Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 3955 cluster # 3955       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3955#0 length = 283 sequences # 2  
consensusID : consensus_3955#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 283
fasta sequence 
                              [TTTTATTACACACAAAAATAAATGACATTTAATTGGGTTTTTCTTTAAGAAATCTCTCTGTTCATTTTTTATAACAATAAAGTTCATAACACAAATCTAGTGTGAACAAATGAATTCAAATTAACAAAATATG-AAATAAGAAAAAGATGTAATTGTGTACACAAGCAATATGTTTGTAATTTTTGTGCATTCACTGATTGATTGTGCTTAAATTTAATTAGTGAGGATAATCTCCACTTTACTATTATTATTCTTAGCATGTGGCATTAATTCATTTACCGTG]

[+] EMBL AA999388             [TTTTATTACACACAAAAATAAATGACATTTAATTGGGTTTTTCTTTAAGAAATCTCTCTGTTCATTTTTTATAACAATAAAGTTCATAACACAAATCTAGTGTGAACAAATGAATTCAAATTAACAAAATATG AAATAAGAAAAAGATGTAATTGTGTACACAAGCAATATGTTTGTAATTTTTGTGCATTCACTGATTGATTGTGCTTAAATTTAATTAGTGAGGATAATCTCCACTTTACTATTATTATTCTTAGCATGTGGCATTAATTCATTTACCGTG]
[+] EMBL AA999416             [  TTATTACACACAAAAAT AATGACATTTAATTGGG TTTTCTTTAAGAAATCTCTCTGTTCATTTTTTATAACAATAAAGTTCATAACACAAATCTAGTGTGAACAAATGAATTCAAATTTACAAAATTTGAAAATAGGAAAAAGATta                                                                                                                                     ]




>consensus_3955#0
TTTTATTACACACAAAAATAAATGACATTTAATTGGGTTTTTCTTTAAGAAATCTCTCTG
TTCATTTTTTATAACAATAAAGTTCATAACACAAATCTAGTGTGAACAAATGAATTCAAA
TTAACAAAATATGAAATAAGAAAAAGATGTAATTGTGTACACAAGCAATATGTTTGTAAT
TTTTGTGCATTCACTGATTGATTGTGCTTAAATTTAATTAGTGAGGATAATCTCCACTTT
ACTATTATTATTCTTAGCATGTGGCATTAATTCATTTACCGTG

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)