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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11385#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 61 consensus length = 602 fasta sequence
[CATCTGTTATATTAGATATAAGTGAATAATAAACTTGTGCAAAAGCTGCCGGGTTAGAATAAAAATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG-CCTCTTCGTTCGA-CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT-CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC-CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT-CACCGGCCTCTTTCCTTAT-CTTCTTGAC-AACTGGCTCGTCATTACCGTTCTTAGCTTCATG-ATCTGCAACATCTTTGGCATCCACAGAC-TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG-TGTG-CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTTTCAAAGACAGCCAAATTNTGGCCCTGGAGG]
[+] EMBL CD073927 [CATCTGTTATATTATATATAAGTGAATAATAAACTTGTGCAAAAGCTGCCGGGTTAGAATAAAAATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTCCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTTTC ]
[-] EMBL CD079667 [ ATCTGTTATATTAGATATAAGTGAATAATAAACTTGTGCAAAAGCTGCCGGGTTAGAATAAAAATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTCCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTTTCACCTCGTGCCAAATTNTGGCCCTGGAGG]
[-] EMBL CD062870 [ AGATATAAGTGAATAATAAACTTGTGCAAAAGCTGCCGGGTTAGAATAAGAATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCATGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACT ]
[+] EMBL CD061395 [ CGGGTTAGAATAAAAATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCG TTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGACAAACTGGCTCGTCATTACCGTACTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGG ]
[+] EMBL CD178027 [ TTAGAATAAAAATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCG TTTTCGTTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATC ]
[+] EMBL BG932747 [ acTAGAATAAAAATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAG ]
[-] EMBL BG931073 [ tcAGAATAAAAATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTTGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGAg ]
[-] EMBL BG930610 [ tcAGAATAAAAATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGAt ]
[+] EMBL CD133678 [ AAATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CACCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCC ]
[-] EMBL CD189794 [ AATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACCGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCAT ]
[+] EMBL CD193420 [ TACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG ]
[+] EMBL CD122184 [ TGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATC ]
[+] EMBL CD122161 [ TGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATC ]
[+] EMBL CD190062 [ tgtcgTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTAGACTGAAGGCGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTACATTCTGATGTA CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTCCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCA ]
[+] EMBL CD062844 [ AGTGCATAAAAATGCCGAAGTTTAATCACTGGACCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTAC ]
[+] EMBL CD062859 [ AGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTAC ]
[+] EMBL CD062872 [ AGTGCATAAAAATGCCGCAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGGCATGTTCGCCGTTAC ]
[+] EMBL CD062955 [ GTGCATAAAAATGCCGAAGTTTAATCACTGGACCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTAC ]
[+] EMBL CD062880 [ GTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTAC ]
[-] EMBL CD062879 [ TGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTGACT ]
[-] EMBL CD062892 [ TGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACT ]
[+] EMBL CD062949 [ gaaGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTAC ]
[+] EMBL CD189909 [ AAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTNTCAAAGAC ]
[+] EMBL CD190054 [ AAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCGGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGTCCACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGACTTTCCTTTTCAACa ]
[+] EMBL CD189930 [ AAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTTTCAAAGAa ]
