cluster # 3407

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Schistosoma mansoni
cluster # 3407 cluster # 3407 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3407#0 length = 92 sequences # 1

consensus_3407#1 length = 84 sequences # 1

consensusID : consensus_3407#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 92
fasta sequence

                              [CCCCCTNCCAATNCTGAATCAGTNCCTCCTATCTGGNAATCCAGTGACTGCGACGACAATAAAAGTACAAGGCCATCCGTCTCATTTTTGTC]

[+] EMBL CD126279             [CCCCCTNCCAATNCTGAATCAGTNCCTCCTATCTGGNAATCCAGTGACTGCGACGACAATAAAAGTACAAGGCCATCCGTCTCATTTTTGTC]




>consensus_3407#0
CCCCCTNCCAATNCTGAATCAGTNCCTCCTATCTGGNAATCCAGTGACTGCGACGACAAT
AAAAGTACAAGGCCATCCGTCTCATTTTTGTC

consensusID : consensus_3407#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 84
fasta sequence

                              [CACCCTGAATTCCATATCCTCCTATACTGAATCCAAACCGCCATGATGACAAAAATGAGACGGATGGCCTTGTACTTTTATGTC]

[+] EMBL CD126268             [CACCCTGAATTCCATATCCTCCTATACTGAATCCAAACCGCCATGATGACAAAAATGAGACGGATGGCCTTGTACTTTTATGTC]




>consensus_3407#1
CACCCTGAATTCCATATCCTCCTATACTGAATCCAAACCGCCATGATGACAAAAATGAGA
CGGATGGCCTTGTACTTTTATGTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3407#0      CCCCCTNCCAATNCTGAAT--CAGTNCCTCCTATCTGGNAATCCAGTGACTGCGACGACA 58
consensus_3407#1      ---------CACCCTGAATTCCATATCCTCCTATACTGAATCCAAACCGCCATGATGACA 51
                                *  ******  **   ********   * *  * *    *   ** ****

consensus_3407#0      ATAAAAGTACAAGGCCATCCGTCTCATTTTTGTC 92
consensus_3407#1      AAAATGAGACG-GATGGCCTTGTACTTTTATGTC 84
                      * **    **  *     *     * *** ****