***** *
consensus_11305#0 CAAAATAATTTATGTGAATATTTTTTTTAAAAACACAACTAACTAATTGAATATTGTTAT 360
consensus_11305#2 CGAAATAATTTATGTGAATATTTTTTTTAAAAGCACAACTAACTAATTGAATATTGTTAT 259
consensus_11305#1 CAAAATAATTTATGTGAATATTTTTTT-AAAAACACAACTAACTAATTGAATATTGTTAT 316
* ************************* **** ***************************
consensus_11305#0 AGTGTTCTCACTTTGTACAGTAAACTTTCAATCTTCATATGTGATTTACAGATATTTCAT 420
consensus_11305#2 AGTGTTCT---------------------------------------------------- 267
consensus_11305#1 AGTGTTCT---------------------------------------------------- 324
********
consensus_11305#0 GAGTAAAAACTATGTGTCCACTTCAAAAATTTGCGTGGAATACTGACTGATAGAATACGC 480
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 ------------------------------------------------------------
consensus_11305#0 AAAAGAACATGAACATGGAAAGACCTTGAAGAGTGAACGAGTATATAACGGAAAAACTGA 540
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 ------------------------------------------------------------
consensus_11305#0 AATGCATTTTGTTTTCAAGGATGCATTCGGACGCGAGAGCAATAATATATATATCGACTG 600
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 ------------------------------------------------------------
consensus_11305#0 GGACAAAAAACGTCATTTGACGAAGAGAATATACAAAAAAAGGCTCATAATGAAAGTATT 660
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 ------------------------------------------------------------
consensus_11305#0 GAAATATGGATTGAACTGTACGATGAGAAAAACATTAATCACAATTCTTTTTTGGAAGTC 720
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 ------------------------------------------------------------
consensus_11305#0 GCACATTTTTTATATGATGAATATGCTCCGTAATAATGCTGTATACAAGAATTATACAGA 780
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 ------------------------------------------------------------
consensus_11305#0 ATATCAGGAATAAGAATGAAAAGACAATCTTATGATGTTTTCTCTGTCGAACCCCATGGA 840
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 ------------------------------------------------------------
consensus_11305#0 CAATATTAGTGTTGTACACTTTTGCGTGTGTGAAAGGAACAAACAATCTTACAAATAAAA 900
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 ------------------------------------------------------------
consensus_11305#0 TTGATTAGCGAGCTGCACAAACATTACCATTGTAGAGCAATGGTAATATTAAGAGAAATT 960
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 ------------------------------------------------------------
consensus_11305#0 GTTGAGATAAGTATACAAACGAAAGACACAACACAATCATATCTAATTGAA 1011
consensus_11305#2 ---------------------------------------------------
consensus_11305#1 ---------------------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||