[+] EMBL CD189688 [ AAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCATCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCCTAGCTTCATGNATCTGC ACATCTTTGGCA CCACAGAC TTCCTTTTCAACTCTCNCATTTTCGACTCAACGGGAGTGACCTCA ]
[-] EMBL CD188621 [ AATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTTTCAAAGACA ]
[-] EMBL CD133331 [ AATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATCAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTT ]
[-] EMBL CD144667 [ TGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTT ]
[-] EMBL CD144560 [ TGCGAAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCC TTTCTGATTCGGAATCGACCCCATCGTCTGA TTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTT ]
[-] EMBL CD062873 [ CGAAGTTTAATCACTGG CCTCTTCGTTCAAGCTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGAC ]
[+] EMBL CD062862 [ GAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCCGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTAC ]
[+] EMBL CD062864 [ GAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTTACACCGACATGTTCGCCGCTAC ]
[+] EMBL CD062881 [ GAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGAT ]
[-] EMBL CD126044 [ AAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTac ]
[-] EMBL CD069516 [ GTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTGATGTGCCAGCGACAGACTCCATCTGAGACAGGTT ]
[+] EMBL CD062841 [ TTCGTTCGA CTACTTGTCGACTGAAGGAGCATAACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTATTCATCCTGATGTT CACCGACATGTTCGCCGTTAC ]
[-] EMBL CD145924 [ TCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTC ]
[+] EMBL CD190439 [ CCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGNCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCA ]
[-] EMBL CD190403 [ CTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTCCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC ]
[-] EMBL CD188098 [ CTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCGGCCACCGCCGATCTACTCTCCGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGC ]
[+] EMBL CD185053 [ CGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCA ]
[-] EMBL CD201542 [ GACCCATCG TTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAG ]
[+] EMBL CD197992 [ GTCTGATTTTTCATTCTGATGTT CACCGACACGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTT ]
[+] EMBL CD193575 [ GTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGNGCGTGCACCAACGTTTTTCAAGAC ]
[-] EMBL CD130789 [ TCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGC ]
[-] EMBL CD133948 [ TCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTG ]
[-] EMBL CD190852 [ TCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGAC ]
[-] EMBL CD190897 [ TCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGAC ]
[-] EMBL CD133939 [ TCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGC ]
[-] EMBL CD144280 [ TAGTGCC TTGGTGTC TGTGAGGCATCG CTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCA ]
[-] EMBL CD144252 [ TAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCA ]
[+] EMBL CD194509 [ TCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTTAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTAT ]
[-] EMBL CD194510 [ CTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTCCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATT ]
[-] EMBL CD194403 [ CTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATT ]
[-] EMBL CD194537 [ CTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATT ]
[-] EMBL CD194407 [ CTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTCCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCACCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATT ]
[-] EMBL CD132802 [ GCATCGTC TCGGGGCGCGTCGTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCCTCACCGGAGT CACCGGCCTCTTTCCTTATAAAAAAAAAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGga ]
[-] EMBL CD130143 [ ACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTTTCAAAGA ]
[-] EMBL CD142008 [ TTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTTTCAAAGACAaat ]
[-] EMBL CD142041 [ TTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTTTCAAAGACA ]
consensusID : consensus_11385#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 451 fasta sequence
[AACGGTAAGACTAAAAGCAGCAACTCAAGGTCTGAGGGCGAAGTCGTACTGCTGACTGGAGAGGGGTTTGACAGCAGTAAGGTGTTTCCTTCGGACAACCAGCATCTGCAACAATGCTGCCTTCTCACAAGGAGGGAGGCGGTTAGAAAAGATCAACCCTAAAAATGTCACGCCTCACCTTAGCTCACGGATTTCCGTCTCCGGAGGTAAGACCCTTTGAAGAACGAAGCTAATACGTCAAAAGCCTCCCACAAAAAGGCCGCGCGTGACCGGTTTCAGGCAATTGTACTTTGGGCTCTGCGGTCACGCTCCCAGGTCGTTAAGATCAACATTAATCCAACTTCCTTTTCAGGTCCCACAAGAAATACCCTTCCACGGTATGGGCAGCCGGGAAGTGATATTAGCCCTCATACACGTAACAGCACACGAGAACAATTTGGTCACATTCAAA]
[+] EMBL CD128183 [AACGGTAAGACTAAAAGCAGCAACTCAAGGTCTGAGGGCGAAGTCGTACTGCTGACTGGAGAGGGGTTTGACAGCAGTAAGGTGTTTCCTTCGGACAACCAGCATCTGCAACAATGCTGCCTTCTCACAAGGAGGGAGGCGGTTAGAAAAGATCAACCCTAAAAATGTCACGCCTCACCTTAGCTCACGGATTTCCGTCTCCGGAGGTAAGACCCTTTGAAGAACGAAGCTAATACGTCAAAAGCCTCCCACAAAAAGGCCGCGCGTGACCGGTTTCAGGCAATTGTACTTTGGGCTCTGCGGTCACGCTCCCAGGTCGTTAAGATCAACATTAATCCAACTTCCTTTTCAGGTCCCACAAGAAATACCCTTCCACGGTATGGGCAGCCGGGAAGTGATATTAGCCCTCATACACGTAACAGCACACGAGAACAATTTGGTCACATTCAAA]
consensusID : consensus_11385#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 165 fasta sequence
[TGTCTGGAAGAGCGAGCCATATGTCTGGCATGCATAAAAATGCCGAAGTTTAATCACTGGCCTCTTCGTTCGACTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTTTTCATTCTGATGTTCACCGACATGTTGGCCGTTAC]
[+] EMBL CD062874 [TGTCTGGAAGAGCGAGCCATATGTCTGGCATGCATAAAAATGCCGAAGTTTAATCACTGGCCTCTTCGTTCGACTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTTTTCATTCTGATGTTCACCGACATGTTGGCCGTTAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11385#0 CATCTGTTATATTAGATATAAGTGAATAATAAACTTGTGCAAAAGCTGCCGGGTTAGAAT 60
consensus_11385#2 ------------------------------------------------------------
consensus_11385#1 -AACGGTAAGACTAAAAGCAGCAACTCAAGGTCTGAGGGCGAAGTCGTACTGCTGACTGG 59
consensus_11385#0 AAAAATCGATAAAAATGTTACAAAAAGACA--TAAATGCCTGGAGTGCATAAAAATGCCG 118
consensus_11385#2 -------------TGTCTGGAAGAGCGAGC--CATATGTCTGGCATGCATAAAAATGCCG 45
consensus_11385#1 AGAGGGGTTTGACAGCAGTAAGGTGTTTCCTTCGGACAACCAGCATCTGCAACAATGCTG 119
* * * * ** ***** *
consensus_11385#0 AAGTTTAATCACTGGCCTCTTCGTTCGACTCCTTGTCGACTGAAGGTGCATCACCCTTTT 178
consensus_11385#2 AAGTTTAATCACTGGCCTCTTCGTTCGACTCCTTGTCGACTGAAGGTGCATCACCCTTTT 105
consensus_11385#1 CCTTCTCACAAGGAGGGAGGCGGTTAGAAAAGATCAACCCTAAAAATGTCACGCCTCACC 179
* * * * * *** ** * ** ** ** * **
consensus_11385#0 CTGATTCG-GAATCGGACCCATCGTCTGATTTTTCATTCTGATGTTCA--CCGACATGTT 235
consensus_11385#2 CTGATTCG-GAATCGGACCCATCGT------TTTCATTCTGATGTTCA--CCGACATGTT 156
consensus_11385#1 TTAGCTCACGGATTTCCGTCTCCGGAGGTAAGACCCTTTGAAGAACGAAGCTAATACGTC 239
* ** * ** * ** * ** * * * * * **
consensus_11385#0 CGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGG 295
consensus_11385#2 GGCCGTTAC--------------------------------------------------- 165
consensus_11385#1 AAAAGCCTCCCACAAAAAGGC-CGCGCGTGACCGGTTTCAGGCAATTGTACTTTG-GGCT 297
* *
consensus_11385#0 CATCGTCTTCGGTACCGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGT 355
consensus_11385#2 ------------------------------------------------------------
consensus_11385#1 CTGCGGTCACGCTCCCAGGTCGTTAAGATCAACATTAATCCAACTTCCTTTTCAGGTCCC 357
consensus_11385#0 GAGCCTTTTCGTCTTCATCGGTGTCACCGGCCTCTTTCCTTATCTTCTTGACAACTGGCT 415
consensus_11385#2 ------------------------------------------------------------
consensus_11385#1 ACAAGAAATACCCTTCCACGGTATGGGCAGCCGGGAAGTGATATTAGCCCTCATACACGT 417
consensus_11385#0 CGTCATTACCGTTCTTAGCTTCATGATCTGCAACATCTTTGGCATCCACAGACTTCCTTT 475
consensus_11385#2 ------------------------------------------------------------
consensus_11385#1 AACAGCACACGAGAACAATTTGGTCACATTCAAA-------------------------- 451
consensus_11385#0 TCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTGTGTGCAGCGACAGACT 535
consensus_11385#2 ------------------------------------------------------------
consensus_11385#1 ------------------------------------------------------------
consensus_11385#0 CCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTTTCAAAGACAGCCAAATTNTGGCC 595
consensus_11385#2 ------------------------------------------------------------
consensus_11385#1 ------------------------------------------------------------
consensus_11385#0 CTGGAGG 602
consensus_11385#2 -------
consensus_11385#1 -------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||